Query 007040
Match_columns 620
No_of_seqs 277 out of 2705
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:35:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 7.3E-63 2.5E-67 522.4 34.9 314 17-337 26-345 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 7.6E-64 2.6E-68 527.7 25.4 299 31-337 13-328 (334)
3 4e5n_A Thermostable phosphite 100.0 3.7E-61 1.3E-65 506.4 32.4 314 19-339 2-328 (330)
4 4dgs_A Dehydrogenase; structur 100.0 1.6E-61 5.4E-66 511.3 27.7 310 16-337 27-340 (340)
5 3evt_A Phosphoglycerate dehydr 100.0 2.1E-61 7.3E-66 507.3 27.9 311 21-343 3-317 (324)
6 2pi1_A D-lactate dehydrogenase 100.0 6.1E-61 2.1E-65 505.6 25.2 312 21-341 2-332 (334)
7 3k5p_A D-3-phosphoglycerate de 100.0 9E-60 3.1E-64 509.0 32.6 314 12-338 8-332 (416)
8 3jtm_A Formate dehydrogenase, 100.0 2.3E-60 7.8E-65 504.4 26.4 306 35-344 33-348 (351)
9 3gg9_A D-3-phosphoglycerate de 100.0 1.9E-59 6.5E-64 497.5 32.4 317 21-343 4-339 (352)
10 3hg7_A D-isomer specific 2-hyd 100.0 5.4E-60 1.8E-64 496.7 25.9 308 19-343 5-317 (324)
11 4hy3_A Phosphoglycerate oxidor 100.0 3.7E-59 1.3E-63 497.3 31.8 313 18-340 27-351 (365)
12 1sc6_A PGDH, D-3-phosphoglycer 100.0 5.3E-59 1.8E-63 502.2 31.9 308 19-339 4-322 (404)
13 2yq5_A D-isomer specific 2-hyd 100.0 8.2E-59 2.8E-63 491.1 28.0 311 21-340 3-335 (343)
14 3pp8_A Glyoxylate/hydroxypyruv 100.0 1.3E-58 4.3E-63 484.6 27.8 271 56-342 38-315 (315)
15 1mx3_A CTBP1, C-terminal bindi 100.0 5.3E-58 1.8E-62 485.5 30.9 318 16-337 18-346 (347)
16 2j6i_A Formate dehydrogenase; 100.0 2.1E-58 7.2E-63 491.3 24.5 322 18-345 16-356 (364)
17 1j4a_A D-LDH, D-lactate dehydr 100.0 1.8E-57 6.2E-62 478.5 30.3 275 55-338 42-332 (333)
18 1dxy_A D-2-hydroxyisocaproate 100.0 2.2E-57 7.6E-62 478.0 28.5 275 55-339 40-331 (333)
19 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 2.7E-57 9.1E-62 478.2 28.8 307 18-334 25-334 (335)
20 2nac_A NAD-dependent formate d 100.0 3.7E-57 1.3E-61 486.1 28.0 279 55-337 85-366 (393)
21 1xdw_A NAD+-dependent (R)-2-hy 100.0 6.6E-57 2.3E-61 473.8 29.3 274 55-337 41-331 (331)
22 3ba1_A HPPR, hydroxyphenylpyru 100.0 6.2E-56 2.1E-60 467.3 33.5 310 16-337 20-333 (333)
23 2cuk_A Glycerate dehydrogenase 100.0 8E-56 2.7E-60 462.2 33.7 304 20-336 1-310 (311)
24 1gdh_A D-glycerate dehydrogena 100.0 1.6E-55 5.6E-60 461.3 33.6 308 20-334 2-316 (320)
25 1wwk_A Phosphoglycerate dehydr 100.0 9.4E-56 3.2E-60 460.7 30.0 301 19-329 3-307 (307)
26 2w2k_A D-mandelate dehydrogena 100.0 8.6E-56 3E-60 468.3 26.9 321 18-340 2-341 (348)
27 1qp8_A Formate dehydrogenase; 100.0 1.2E-55 4E-60 459.5 25.8 271 55-343 27-301 (303)
28 2dbq_A Glyoxylate reductase; D 100.0 1.1E-54 3.7E-59 457.2 28.9 315 19-339 2-324 (334)
29 2ekl_A D-3-phosphoglycerate de 100.0 6.3E-55 2.1E-59 455.6 26.9 268 55-332 42-312 (313)
30 2d0i_A Dehydrogenase; structur 100.0 4.9E-54 1.7E-58 452.4 29.1 312 19-340 2-321 (333)
31 2gcg_A Glyoxylate reductase/hy 100.0 1.8E-53 6E-58 447.0 32.1 315 18-338 7-330 (330)
32 3oet_A Erythronate-4-phosphate 100.0 7.8E-54 2.7E-58 458.1 26.5 276 21-330 5-284 (381)
33 3gvx_A Glycerate dehydrogenase 100.0 5E-53 1.7E-57 437.7 22.5 253 55-330 30-283 (290)
34 1ygy_A PGDH, D-3-phosphoglycer 100.0 1E-51 3.4E-56 458.9 33.0 311 19-339 4-316 (529)
35 2o4c_A Erythronate-4-phosphate 100.0 1.1E-51 3.7E-56 441.9 26.6 276 21-330 2-281 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 6.5E-33 2.2E-37 304.1 3.3 231 79-337 191-431 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 3.5E-33 1.2E-37 307.3 0.3 229 80-337 212-446 (494)
38 3d4o_A Dipicolinate synthase s 99.9 1.5E-25 5.2E-30 230.6 14.4 170 55-258 54-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 4.1E-22 1.4E-26 205.5 15.1 176 55-258 56-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 5.7E-23 2E-27 226.5 4.3 225 84-336 214-445 (494)
41 2vhw_A Alanine dehydrogenase; 99.8 8.8E-22 3E-26 210.0 9.9 257 55-345 63-352 (377)
42 2eez_A Alanine dehydrogenase; 99.7 8.6E-19 2.9E-23 186.1 5.9 257 56-345 63-349 (369)
43 1gtm_A Glutamate dehydrogenase 99.7 2.2E-19 7.6E-24 194.5 0.4 152 160-327 210-386 (419)
44 3h9u_A Adenosylhomocysteinase; 99.6 1.9E-16 6.4E-21 171.8 9.6 156 88-267 155-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.6 4.2E-16 1.4E-20 167.8 8.5 194 60-261 73-301 (401)
46 3n58_A Adenosylhomocysteinase; 99.6 1.4E-15 4.6E-20 165.3 8.3 142 101-266 205-347 (464)
47 1l7d_A Nicotinamide nucleotide 99.6 6.8E-15 2.3E-19 157.0 10.6 194 55-257 63-299 (384)
48 1gpj_A Glutamyl-tRNA reductase 99.6 3.8E-17 1.3E-21 175.6 -7.4 223 81-338 81-333 (404)
49 3gvp_A Adenosylhomocysteinase 99.5 1.3E-14 4.4E-19 157.2 8.3 141 101-265 178-319 (435)
50 4gbj_A 6-phosphogluconate dehy 99.4 1.4E-12 4.8E-17 134.7 12.0 116 163-280 6-121 (297)
51 3obb_A Probable 3-hydroxyisobu 99.4 6.9E-13 2.4E-17 137.5 7.7 116 163-280 4-121 (300)
52 3ggo_A Prephenate dehydrogenas 99.3 4.9E-12 1.7E-16 131.7 12.7 149 159-310 30-185 (314)
53 2g5c_A Prephenate dehydrogenas 99.3 7.3E-12 2.5E-16 126.5 11.2 142 163-306 2-150 (281)
54 3l6d_A Putative oxidoreductase 99.3 2.9E-12 1E-16 132.2 7.2 120 159-280 6-125 (306)
55 3qha_A Putative oxidoreductase 99.2 1.5E-11 5E-16 126.3 9.9 115 162-280 15-129 (296)
56 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.4E-11 4.6E-16 128.0 8.8 120 159-280 28-148 (320)
57 3pef_A 6-phosphogluconate dehy 99.2 1.7E-11 5.7E-16 124.7 8.3 115 163-279 2-118 (287)
58 3doj_A AT3G25530, dehydrogenas 99.2 2E-11 6.8E-16 126.1 8.9 118 160-279 19-138 (310)
59 4e21_A 6-phosphogluconate dehy 99.2 2.7E-11 9.3E-16 128.6 9.0 114 160-275 20-136 (358)
60 2h78_A Hibadh, 3-hydroxyisobut 99.2 3.3E-11 1.1E-15 123.1 8.9 116 163-280 4-121 (302)
61 3pdu_A 3-hydroxyisobutyrate de 99.2 1.8E-11 6.1E-16 124.5 6.8 116 163-280 2-119 (287)
62 3g0o_A 3-hydroxyisobutyrate de 99.2 2.3E-11 8E-16 124.9 6.5 116 162-279 7-125 (303)
63 4e12_A Diketoreductase; oxidor 99.1 1.7E-10 5.7E-15 117.7 12.3 140 163-313 5-169 (283)
64 3qsg_A NAD-binding phosphogluc 99.1 9.1E-11 3.1E-15 121.5 9.2 119 160-280 22-143 (312)
65 3ktd_A Prephenate dehydrogenas 99.1 4.5E-11 1.6E-15 126.2 7.0 140 162-304 8-154 (341)
66 3b1f_A Putative prephenate deh 99.1 1.3E-10 4.6E-15 117.7 8.7 140 163-306 7-158 (290)
67 2f1k_A Prephenate dehydrogenas 99.1 4.8E-10 1.6E-14 112.9 11.7 139 163-305 1-143 (279)
68 4ezb_A Uncharacterized conserv 99.1 3.3E-10 1.1E-14 117.8 9.8 111 163-279 25-144 (317)
69 4dio_A NAD(P) transhydrogenase 99.0 5.6E-10 1.9E-14 120.4 11.3 181 57-254 88-312 (405)
70 1yb4_A Tartronic semialdehyde 99.0 3.4E-10 1.2E-14 114.5 7.9 108 163-271 4-113 (295)
71 1c1d_A L-phenylalanine dehydro 99.0 2.3E-10 7.8E-15 121.6 6.7 108 159-274 172-280 (355)
72 2pv7_A T-protein [includes: ch 99.0 7.5E-10 2.5E-14 113.8 10.2 120 162-303 21-142 (298)
73 4gwg_A 6-phosphogluconate dehy 99.0 5.9E-10 2E-14 122.9 9.9 112 162-274 4-123 (484)
74 1vpd_A Tartronate semialdehyde 99.0 3.3E-10 1.1E-14 115.1 7.1 111 163-273 6-118 (299)
75 2gf2_A Hibadh, 3-hydroxyisobut 99.0 3.1E-10 1.1E-14 115.0 6.7 108 163-270 1-110 (296)
76 3cky_A 2-hydroxymethyl glutara 99.0 4E-10 1.4E-14 114.5 7.2 109 163-271 5-115 (301)
77 3p2y_A Alanine dehydrogenase/p 99.0 1.2E-09 4.2E-14 116.9 11.2 178 60-254 85-302 (381)
78 1np3_A Ketol-acid reductoisome 99.0 8.4E-11 2.9E-15 123.4 1.5 136 158-304 12-155 (338)
79 2zyd_A 6-phosphogluconate dehy 99.0 7.4E-10 2.5E-14 121.8 8.5 114 160-274 13-133 (480)
80 2cvz_A Dehydrogenase, 3-hydrox 98.9 7.3E-10 2.5E-14 111.6 6.6 106 163-271 2-107 (289)
81 3ond_A Adenosylhomocysteinase; 98.9 1.3E-09 4.6E-14 119.8 8.8 146 88-257 209-355 (488)
82 2uyy_A N-PAC protein; long-cha 98.9 1.2E-09 4.2E-14 112.1 8.1 111 163-273 31-143 (316)
83 2p4q_A 6-phosphogluconate dehy 98.9 1.9E-09 6.5E-14 119.1 9.5 111 163-274 11-129 (497)
84 2iz1_A 6-phosphogluconate dehy 98.9 3E-09 1E-13 116.6 8.1 111 163-274 6-123 (474)
85 2yjz_A Metalloreductase steap4 98.4 2.8E-10 9.7E-15 111.2 0.0 94 160-259 17-110 (201)
86 2pgd_A 6-phosphogluconate dehy 98.8 4.7E-09 1.6E-13 115.2 9.5 111 163-274 3-121 (482)
87 3dtt_A NADP oxidoreductase; st 98.8 9.8E-10 3.4E-14 109.7 3.6 95 158-255 15-125 (245)
88 1zej_A HBD-9, 3-hydroxyacyl-CO 98.8 4.7E-09 1.6E-13 108.7 8.4 128 161-303 11-146 (293)
89 1i36_A Conserved hypothetical 98.8 2.8E-09 9.5E-14 106.4 5.6 102 163-270 1-104 (264)
90 2d5c_A AROE, shikimate 5-dehyd 98.8 1.5E-09 5.1E-14 109.4 3.4 158 70-272 62-222 (263)
91 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 5.7E-09 2E-13 114.6 8.2 111 163-274 2-123 (478)
92 2dpo_A L-gulonate 3-dehydrogen 98.8 1.2E-08 4.2E-13 106.6 10.0 132 162-303 6-162 (319)
93 2q3e_A UDP-glucose 6-dehydroge 98.8 1.1E-08 3.6E-13 111.9 9.2 137 163-299 6-181 (467)
94 3d1l_A Putative NADP oxidoredu 98.7 4.9E-09 1.7E-13 104.9 3.8 101 159-261 7-109 (266)
95 3fr7_A Putative ketol-acid red 98.7 5.8E-09 2E-13 114.6 3.6 97 158-257 49-157 (525)
96 2raf_A Putative dinucleotide-b 98.6 3.3E-08 1.1E-12 96.6 7.4 80 158-258 15-94 (209)
97 3k6j_A Protein F01G10.3, confi 98.6 1.1E-07 3.6E-12 104.4 11.5 140 163-314 55-215 (460)
98 1mv8_A GMD, GDP-mannose 6-dehy 98.6 7.8E-08 2.7E-12 104.0 10.4 107 163-270 1-140 (436)
99 2vns_A Metalloreductase steap3 98.6 2E-08 6.9E-13 98.4 4.7 95 161-260 27-121 (215)
100 3c24_A Putative oxidoreductase 98.6 2.3E-08 7.9E-13 101.5 4.7 93 163-258 12-105 (286)
101 2hk9_A Shikimate dehydrogenase 98.6 5.3E-08 1.8E-12 99.1 7.2 154 60-255 66-222 (275)
102 1leh_A Leucine dehydrogenase; 98.6 2.2E-08 7.7E-13 106.6 4.4 107 159-273 170-278 (364)
103 1f0y_A HCDH, L-3-hydroxyacyl-C 98.6 2E-07 6.7E-12 95.5 10.9 131 163-303 16-175 (302)
104 3oj0_A Glutr, glutamyl-tRNA re 98.6 3.7E-08 1.3E-12 90.0 4.4 89 162-256 21-112 (144)
105 1pjc_A Protein (L-alanine dehy 98.5 1.7E-07 5.9E-12 99.0 9.7 240 59-329 66-327 (361)
106 2izz_A Pyrroline-5-carboxylate 98.5 7.3E-08 2.5E-12 100.0 6.2 107 160-270 20-132 (322)
107 2ahr_A Putative pyrroline carb 98.5 7E-08 2.4E-12 96.1 5.1 100 163-270 4-104 (259)
108 3pid_A UDP-glucose 6-dehydroge 98.5 2.1E-07 7.2E-12 101.3 9.1 112 158-271 32-170 (432)
109 1yqg_A Pyrroline-5-carboxylate 98.5 6.5E-08 2.2E-12 96.3 4.0 100 163-270 1-102 (263)
110 3gt0_A Pyrroline-5-carboxylate 98.5 7.7E-08 2.6E-12 95.7 4.3 104 163-270 3-111 (247)
111 4a7p_A UDP-glucose dehydrogena 98.4 7E-07 2.4E-11 97.4 11.5 107 163-270 9-145 (446)
112 3tri_A Pyrroline-5-carboxylate 98.4 2.1E-07 7.3E-12 94.9 6.3 105 162-270 3-112 (280)
113 1dlj_A UDP-glucose dehydrogena 98.4 5E-07 1.7E-11 96.9 9.2 132 163-301 1-162 (402)
114 3gg2_A Sugar dehydrogenase, UD 98.4 4.8E-07 1.6E-11 98.7 9.1 107 163-270 3-138 (450)
115 2o3j_A UDP-glucose 6-dehydroge 98.4 7.7E-07 2.6E-11 97.7 10.5 107 163-270 10-151 (481)
116 3mog_A Probable 3-hydroxybutyr 98.4 4.9E-07 1.7E-11 99.6 8.8 129 163-303 6-159 (483)
117 2rcy_A Pyrroline carboxylate r 98.4 4.3E-07 1.5E-11 90.3 7.5 98 162-270 4-105 (262)
118 2i99_A MU-crystallin homolog; 98.4 2.2E-07 7.4E-12 96.4 5.3 92 161-258 134-230 (312)
119 1zcj_A Peroxisomal bifunctiona 98.4 1.6E-06 5.3E-11 94.8 11.7 133 162-305 37-191 (463)
120 3g79_A NDP-N-acetyl-D-galactos 98.3 1.4E-06 4.8E-11 95.9 10.3 104 162-266 18-159 (478)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.3 8.3E-07 2.8E-11 91.8 7.7 105 163-270 5-124 (359)
122 1txg_A Glycerol-3-phosphate de 98.3 5.6E-07 1.9E-11 92.4 6.0 105 163-270 1-124 (335)
123 1y81_A Conserved hypothetical 98.3 1.7E-06 5.7E-11 79.9 8.6 103 160-274 12-118 (138)
124 2y0c_A BCEC, UDP-glucose dehyd 98.3 1.2E-06 4.2E-11 96.2 8.5 107 162-269 8-143 (478)
125 1ks9_A KPA reductase;, 2-dehyd 98.3 1.5E-06 5E-11 87.0 8.1 91 163-256 1-99 (291)
126 1wdk_A Fatty oxidation complex 98.2 1.5E-06 5.2E-11 99.9 8.9 139 163-313 315-477 (715)
127 2ew2_A 2-dehydropantoate 2-red 98.2 7.7E-07 2.6E-11 89.9 5.8 106 163-271 4-124 (316)
128 1x0v_A GPD-C, GPDH-C, glycerol 98.2 1.1E-06 3.9E-11 91.2 7.0 95 162-258 8-128 (354)
129 1jay_A Coenzyme F420H2:NADP+ o 98.2 4.8E-07 1.6E-11 87.1 3.6 112 163-282 1-133 (212)
130 3dfu_A Uncharacterized protein 98.2 3.7E-06 1.3E-10 84.4 10.0 70 162-254 6-75 (232)
131 1evy_A Glycerol-3-phosphate de 98.2 2.7E-07 9.2E-12 96.7 1.8 93 164-257 17-127 (366)
132 2dc1_A L-aspartate dehydrogena 98.2 3.4E-06 1.2E-10 83.4 9.3 98 163-273 1-103 (236)
133 1z82_A Glycerol-3-phosphate de 98.2 9.3E-07 3.2E-11 91.7 5.3 89 162-256 14-113 (335)
134 4huj_A Uncharacterized protein 98.2 9.4E-07 3.2E-11 86.7 5.0 92 162-257 23-116 (220)
135 2wtb_A MFP2, fatty acid multif 98.2 3.2E-06 1.1E-10 97.4 10.0 129 163-302 313-465 (725)
136 3k96_A Glycerol-3-phosphate de 98.2 9.6E-07 3.3E-11 93.5 5.1 97 162-260 29-139 (356)
137 1yj8_A Glycerol-3-phosphate de 98.2 9.7E-07 3.3E-11 93.1 5.0 92 163-256 22-143 (375)
138 3ojo_A CAP5O; rossmann fold, c 98.2 3.2E-06 1.1E-10 91.9 9.1 109 160-269 9-144 (431)
139 3ngx_A Bifunctional protein fo 98.1 5.5E-06 1.9E-10 85.1 9.3 77 160-257 148-225 (276)
140 2duw_A Putative COA-binding pr 98.1 2.4E-06 8.1E-11 79.4 5.9 103 162-274 13-119 (145)
141 3p2o_A Bifunctional protein fo 98.1 7E-06 2.4E-10 84.7 9.6 79 159-258 157-236 (285)
142 1b0a_A Protein (fold bifunctio 98.1 5.3E-06 1.8E-10 85.7 8.7 80 159-259 156-236 (288)
143 4a5o_A Bifunctional protein fo 98.1 7.8E-06 2.7E-10 84.4 10.0 79 159-258 158-237 (286)
144 3l07_A Bifunctional protein fo 98.1 7.8E-06 2.7E-10 84.4 9.7 78 159-257 158-236 (285)
145 1a4i_A Methylenetetrahydrofola 98.1 8.8E-06 3E-10 84.6 9.9 130 159-325 162-294 (301)
146 2c2x_A Methylenetetrahydrofola 98.1 8.6E-06 2.9E-10 83.9 9.7 80 159-259 155-237 (281)
147 1edz_A 5,10-methylenetetrahydr 98.1 3.8E-06 1.3E-10 88.0 6.9 91 159-256 174-277 (320)
148 3don_A Shikimate dehydrogenase 98.1 5.9E-06 2E-10 84.8 8.1 107 160-271 115-225 (277)
149 4a26_A Putative C-1-tetrahydro 98.0 8.5E-06 2.9E-10 84.7 8.8 79 159-258 162-243 (300)
150 3u62_A Shikimate dehydrogenase 98.0 8.5E-06 2.9E-10 82.5 7.5 105 160-271 107-214 (253)
151 2egg_A AROE, shikimate 5-dehyd 98.0 6.4E-06 2.2E-10 85.0 6.1 109 160-273 139-257 (297)
152 3c85_A Putative glutathione-re 97.9 2.9E-06 9.9E-11 80.0 2.4 96 159-256 36-141 (183)
153 3phh_A Shikimate dehydrogenase 97.9 9.5E-06 3.3E-10 83.1 5.6 105 162-271 118-223 (269)
154 2qyt_A 2-dehydropantoate 2-red 97.9 5.1E-06 1.7E-10 84.4 3.5 104 163-270 9-132 (317)
155 2g1u_A Hypothetical protein TM 97.9 3.6E-05 1.2E-09 70.9 8.8 97 159-257 16-121 (155)
156 2i76_A Hypothetical protein; N 97.8 1.6E-06 5.5E-11 87.7 -1.5 86 163-256 3-91 (276)
157 1x7d_A Ornithine cyclodeaminas 97.8 2E-05 6.9E-10 83.3 5.8 92 161-256 128-228 (350)
158 3ado_A Lambda-crystallin; L-gu 97.8 4.1E-05 1.4E-09 80.2 7.9 167 161-345 5-196 (319)
159 3hdj_A Probable ornithine cycl 97.7 6.5E-05 2.2E-09 78.3 9.0 89 161-257 120-216 (313)
160 3ghy_A Ketopantoate reductase 97.7 2.6E-05 9E-10 81.0 5.1 91 162-256 3-106 (335)
161 2hmt_A YUAA protein; RCK, KTN, 97.7 3.7E-05 1.3E-09 68.2 5.1 97 159-257 3-107 (144)
162 3hwr_A 2-dehydropantoate 2-red 97.6 4.6E-05 1.6E-09 78.7 6.1 104 160-268 17-133 (318)
163 3ic5_A Putative saccharopine d 97.6 2.4E-05 8.3E-10 67.2 3.1 89 161-254 4-100 (118)
164 1iuk_A Hypothetical protein TT 97.6 0.00017 6E-09 66.4 8.9 104 161-274 12-119 (140)
165 3i83_A 2-dehydropantoate 2-red 97.6 0.00021 7.2E-09 73.7 10.4 107 163-274 3-124 (320)
166 3c7a_A Octopine dehydrogenase; 97.6 7.4E-05 2.5E-09 79.3 7.1 89 163-253 3-115 (404)
167 3fwz_A Inner membrane protein 97.6 3.4E-05 1.2E-09 70.1 3.7 92 162-255 7-106 (140)
168 2d59_A Hypothetical protein PH 97.6 0.00025 8.7E-09 65.5 9.5 101 162-274 22-126 (144)
169 2z2v_A Hypothetical protein PH 97.6 2.4E-05 8E-10 83.1 2.7 107 160-273 14-126 (365)
170 1lss_A TRK system potassium up 97.5 8.9E-05 3E-09 65.5 5.8 91 162-254 4-103 (140)
171 2ewd_A Lactate dehydrogenase,; 97.5 0.00015 5E-09 75.0 8.0 105 162-267 4-134 (317)
172 1omo_A Alanine dehydrogenase; 97.5 9.2E-05 3.1E-09 77.1 6.3 87 161-255 124-218 (322)
173 3llv_A Exopolyphosphatase-rela 97.5 9.3E-05 3.2E-09 66.6 5.3 91 161-253 5-103 (141)
174 2qrj_A Saccharopine dehydrogen 97.5 6.5E-05 2.2E-09 80.8 4.7 84 161-255 213-301 (394)
175 3vtf_A UDP-glucose 6-dehydroge 97.5 0.00024 8.2E-09 77.5 9.2 106 161-266 20-156 (444)
176 3c1a_A Putative oxidoreductase 97.4 0.00013 4.3E-09 74.9 5.8 106 163-274 11-122 (315)
177 4b4u_A Bifunctional protein fo 97.4 0.00044 1.5E-08 71.9 9.8 77 159-256 176-253 (303)
178 3o8q_A Shikimate 5-dehydrogena 97.4 7.5E-05 2.6E-09 76.7 3.6 96 159-257 123-224 (281)
179 1p77_A Shikimate 5-dehydrogena 97.4 7.3E-05 2.5E-09 75.8 3.2 71 160-230 117-192 (272)
180 3hn2_A 2-dehydropantoate 2-red 97.3 0.00034 1.2E-08 71.8 8.1 107 163-275 3-123 (312)
181 3ulk_A Ketol-acid reductoisome 97.3 0.00023 7.8E-09 77.5 6.9 96 158-257 33-134 (491)
182 1tlt_A Putative oxidoreductase 97.3 0.00047 1.6E-08 70.7 9.0 107 163-274 6-118 (319)
183 1nyt_A Shikimate 5-dehydrogena 97.3 0.00026 8.8E-09 71.7 6.6 94 160-257 117-217 (271)
184 1vl6_A Malate oxidoreductase; 97.3 0.00026 8.7E-09 76.0 6.8 149 159-325 189-359 (388)
185 3euw_A MYO-inositol dehydrogen 97.3 0.00046 1.6E-08 71.4 7.8 69 163-231 5-78 (344)
186 3uuw_A Putative oxidoreductase 97.2 0.00026 9E-09 72.2 5.7 107 162-273 6-118 (308)
187 2ho3_A Oxidoreductase, GFO/IDH 97.2 0.00038 1.3E-08 71.5 7.0 106 163-273 2-114 (325)
188 3g17_A Similar to 2-dehydropan 97.2 0.00012 3.9E-09 74.7 2.9 93 163-257 3-99 (294)
189 1pzg_A LDH, lactate dehydrogen 97.2 0.00065 2.2E-08 71.0 8.6 95 162-256 9-134 (331)
190 1id1_A Putative potassium chan 97.2 0.00045 1.5E-08 63.2 6.3 93 162-256 3-107 (153)
191 3evn_A Oxidoreductase, GFO/IDH 97.2 0.0012 4.1E-08 68.1 9.8 68 163-230 6-79 (329)
192 4hkt_A Inositol 2-dehydrogenas 97.2 0.00043 1.5E-08 71.3 6.4 68 163-231 4-76 (331)
193 3db2_A Putative NADPH-dependen 97.1 0.00044 1.5E-08 72.0 6.2 69 163-231 6-79 (354)
194 1a5z_A L-lactate dehydrogenase 97.1 0.00056 1.9E-08 70.9 6.9 96 163-259 1-121 (319)
195 1hyh_A L-hicdh, L-2-hydroxyiso 97.1 0.0006 2.1E-08 70.1 7.0 67 163-230 2-81 (309)
196 3cea_A MYO-inositol 2-dehydrog 97.1 0.00047 1.6E-08 71.2 6.2 107 163-274 9-125 (346)
197 1f06_A MESO-diaminopimelate D- 97.1 0.0014 4.7E-08 68.0 9.6 101 163-271 4-109 (320)
198 3jyo_A Quinate/shikimate dehyd 97.1 0.00046 1.6E-08 70.8 5.9 70 160-229 125-205 (283)
199 3ego_A Probable 2-dehydropanto 97.1 0.00035 1.2E-08 71.9 4.7 89 163-256 3-101 (307)
200 1guz_A Malate dehydrogenase; o 97.1 0.0011 3.7E-08 68.5 8.3 92 163-255 1-119 (310)
201 3bio_A Oxidoreductase, GFO/IDH 97.1 0.001 3.5E-08 68.5 8.1 101 163-272 10-117 (304)
202 2glx_A 1,5-anhydro-D-fructose 97.1 0.00035 1.2E-08 71.7 4.5 105 164-273 2-114 (332)
203 3pwz_A Shikimate dehydrogenase 97.0 0.00054 1.9E-08 70.0 5.8 95 159-256 117-217 (272)
204 2hjr_A Malate dehydrogenase; m 97.0 0.0014 4.7E-08 68.5 8.9 92 163-255 15-132 (328)
205 3fbt_A Chorismate mutase and s 97.0 0.00054 1.8E-08 70.5 5.4 92 160-256 120-216 (282)
206 2v6b_A L-LDH, L-lactate dehydr 97.0 0.00089 3.1E-08 69.0 7.1 104 163-267 1-129 (304)
207 3ezy_A Dehydrogenase; structur 97.0 0.00086 3E-08 69.5 6.6 68 163-230 3-76 (344)
208 1nvt_A Shikimate 5'-dehydrogen 97.0 0.00027 9.2E-09 72.0 2.7 95 160-257 126-233 (287)
209 1t2d_A LDH-P, L-lactate dehydr 96.9 0.0023 8E-08 66.6 9.5 92 163-255 5-127 (322)
210 3e9m_A Oxidoreductase, GFO/IDH 96.9 0.00093 3.2E-08 69.0 6.5 69 163-231 6-80 (330)
211 1xea_A Oxidoreductase, GFO/IDH 96.9 0.00071 2.4E-08 69.5 5.4 107 163-274 3-116 (323)
212 3rc1_A Sugar 3-ketoreductase; 96.9 0.0011 3.8E-08 69.2 6.9 69 162-230 27-101 (350)
213 3e18_A Oxidoreductase; dehydro 96.9 0.00048 1.7E-08 72.2 4.1 68 163-230 6-77 (359)
214 2p2s_A Putative oxidoreductase 96.9 0.0015 5.1E-08 67.4 7.5 106 163-273 5-118 (336)
215 3q2i_A Dehydrogenase; rossmann 96.9 0.00044 1.5E-08 72.0 3.6 68 162-229 13-86 (354)
216 1j5p_A Aspartate dehydrogenase 96.9 0.0024 8.3E-08 64.8 8.9 98 161-272 11-112 (253)
217 3tnl_A Shikimate dehydrogenase 96.9 0.00069 2.4E-08 70.7 4.7 71 159-229 151-237 (315)
218 4fgw_A Glycerol-3-phosphate de 96.8 0.0028 9.4E-08 68.1 9.3 92 163-256 35-153 (391)
219 2a9f_A Putative malic enzyme ( 96.8 0.0011 3.7E-08 71.4 5.9 151 159-325 185-355 (398)
220 2dvm_A Malic enzyme, 439AA lon 96.8 0.0019 6.6E-08 70.4 7.7 109 159-272 183-312 (439)
221 3kux_A Putative oxidoreductase 96.8 0.0025 8.7E-08 66.3 8.1 68 163-231 8-80 (352)
222 3e82_A Putative oxidoreductase 96.8 0.0023 7.7E-08 67.2 7.8 67 163-230 8-79 (364)
223 3f4l_A Putative oxidoreductase 96.8 0.0027 9.2E-08 65.9 8.3 68 163-230 3-77 (345)
224 3qy9_A DHPR, dihydrodipicolina 96.8 0.0041 1.4E-07 62.6 9.3 81 163-256 4-85 (243)
225 2nu8_A Succinyl-COA ligase [AD 96.7 0.004 1.4E-07 63.9 8.9 106 162-274 7-117 (288)
226 3zwc_A Peroxisomal bifunctiona 96.7 0.0049 1.7E-07 71.3 10.5 164 162-345 316-501 (742)
227 3m2t_A Probable dehydrogenase; 96.7 0.0013 4.4E-08 69.0 4.9 68 162-229 5-79 (359)
228 1jw9_B Molybdopterin biosynthe 96.6 0.0013 4.3E-08 66.1 4.5 93 157-253 26-152 (249)
229 3l4b_C TRKA K+ channel protien 96.6 0.00096 3.3E-08 64.6 3.5 91 163-255 1-100 (218)
230 3t4e_A Quinate/shikimate dehyd 96.6 0.0014 4.7E-08 68.4 4.5 71 159-229 145-231 (312)
231 1ydw_A AX110P-like protein; st 96.6 0.0026 9E-08 66.3 6.6 107 163-274 7-124 (362)
232 1ldn_A L-lactate dehydrogenase 96.6 0.0026 8.8E-08 66.0 6.5 94 162-255 6-124 (316)
233 3q2o_A Phosphoribosylaminoimid 96.5 0.0034 1.2E-07 66.1 7.3 67 160-226 12-83 (389)
234 1oju_A MDH, malate dehydrogena 96.5 0.0035 1.2E-07 64.7 7.2 92 163-255 1-119 (294)
235 1y6j_A L-lactate dehydrogenase 96.5 0.0093 3.2E-07 61.9 10.3 119 162-280 7-153 (318)
236 3e8x_A Putative NAD-dependent 96.5 0.0033 1.1E-07 60.8 6.3 73 157-229 16-95 (236)
237 3nep_X Malate dehydrogenase; h 96.5 0.0037 1.3E-07 65.2 6.9 94 163-256 1-120 (314)
238 1zud_1 Adenylyltransferase THI 96.5 0.003 1E-07 63.4 6.1 94 157-254 23-150 (251)
239 2i6u_A Otcase, ornithine carba 96.4 0.036 1.2E-06 57.7 14.1 95 160-254 146-265 (307)
240 1lld_A L-lactate dehydrogenase 96.4 0.0061 2.1E-07 62.2 8.2 96 161-257 6-127 (319)
241 1ur5_A Malate dehydrogenase; o 96.4 0.0083 2.9E-07 61.9 9.2 92 163-255 3-120 (309)
242 2aef_A Calcium-gated potassium 96.4 0.0028 9.7E-08 61.8 5.2 90 162-255 9-106 (234)
243 3mz0_A Inositol 2-dehydrogenas 96.4 0.0017 6E-08 67.2 3.9 68 163-230 3-78 (344)
244 3qvo_A NMRA family protein; st 96.4 0.0061 2.1E-07 59.2 7.5 95 161-257 22-127 (236)
245 3fhl_A Putative oxidoreductase 96.4 0.0033 1.1E-07 65.7 6.0 67 163-230 6-77 (362)
246 3ec7_A Putative dehydrogenase; 96.4 0.0023 8E-08 66.9 4.8 69 162-230 23-99 (357)
247 2i6t_A Ubiquitin-conjugating e 96.4 0.0082 2.8E-07 62.1 8.8 94 162-256 14-127 (303)
248 1npy_A Hypothetical shikimate 96.4 0.0031 1.1E-07 64.3 5.5 67 161-229 118-186 (271)
249 3gvi_A Malate dehydrogenase; N 96.4 0.0084 2.9E-07 62.7 8.9 95 161-256 6-126 (324)
250 3fef_A Putative glucosidase LP 96.4 0.0028 9.5E-08 69.3 5.4 106 161-267 4-159 (450)
251 1hdo_A Biliverdin IX beta redu 96.4 0.012 4.1E-07 54.8 9.1 68 162-229 3-78 (206)
252 3r6d_A NAD-dependent epimerase 96.3 0.0067 2.3E-07 58.0 7.2 91 163-257 6-110 (221)
253 3vku_A L-LDH, L-lactate dehydr 96.3 0.0081 2.8E-07 62.9 8.2 97 160-256 7-127 (326)
254 3d0o_A L-LDH 1, L-lactate dehy 96.3 0.0066 2.3E-07 62.9 7.5 96 161-256 5-125 (317)
255 3l9w_A Glutathione-regulated p 96.3 0.0018 6E-08 69.9 3.3 93 162-256 4-104 (413)
256 3r7f_A Aspartate carbamoyltran 96.3 0.062 2.1E-06 55.8 14.7 92 160-254 145-250 (304)
257 2axq_A Saccharopine dehydrogen 96.3 0.002 7E-08 70.5 3.7 107 159-271 20-135 (467)
258 1oi7_A Succinyl-COA synthetase 96.3 0.011 3.9E-07 60.6 9.0 107 161-274 6-117 (288)
259 3pqe_A L-LDH, L-lactate dehydr 96.2 0.0086 2.9E-07 62.7 8.2 96 161-256 4-124 (326)
260 3ldh_A Lactate dehydrogenase; 96.2 0.0043 1.5E-07 65.2 5.9 95 161-256 20-140 (330)
261 1yqd_A Sinapyl alcohol dehydro 96.2 0.0034 1.2E-07 65.7 5.0 91 161-256 187-284 (366)
262 2ef0_A Ornithine carbamoyltran 96.2 0.033 1.1E-06 57.9 12.3 95 160-254 152-261 (301)
263 4f2g_A Otcase 1, ornithine car 96.2 0.063 2.2E-06 55.9 14.4 95 160-254 152-264 (309)
264 3dfz_A SIRC, precorrin-2 dehyd 96.2 0.0057 2E-07 60.9 6.2 92 157-254 26-121 (223)
265 2vt3_A REX, redox-sensing tran 96.2 0.005 1.7E-07 60.9 5.7 66 163-228 86-155 (215)
266 3ohs_X Trans-1,2-dihydrobenzen 96.2 0.0037 1.3E-07 64.4 5.0 68 163-230 3-78 (334)
267 1pg5_A Aspartate carbamoyltran 96.2 0.056 1.9E-06 56.0 13.8 95 160-254 147-260 (299)
268 1ff9_A Saccharopine reductase; 96.2 0.0043 1.5E-07 67.5 5.7 69 161-229 2-79 (450)
269 1h6d_A Precursor form of gluco 96.2 0.0023 8E-08 68.9 3.5 106 163-273 84-202 (433)
270 1obb_A Maltase, alpha-glucosid 96.2 0.01 3.6E-07 65.3 8.7 114 162-276 3-173 (480)
271 3i23_A Oxidoreductase, GFO/IDH 96.1 0.012 4E-07 61.2 8.6 67 163-230 3-77 (349)
272 3p7m_A Malate dehydrogenase; p 96.1 0.014 4.8E-07 60.9 9.0 94 161-255 4-123 (321)
273 1pvv_A Otcase, ornithine carba 96.1 0.059 2E-06 56.3 13.5 95 160-254 153-271 (315)
274 3dhn_A NAD-dependent epimerase 96.1 0.011 3.9E-07 56.2 7.4 66 163-229 5-78 (227)
275 3orq_A N5-carboxyaminoimidazol 96.0 0.01 3.4E-07 62.6 7.5 66 159-224 9-79 (377)
276 4a7p_A UDP-glucose dehydrogena 96.0 0.011 3.6E-07 64.6 7.7 100 159-264 319-430 (446)
277 3gdo_A Uncharacterized oxidore 96.0 0.0042 1.4E-07 64.9 4.4 68 163-231 6-78 (358)
278 3ew7_A LMO0794 protein; Q8Y8U8 96.0 0.011 3.9E-07 55.6 7.0 94 163-257 1-105 (221)
279 1u8x_X Maltose-6'-phosphate gl 96.0 0.0078 2.7E-07 66.1 6.6 106 162-267 28-184 (472)
280 3abi_A Putative uncharacterize 96.0 0.0029 1E-07 66.3 3.2 68 161-229 15-88 (365)
281 3dqp_A Oxidoreductase YLBE; al 96.0 0.011 3.7E-07 56.4 6.9 68 163-230 1-75 (219)
282 1vlv_A Otcase, ornithine carba 96.0 0.063 2.2E-06 56.3 13.2 95 160-254 165-285 (325)
283 2bka_A CC3, TAT-interacting pr 95.9 0.026 8.8E-07 54.3 9.1 71 160-230 16-96 (242)
284 1oth_A Protein (ornithine tran 95.8 0.06 2E-06 56.4 12.3 94 160-253 153-270 (321)
285 3two_A Mannitol dehydrogenase; 95.8 0.0087 3E-07 61.9 5.9 91 161-256 176-267 (348)
286 1ez4_A Lactate dehydrogenase; 95.8 0.012 4.3E-07 61.1 7.0 95 162-256 5-123 (318)
287 1lc0_A Biliverdin reductase A; 95.8 0.025 8.4E-07 57.7 8.8 102 163-274 8-118 (294)
288 3o9z_A Lipopolysaccaride biosy 95.7 0.022 7.5E-07 58.6 8.4 67 163-229 4-83 (312)
289 2zqz_A L-LDH, L-lactate dehydr 95.7 0.014 4.7E-07 61.0 6.9 96 161-256 8-127 (326)
290 3tl2_A Malate dehydrogenase; c 95.7 0.017 5.8E-07 60.1 7.4 95 161-256 7-129 (315)
291 3oa2_A WBPB; oxidoreductase, s 95.7 0.023 7.7E-07 58.6 8.3 67 163-229 4-84 (318)
292 4ep1_A Otcase, ornithine carba 95.7 0.14 4.8E-06 54.0 14.3 95 160-254 177-294 (340)
293 3moi_A Probable dehydrogenase; 95.7 0.0053 1.8E-07 64.8 3.5 67 163-229 3-75 (387)
294 2fp4_A Succinyl-COA ligase [GD 95.7 0.033 1.1E-06 57.7 9.4 108 160-274 11-125 (305)
295 2cdc_A Glucose dehydrogenase g 95.6 0.0046 1.6E-07 64.6 2.9 93 159-255 178-279 (366)
296 2we8_A Xanthine dehydrogenase; 95.6 0.046 1.6E-06 58.6 10.7 97 162-278 204-303 (386)
297 2nqt_A N-acetyl-gamma-glutamyl 95.6 0.031 1.1E-06 59.1 9.3 98 163-267 10-123 (352)
298 3d6n_B Aspartate carbamoyltran 95.6 0.18 6.2E-06 52.1 14.7 70 160-230 144-216 (291)
299 2z1m_A GDP-D-mannose dehydrata 95.6 0.016 5.6E-07 58.3 6.8 37 161-197 2-39 (345)
300 3ff4_A Uncharacterized protein 95.6 0.025 8.4E-07 51.1 7.2 99 163-274 5-107 (122)
301 3tum_A Shikimate dehydrogenase 95.6 0.01 3.5E-07 60.5 5.2 94 159-252 122-223 (269)
302 2dt5_A AT-rich DNA-binding pro 95.5 0.012 4.2E-07 57.9 5.4 67 162-229 80-151 (211)
303 3h2s_A Putative NADH-flavin re 95.5 0.03 1E-06 53.1 7.9 94 163-256 1-106 (224)
304 2yv1_A Succinyl-COA ligase [AD 95.5 0.026 9E-07 58.0 8.1 106 163-274 14-123 (294)
305 1ml4_A Aspartate transcarbamoy 95.5 0.023 7.9E-07 59.2 7.7 95 160-254 153-268 (308)
306 2ixa_A Alpha-N-acetylgalactosa 95.5 0.022 7.4E-07 61.4 7.7 67 163-229 21-102 (444)
307 4aj2_A L-lactate dehydrogenase 95.5 0.017 6E-07 60.5 6.7 97 159-256 16-138 (331)
308 1piw_A Hypothetical zinc-type 95.5 0.0075 2.6E-07 62.8 3.8 93 161-256 179-278 (360)
309 4ew6_A D-galactose-1-dehydroge 95.5 0.018 6.2E-07 59.6 6.6 62 162-229 25-92 (330)
310 4amu_A Ornithine carbamoyltran 95.5 0.097 3.3E-06 55.7 12.2 95 160-254 178-300 (365)
311 3tpf_A Otcase, ornithine carba 95.4 0.17 5.9E-06 52.6 13.7 95 160-254 143-262 (307)
312 1dxh_A Ornithine carbamoyltran 95.4 0.039 1.3E-06 58.1 8.9 96 159-254 152-274 (335)
313 2ozp_A N-acetyl-gamma-glutamyl 95.4 0.045 1.5E-06 57.5 9.2 101 163-269 5-115 (345)
314 1uuf_A YAHK, zinc-type alcohol 95.3 0.0091 3.1E-07 62.7 3.9 90 161-255 194-289 (369)
315 3ojo_A CAP5O; rossmann fold, c 95.3 0.048 1.7E-06 59.2 9.6 86 159-256 312-408 (431)
316 2dkn_A 3-alpha-hydroxysteroid 95.3 0.024 8.2E-07 54.6 6.6 67 163-229 2-73 (255)
317 3gpi_A NAD-dependent epimerase 95.3 0.016 5.5E-07 57.5 5.4 67 162-228 3-73 (286)
318 3lk7_A UDP-N-acetylmuramoylala 95.3 0.05 1.7E-06 58.7 9.7 114 159-272 6-138 (451)
319 1cdo_A Alcohol dehydrogenase; 95.3 0.028 9.7E-07 58.6 7.5 90 161-255 192-295 (374)
320 3ruf_A WBGU; rossmann fold, UD 95.3 0.032 1.1E-06 56.7 7.7 69 160-228 23-110 (351)
321 2w37_A Ornithine carbamoyltran 95.3 0.1 3.5E-06 55.4 11.7 95 160-254 174-295 (359)
322 3ius_A Uncharacterized conserv 95.3 0.019 6.6E-07 56.7 5.8 66 162-229 5-74 (286)
323 2xxj_A L-LDH, L-lactate dehydr 95.3 0.022 7.7E-07 58.9 6.5 93 163-255 1-117 (310)
324 3rui_A Ubiquitin-like modifier 95.3 0.06 2E-06 56.8 9.7 119 115-254 4-171 (340)
325 2jhf_A Alcohol dehydrogenase E 95.2 0.028 9.7E-07 58.6 7.3 90 161-255 191-294 (374)
326 2nvw_A Galactose/lactose metab 95.2 0.011 3.7E-07 64.8 4.1 67 163-229 40-119 (479)
327 1duv_G Octase-1, ornithine tra 95.2 0.037 1.3E-06 58.2 8.0 95 160-254 153-274 (333)
328 3i6i_A Putative leucoanthocyan 95.2 0.032 1.1E-06 57.0 7.3 35 161-195 9-44 (346)
329 3csu_A Protein (aspartate carb 95.2 0.045 1.5E-06 57.1 8.4 95 160-254 152-267 (310)
330 4had_A Probable oxidoreductase 95.2 0.0098 3.4E-07 61.4 3.4 67 163-229 24-97 (350)
331 2rir_A Dipicolinate synthase, 95.2 0.064 2.2E-06 54.6 9.5 107 160-274 5-121 (300)
332 1rjw_A ADH-HT, alcohol dehydro 95.2 0.012 4E-07 60.8 4.0 91 161-256 164-263 (339)
333 2pd4_A Enoyl-[acyl-carrier-pro 95.2 0.025 8.6E-07 56.3 6.3 38 159-196 3-43 (275)
334 2d4a_B Malate dehydrogenase; a 95.1 0.017 5.7E-07 59.8 5.1 91 164-255 1-117 (308)
335 1xyg_A Putative N-acetyl-gamma 95.1 0.051 1.7E-06 57.4 8.9 102 162-271 16-130 (359)
336 1ys4_A Aspartate-semialdehyde 95.1 0.029 9.8E-07 59.0 6.9 88 163-255 9-115 (354)
337 3slg_A PBGP3 protein; structur 95.1 0.032 1.1E-06 57.3 7.1 74 156-229 18-102 (372)
338 1s6y_A 6-phospho-beta-glucosid 95.1 0.026 8.8E-07 61.6 6.6 106 162-267 7-165 (450)
339 1y1p_A ARII, aldehyde reductas 95.1 0.032 1.1E-06 56.0 6.9 70 160-229 9-94 (342)
340 3e48_A Putative nucleoside-dip 95.1 0.032 1.1E-06 55.2 6.8 67 163-229 1-76 (289)
341 3gd5_A Otcase, ornithine carba 95.1 0.11 3.7E-06 54.5 10.9 95 160-254 155-273 (323)
342 4gsl_A Ubiquitin-like modifier 95.1 0.053 1.8E-06 61.3 9.1 130 104-254 284-463 (615)
343 4fb5_A Probable oxidoreductase 95.0 0.02 6.9E-07 59.2 5.4 68 163-230 26-106 (393)
344 3btv_A Galactose/lactose metab 95.0 0.024 8.2E-07 61.0 6.2 67 163-229 21-100 (438)
345 1p0f_A NADP-dependent alcohol 95.0 0.034 1.2E-06 58.0 7.2 90 161-255 191-294 (373)
346 3m2p_A UDP-N-acetylglucosamine 95.0 0.04 1.4E-06 55.2 7.4 67 162-229 2-73 (311)
347 1smk_A Malate dehydrogenase, g 95.0 0.028 9.7E-07 58.4 6.4 69 161-229 7-87 (326)
348 3h8v_A Ubiquitin-like modifier 95.0 0.027 9.1E-07 58.2 6.1 39 157-195 31-70 (292)
349 1mld_A Malate dehydrogenase; o 95.0 0.043 1.5E-06 56.8 7.7 99 163-263 1-124 (314)
350 4f3y_A DHPR, dihydrodipicolina 95.0 0.039 1.3E-06 56.4 7.2 65 163-227 8-82 (272)
351 2yv2_A Succinyl-COA synthetase 95.0 0.055 1.9E-06 55.7 8.3 106 162-273 13-123 (297)
352 2fzw_A Alcohol dehydrogenase c 95.0 0.028 9.6E-07 58.5 6.3 90 161-255 190-293 (373)
353 1e3i_A Alcohol dehydrogenase, 94.9 0.04 1.4E-06 57.6 7.2 90 161-255 195-298 (376)
354 1iz0_A Quinone oxidoreductase; 94.9 0.015 5.3E-07 58.7 3.9 88 161-255 125-219 (302)
355 3gg2_A Sugar dehydrogenase, UD 94.9 0.035 1.2E-06 60.4 6.9 94 159-256 315-420 (450)
356 4id9_A Short-chain dehydrogena 94.9 0.026 8.7E-07 57.4 5.5 73 157-229 14-88 (347)
357 2cf5_A Atccad5, CAD, cinnamyl 94.9 0.018 6.3E-07 59.9 4.5 90 161-255 180-276 (357)
358 3fi9_A Malate dehydrogenase; s 94.8 0.023 7.9E-07 59.9 5.2 68 160-227 6-85 (343)
359 3v5n_A Oxidoreductase; structu 94.8 0.034 1.2E-06 59.4 6.5 69 162-230 37-122 (417)
360 2d8a_A PH0655, probable L-thre 94.8 0.011 3.7E-07 61.2 2.6 90 161-255 167-268 (348)
361 2gas_A Isoflavone reductase; N 94.8 0.038 1.3E-06 55.0 6.5 34 162-195 2-36 (307)
362 3keo_A Redox-sensing transcrip 94.8 0.027 9.2E-07 55.7 5.2 68 162-229 84-159 (212)
363 3g79_A NDP-N-acetyl-D-galactos 94.8 0.084 2.9E-06 58.0 9.7 97 159-264 350-458 (478)
364 3ip1_A Alcohol dehydrogenase, 94.8 0.027 9.2E-07 59.6 5.6 95 161-255 213-319 (404)
365 3on5_A BH1974 protein; structu 94.8 0.067 2.3E-06 56.9 8.6 93 162-278 199-293 (362)
366 1b8p_A Protein (malate dehydro 94.8 0.063 2.1E-06 55.7 8.2 94 162-255 5-134 (329)
367 2q1w_A Putative nucleotide sug 94.7 0.039 1.3E-06 56.1 6.5 72 158-229 17-100 (333)
368 3h5n_A MCCB protein; ubiquitin 94.7 0.034 1.2E-06 58.6 6.2 39 157-195 113-152 (353)
369 1xgk_A Nitrogen metabolite rep 94.7 0.02 6.7E-07 59.6 4.3 97 161-257 4-115 (352)
370 2hcy_A Alcohol dehydrogenase 1 94.7 0.026 8.9E-07 58.3 5.1 90 161-255 169-270 (347)
371 1lu9_A Methylene tetrahydromet 94.7 0.03 1E-06 56.5 5.4 36 160-195 117-153 (287)
372 3u3x_A Oxidoreductase; structu 94.7 0.018 6.3E-07 60.2 3.9 68 162-229 26-99 (361)
373 3do5_A HOM, homoserine dehydro 94.7 0.054 1.9E-06 56.6 7.5 111 163-274 3-136 (327)
374 1pqw_A Polyketide synthase; ro 94.6 0.0092 3.1E-07 56.3 1.4 36 161-196 38-74 (198)
375 3grf_A Ornithine carbamoyltran 94.6 0.11 3.6E-06 54.7 9.5 96 159-254 158-283 (328)
376 3oh8_A Nucleoside-diphosphate 94.6 0.071 2.4E-06 58.3 8.5 64 162-228 147-211 (516)
377 2pzm_A Putative nucleotide sug 94.6 0.036 1.2E-06 56.3 5.8 71 158-229 16-99 (330)
378 3k31_A Enoyl-(acyl-carrier-pro 94.6 0.039 1.3E-06 55.8 6.0 39 157-195 25-66 (296)
379 1zh8_A Oxidoreductase; TM0312, 94.6 0.015 5.3E-07 60.2 3.1 68 162-229 18-93 (340)
380 1e3j_A NADP(H)-dependent ketos 94.5 0.043 1.5E-06 56.7 6.3 90 161-255 168-272 (352)
381 3dty_A Oxidoreductase, GFO/IDH 94.5 0.013 4.4E-07 62.1 2.4 69 162-230 12-97 (398)
382 3uko_A Alcohol dehydrogenase c 94.5 0.039 1.3E-06 57.7 6.0 89 161-254 193-295 (378)
383 1pl8_A Human sorbitol dehydrog 94.5 0.028 9.4E-07 58.4 4.7 90 161-255 171-274 (356)
384 4e4t_A Phosphoribosylaminoimid 94.5 0.027 9.3E-07 60.4 4.8 65 159-223 32-101 (419)
385 3c1o_A Eugenol synthase; pheny 94.5 0.049 1.7E-06 54.7 6.4 34 162-195 4-38 (321)
386 3sds_A Ornithine carbamoyltran 94.4 0.13 4.3E-06 54.6 9.6 97 158-254 184-308 (353)
387 1lnq_A MTHK channels, potassiu 94.4 0.021 7.2E-07 58.8 3.7 87 162-252 115-209 (336)
388 3eag_A UDP-N-acetylmuramate:L- 94.4 0.057 1.9E-06 55.8 6.8 110 162-271 4-133 (326)
389 2p91_A Enoyl-[acyl-carrier-pro 94.4 0.074 2.5E-06 53.2 7.4 37 159-195 18-57 (285)
390 1fjh_A 3alpha-hydroxysteroid d 94.4 0.063 2.2E-06 52.2 6.8 97 163-259 2-118 (257)
391 3oig_A Enoyl-[acyl-carrier-pro 94.4 0.091 3.1E-06 51.7 8.0 37 159-195 4-43 (266)
392 3vh1_A Ubiquitin-like modifier 94.4 0.034 1.2E-06 62.7 5.4 93 158-254 323-464 (598)
393 1b7g_O Protein (glyceraldehyde 94.3 0.06 2.1E-06 56.5 6.9 66 164-229 3-88 (340)
394 2czc_A Glyceraldehyde-3-phosph 94.3 0.025 8.5E-07 59.0 4.0 68 163-230 3-91 (334)
395 2r6j_A Eugenol synthase 1; phe 94.3 0.064 2.2E-06 53.9 6.8 65 163-227 12-88 (318)
396 1kyq_A Met8P, siroheme biosynt 94.2 0.18 6.2E-06 51.6 10.0 38 158-195 9-46 (274)
397 3pxx_A Carveol dehydrogenase; 94.2 0.12 4.1E-06 51.2 8.6 38 157-194 5-43 (287)
398 3uog_A Alcohol dehydrogenase; 94.2 0.02 6.9E-07 59.7 3.0 36 161-196 189-224 (363)
399 1db3_A GDP-mannose 4,6-dehydra 94.2 0.077 2.6E-06 54.3 7.3 35 162-196 1-36 (372)
400 2wyu_A Enoyl-[acyl carrier pro 94.2 0.04 1.4E-06 54.4 4.9 37 159-195 5-44 (261)
401 3ijr_A Oxidoreductase, short c 94.2 0.079 2.7E-06 53.4 7.2 39 158-196 43-82 (291)
402 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.2 0.061 2.1E-06 53.8 6.3 68 161-229 11-85 (321)
403 2h7i_A Enoyl-[acyl-carrier-pro 94.1 0.035 1.2E-06 55.1 4.4 37 159-195 4-43 (269)
404 3ip3_A Oxidoreductase, putativ 94.1 0.027 9.3E-07 58.1 3.7 66 163-229 3-78 (337)
405 1xq6_A Unknown protein; struct 94.1 0.063 2.2E-06 51.3 6.1 69 161-229 3-80 (253)
406 4gqa_A NAD binding oxidoreduct 94.1 0.02 6.8E-07 60.7 2.7 68 163-230 27-108 (412)
407 3orf_A Dihydropteridine reduct 94.1 0.054 1.9E-06 53.2 5.7 99 159-257 19-147 (251)
408 2dq4_A L-threonine 3-dehydroge 94.1 0.035 1.2E-06 57.2 4.5 90 161-255 164-263 (343)
409 4ekn_B Aspartate carbamoyltran 94.1 0.41 1.4E-05 49.7 12.4 66 160-225 149-225 (306)
410 4a8t_A Putrescine carbamoyltra 94.1 0.18 6.3E-06 53.1 9.9 95 159-254 172-292 (339)
411 2q3e_A UDP-glucose 6-dehydroge 94.1 0.083 2.9E-06 57.4 7.6 96 159-257 326-445 (467)
412 2x0j_A Malate dehydrogenase; o 94.0 0.066 2.2E-06 55.3 6.4 98 163-263 1-125 (294)
413 3hhp_A Malate dehydrogenase; M 94.0 0.13 4.4E-06 53.4 8.6 100 163-264 1-126 (312)
414 1ooe_A Dihydropteridine reduct 94.0 0.063 2.2E-06 51.9 5.9 37 161-197 2-39 (236)
415 4gmf_A Yersiniabactin biosynth 94.0 0.024 8E-07 60.3 3.0 67 162-229 7-77 (372)
416 1qyc_A Phenylcoumaran benzylic 94.0 0.059 2E-06 53.6 5.7 66 162-227 4-86 (308)
417 2ejw_A HDH, homoserine dehydro 93.9 0.07 2.4E-06 56.0 6.4 102 163-271 4-116 (332)
418 4eye_A Probable oxidoreductase 93.9 0.03 1E-06 57.8 3.6 88 161-254 159-257 (342)
419 2a35_A Hypothetical protein PA 93.9 0.094 3.2E-06 49.1 6.7 68 161-230 4-77 (215)
420 1sb8_A WBPP; epimerase, 4-epim 93.9 0.06 2E-06 54.9 5.7 71 159-229 24-113 (352)
421 1v3u_A Leukotriene B4 12- hydr 93.9 0.026 8.9E-07 57.8 3.0 35 161-195 145-180 (333)
422 3s2e_A Zinc-containing alcohol 93.8 0.031 1.1E-06 57.4 3.5 89 161-254 166-263 (340)
423 4ina_A Saccharopine dehydrogen 93.8 0.031 1.1E-06 59.7 3.6 34 163-196 2-38 (405)
424 4h31_A Otcase, ornithine carba 93.8 0.55 1.9E-05 49.7 13.1 96 159-254 178-300 (358)
425 2h6e_A ADH-4, D-arabinose 1-de 93.8 0.025 8.6E-07 58.3 2.8 37 161-197 170-208 (344)
426 1n7h_A GDP-D-mannose-4,6-dehyd 93.8 0.059 2E-06 55.6 5.6 34 163-196 29-63 (381)
427 1qsg_A Enoyl-[acyl-carrier-pro 93.8 0.065 2.2E-06 52.9 5.6 37 159-195 6-45 (265)
428 1dih_A Dihydrodipicolinate red 93.8 0.067 2.3E-06 54.4 5.8 65 162-226 5-80 (273)
429 1qyd_A Pinoresinol-lariciresin 93.7 0.078 2.7E-06 52.8 6.2 68 162-229 4-87 (313)
430 1vkn_A N-acetyl-gamma-glutamyl 93.7 0.17 5.7E-06 53.6 8.9 97 163-266 14-119 (351)
431 3grk_A Enoyl-(acyl-carrier-pro 93.7 0.085 2.9E-06 53.3 6.4 39 157-195 26-67 (293)
432 2wm3_A NMRA-like family domain 93.7 0.064 2.2E-06 53.4 5.4 66 162-227 5-81 (299)
433 3aog_A Glutamate dehydrogenase 93.7 0.11 3.7E-06 56.6 7.6 106 159-274 232-358 (440)
434 2b69_A UDP-glucuronate decarbo 93.7 0.15 5.2E-06 51.7 8.3 72 158-229 23-102 (343)
435 2a4k_A 3-oxoacyl-[acyl carrier 93.7 0.068 2.3E-06 53.1 5.5 37 159-195 3-40 (263)
436 3enk_A UDP-glucose 4-epimerase 93.7 0.14 4.9E-06 51.6 8.0 69 161-229 4-89 (341)
437 1e6u_A GDP-fucose synthetase; 93.7 0.18 6.2E-06 50.3 8.7 61 162-229 3-66 (321)
438 1n2s_A DTDP-4-, DTDP-glucose o 93.6 0.14 4.9E-06 50.5 7.7 62 163-229 1-65 (299)
439 2q1s_A Putative nucleotide sug 93.6 0.085 2.9E-06 54.6 6.3 71 159-229 29-110 (377)
440 1dhr_A Dihydropteridine reduct 93.6 0.1 3.5E-06 50.7 6.5 38 160-197 5-43 (241)
441 3dr3_A N-acetyl-gamma-glutamyl 93.6 0.085 2.9E-06 55.5 6.2 92 163-259 5-111 (337)
442 2y0c_A BCEC, UDP-glucose dehyd 93.5 0.12 4.2E-06 56.5 7.7 100 159-263 325-446 (478)
443 4a8p_A Putrescine carbamoyltra 93.5 0.22 7.5E-06 52.8 9.4 94 159-253 150-269 (355)
444 3uce_A Dehydrogenase; rossmann 93.5 0.067 2.3E-06 51.4 5.0 91 159-256 3-118 (223)
445 3oqb_A Oxidoreductase; structu 93.5 0.11 3.7E-06 54.3 7.0 68 163-230 7-95 (383)
446 1cf2_P Protein (glyceraldehyde 93.5 0.068 2.3E-06 56.0 5.4 67 163-229 2-89 (337)
447 3ijp_A DHPR, dihydrodipicolina 93.5 0.15 5.2E-06 52.5 7.9 88 163-256 22-121 (288)
448 3mtj_A Homoserine dehydrogenas 93.5 0.055 1.9E-06 59.0 4.8 107 163-274 11-131 (444)
449 2zcu_A Uncharacterized oxidore 93.4 0.033 1.1E-06 54.8 2.7 65 164-228 1-75 (286)
450 3rft_A Uronate dehydrogenase; 93.4 0.055 1.9E-06 53.5 4.3 68 161-228 2-74 (267)
451 3goh_A Alcohol dehydrogenase, 93.4 0.039 1.3E-06 56.1 3.3 87 161-254 142-229 (315)
452 2ydy_A Methionine adenosyltran 93.4 0.082 2.8E-06 52.8 5.6 66 162-228 2-70 (315)
453 3r3s_A Oxidoreductase; structu 93.4 0.14 4.9E-06 51.6 7.4 37 158-194 45-82 (294)
454 2yyy_A Glyceraldehyde-3-phosph 93.4 0.078 2.7E-06 55.8 5.6 87 163-253 3-112 (343)
455 1o6z_A MDH, malate dehydrogena 93.4 0.14 4.7E-06 52.6 7.4 94 163-256 1-121 (303)
456 2hun_A 336AA long hypothetical 93.4 0.13 4.3E-06 51.9 7.0 68 162-229 3-86 (336)
457 4ej6_A Putative zinc-binding d 93.4 0.042 1.4E-06 57.5 3.6 90 161-255 182-285 (370)
458 2jl1_A Triphenylmethane reduct 93.4 0.037 1.3E-06 54.5 3.0 66 163-228 1-76 (287)
459 2tmg_A Protein (glutamate dehy 93.4 0.2 6.8E-06 54.2 8.9 106 159-274 206-333 (415)
460 4gx0_A TRKA domain protein; me 93.3 0.1 3.5E-06 57.6 6.8 87 163-252 349-440 (565)
461 3sxp_A ADP-L-glycero-D-mannohe 93.3 0.17 5.7E-06 51.9 7.9 38 159-196 7-47 (362)
462 3gms_A Putative NADPH:quinone 93.3 0.039 1.3E-06 56.8 3.1 38 161-198 144-182 (340)
463 1js1_X Transcarbamylase; alpha 93.3 0.22 7.7E-06 52.1 8.9 66 160-226 167-237 (324)
464 3e5r_O PP38, glyceraldehyde-3- 93.3 0.12 4.2E-06 54.2 6.9 31 163-193 4-35 (337)
465 1oc2_A DTDP-glucose 4,6-dehydr 93.3 0.12 4.2E-06 52.2 6.8 67 163-229 5-86 (348)
466 2r00_A Aspartate-semialdehyde 93.3 0.074 2.5E-06 55.7 5.2 89 163-256 4-98 (336)
467 4fcc_A Glutamate dehydrogenase 93.3 0.083 2.8E-06 57.7 5.7 109 158-274 231-368 (450)
468 3c8m_A Homoserine dehydrogenas 93.3 0.13 4.3E-06 53.7 7.0 110 163-273 7-141 (331)
469 2x4g_A Nucleoside-diphosphate- 93.2 0.098 3.4E-06 52.7 6.0 66 163-228 14-87 (342)
470 1orr_A CDP-tyvelose-2-epimeras 93.2 0.15 5.1E-06 51.4 7.3 67 163-229 2-84 (347)
471 4h3v_A Oxidoreductase domain p 93.1 0.027 9.3E-07 58.2 1.6 68 163-230 7-87 (390)
472 1u8f_O GAPDH, glyceraldehyde-3 93.0 0.24 8.3E-06 51.8 8.7 89 163-256 4-124 (335)
473 1uzm_A 3-oxoacyl-[acyl-carrier 93.0 0.12 4.1E-06 50.6 5.9 39 159-197 12-51 (247)
474 1t2a_A GDP-mannose 4,6 dehydra 93.0 0.14 4.7E-06 52.7 6.7 34 163-196 25-59 (375)
475 1f8f_A Benzyl alcohol dehydrog 93.0 0.037 1.3E-06 57.6 2.4 37 161-197 190-227 (371)
476 3cps_A Glyceraldehyde 3-phosph 93.0 0.26 9.1E-06 52.1 8.9 88 163-255 18-139 (354)
477 2j3h_A NADP-dependent oxidored 92.9 0.038 1.3E-06 56.8 2.2 36 161-196 155-191 (345)
478 2p4h_X Vestitone reductase; NA 92.9 0.15 5.1E-06 50.9 6.6 65 162-226 1-82 (322)
479 2c5a_A GDP-mannose-3', 5'-epim 92.8 0.13 4.6E-06 53.2 6.4 68 161-228 28-103 (379)
480 2c0c_A Zinc binding alcohol de 92.8 0.039 1.3E-06 57.6 2.2 89 161-255 163-262 (362)
481 3upl_A Oxidoreductase; rossman 92.8 0.069 2.4E-06 58.3 4.3 106 163-272 24-158 (446)
482 4fs3_A Enoyl-[acyl-carrier-pro 92.8 0.12 3.9E-06 51.4 5.6 39 158-196 2-43 (256)
483 1pjq_A CYSG, siroheme synthase 92.7 0.79 2.7E-05 49.7 12.5 38 158-195 8-45 (457)
484 1y8q_A Ubiquitin-like 1 activa 92.7 0.16 5.6E-06 53.2 6.8 39 157-195 31-70 (346)
485 1vj0_A Alcohol dehydrogenase, 92.6 0.059 2E-06 56.6 3.4 37 161-197 195-232 (380)
486 1mv8_A GMD, GDP-mannose 6-dehy 92.6 0.089 3E-06 56.6 4.8 87 161-253 312-419 (436)
487 4b7c_A Probable oxidoreductase 92.6 0.033 1.1E-06 57.0 1.5 90 161-256 149-250 (336)
488 1nvm_B Acetaldehyde dehydrogen 92.6 0.1 3.5E-06 54.0 5.1 65 163-227 5-80 (312)
489 2o3j_A UDP-glucose 6-dehydroge 92.6 0.18 6.1E-06 55.1 7.3 104 159-266 332-457 (481)
490 3qwb_A Probable quinone oxidor 92.6 0.041 1.4E-06 56.4 2.0 36 161-196 148-184 (334)
491 2csu_A 457AA long hypothetical 92.6 0.21 7E-06 54.4 7.6 107 160-274 6-123 (457)
492 3d7l_A LIN1944 protein; APC893 92.5 0.089 3E-06 49.2 4.2 59 164-227 5-67 (202)
493 1v9l_A Glutamate dehydrogenase 92.5 0.25 8.7E-06 53.5 8.2 35 159-193 207-242 (421)
494 1p9l_A Dihydrodipicolinate red 92.5 0.4 1.4E-05 48.1 9.1 50 163-227 1-54 (245)
495 4dup_A Quinone oxidoreductase; 92.5 0.037 1.3E-06 57.4 1.6 142 161-331 167-320 (353)
496 2rh8_A Anthocyanidin reductase 92.5 0.18 6E-06 50.9 6.6 65 162-226 9-88 (338)
497 2gn4_A FLAA1 protein, UDP-GLCN 92.4 0.082 2.8E-06 54.5 4.1 70 160-229 19-102 (344)
498 3ay3_A NAD-dependent epimerase 92.4 0.086 2.9E-06 51.7 4.0 67 163-229 3-74 (267)
499 3fpc_A NADP-dependent alcohol 92.4 0.047 1.6E-06 56.5 2.2 89 161-254 166-266 (352)
500 4g65_A TRK system potassium up 92.4 0.046 1.6E-06 59.6 2.2 68 162-229 3-79 (461)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=7.3e-63 Score=522.43 Aligned_cols=314 Identities=21% Similarity=0.258 Sum_probs=274.3
Q ss_pred CCCCEEEEeCCCCCChhHHhhccCCceEEecCC-CCCcc----cccccceEEEEecCCCCCHHHHhcC-CCCeEEEEecc
Q 007040 17 TPLPSVVALNCIEDCVLEQDSLAGVALVEHVPL-GRLAD----GKIEAAAAVLLHSLAYLPRAAQRRL-RPYQLILCLGS 90 (620)
Q Consensus 17 ~~kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~-~~l~e----~~l~~AdaVlv~s~~~l~~e~l~~l-p~LK~I~~~ga 90 (620)
+++|+|++...+.+ ...+.|+...++..... ..++. +.++++|+++++...++++++++++ |+||||++.|+
T Consensus 26 ~~~~kvlv~~~~~~--~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~ 103 (345)
T 4g2n_A 26 HPIQKAFLCRRFTP--AIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSV 103 (345)
T ss_dssp -CCCEEEESSCCCH--HHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSS
T ss_pred CCCCEEEEeCCCCH--HHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCC
Confidence 46899999876533 33455665567765432 22222 4578999999987778999999998 79999999999
Q ss_pred cCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeC
Q 007040 91 SDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGR 170 (620)
Q Consensus 91 G~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGl 170 (620)
|+|+||+++|.++||.|+|+||+++++||||++++||+++|+++.+++. .+++.|...... .....+|+|++|||||+
T Consensus 104 G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~-~r~g~W~~~~~~-~~~g~~l~gktvGIIGl 181 (345)
T 4g2n_A 104 GYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRM-VRSGSWPGWGPT-QLLGMGLTGRRLGIFGM 181 (345)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHH-HHTTCCCCCCTT-TTCBCCCTTCEEEEESC
T ss_pred cccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHH-HHcCCCcccCcc-cccccccCCCEEEEEEe
Confidence 9999999999999999999999999999999999999999999999987 588999743211 12246899999999999
Q ss_pred ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEE
Q 007040 171 SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFL 250 (620)
Q Consensus 171 G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiL 250 (620)
|+||+++|++|++|||+|++||++...... ..+....+++++++++||+|++|||+|++|+++|+++.|+.||+|++|
T Consensus 182 G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gail 259 (345)
T 4g2n_A 182 GRIGRAIATRARGFGLAIHYHNRTRLSHAL--EEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVV 259 (345)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECSSCCCHHH--HTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEE
T ss_pred ChhHHHHHHHHHHCCCEEEEECCCCcchhh--hcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEE
Confidence 999999999999999999999998744321 125555579999999999999999999999999999999999999999
Q ss_pred EEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 251 VNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 251 INvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
||+|||++||++||+++|++|+|+||+||||++||+.++|||++||||+|||+|++|.++..++.+.+++||.+|+ +|+
T Consensus 260 IN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l-~g~ 338 (345)
T 4g2n_A 260 INISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALN-QSD 338 (345)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred EECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHH-cCC
Confidence 9999999999999999999999999999999986689999999999999999999999999999999999999996 899
Q ss_pred CCCcccc
Q 007040 331 IPKNAIS 337 (620)
Q Consensus 331 ~p~nvVn 337 (620)
+|.|+|+
T Consensus 339 ~~~~~V~ 345 (345)
T 4g2n_A 339 VPDNLIS 345 (345)
T ss_dssp CCTTBCC
T ss_pred CCCCCcC
Confidence 8999885
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=7.6e-64 Score=527.73 Aligned_cols=299 Identities=22% Similarity=0.348 Sum_probs=259.7
Q ss_pred ChhHHhhccCCc-eEEecCCCCCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEE
Q 007040 31 CVLEQDSLAGVA-LVEHVPLGRLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIH 109 (620)
Q Consensus 31 ~~~~~~~L~~l~-~v~~~~~~~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtN 109 (620)
.++..+.|+++. ++...+...++++.+++||+++++..+++++++++++|+||+|+++|+|+||||+++|+++||.|+|
T Consensus 13 ~p~~~e~l~~~~~~~~~~~~~~~~~~~l~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n 92 (334)
T 3kb6_A 13 VPFYQEALKDLSLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTH 92 (334)
T ss_dssp HHHHHHHTTTSCEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEEC
T ss_pred CHHHHHHHHhCCcEEEeCCcccCCHHHhcCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEE
Confidence 355567788763 2222233445566788999999998889999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEE
Q 007040 110 VDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVL 189 (620)
Q Consensus 110 tpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~ 189 (620)
+||+++.+||||+++++|++.|++..+... .+.+.|..... ...++++|+||||||+|+||+.+|+++++|||+|+
T Consensus 93 ~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~-~~~~~~~~~~~---~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~ 168 (334)
T 3kb6_A 93 IPAYSPESVAEHTFAMILTLVKRLKRIEDR-VKKLNFSQDSE---ILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL 168 (334)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCCCGG---GCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCcHHHHHHHHHHHHHHhhcccccccc-ccccccccccc---cccceecCcEEEEECcchHHHHHHHhhcccCceee
Confidence 999999999999999999999999998886 57778764322 23468999999999999999999999999999999
Q ss_pred EECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHH
Q 007040 190 YFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLI 269 (620)
Q Consensus 190 ~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~ 269 (620)
+||++..... ...++ ...+|++++++||+|++|||+|++|+||||++.|++||+|++|||+|||++||++||++||+
T Consensus 169 ~~d~~~~~~~--~~~~~-~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 169 CYDVVKREDL--KEKGC-VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp EECSSCCHHH--HHTTC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred ecCCccchhh--hhcCc-eecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHH
Confidence 9998764322 12223 34699999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEeecCCC-CCCCCc---------------cccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007040 270 DGTLAGCALDGAEG-PQWMEA---------------WVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPK 333 (620)
Q Consensus 270 ~G~I~GAaLDV~E~-P~~~~s---------------pL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~ 333 (620)
+|+|+||+||||++ |++.++ |||.+|||++|||+||+|.+++.++.+.+++||.+|+ +|++|.
T Consensus 246 ~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l-~Ge~~~ 324 (334)
T 3kb6_A 246 RGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFV-KGDLEQ 324 (334)
T ss_dssp TTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH-HTCGGG
T ss_pred hCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHH-cCCCCc
Confidence 99999999999997 544333 6899999999999999999999999999999999997 898776
Q ss_pred cccc
Q 007040 334 NAIS 337 (620)
Q Consensus 334 nvVn 337 (620)
..+|
T Consensus 325 ~~~n 328 (334)
T 3kb6_A 325 IKGN 328 (334)
T ss_dssp GGGG
T ss_pred CCCC
Confidence 5443
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=3.7e-61 Score=506.40 Aligned_cols=314 Identities=22% Similarity=0.249 Sum_probs=274.0
Q ss_pred CCEEEEeCCCCCChhHHhhccCCceEEecCCC-CCcc----cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCC
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGVALVEHVPLG-RLAD----GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDR 93 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~-~l~e----~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D 93 (620)
+|+|+++..+. +...+.|+...++...+.. .++. +.++++|++++.....+++++++++|+||||++.|+|+|
T Consensus 2 ~~kvlv~~~~~--~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d 79 (330)
T 4e5n_A 2 LPKLVITHRVH--EEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCALKGFD 79 (330)
T ss_dssp CCEEEECSCCC--HHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESSSCCT
T ss_pred CCEEEEecCCC--HHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCccc
Confidence 68899887643 3456677777777654322 2222 457889999997777899999999999999999999999
Q ss_pred ccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChh
Q 007040 94 TVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSAS 173 (620)
Q Consensus 94 ~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~I 173 (620)
+||+++|.++||.|+|+|++++.+||||+++++|+++|+++.+++. .+++.|.... + .....+|+|++|||||+|+|
T Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~w~~~~-~-~~~~~~l~g~tvGIIG~G~I 156 (330)
T 4e5n_A 80 NFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAF-VRSGKFRGWQ-P-RFYGTGLDNATVGFLGMGAI 156 (330)
T ss_dssp TBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCSCC-S-CCCCCCSTTCEEEEECCSHH
T ss_pred ccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHH-HHhCCccccC-c-cccCCccCCCEEEEEeeCHH
Confidence 9999999999999999999999999999999999999999999887 5888886321 1 12246899999999999999
Q ss_pred hHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 174 ARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 174 G~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
|+.+|++|++|||+|++||++..........++.. .++++++++||+|++|||+|++|+++|+++.|+.||+|++|||+
T Consensus 157 G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ 235 (330)
T 4e5n_A 157 GLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNP 235 (330)
T ss_dssp HHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEEC
Confidence 99999999999999999999874332222234433 48999999999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHcCCcceeEeecCCC--------CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 007040 254 GSSQLLDDCAVKQLLIDGTLAGCALDGAEG--------PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTF 325 (620)
Q Consensus 254 gRG~vVDe~AL~~AL~~G~I~GAaLDV~E~--------P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~ 325 (620)
|||+++|++||+++|++|+|+||+||||++ |++.++|||++||||+|||+||+|.++..++.+.+++||.+|
T Consensus 236 arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~ 315 (330)
T 4e5n_A 236 CRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQA 315 (330)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999985 447899999999999999999999999999999999999999
Q ss_pred HHcCCCCCccccCC
Q 007040 326 FFDGVIPKNAISDT 339 (620)
Q Consensus 326 L~~G~~p~nvVn~~ 339 (620)
+ +|++|.|+||+.
T Consensus 316 ~-~g~~~~~~vn~~ 328 (330)
T 4e5n_A 316 L-AGERPINAVNRL 328 (330)
T ss_dssp H-TTSCCTTBSSCC
T ss_pred H-cCCCCCCccCCC
Confidence 6 899999999974
No 4
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-61 Score=511.30 Aligned_cols=310 Identities=24% Similarity=0.296 Sum_probs=239.8
Q ss_pred CCCCCEEEEeCCCCCChhHHhhccCCceEEecCCC----CCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEeccc
Q 007040 16 PTPLPSVVALNCIEDCVLEQDSLAGVALVEHVPLG----RLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSS 91 (620)
Q Consensus 16 ~~~kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~----~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG 91 (620)
.|++|+|+++..+. +...+.|+..+++..+... ++. +.++++|++++++.+++++++++++|+||||++.|+|
T Consensus 27 ~~~~~~vl~~~~~~--~~~~~~L~~~~~v~~~~~~~~~~~~~-~~~~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G 103 (340)
T 4dgs_A 27 RNVKPDLLLVEPMM--PFVMDELQRNYSVHRLYQAADRPALE-AALPSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVG 103 (340)
T ss_dssp ------CEECSCCC--HHHHHTHHHHSCCEETTCGGGHHHHH-HHGGGCCEEEEETTTCBCHHHHHHCSSCCEEEEESSC
T ss_pred CCCCCEEEEECCCC--HHHHHHHhcCCcEEEeCCCCCHHHHH-HHhCCcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCC
Confidence 35789999987653 3334455554555544211 111 2347899999988788999999999999999999999
Q ss_pred CCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCC
Q 007040 92 DRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRS 171 (620)
Q Consensus 92 ~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG 171 (620)
+|+||+++|+++||.|+|+||+++++||||++++||+++|+++.+++. .+++.|..... .....+|+|++|||||+|
T Consensus 104 ~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~-~~~g~W~~~~~--~~~~~~l~gktiGIIGlG 180 (340)
T 4dgs_A 104 TDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRL-VREGRWAAGEQ--LPLGHSPKGKRIGVLGLG 180 (340)
T ss_dssp CTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCC--------CCCCCCTTCEEEEECCS
T ss_pred ccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHH-HhcCCcccccC--cCccccccCCEEEEECCC
Confidence 999999999999999999999999999999999999999999999987 58999975310 012368999999999999
Q ss_pred hhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEE
Q 007040 172 ASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLV 251 (620)
Q Consensus 172 ~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLI 251 (620)
+||+++|++|++|||+|++||++..... +.....++++++++||+|++|+|++++|+++|+++.|+.||+|++||
T Consensus 181 ~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailI 255 (340)
T 4dgs_A 181 QIGRALASRAEAFGMSVRYWNRSTLSGV-----DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVV 255 (340)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCTTS-----CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCccccc-----CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEE
Confidence 9999999999999999999999875422 23445799999999999999999999999999999999999999999
Q ss_pred EcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCC
Q 007040 252 NTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVI 331 (620)
Q Consensus 252 NvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~ 331 (620)
|++||+++|++||+++|++|+|+||+||||++||.+.+|||++|||++|||+|++|.++..++.+.+++||.+|+ +|++
T Consensus 256 N~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~-~g~~ 334 (340)
T 4dgs_A 256 NVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHF-AGEK 334 (340)
T ss_dssp ECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHH-TTSC
T ss_pred ECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 999999999999999999999999999999986666679999999999999999999999999999999999997 8999
Q ss_pred CCcccc
Q 007040 332 PKNAIS 337 (620)
Q Consensus 332 p~nvVn 337 (620)
|.|.||
T Consensus 335 ~~~~Vn 340 (340)
T 4dgs_A 335 APNTVN 340 (340)
T ss_dssp CTTBC-
T ss_pred CCCCcC
Confidence 999987
No 5
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=2.1e-61 Score=507.30 Aligned_cols=311 Identities=17% Similarity=0.206 Sum_probs=263.2
Q ss_pred EEEEeCCCCCChhHHhhccCCc-eEEecCCCCCcccccccceEEEEecCCCCCHHHH-hcCCCCeEEEEecccCCccchH
Q 007040 21 SVVALNCIEDCVLEQDSLAGVA-LVEHVPLGRLADGKIEAAAAVLLHSLAYLPRAAQ-RRLRPYQLILCLGSSDRTVDSA 98 (620)
Q Consensus 21 kVvvL~~~ed~~~~~~~L~~l~-~v~~~~~~~l~e~~l~~AdaVlv~s~~~l~~e~l-~~lp~LK~I~~~gaG~D~VD~~ 98 (620)
+|++...+.+ ...+.|+... ++......+..++.+.++|+++++.. .+ ++++ +++|+||||++.|+|+|+||++
T Consensus 3 kil~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~ad~l~~~~~-~~-~~~l~~~~~~Lk~I~~~~~G~d~id~~ 78 (324)
T 3evt_A 3 LVLMAQATKP--EQLQQLQTTYPDWTFKDAAAVTAADYDQIEVMYGNHP-LL-KTILARPTNQLKFVQVISAGVDYLPLK 78 (324)
T ss_dssp EEEECSCCCH--HHHHHHHHHCTTCEEEETTSCCTTTGGGEEEEESCCT-HH-HHHHHSTTCCCCEEECSSSCCTTSCHH
T ss_pred EEEEecCCCH--HHHHHHHhhCCCeEEecCCccChHHhCCcEEEEECCc-Ch-HHHHHhhCCCceEEEECCccccccCHH
Confidence 6777765433 2333444321 22222333455567889998887754 46 8888 7899999999999999999999
Q ss_pred HHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHH-HHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHH
Q 007040 99 LAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLL-ARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARAL 177 (620)
Q Consensus 99 aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~-~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~v 177 (620)
+|.++||.|+|+||+++.+||||+++++|+++|+++.+ .+. .+++.|.... ...+++|++|||||+|.||+++
T Consensus 79 ~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~-~~~~~W~~~~-----~~~~l~gktvGIiGlG~IG~~v 152 (324)
T 3evt_A 79 ALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQ-RGARQWALPM-----TTSTLTGQQLLIYGTGQIGQSL 152 (324)
T ss_dssp HHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHH-TTTCCSSCSS-----CCCCSTTCEEEEECCSHHHHHH
T ss_pred HHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHH-HhcCCcccCC-----CCccccCCeEEEECcCHHHHHH
Confidence 99999999999999999999999999999999999998 665 5889997542 2468999999999999999999
Q ss_pred HHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 178 ATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 178 A~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
|++|++|||+|++||++...... + .......+|++++++||+|++|||+|++|+++|+++.|+.||+|++|||+|||+
T Consensus 153 A~~l~~~G~~V~~~dr~~~~~~~-~-~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 230 (324)
T 3evt_A 153 AAKASALGMHVIGVNTTGHPADH-F-HETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGP 230 (324)
T ss_dssp HHHHHHTTCEEEEEESSCCCCTT-C-SEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGG
T ss_pred HHHHHhCCCEEEEECCCcchhHh-H-hhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCCh
Confidence 99999999999999998754331 1 112345689999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 007040 258 LLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAI 336 (620)
Q Consensus 258 vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvV 336 (620)
++|++||+++|++|+|+||+||||++ |++.++|||++|||++|||+||+|.++..++.+.+++||.+|+..|++|.|+|
T Consensus 231 ~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V 310 (324)
T 3evt_A 231 AVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQV 310 (324)
T ss_dssp GBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBC
T ss_pred hhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceE
Confidence 99999999999999999999999996 66889999999999999999999999999999999999999987788899999
Q ss_pred cCCCCcc
Q 007040 337 SDTEGCE 343 (620)
Q Consensus 337 n~~~~y~ 343 (620)
|...+|+
T Consensus 311 ~~~~~~~ 317 (324)
T 3evt_A 311 DLNRGYE 317 (324)
T ss_dssp C------
T ss_pred CcccccC
Confidence 9998873
No 6
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=6.1e-61 Score=505.60 Aligned_cols=312 Identities=22% Similarity=0.330 Sum_probs=267.5
Q ss_pred EEEEeCCCCCCh-hHHhhccCCceEEecCCC--CCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccch
Q 007040 21 SVVALNCIEDCV-LEQDSLAGVALVEHVPLG--RLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDS 97 (620)
Q Consensus 21 kVvvL~~~ed~~-~~~~~L~~l~~v~~~~~~--~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~ 97 (620)
||++.+..+... .....++.. +++.+... +...+.++++|+++++....+++++++++|+||||++.|+|+|+||+
T Consensus 2 ki~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~id~ 80 (334)
T 2pi1_A 2 NVLFTSVPQEDVPFYQEALKDL-SLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDL 80 (334)
T ss_dssp EEEECSCCTTHHHHHHHHTTTS-EEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBCH
T ss_pred EEEEEccChhhHHHHHHHhhcC-CEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCccccccCH
Confidence 566655433322 223344443 55554321 11224578899999987779999999999999999999999999999
Q ss_pred HHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHH
Q 007040 98 ALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARAL 177 (620)
Q Consensus 98 ~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~v 177 (620)
++|+++||.|+|+|++++.+||||++++||+++|+++.+++. .+++.|..... ....+|+|++|||||+|.||+++
T Consensus 81 ~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~w~~~~~---~~~~~l~g~tvgIiG~G~IG~~v 156 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDR-VKKLNFSQDSE---ILARELNRLTLGVIGTGRIGSRV 156 (334)
T ss_dssp HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHH-HTTTCCCCCGG---GCBCCGGGSEEEEECCSHHHHHH
T ss_pred HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHH-HHcCCCccccC---ccceeccCceEEEECcCHHHHHH
Confidence 999999999999999999999999999999999999999987 58899974311 12468999999999999999999
Q ss_pred HHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 178 ATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 178 A~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
|++|++|||+|++||++..... ...+... .++++++++||+|++|||+|++|+++|+++.|+.||+|++|||+|||+
T Consensus 157 A~~l~~~G~~V~~~d~~~~~~~--~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~ 233 (334)
T 2pi1_A 157 AMYGLAFGMKVLCYDVVKREDL--KEKGCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGK 233 (334)
T ss_dssp HHHHHHTTCEEEEECSSCCHHH--HHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHCcCEEEEECCCcchhh--HhcCcee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999875432 1234443 469999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHHHHcCCcceeEeecCCC-CC---------------CCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 007040 258 LLDDCAVKQLLIDGTLAGCALDGAEG-PQ---------------WMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISV 321 (620)
Q Consensus 258 vVDe~AL~~AL~~G~I~GAaLDV~E~-P~---------------~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~en 321 (620)
++|++||+++|++|+|+||+||||++ |+ +.++|||++||||+|||+||+|.++..++.+.+++|
T Consensus 234 ~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 313 (334)
T 2pi1_A 234 VVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKV 313 (334)
T ss_dssp GBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 44 468899999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccccCCCC
Q 007040 322 LQTFFFDGVIPKNAISDTEG 341 (620)
Q Consensus 322 L~~~L~~G~~p~nvVn~~~~ 341 (620)
|.+|+ +|++|.|+||...|
T Consensus 314 i~~~~-~g~~~~~~Vn~~~g 332 (334)
T 2pi1_A 314 VKAFV-KGDLEQIKGNFVVG 332 (334)
T ss_dssp HHHHH-HTCGGGGGGGEEEC
T ss_pred HHHHH-cCCCCCceECcccC
Confidence 99997 89999999997665
No 7
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=9e-60 Score=508.97 Aligned_cols=314 Identities=24% Similarity=0.317 Sum_probs=264.4
Q ss_pred CCCCCCCCCEEEEeCCCCCChhHHhhccCC--ceEEecCCCCCc----ccccccceEEEEecCCCCCHHHHhcCCCCeEE
Q 007040 12 HRDNPTPLPSVVALNCIEDCVLEQDSLAGV--ALVEHVPLGRLA----DGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLI 85 (620)
Q Consensus 12 ~~~~~~~kPkVvvL~~~ed~~~~~~~L~~l--~~v~~~~~~~l~----e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I 85 (620)
....++++++|++++.+.+ ...+.|+.. .++...+. .++ .+.++++|++++++.+.+++++++++|+||+|
T Consensus 8 ~~~~~~~~~kIl~~~~i~~--~~~~~l~~~g~~~v~~~~~-~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I 84 (416)
T 3k5p_A 8 RLSLSRDRINVLLLEGISQ--TAVEYFKSSGYTNVTHLPK-ALDKADLIKAISSAHIIGIRSRTQLTEEIFAAANRLIAV 84 (416)
T ss_dssp ----CGGGSCEEECSCCCH--HHHHHHHHTTCCCEEECSS-CCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEE
T ss_pred ccCCCCCCcEEEEECCCCH--HHHHHHHHCCCcEEEECCC-CCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEE
Confidence 3344566788999976543 233445433 25655432 222 24578899998888889999999999999999
Q ss_pred EEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEE
Q 007040 86 LCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVL 165 (620)
Q Consensus 86 ~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktV 165 (620)
++.|+|+|+||+++|+++||.|+|+|++++++||||+++++|+++|+++.+++. .+++.|.... ....+++|++|
T Consensus 85 ~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~-~~~g~W~~~~----~~~~el~gktv 159 (416)
T 3k5p_A 85 GCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVS-AHAGGWEKTA----IGSREVRGKTL 159 (416)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCCCC----TTCCCSTTCEE
T ss_pred EECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHh-hhcccccccC----CCCccCCCCEE
Confidence 999999999999999999999999999999999999999999999999999887 5889997542 23468999999
Q ss_pred EEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccC
Q 007040 166 GIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIK 245 (620)
Q Consensus 166 GIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK 245 (620)
||||+|+||+.+|++|++|||+|++||++..... .+.....+|++++++||+|++|||++++|+++|+++.|+.||
T Consensus 160 GIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk 235 (416)
T 3k5p_A 160 GIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMK 235 (416)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSC
T ss_pred EEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCC
Confidence 9999999999999999999999999999753321 234456799999999999999999999999999999999999
Q ss_pred CCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCC----ccccCCCcEEEcCCCCCCcHHHHHHHHHHHHH
Q 007040 246 PGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWME----AWVREMPNVLILPRSADYSEEVWMEIRDKAIS 320 (620)
Q Consensus 246 ~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~----spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~e 320 (620)
+|++|||+|||+++|++||+++|++|+|+||+||||++ |++.+ +|||++||||+|||+||+|.|+..++...+++
T Consensus 236 ~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~ 315 (416)
T 3k5p_A 236 KGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTR 315 (416)
T ss_dssp TTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHH
T ss_pred CCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 44433 79999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccccC
Q 007040 321 VLQTFFFDGVIPKNAISD 338 (620)
Q Consensus 321 nL~~~L~~G~~p~nvVn~ 338 (620)
||.+|+..|. |.+.||.
T Consensus 316 nl~~~l~~g~-~~~~Vn~ 332 (416)
T 3k5p_A 316 KLVEYSDVGS-TVGAVNF 332 (416)
T ss_dssp HHHHHHHHCC-CTTBSSS
T ss_pred HHHHHHhhCC-CCceeeC
Confidence 9999985555 8888885
No 8
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=2.3e-60 Score=504.40 Aligned_cols=306 Identities=20% Similarity=0.265 Sum_probs=267.1
Q ss_pred HhhccCC-ceEEecCCCCC----cccccccceEEEEecC--CCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEE
Q 007040 35 QDSLAGV-ALVEHVPLGRL----ADGKIEAAAAVLLHSL--AYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRL 107 (620)
Q Consensus 35 ~~~L~~l-~~v~~~~~~~l----~e~~l~~AdaVlv~s~--~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~V 107 (620)
.+.|+.. .++..++.... ..+.++++|++++... .++++++++++|+||+|++.|+|+|+||+++|.++||.|
T Consensus 33 ~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~gI~V 112 (351)
T 3jtm_A 33 RDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTV 112 (351)
T ss_dssp HHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhcCeeE
Confidence 3445443 46665543322 2356889999998753 468999999999999999999999999999999999999
Q ss_pred EEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCE
Q 007040 108 IHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMS 187 (620)
Q Consensus 108 tNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~ 187 (620)
+|+||+++.+||||++++||+++|++..+++. .+++.|..... .....+|+|++|||||+|+||+.+|++|++|||+
T Consensus 113 ~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~W~~~~~--~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~ 189 (351)
T 3jtm_A 113 AEVTGSNVVSVAEDELMRILILMRNFVPGYNQ-VVKGEWNVAGI--AYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN 189 (351)
T ss_dssp EECTTTTHHHHHHHHHHHHHHHHHTHHHHHHH-HHTTCCCHHHH--HTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCE
T ss_pred EECCCcCchHHHHHHHHHHHHHhhCcHHHHHH-HHcCCCccccc--cCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCE
Confidence 99999999999999999999999999999886 58899974210 1123579999999999999999999999999999
Q ss_pred EEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 188 VLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 188 V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
|++||++..........++....++++++++||+|++|||+|++|+++|+++.|+.||+|++|||+|||+++|++||+++
T Consensus 190 V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~a 269 (351)
T 3jtm_A 190 LLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDA 269 (351)
T ss_dssp EEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHH
T ss_pred EEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHH
Confidence 99999986443322334556667999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCC--CCccccCCCCccC
Q 007040 268 LIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVI--PKNAISDTEGCEN 344 (620)
Q Consensus 268 L~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~--p~nvVn~~~~y~~ 344 (620)
|++|+|+||+||||++ |++.++|||++|||++|||+||+|.++..++...+++||.+|+ .|++ |.|+|+.+..|.+
T Consensus 270 L~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~-~g~~~~~~~~i~~~~~~~~ 348 (351)
T 3jtm_A 270 VESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYF-KGEDFPTENYIVKDGELAP 348 (351)
T ss_dssp HHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHH-HTCCCCGGGEEEETTEECG
T ss_pred HHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCCceEEecCCcccc
Confidence 9999999999999996 7788999999999999999999999999999999999999997 7774 9999998887754
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=1.9e-59 Score=497.52 Aligned_cols=317 Identities=22% Similarity=0.243 Sum_probs=272.2
Q ss_pred EEEEeCCCCCCh---hHHhhccCCceEEecCCCCCc----ccccccceEEEE-ecCCCCCHHHHhcCCCCeEEEEecccC
Q 007040 21 SVVALNCIEDCV---LEQDSLAGVALVEHVPLGRLA----DGKIEAAAAVLL-HSLAYLPRAAQRRLRPYQLILCLGSSD 92 (620)
Q Consensus 21 kVvvL~~~ed~~---~~~~~L~~l~~v~~~~~~~l~----e~~l~~AdaVlv-~s~~~l~~e~l~~lp~LK~I~~~gaG~ 92 (620)
+|++++...... ..++.|++ .++..++....+ .+.++++|++++ ++...+++++++++|+||+|++.|+|+
T Consensus 4 ki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~G~ 82 (352)
T 3gg9_A 4 KIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGRVS 82 (352)
T ss_dssp EEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEESSCCC
T ss_pred EEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCccc
Confidence 677777654432 12345655 577666532211 256789999998 466789999999999999999999999
Q ss_pred ----CccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCC------CCCCCcceeecC
Q 007040 93 ----RTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSV------QPLCRGMRRCRG 162 (620)
Q Consensus 93 ----D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~------~~~~~~~~~L~G 162 (620)
|+||+++|+++||.|+|+||+ +.+||||+++++|+++|+++.+++. .+++.|.... .+....+.+|+|
T Consensus 83 ~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~-~~~g~W~~~~~~~~~~~~~~~~~~~l~g 160 (352)
T 3gg9_A 83 RDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVAS-LKHGAWQQSGLKSTTMPPNFGIGRVLKG 160 (352)
T ss_dssp CSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCTTCCCCCCTTSCTTTTSBCCCTT
T ss_pred CCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHH-HHcCCCCcccccccccccccccCccCCC
Confidence 999999999999999999999 9999999999999999999999987 5789997532 111123478999
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQ 242 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~ 242 (620)
++|||||+|.||+++|++|++|||+|++||++... ......++....++++++++||+|++|||+|++|+++|+.+.|+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 99999999999999999999999999999998522 22233455666799999999999999999999999999999999
Q ss_pred ccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 007040 243 HIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISV 321 (620)
Q Consensus 243 ~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~en 321 (620)
.||+|++|||+|||+++|++||+++|++|+|+||+||||++ |++.++|||++||||+|||+||+|.++.+++.+.+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999996 66789999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccccCCCCcc
Q 007040 322 LQTFFFDGVIPKNAISDTEGCE 343 (620)
Q Consensus 322 L~~~L~~G~~p~nvVn~~~~y~ 343 (620)
|.+|+ +|+ |.|+||++...+
T Consensus 320 i~~~~-~G~-p~~~Vn~~~~~~ 339 (352)
T 3gg9_A 320 ILDIL-QGN-VDSVANPTALAP 339 (352)
T ss_dssp HHHHH-TTC-CTTBSCGGGSSC
T ss_pred HHHHH-cCC-CCcccCHHHHHH
Confidence 99997 886 679999766543
No 10
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=5.4e-60 Score=496.69 Aligned_cols=308 Identities=21% Similarity=0.245 Sum_probs=259.3
Q ss_pred CCEEEEeCCCCCChhHHhhc-cC-CceEEecCC--CCCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCc
Q 007040 19 LPSVVALNCIEDCVLEQDSL-AG-VALVEHVPL--GRLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRT 94 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L-~~-l~~v~~~~~--~~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~ 94 (620)
+-+|+++.... ....+.| +. ..+++.... .+...+.++++|+++++. .+++++++++|+||||++.|+|+|+
T Consensus 5 ~mkili~~~~~--~~~~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~ 80 (324)
T 3hg7_A 5 QRTLLLLSQDN--AHYERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAEP--ARAKPLLAKANKLSWFQSTYAGVDV 80 (324)
T ss_dssp CEEEEEESTTH--HHHHHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEECH--HHHGGGGGGCTTCCEEEESSSCCGG
T ss_pred ccEEEEecCCC--HHHHHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEECC--CCCHHHHhhCCCceEEEECCCCCCc
Confidence 34677776542 2334445 32 234433322 122235688999988763 3557789999999999999999999
Q ss_pred cchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhh
Q 007040 95 VDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASA 174 (620)
Q Consensus 95 VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG 174 (620)
||.+++.+ ||.|+|+||+++.+||||+++++|+++|+++.+++. .+++.|... ...+++|++|||||+|.||
T Consensus 81 id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~W~~~------~~~~l~g~tvGIIGlG~IG 152 (324)
T 3hg7_A 81 LLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQ-QKQRLWQSH------PYQGLKGRTLLILGTGSIG 152 (324)
T ss_dssp GSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCCC------CCCCSTTCEEEEECCSHHH
T ss_pred cChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHH-HhhCCCcCC------CCcccccceEEEEEECHHH
Confidence 99988865 999999999999999999999999999999999987 588999743 2358999999999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 175 RALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 175 ~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+++|++|++|||+|++||+++.... .+ .......+|++++++||+|++|||+|++|+++|+.+.|+.||+|++|||+|
T Consensus 153 ~~vA~~l~~~G~~V~~~dr~~~~~~-~~-~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~a 230 (324)
T 3hg7_A 153 QHIAHTGKHFGMKVLGVSRSGRERA-GF-DQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG 230 (324)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCCCT-TC-SEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECS
T ss_pred HHHHHHHHhCCCEEEEEcCChHHhh-hh-hcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 9999999999999999999874332 11 223345689999999999999999999999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007040 255 SSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPK 333 (620)
Q Consensus 255 RG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~ 333 (620)
||+++|++||+++|++|+|+||+||||++ |++.++|||++||||+|||+||+|.+ .++.+.+++||.+|+ +|++|.
T Consensus 231 RG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~-~G~~~~ 307 (324)
T 3hg7_A 231 RGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFI-DGQPLD 307 (324)
T ss_dssp CGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHH-TTCCCT
T ss_pred CchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHH-cCCCCc
Confidence 99999999999999999999999999996 76889999999999999999999976 579999999999996 999999
Q ss_pred ccccCCCCcc
Q 007040 334 NAISDTEGCE 343 (620)
Q Consensus 334 nvVn~~~~y~ 343 (620)
|+||++.+|+
T Consensus 308 ~~V~~~~~~~ 317 (324)
T 3hg7_A 308 GKIDFDKGYE 317 (324)
T ss_dssp TBCCCC----
T ss_pred ceEChhhhcc
Confidence 9999999885
No 11
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=3.7e-59 Score=497.29 Aligned_cols=313 Identities=18% Similarity=0.192 Sum_probs=259.8
Q ss_pred CCCEEEEeCCCCC-----ChhHHhhccCCceEEecCC---CCCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEe-
Q 007040 18 PLPSVVALNCIED-----CVLEQDSLAGVALVEHVPL---GRLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCL- 88 (620)
Q Consensus 18 ~kPkVvvL~~~ed-----~~~~~~~L~~l~~v~~~~~---~~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~- 88 (620)
.+|+|++...... .+...+.|+..+++..... +++.+..+.++++++. ..++++++++++|+||+|+..
T Consensus 27 ~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~p~Lk~I~~~~ 104 (365)
T 4hy3_A 27 ERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIG--QPPLSAETLARMPALRSILNVE 104 (365)
T ss_dssp -CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTCTTCCEEECCS
T ss_pred CCCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhCCCCeEEEEec
Confidence 4666666643222 1223556666667764432 2233334456666664 358999999999999999975
Q ss_pred cccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCC--CCCCCCCCCCcceeecCcEEE
Q 007040 89 GSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASG--WLGSVQPLCRGMRRCRGLVLG 166 (620)
Q Consensus 89 gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~--W~~~~~~~~~~~~~L~GktVG 166 (620)
|+|+|+||+++|+++||.|+|+|++++.+||||+++++|+++|++..+++. .+++. |.... .....+++|++||
T Consensus 105 ~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~-~r~g~~~w~~~~---~~~~~~l~gktvG 180 (365)
T 4hy3_A 105 SNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIA-FQEGTELWGGEG---NASARLIAGSEIG 180 (365)
T ss_dssp SSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHH-HHHTCCCCSSSS---TTSCCCSSSSEEE
T ss_pred ccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHH-HHcCCccccccc---cccccccCCCEEE
Confidence 889999999999999999999999999999999999999999999999887 47777 53321 1234689999999
Q ss_pred EEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCC
Q 007040 167 IVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKP 246 (620)
Q Consensus 167 IIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~ 246 (620)
|||+|.||+.+|++|++|||+|++||++... ......++. ..+|++++++||+|++|||+|++|+++|+++.|+.||+
T Consensus 181 IIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~ 258 (365)
T 4hy3_A 181 IVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENGVE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRR 258 (365)
T ss_dssp EECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTTCE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCT
T ss_pred EecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcCee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCC
Confidence 9999999999999999999999999998532 212223444 45899999999999999999999999999999999999
Q ss_pred CcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 007040 247 GAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTF 325 (620)
Q Consensus 247 gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~ 325 (620)
|++|||+|||++||++||+++|++|+|+ |+||||++ |++.++|||++|||++|||+||+|.++..++...+++||.+|
T Consensus 259 gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~ 337 (365)
T 4hy3_A 259 GAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLM 337 (365)
T ss_dssp TCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 99999996 667899999999999999999999999999999999999999
Q ss_pred HHcCCCCCccccCCC
Q 007040 326 FFDGVIPKNAISDTE 340 (620)
Q Consensus 326 L~~G~~p~nvVn~~~ 340 (620)
+ +|++|.++||.+.
T Consensus 338 ~-~G~~~~~~vn~~~ 351 (365)
T 4hy3_A 338 D-RGLPPMRCKRAER 351 (365)
T ss_dssp H-TTCCCCSSEECCS
T ss_pred H-cCCCcccccccch
Confidence 6 9999999998743
No 12
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=5.3e-59 Score=502.21 Aligned_cols=308 Identities=24% Similarity=0.253 Sum_probs=260.1
Q ss_pred CCEEEEeCCCCCChhHHhhccCC-c-eEEecCCCCCcc----cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccC
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGV-A-LVEHVPLGRLAD----GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSD 92 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l-~-~v~~~~~~~l~e----~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~ 92 (620)
+++|++++.+. +...+.|+.. . ++...+. .+++ +.++++|++++.+.+.+++++++++|+||+|+++|+|+
T Consensus 4 ~~kil~~~~~~--~~~~~~l~~~~~~~v~~~~~-~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 80 (404)
T 1sc6_A 4 KIKFLLVEGVH--QKALESLRAAGYTNIEFHKG-ALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGT 80 (404)
T ss_dssp SCCEEECSCCC--HHHHHHHHHTTCCCEEECSS-CCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSSCC
T ss_pred ceEEEEeCCCC--HHHHHHHHhCCCcEEEEcCC-CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECCccc
Confidence 45788876543 2233445433 2 5655432 2221 45789999998888899999999999999999999999
Q ss_pred CccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCCh
Q 007040 93 RTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSA 172 (620)
Q Consensus 93 D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~ 172 (620)
|+||+++|+++||.|+|+|++++.+||||++++||+++|+++.++.. .+++.|.... ....+++|++|||||+|+
T Consensus 81 d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~-~~~g~W~~~~----~~~~el~gktlGiIGlG~ 155 (404)
T 1sc6_A 81 NQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAK-AHRGVGNKLA----AGSFEARGKKLGIIGYGH 155 (404)
T ss_dssp TTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHH-HHHTCCC---------CCCSTTCEEEEECCSH
T ss_pred CccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHH-HHcCCccccC----CCccccCCCEEEEEeECH
Confidence 99999999999999999999999999999999999999999999887 5889996431 223689999999999999
Q ss_pred hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEE
Q 007040 173 SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 173 IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLIN 252 (620)
||+.+|++|++|||+|++||++..... .++....+|++++++||+|++|||++++|+++|+++.|+.||+|++|||
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~~----~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN 231 (404)
T 1sc6_A 156 IGTQLGILAESLGMYVYFYDIENKLPL----GNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLIN 231 (404)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCCC----TTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhcc----CCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEE
Confidence 999999999999999999999764321 1244556899999999999999999999999999999999999999999
Q ss_pred cCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCC----CCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 007040 253 TGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQW----MEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFF 327 (620)
Q Consensus 253 vgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~----~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~ 327 (620)
+|||+++|++||+++|++|+|+||+||||++ |++ .++|||++||||+|||+|++|.|+..++...+++||.+|+
T Consensus 232 ~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l- 310 (404)
T 1sc6_A 232 ASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYS- 310 (404)
T ss_dssp CSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999987 443 2579999999999999999999999999999999999997
Q ss_pred cCCCCCccccCC
Q 007040 328 DGVIPKNAISDT 339 (620)
Q Consensus 328 ~G~~p~nvVn~~ 339 (620)
.|..|.|.||.-
T Consensus 311 ~g~~~~~~vn~p 322 (404)
T 1sc6_A 311 DNGSTLSAVNFP 322 (404)
T ss_dssp HHCCCTTBSSSC
T ss_pred cCCCCcceeccc
Confidence 555689999843
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=8.2e-59 Score=491.11 Aligned_cols=311 Identities=20% Similarity=0.231 Sum_probs=257.2
Q ss_pred EEEEeCCCCC-ChhHHhhccCC-ceEEecCC--CCCcccccccceEEEEecCCCCCHH-HHhcCC--CCeEEEEecccCC
Q 007040 21 SVVALNCIED-CVLEQDSLAGV-ALVEHVPL--GRLADGKIEAAAAVLLHSLAYLPRA-AQRRLR--PYQLILCLGSSDR 93 (620)
Q Consensus 21 kVvvL~~~ed-~~~~~~~L~~l-~~v~~~~~--~~l~e~~l~~AdaVlv~s~~~l~~e-~l~~lp--~LK~I~~~gaG~D 93 (620)
||+++...+. .+...+.++.. .++...+. .+...+.++++|++++...++++++ +++++| +||+|++.|+|+|
T Consensus 3 ki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d 82 (343)
T 2yq5_A 3 KIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFN 82 (343)
T ss_dssp EEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCCT
T ss_pred eEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECceeec
Confidence 5666653222 22323333322 35555432 1222356889999999877899999 999986 5999999999999
Q ss_pred ccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHH-hCCCCCCCCCCCCcceeecCcEEEEEeCCh
Q 007040 94 TVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALS-ASGWLGSVQPLCRGMRRCRGLVLGIVGRSA 172 (620)
Q Consensus 94 ~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~-~g~W~~~~~~~~~~~~~L~GktVGIIGlG~ 172 (620)
+||+++|+++||.|+|+|++++++||||+++++|+++|++..+++.. + ++.|..... ...++|+|++|||||+|.
T Consensus 83 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~-~~~g~~~w~~~---~~~~~l~gktvgIiGlG~ 158 (343)
T 2yq5_A 83 TINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRM-DHDHDFTWPSN---LISNEIYNLTVGLIGVGH 158 (343)
T ss_dssp TBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHH-HHHCCCCCCGG---GCBCCGGGSEEEEECCSH
T ss_pred ccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHH-HHcCCcccccC---CCccccCCCeEEEEecCH
Confidence 99999999999999999999999999999999999999999998874 5 676642111 234689999999999999
Q ss_pred hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEE
Q 007040 173 SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 173 IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLIN 252 (620)
||+++|++|++|||+|++||++.... ...+. ...++++++++||+|++|||+|++|+++|+.+.|+.||+|++|||
T Consensus 159 IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~-~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 234 (343)
T 2yq5_A 159 IGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFL-TYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLIN 234 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCGG---GTTTC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHhhCCCEEEEECCChhhh---hhccc-cccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEE
Confidence 99999999999999999999987532 22223 334999999999999999999999999999999999999999999
Q ss_pred cCCChhhcHHHHHHHHHcCCcceeEeecCCCCC---CCC-----------ccccCCCcEEEcCCCCCCcHHHHHHHHHHH
Q 007040 253 TGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ---WME-----------AWVREMPNVLILPRSADYSEEVWMEIRDKA 318 (620)
Q Consensus 253 vgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~---~~~-----------spL~~~pNVIlTPHiAg~T~ea~~~~~~~a 318 (620)
+|||+++|++||+++|++|+|+||+||||++|| +.+ +|||++||||+|||+|++|.++..++.+.+
T Consensus 235 ~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~ 314 (343)
T 2yq5_A 235 CARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQIC 314 (343)
T ss_dssp CSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHH
T ss_pred CCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999743 334 589999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccCCC
Q 007040 319 ISVLQTFFFDGVIPKNAISDTE 340 (620)
Q Consensus 319 ~enL~~~L~~G~~p~nvVn~~~ 340 (620)
++||.+|+ +|+.|.|.||+..
T Consensus 315 ~~ni~~~l-~g~~~~~~v~~~~ 335 (343)
T 2yq5_A 315 LTDQLTIA-KGGRPRSIVNLTA 335 (343)
T ss_dssp HHHHHHHH-TTCCCTTBC----
T ss_pred HHHHHHHH-cCCCCCceECCcc
Confidence 99999996 8888999998754
No 14
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1.3e-58 Score=484.56 Aligned_cols=271 Identities=17% Similarity=0.207 Sum_probs=239.6
Q ss_pred ccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCcc-c-hHH---HHhcCcEEEEcCCCC-hHHHHHHHHHHHHHH
Q 007040 56 KIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTV-D-SAL---AADLGLRLIHVDTSR-AEEIADTVMALLLGL 129 (620)
Q Consensus 56 ~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~V-D-~~a---a~erGI~VtNtpg~~-a~aVAE~aLaLiLal 129 (620)
...++|+++++. ++++++++ |+||||++.|+|+|+| | +++ +.++||.|+|+++++ +.+||||+++++|++
T Consensus 38 ~~~~ad~~i~~~---~~~~~l~~-~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~ 113 (315)
T 3pp8_A 38 DNNPADYALVWQ---PPVEMLAG-RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHW 113 (315)
T ss_dssp CCSCCSEEEESS---CCHHHHTT-CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHH
T ss_pred CccCcEEEEECC---CCHHHhCC-CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHH
Confidence 456899999884 57999999 9999999999999999 7 887 678899999999874 899999999999999
Q ss_pred HhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceec
Q 007040 130 LRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRM 209 (620)
Q Consensus 130 ~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~ 209 (620)
.|++..+++. .+++.|... ..++++|++|||||+|.||+++|++|++|||+|++||+++..... .. .....
T Consensus 114 ~R~~~~~~~~-~~~g~W~~~------~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~-~~~~~ 184 (315)
T 3pp8_A 114 FRRFDDYQAL-KNQALWKPL------PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPG-VE-SYVGR 184 (315)
T ss_dssp HTTHHHHHHH-HHTTCCCCC------CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTT-CE-EEESH
T ss_pred HhCChHHHHH-HHhcccCCC------CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhh-hh-hhccc
Confidence 9999999887 578999753 236799999999999999999999999999999999998754321 11 11112
Q ss_pred CCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCC
Q 007040 210 DTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWME 288 (620)
Q Consensus 210 ~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~ 288 (620)
.+|++++++||+|++|||+|++|+++|+++.|+.||+|++|||+|||+++|++||+++|++|+|+||+||||++ |++.+
T Consensus 185 ~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~ 264 (315)
T 3pp8_A 185 EELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQE 264 (315)
T ss_dssp HHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTT
T ss_pred CCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999996 77889
Q ss_pred ccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCc
Q 007040 289 AWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAISDTEGC 342 (620)
Q Consensus 289 spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~~~y 342 (620)
+|||++|||++|||+|++|.+ .++.+.+++||.+|+ +|++|.|+||++.||
T Consensus 265 ~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~-~G~~~~~~V~~~~GY 315 (315)
T 3pp8_A 265 SPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLE-KGEPVTGQVDRARGY 315 (315)
T ss_dssp CGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHH-HTCCCCCBCCCC---
T ss_pred ChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHH-cCCCCCceECcccCC
Confidence 999999999999999999986 689999999999996 899999999999998
No 15
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=5.3e-58 Score=485.54 Aligned_cols=318 Identities=30% Similarity=0.486 Sum_probs=270.1
Q ss_pred CCCCCEEEEeCCCCCChhHHhhccCCceEEecCCCC---CcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccC
Q 007040 16 PTPLPSVVALNCIEDCVLEQDSLAGVALVEHVPLGR---LADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSD 92 (620)
Q Consensus 16 ~~~kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~---l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~ 92 (620)
++.+|+|++++.. ....+.+.++...++..++... +.+..+.++++++++....+++++++++|+||+|++.|+|+
T Consensus 18 ~~~kp~i~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 96 (347)
T 1mx3_A 18 GSHMPLVALLDGR-DCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGF 96 (347)
T ss_dssp ---CCEEEESSCS-CCTTTHHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSCCEEEESSSCC
T ss_pred CCCCCEEEEEcCC-cchhhHHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCCCEEEEccccc
Confidence 3569999999863 3344577888877777765322 22222467788888877789999999999999999999999
Q ss_pred CccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCC---CCCCcceeecCcEEEEEe
Q 007040 93 RTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQ---PLCRGMRRCRGLVLGIVG 169 (620)
Q Consensus 93 D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~---~~~~~~~~L~GktVGIIG 169 (620)
|+||+++|.++||.|+|+|++++++||||++++||+++|++..+++. .+++.|..... ....+..+++|++|||||
T Consensus 97 d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG 175 (347)
T 1mx3_A 97 DNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQA-LREGTRVQSVEQIREVASGAARIRGETLGIIG 175 (347)
T ss_dssp TTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHH-HHTTCCCCSHHHHHHHTTTCCCCTTCEEEEEC
T ss_pred CcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHH-HHcCCcccccccccccccCccCCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999887 58889953210 001123579999999999
Q ss_pred CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcE
Q 007040 170 RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAF 249 (620)
Q Consensus 170 lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAi 249 (620)
+|+||+.+|++|++|||+|++||++..... ....++....++++++++||+|++|||++++|+++|+++.|+.||+|++
T Consensus 176 ~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gai 254 (347)
T 1mx3_A 176 LGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 254 (347)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEE
T ss_pred ECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCE
Confidence 999999999999999999999999865422 2223445556899999999999999999999999999999999999999
Q ss_pred EEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCC-C-CCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 007040 250 LVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ-W-MEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFF 327 (620)
Q Consensus 250 LINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~-~-~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~ 327 (620)
|||+|||+++|+++|+++|++|+|+||+||||+.+| + .++|||.+|||++|||+|++|+++..++.+.+++||.+|+
T Consensus 255 lIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~- 333 (347)
T 1mx3_A 255 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAI- 333 (347)
T ss_dssp EEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHH-
T ss_pred EEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999744 4 3689999999999999999999999999999999999997
Q ss_pred cCCCCC---cccc
Q 007040 328 DGVIPK---NAIS 337 (620)
Q Consensus 328 ~G~~p~---nvVn 337 (620)
+|++|. |+||
T Consensus 334 ~g~~~~~l~~~v~ 346 (347)
T 1mx3_A 334 TGRIPDSLKNCVN 346 (347)
T ss_dssp HSCTTTTCSSBCC
T ss_pred cCCCCcccCCCCC
Confidence 777665 6775
No 16
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2.1e-58 Score=491.35 Aligned_cols=322 Identities=18% Similarity=0.261 Sum_probs=269.6
Q ss_pred CCCEEEEeCCCCCChhHHhhccCC-ceEEecCCCC----CcccccccceEEEEecC--CCCCHHHHhcCCCCeEEEEecc
Q 007040 18 PLPSVVALNCIEDCVLEQDSLAGV-ALVEHVPLGR----LADGKIEAAAAVLLHSL--AYLPRAAQRRLRPYQLILCLGS 90 (620)
Q Consensus 18 ~kPkVvvL~~~ed~~~~~~~L~~l-~~v~~~~~~~----l~e~~l~~AdaVlv~s~--~~l~~e~l~~lp~LK~I~~~ga 90 (620)
.+|+|+..+. ......+.|+.. .++..++... ...+.+.++|++++... ..+++++++++|+||||++.|+
T Consensus 16 ~~~~vl~~d~--~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~ 93 (364)
T 2j6i_A 16 DEEKLYGCTE--NKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGV 93 (364)
T ss_dssp HCTTCTTBTT--TGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSS
T ss_pred cCceEEEecC--ccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCc
Confidence 4566555543 222223344432 3555544221 12245788999888643 3589999999999999999999
Q ss_pred cCCccchHHHHhc--CcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEE
Q 007040 91 SDRTVDSALAADL--GLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIV 168 (620)
Q Consensus 91 G~D~VD~~aa~er--GI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGII 168 (620)
|+|+||+++|.++ ||.|+|+|++++.+||||++++||++.|+++.+++. .+++.|.... ......+|+|++||||
T Consensus 94 G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~W~~~~--~~~~~~~l~g~tvgII 170 (364)
T 2j6i_A 94 GSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQ-IINHDWEVAA--IAKDAYDIEGKTIATI 170 (364)
T ss_dssp CCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCHHH--HHTTCCCSTTCEEEEE
T ss_pred ccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHH-HHhCCCCcCc--ccCCcccCCCCEEEEE
Confidence 9999999999999 999999999999999999999999999999999887 5889996311 0012357999999999
Q ss_pred eCChhhHHHHHHHhhCCCE-EEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCC
Q 007040 169 GRSASARALATRSLSFKMS-VLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPG 247 (620)
Q Consensus 169 GlG~IG~~vA~~LkafG~~-V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~g 247 (620)
|+|+||+.+|++|++|||+ |++||++..........++....++++++++||+|++|+|++++|+++|+++.|+.||+|
T Consensus 171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~g 250 (364)
T 2j6i_A 171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKG 250 (364)
T ss_dssp CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTT
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCC
Confidence 9999999999999999997 999998774433222345555568999999999999999999999999999999999999
Q ss_pred cEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCC--C---cEEEcCCCCCCcHHHHHHHHHHHHHH
Q 007040 248 AFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREM--P---NVLILPRSADYSEEVWMEIRDKAISV 321 (620)
Q Consensus 248 AiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~--p---NVIlTPHiAg~T~ea~~~~~~~a~en 321 (620)
++|||+|||+++|+++|+++|++|+|+||+||||++ |++.++|||.+ | ||++|||+|++|.++..++...+++|
T Consensus 251 a~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~n 330 (364)
T 2j6i_A 251 AWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNI 330 (364)
T ss_dssp EEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHH
T ss_pred CEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997 66789999999 9 99999999999999999999999999
Q ss_pred HHHHHHcCC---CCCccccCCCCccCC
Q 007040 322 LQTFFFDGV---IPKNAISDTEGCENE 345 (620)
Q Consensus 322 L~~~L~~G~---~p~nvVn~~~~y~~~ 345 (620)
|.+|+ +|+ .|.|+|+...+|.+-
T Consensus 331 l~~~~-~g~~~~~~~n~v~~~~~y~~~ 356 (364)
T 2j6i_A 331 LESFF-TGKFDYRPQDIILLNGEYGTK 356 (364)
T ss_dssp HHHHH-TTCCCCCGGGEEEBTTBC---
T ss_pred HHHHH-cCCCCCCCCceecCCcCcchh
Confidence 99997 787 689999999999774
No 17
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.8e-57 Score=478.48 Aligned_cols=275 Identities=21% Similarity=0.265 Sum_probs=247.0
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCC--CeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhc
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRP--YQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRR 132 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~--LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rr 132 (620)
+.++++|+++++....+++++++++|+ ||||++.|+|+|+||+++|.++||.|+|+||+++++||||+++++|++.|+
T Consensus 42 ~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~ 121 (333)
T 1j4a_A 42 ALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQ 121 (333)
T ss_dssp GGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcC
Confidence 457899999998767899999999988 999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCH
Q 007040 133 THLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTL 212 (620)
Q Consensus 133 l~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL 212 (620)
++.+++. .+++.|.... ....++.|++|||||+|.||+.+|++|++|||+|++||++..... ...+....++
T Consensus 122 ~~~~~~~-~~~g~w~~~~----~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~~~~~l 193 (333)
T 1j4a_A 122 DKAMDEK-VARHDLRWAP----TIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPEL---EKKGYYVDSL 193 (333)
T ss_dssp HHHHHHH-HHTTBCCCTT----CCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHTTCBCSCH
T ss_pred HHHHHHH-HHcCCCccCC----cccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhH---HhhCeecCCH
Confidence 9999887 5788885321 123679999999999999999999999999999999999874321 1112333489
Q ss_pred HhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCC---CCC-
Q 007040 213 NDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ---WME- 288 (620)
Q Consensus 213 ~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~---~~~- 288 (620)
++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| +.+
T Consensus 194 ~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~ 273 (333)
T 1j4a_A 194 DDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDW 273 (333)
T ss_dssp HHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBC
T ss_pred HHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999744 333
Q ss_pred ------c----cccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccccC
Q 007040 289 ------A----WVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAISD 338 (620)
Q Consensus 289 ------s----pL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~ 338 (620)
+ |||++|||++|||+|++|.++..++.+.+++||.+|+ +|++|.|+||.
T Consensus 274 ~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~-~g~~~~~~v~~ 332 (333)
T 1j4a_A 274 EGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELV-EGKEAETPVKV 332 (333)
T ss_dssp TTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHH-TTCCCSSBCCC
T ss_pred ccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHH-cCCCCCccccC
Confidence 2 6999999999999999999999999999999999996 88889999975
No 18
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2.2e-57 Score=477.97 Aligned_cols=275 Identities=21% Similarity=0.270 Sum_probs=247.5
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCC--CeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhc
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRP--YQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRR 132 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~--LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rr 132 (620)
+.++++|++++++..++++++++++|+ ||||++.|+|+|+||+++|.++||.|+|+|++++.+||||++++||++.|+
T Consensus 40 ~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~ 119 (333)
T 1dxy_A 40 EWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRN 119 (333)
T ss_dssp GGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhh
Confidence 457899999998777899999999988 999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCC-CCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCC
Q 007040 133 THLLARHALSASGWLG-SVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDT 211 (620)
Q Consensus 133 l~~~~~~~~~~g~W~~-~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~s 211 (620)
++.+++. .+++.|.. .. ....++.|++|||||+|.||+.+|++|++|||+|++||++..... .... ...+
T Consensus 120 ~~~~~~~-~~~g~w~~~~~----~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~-~~~~ 190 (333)
T 1dxy_A 120 MGKVQAQ-LQAGDYEKAGT----FIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDF-DYVS 190 (333)
T ss_dssp HHHHHHH-HHTTCHHHHTC----CCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTC-EECC
T ss_pred HHHHHHH-HHcCCcccccC----CCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchhh---Hhcc-ccCC
Confidence 9999887 57888842 11 123579999999999999999999999999999999999875431 1122 3458
Q ss_pred HHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCC------
Q 007040 212 LNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ------ 285 (620)
Q Consensus 212 L~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~------ 285 (620)
+++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||
T Consensus 191 l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~ 270 (333)
T 1dxy_A 191 LEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNL 270 (333)
T ss_dssp HHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHH
T ss_pred HHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999744
Q ss_pred -----CCC---ccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccccCC
Q 007040 286 -----WME---AWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAISDT 339 (620)
Q Consensus 286 -----~~~---spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~ 339 (620)
..+ +|||++|||++|||+|++|.++..++.+.+++||.+|+ +|++|.|+||..
T Consensus 271 ~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~-~g~~~~~~v~~~ 331 (333)
T 1dxy_A 271 AKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFL-TKGETSTEVTGP 331 (333)
T ss_dssp HHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHH-HHSCCTTEECC-
T ss_pred ccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHH-cCCCCCceeCCC
Confidence 122 58999999999999999999999999999999999997 788899999864
No 19
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-57 Score=478.16 Aligned_cols=307 Identities=17% Similarity=0.197 Sum_probs=256.8
Q ss_pred CCCEEEEeCCCCCChhHHhhccCC-ceEEecCCCC--CcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCc
Q 007040 18 PLPSVVALNCIEDCVLEQDSLAGV-ALVEHVPLGR--LADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRT 94 (620)
Q Consensus 18 ~kPkVvvL~~~ed~~~~~~~L~~l-~~v~~~~~~~--l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~ 94 (620)
.+++|++..... +...+.|+.. .++...+... ...+.++++|++++++...+++++++++|+||||++.|+|+|+
T Consensus 25 ~~~~vli~~~~~--~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 102 (335)
T 2g76_A 25 NLRKVLISDSLD--PCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDN 102 (335)
T ss_dssp -CCEEEECSCCC--HHHHHHHHHHTCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSSSCTT
T ss_pred cceEEEEcCCCC--HHHHHHHHhCCCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCCCcch
Confidence 346777766532 2233444433 3444432111 1124568899999987778999999999999999999999999
Q ss_pred cchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhh
Q 007040 95 VDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASA 174 (620)
Q Consensus 95 VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG 174 (620)
||+++|.++||.|+|+|++++.+||||+++++|++.|+++.+++. .+++.|.... ....++.|++|||||+|.||
T Consensus 103 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~W~~~~----~~~~~l~g~tvgIIGlG~IG 177 (335)
T 2g76_A 103 VDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATAS-MKDGKWERKK----FMGTELNGKTLGILGLGRIG 177 (335)
T ss_dssp BCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHH-HHTTCCCTGG----GCBCCCTTCEEEEECCSHHH
T ss_pred hChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHH-HHcCCCCccC----CCCcCCCcCEEEEEeECHHH
Confidence 999999999999999999999999999999999999999999887 5889996421 12357999999999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 175 RALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 175 ~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+.+|++|++|||+|++||++.... .....++.. .++++++++||+|++|||++++|+++|+++.|+.||+|++|||+|
T Consensus 178 ~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 255 (335)
T 2g76_A 178 REVATRMQSFGMKTIGYDPIISPE-VSASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCA 255 (335)
T ss_dssp HHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECS
T ss_pred HHHHHHHHHCCCEEEEECCCcchh-hhhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 999999999999999999986432 122234433 589999999999999999999999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 007040 255 SSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKN 334 (620)
Q Consensus 255 RG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~n 334 (620)
||+++|+++|+++|++|+|+||+||||+.+|+.++|||++||||+|||+|++|.++..++.+.+++||.+|+ +|++|.|
T Consensus 256 rg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~-~g~~~~n 334 (335)
T 2g76_A 256 RGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMV-KGKSLTG 334 (335)
T ss_dssp CTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC--------
T ss_pred CccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCC
Confidence 999999999999999999999999999986678899999999999999999999999999999999999996 7887765
No 20
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=3.7e-57 Score=486.07 Aligned_cols=279 Identities=24% Similarity=0.274 Sum_probs=250.1
Q ss_pred cccccceEEEEec--CCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhc
Q 007040 55 GKIEAAAAVLLHS--LAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRR 132 (620)
Q Consensus 55 ~~l~~AdaVlv~s--~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rr 132 (620)
+.+.++|++++.. ...+++++++++|+||||++.|+|+|+||+++|.++||.|+|+|++++.+||||++++||++.|+
T Consensus 85 ~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~ 164 (393)
T 2nac_A 85 RELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRN 164 (393)
T ss_dssp HHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTT
T ss_pred HhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhc
Confidence 4678999988763 34789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCH
Q 007040 133 THLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTL 212 (620)
Q Consensus 133 l~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL 212 (620)
+..+++. .+++.|..... .....+|.|++|||||+|+||+.+|++|++|||+|++||++..........++....++
T Consensus 165 ~~~~~~~-~~~g~W~~~~~--~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l 241 (393)
T 2nac_A 165 YLPSHEW-ARKGGWNIADC--VSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATR 241 (393)
T ss_dssp HHHHHHH-HHTTCCCHHHH--HTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSH
T ss_pred cHHHHHH-HHcCCCCcccc--ccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCH
Confidence 9988886 57899963110 01235799999999999999999999999999999999998644332222345555689
Q ss_pred HhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccc
Q 007040 213 NDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWV 291 (620)
Q Consensus 213 ~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL 291 (620)
++++++||+|++|||++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++ |++.++||
T Consensus 242 ~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL 321 (393)
T 2nac_A 242 EDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPW 321 (393)
T ss_dssp HHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGG
T ss_pred HHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986 66789999
Q ss_pred cCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007040 292 REMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAIS 337 (620)
Q Consensus 292 ~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn 337 (620)
|++||||+|||+|++|.++..++...+++||.+|+ .|+++.|.|+
T Consensus 322 ~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~-~G~~~~~~~~ 366 (393)
T 2nac_A 322 RTMPYNGMTPHISGTTLTAQARYAAGTREILECFF-EGRPIRDEYL 366 (393)
T ss_dssp GTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHH-HTCCCCGGGE
T ss_pred HcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHH-cCCCCcceeE
Confidence 99999999999999999999999999999999997 7888888765
No 21
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=6.6e-57 Score=473.85 Aligned_cols=274 Identities=23% Similarity=0.289 Sum_probs=246.2
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCC--CeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhc
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRP--YQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRR 132 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~--LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rr 132 (620)
+.++++|+++++....+++++++++|+ ||+|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|+
T Consensus 41 ~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~ 120 (331)
T 1xdw_A 41 EMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRH 120 (331)
T ss_dssp HTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhC
Confidence 457899999998777899999999998 999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCH
Q 007040 133 THLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTL 212 (620)
Q Consensus 133 l~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL 212 (620)
++.+++. .+++.|.... . ....++.|++|||||+|.||+.+|++|++|||+|++||++..... ... ....++
T Consensus 121 ~~~~~~~-~~~g~w~~~~-~--~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~-~~~~~l 192 (331)
T 1xdw_A 121 TAYTTSR-TAKKNFKVDA-F--MFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGI---EDY-CTQVSL 192 (331)
T ss_dssp HHHHHHH-HTTTCCCCCS-T--TCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSC---TTT-CEECCH
T ss_pred HHHHHHH-HHcCCCcccc-C--cCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHH---Hhc-cccCCH
Confidence 9999887 5788885211 1 123579999999999999999999999999999999999875431 112 234589
Q ss_pred HhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCC---CC--
Q 007040 213 NDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ---WM-- 287 (620)
Q Consensus 213 ~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~---~~-- 287 (620)
++++++||+|++|||++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| +.
T Consensus 193 ~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~ 272 (331)
T 1xdw_A 193 DEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDL 272 (331)
T ss_dssp HHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCC
T ss_pred HHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999743 22
Q ss_pred -----C----ccccCC-CcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007040 288 -----E----AWVREM-PNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAIS 337 (620)
Q Consensus 288 -----~----spL~~~-pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn 337 (620)
+ +|||++ |||++|||+|++|.++..++.+.+++||.+|+ +|++|.|+||
T Consensus 273 ~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~-~g~~~~~~v~ 331 (331)
T 1xdw_A 273 EGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLA-ETGDCPNKIK 331 (331)
T ss_dssp TTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHH-HHSCCTTBCC
T ss_pred cccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHH-cCCCCCCCCC
Confidence 2 379999 99999999999999999999999999999997 7888889886
No 22
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=6.2e-56 Score=467.32 Aligned_cols=310 Identities=20% Similarity=0.261 Sum_probs=266.6
Q ss_pred CCCCCEEEEeCCCCCChhHHhhccCCceEEecCCC-CC---cccccccceEEEEecCCCCCHHHHhcCCCCeEEEEeccc
Q 007040 16 PTPLPSVVALNCIEDCVLEQDSLAGVALVEHVPLG-RL---ADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSS 91 (620)
Q Consensus 16 ~~~kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~-~l---~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG 91 (620)
.|.+|+|++..... +...+.|+...++..+... .. ..+.++++|++++++...+++++++++|+||||++.|+|
T Consensus 20 ~m~~~~vl~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~~~G 97 (333)
T 3ba1_A 20 HMEAIGVLMMCPMS--TYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVG 97 (333)
T ss_dssp --CCCEEEECSCCC--HHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEEESSSC
T ss_pred cCCCCEEEEeCCCC--HHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEEEcCcc
Confidence 35568888876532 3334455554555544321 11 123467899999877678999999999999999999999
Q ss_pred CCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCC
Q 007040 92 DRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRS 171 (620)
Q Consensus 92 ~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG 171 (620)
+|+||+++|.++||.|+|+||+++.+||||++++||+++|++..+++. .+++.|..... ....+++|++|||||+|
T Consensus 98 ~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~w~~~~~---~~~~~l~g~~vgIIG~G 173 (333)
T 3ba1_A 98 LDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKY-VRRGAWKFGDF---KLTTKFSGKRVGIIGLG 173 (333)
T ss_dssp CTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTGGGGCCC---CCCCCCTTCCEEEECCS
T ss_pred ccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHH-HHcCCCCcccc---ccccccCCCEEEEECCC
Confidence 999999999999999999999999999999999999999999999887 58899963211 12357999999999999
Q ss_pred hhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEE
Q 007040 172 ASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLV 251 (620)
Q Consensus 172 ~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLI 251 (620)
.||+.+|++|++|||+|++||++..... +.....++++++++||+|++|+|++++|+++|+++.|+.||+|++||
T Consensus 174 ~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailI 248 (333)
T 3ba1_A 174 RIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLI 248 (333)
T ss_dssp HHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEE
Confidence 9999999999999999999999875422 34445789999999999999999999999999999999999999999
Q ss_pred EcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCC
Q 007040 252 NTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVI 331 (620)
Q Consensus 252 NvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~ 331 (620)
|++||.++|+++|+++|++|+++||+||||+++|.+.+|||++||||+|||+|++|.++..++.+.+++||.+|+ +|++
T Consensus 249 n~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~-~g~~ 327 (333)
T 3ba1_A 249 NIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHF-SGKP 327 (333)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHH-HTCC
T ss_pred ECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 999999999999999999999999999999975555599999999999999999999999999999999999997 7888
Q ss_pred CCcccc
Q 007040 332 PKNAIS 337 (620)
Q Consensus 332 p~nvVn 337 (620)
|.|.||
T Consensus 328 ~~~~Vn 333 (333)
T 3ba1_A 328 LLTPVV 333 (333)
T ss_dssp CSSBCC
T ss_pred CCCCCC
Confidence 999886
No 23
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=8e-56 Score=462.15 Aligned_cols=304 Identities=27% Similarity=0.314 Sum_probs=260.5
Q ss_pred CEEEEeCCCCCChhHHhhccCC-ceEEecCCCCCc----ccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCc
Q 007040 20 PSVVALNCIEDCVLEQDSLAGV-ALVEHVPLGRLA----DGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRT 94 (620)
Q Consensus 20 PkVvvL~~~ed~~~~~~~L~~l-~~v~~~~~~~l~----e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~ 94 (620)
|+|++.....+. ..+.|+.. .++........+ .+.++++|+++++....+++++++++|+||||++.|+|+|+
T Consensus 1 ~~vl~~~~~~~~--~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 78 (311)
T 2cuk_A 1 MRVLVTRTLPGK--ALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDH 78 (311)
T ss_dssp CEEEESSCCSSS--TTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCCTT
T ss_pred CEEEEeCCCCHH--HHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCccc
Confidence 456665544332 22334443 465544322222 24578899999887668999999999999999999999999
Q ss_pred cchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhh
Q 007040 95 VDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASA 174 (620)
Q Consensus 95 VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG 174 (620)
||+++|.++||.|+|+||+++.+||||++++||+++|+++.+++. .+++.|.... +......++.|++|||||+|.||
T Consensus 79 id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~w~~~~-~~~~~~~~l~g~~vgIIG~G~IG 156 (311)
T 2cuk_A 79 VDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAY-ARDGLWKAWH-PELLLGLDLQGLTLGLVGMGRIG 156 (311)
T ss_dssp BCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCCCC-TTTTCBCCCTTCEEEEECCSHHH
T ss_pred cCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHH-HHcCCCCccc-cccccCcCCCCCEEEEEEECHHH
Confidence 999999999999999999999999999999999999999999887 5889996311 11112357999999999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 175 RALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 175 ~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+.+|++|++|||+|++||++..... + ...++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|
T Consensus 157 ~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~s 229 (311)
T 2cuk_A 157 QAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTA 229 (311)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred HHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECC
Confidence 9999999999999999999875432 1 24689999999999999999999999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007040 255 SSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPK 333 (620)
Q Consensus 255 RG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~ 333 (620)
||.++|+++|.++|+ |+|+||+||||++ |++.++|||++||||+|||+|++|.++..++.+.+++||.+|+ +|++|.
T Consensus 230 rg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~-~g~~~~ 307 (311)
T 2cuk_A 230 RGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVL-EGREPP 307 (311)
T ss_dssp CGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH-TTCCCS
T ss_pred CCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCC
Confidence 999999999999999 9999999999996 6588999999999999999999999999999999999999997 888888
Q ss_pred ccc
Q 007040 334 NAI 336 (620)
Q Consensus 334 nvV 336 (620)
|+|
T Consensus 308 ~~v 310 (311)
T 2cuk_A 308 NPV 310 (311)
T ss_dssp SBC
T ss_pred Ccc
Confidence 776
No 24
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.6e-55 Score=461.32 Aligned_cols=308 Identities=21% Similarity=0.221 Sum_probs=262.1
Q ss_pred CEEEEeCCCCCChhHHhhccCCceEEecCCCC-Cc----ccccccceEEEEecCCCCCHHHHhcCCC-CeEEEEecccCC
Q 007040 20 PSVVALNCIEDCVLEQDSLAGVALVEHVPLGR-LA----DGKIEAAAAVLLHSLAYLPRAAQRRLRP-YQLILCLGSSDR 93 (620)
Q Consensus 20 PkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~-l~----e~~l~~AdaVlv~s~~~l~~e~l~~lp~-LK~I~~~gaG~D 93 (620)
++|++.... .....+.|+...++....... .+ .+.++++|+++++....+++++++++|+ ||||++.|+|+|
T Consensus 2 ~~vl~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d 79 (320)
T 1gdh_A 2 KKILITWPL--PEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFD 79 (320)
T ss_dssp CEEEESSCC--CHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCT
T ss_pred cEEEEcCCC--CHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCcccc
Confidence 466666543 233355566655665543221 22 2457889999988766899999999999 999999999999
Q ss_pred ccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChh
Q 007040 94 TVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSAS 173 (620)
Q Consensus 94 ~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~I 173 (620)
+||+++|.++||.|+|+||+++.+||||++++||++.|+++.+++. .+++.|.... +......++.|++|||||+|.|
T Consensus 80 ~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~-~~~g~w~~~~-~~~~~~~~l~g~~vgIIG~G~I 157 (320)
T 1gdh_A 80 HIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKM-IRTRSWPGWE-PLELVGEKLDNKTLGIYGFGSI 157 (320)
T ss_dssp TBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCCCC-TTTTCBCCCTTCEEEEECCSHH
T ss_pred cccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHH-HHcCCCCccc-cccccCcCCCCCEEEEECcCHH
Confidence 9999999999999999999999999999999999999999999887 5889996321 1112235899999999999999
Q ss_pred hHHHHHHHhhCCCEEEEECC-CCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEE
Q 007040 174 ARALATRSLSFKMSVLYFDV-PEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 174 G~~vA~~LkafG~~V~~~dr-~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLIN 252 (620)
|+.+|++|++|||+|++||+ +.... .....++....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||
T Consensus 158 G~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn 236 (320)
T 1gdh_A 158 GQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVN 236 (320)
T ss_dssp HHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEE
Confidence 99999999999999999999 76432 12223444445899999999999999999999999999999999999999999
Q ss_pred cCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCC
Q 007040 253 TGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIP 332 (620)
Q Consensus 253 vgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p 332 (620)
+|||+++|+++|.++|++|+|+||+||||+.+|+.++|||++||||+|||++++|.++..++.+.+ +||.+|+ +|++|
T Consensus 237 ~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~-~g~~~ 314 (320)
T 1gdh_A 237 TARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDAL-FGGAD 314 (320)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHH-HTTSC
T ss_pred CCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHH-cCCCC
Confidence 999999999999999999999999999999755889999999999999999999999999999999 9999997 77765
Q ss_pred Cc
Q 007040 333 KN 334 (620)
Q Consensus 333 ~n 334 (620)
..
T Consensus 315 ~~ 316 (320)
T 1gdh_A 315 MS 316 (320)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 25
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.4e-56 Score=460.68 Aligned_cols=301 Identities=19% Similarity=0.249 Sum_probs=255.3
Q ss_pred CCEEEEeCCCCCChhHHhhccCC-ceEEecCCCC--CcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCcc
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGV-ALVEHVPLGR--LADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTV 95 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l-~~v~~~~~~~--l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~V 95 (620)
+++|++..... ....+.|+.. .++......+ ...+.++++|+++++....+++++++++|+||||++.|+|+|+|
T Consensus 3 ~~~il~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 80 (307)
T 1wwk_A 3 RMKVLVAAPLH--EKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNI 80 (307)
T ss_dssp -CEEEECSCCC--HHHHHHHHHTTCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCCTTB
T ss_pred ceEEEEeCCCC--HHHHHHHHhCCeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECCcccccc
Confidence 45777776532 2223344432 2343321111 11245788999998876679999999999999999999999999
Q ss_pred chHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhH
Q 007040 96 DSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASAR 175 (620)
Q Consensus 96 D~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~ 175 (620)
|+++|.++||.|+|+||+++.+||||+++++|+++|+++.+++. .+++.|.... ....++.|++|||||+|.||+
T Consensus 81 d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~w~~~~----~~~~~l~g~~vgIiG~G~IG~ 155 (307)
T 1wwk_A 81 DVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRK-MREGVWAKKE----AMGIELEGKTIGIIGFGRIGY 155 (307)
T ss_dssp CHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHH-HTTTCCCTTT----CCBCCCTTCEEEEECCSHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHH-HHcCCCCccC----cCCcccCCceEEEEccCHHHH
Confidence 99999999999999999999999999999999999999999887 5889996421 123689999999999999999
Q ss_pred HHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 176 ALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 176 ~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
.+|++|++|||+|++||++... ......++.. .++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+||
T Consensus 156 ~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 156 QVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp HHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 9999999999999999998754 2122234433 4899999999999999999999999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcC
Q 007040 256 SQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDG 329 (620)
Q Consensus 256 G~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G 329 (620)
|+++|+++|+++|++|+|+||+||||++ |++.++|||++||||+|||+|++|.++..++.+.+++||.+|+ +|
T Consensus 234 g~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~-~g 307 (307)
T 1wwk_A 234 GPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKIL-KG 307 (307)
T ss_dssp GGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHH-TC
T ss_pred CcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHH-cC
Confidence 9999999999999999999999999996 6668999999999999999999999999999999999999997 54
No 26
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=8.6e-56 Score=468.28 Aligned_cols=321 Identities=18% Similarity=0.218 Sum_probs=266.7
Q ss_pred CCCEEEEeCC-CCCChhHHhhccCCceEEecCCCCCc--ccccc-----cceEEEEe------cCCCCCHHHHhcCC-CC
Q 007040 18 PLPSVVALNC-IEDCVLEQDSLAGVALVEHVPLGRLA--DGKIE-----AAAAVLLH------SLAYLPRAAQRRLR-PY 82 (620)
Q Consensus 18 ~kPkVvvL~~-~ed~~~~~~~L~~l~~v~~~~~~~l~--e~~l~-----~AdaVlv~------s~~~l~~e~l~~lp-~L 82 (620)
++|+|+++.. ........+.|+...++..++..+.. .+.+. ++|+++.. ....+++++++++| +|
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~L 81 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSL 81 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTC
T ss_pred CCcEEEEECCccccChHHHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCc
Confidence 4678888876 43233344555554566554321111 12333 77887764 24579999999998 59
Q ss_pred eEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCC---CCCCCCCCCCccee
Q 007040 83 QLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASG---WLGSVQPLCRGMRR 159 (620)
Q Consensus 83 K~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~---W~~~~~~~~~~~~~ 159 (620)
|||++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++. .+++. |............+
T Consensus 82 k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~-~~~g~~~~w~~~~~~~~~~~~~ 160 (348)
T 2w2k_A 82 KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERA-ARTGDPETFNRVHLEIGKSAHN 160 (348)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHH-HTTCCHHHHHHHHHHHHTTCCC
T ss_pred eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHH-HHcCCCcccccccccccccCcC
Confidence 999999999999999999999999999999999999999999999999999999887 57888 93210000011357
Q ss_pred ecCcEEEEEeCChhhHHHHHHHh-hCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 160 CRGLVLGIVGRSASARALATRSL-SFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~Lk-afG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++|++|||||+|.||+.+|++|+ +|||+|++||++..........++....++++++++||+|++|+|++++|+++|++
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~ 240 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDE 240 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCH
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhH
Confidence 99999999999999999999999 99999999999875433222224444458999999999999999999999999999
Q ss_pred HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHH
Q 007040 239 ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKA 318 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a 318 (620)
+.++.||+|++|||++||+++|+++|.++|++|+|.||++|||+++|..++||+++||||+|||+|++|.++..++.+.+
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~ 320 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEFERLT 320 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999866778899999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccCCC
Q 007040 319 ISVLQTFFFDGVIPKNAISDTE 340 (620)
Q Consensus 319 ~enL~~~L~~G~~p~nvVn~~~ 340 (620)
++||.+|+ +|+.|.|+||.+.
T Consensus 321 ~~ni~~~~-~g~~~~~~v~~~~ 341 (348)
T 2w2k_A 321 MTNIDRFL-LQGKPLLTPAGKV 341 (348)
T ss_dssp HHHHHHHH-HTCCCCSSBCSCC
T ss_pred HHHHHHHH-cCCCCcceecccc
Confidence 99999997 6777999998754
No 27
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.2e-55 Score=459.53 Aligned_cols=271 Identities=17% Similarity=0.191 Sum_probs=245.9
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccH
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTH 134 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~ 134 (620)
+.++++|+++++. .+.++++++|+||||++.|+|+|+||++++ ++||.|+|+||+++.+||||++++||+++|+++
T Consensus 27 ~~~~~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~ 102 (303)
T 1qp8_A 27 GDLGNVEAALVSR---ITAEELAKMPRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRII 102 (303)
T ss_dssp SCCTTBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHH
T ss_pred hhhCCCEEEEECC---CCHHHHhhCCCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHH
Confidence 4578899888764 467999999999999999999999999985 789999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHh
Q 007040 135 LLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLND 214 (620)
Q Consensus 135 ~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~e 214 (620)
.+++. .+++.|.... ...++.|++|||||+|.||+.+|++|++|||+|++||++.. .. +.....++++
T Consensus 103 ~~~~~-~~~g~w~~~~-----~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~-----~~~~~~~l~e 170 (303)
T 1qp8_A 103 QYGEK-MKRGDYGRDV-----EIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG-----PWRFTNSLEE 170 (303)
T ss_dssp HHHHH-HHTTCCCCCS-----CCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS-----SSCCBSCSHH
T ss_pred HHHHH-HHcCCCCCCC-----CCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc-----CcccCCCHHH
Confidence 99887 5889996431 22479999999999999999999999999999999999875 11 2334568999
Q ss_pred hhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecC-CC-CCCCCcccc
Q 007040 215 LLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGA-EG-PQWMEAWVR 292 (620)
Q Consensus 215 LL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~-E~-P~~~~spL~ 292 (620)
++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+|||| ++ |++.++|||
T Consensus 171 ll~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~ 250 (303)
T 1qp8_A 171 ALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFF 250 (303)
T ss_dssp HHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHH
T ss_pred HHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 64 666789999
Q ss_pred CCCcEEEcCCCCCC--cHHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCcc
Q 007040 293 EMPNVLILPRSADY--SEEVWMEIRDKAISVLQTFFFDGVIPKNAISDTEGCE 343 (620)
Q Consensus 293 ~~pNVIlTPHiAg~--T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~~~y~ 343 (620)
++||||+|||+|++ |.++..++.+.+++||.+|+ +|++|.|+||++ .|.
T Consensus 251 ~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~-~g~~~~~~v~~~-~y~ 301 (303)
T 1qp8_A 251 SLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYA-TGGRPRNIAKRE-DYI 301 (303)
T ss_dssp TSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHH-TTSCCSCBCCGG-GTC
T ss_pred cCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCceeCHH-HcC
Confidence 99999999999998 99999999999999999997 888899999977 464
No 28
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.1e-54 Score=457.20 Aligned_cols=315 Identities=22% Similarity=0.271 Sum_probs=267.9
Q ss_pred CCEEEEeCCCCCChhHHhhccCCceEEecCCC-CCc----ccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCC
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGVALVEHVPLG-RLA----DGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDR 93 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~-~l~----e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D 93 (620)
+++|++.... .....+.|....++..+... ..+ .+.+.++|+++++....+++++++++|+||||++.|+|+|
T Consensus 2 ~~~il~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 79 (334)
T 2dbq_A 2 KPKVFITREI--PEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYD 79 (334)
T ss_dssp CCEEEESSCC--CHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCT
T ss_pred CcEEEEecCC--CHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECCcccc
Confidence 4577776543 23334556655566554432 122 2356889999998767899999999999999999999999
Q ss_pred ccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCC---CCCCCCCcceeecCcEEEEEeC
Q 007040 94 TVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLG---SVQPLCRGMRRCRGLVLGIVGR 170 (620)
Q Consensus 94 ~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~---~~~~~~~~~~~L~GktVGIIGl 170 (620)
+||+++|.++||.|+|+||+++.+||||++++||+++|+++.+++. .+++.|.. ...+......++.|++|||||+
T Consensus 80 ~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~ 158 (334)
T 2dbq_A 80 NIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRF-VRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGL 158 (334)
T ss_dssp TBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHH-HHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECC
T ss_pred cccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHH-HHcCCCcccccccccccccccCCCCCEEEEEcc
Confidence 9999999999999999999999999999999999999999999887 57888951 1111111235799999999999
Q ss_pred ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEE
Q 007040 171 SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFL 250 (620)
Q Consensus 171 G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiL 250 (620)
|.||+.+|++|++||++|++||++... ......+.. ..++++++++||+|++|+|.+++|+++|+++.++.||+|++|
T Consensus 159 G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~-~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ail 236 (334)
T 2dbq_A 159 GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAE-FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAIL 236 (334)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEE
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcc-cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEE
Confidence 999999999999999999999998754 211122333 358999999999999999999999999999999999999999
Q ss_pred EEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 251 VNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 251 INvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
||+|||.++|+++|.++|++|+|+||++|||+++|+.++|||.+||||+|||+|++|.++..++.+.+++||.+|+ +|+
T Consensus 237 In~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~-~g~ 315 (334)
T 2dbq_A 237 INIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFK-RGE 315 (334)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred EECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHH-cCC
Confidence 9999999999999999999999999999999976678899999999999999999999999999999999999996 888
Q ss_pred CCCccccCC
Q 007040 331 IPKNAISDT 339 (620)
Q Consensus 331 ~p~nvVn~~ 339 (620)
+|.|+||++
T Consensus 316 ~~~~~v~~~ 324 (334)
T 2dbq_A 316 IPPTLVNRE 324 (334)
T ss_dssp CCTTBSCTT
T ss_pred CCccccCHH
Confidence 899999865
No 29
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=6.3e-55 Score=455.61 Aligned_cols=268 Identities=16% Similarity=0.185 Sum_probs=243.4
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccH
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTH 134 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~ 134 (620)
+.++++|+++++...++++++++++|+||||++.|+|+|+||+++|.++||.|+|+||+++.+||||++++||++.|+++
T Consensus 42 ~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~ 121 (313)
T 2ekl_A 42 NIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMY 121 (313)
T ss_dssp HHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHH
T ss_pred HHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHH
Confidence 45788999998766679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHh
Q 007040 135 LLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLND 214 (620)
Q Consensus 135 ~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~e 214 (620)
.+++. .+++.|.. ....++.|++|||||+|+||+.+|++|++|||+|++||++..... ....++.. .++++
T Consensus 122 ~~~~~-~~~g~w~~------~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~-~~l~e 192 (313)
T 2ekl_A 122 TSMAL-AKSGIFKK------IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AEKINAKA-VSLEE 192 (313)
T ss_dssp HHHHH-HHTTCCCC------CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHTTCEE-CCHHH
T ss_pred HHHHH-HHcCCCCC------CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HHhcCcee-cCHHH
Confidence 99887 58899962 123579999999999999999999999999999999999875421 22234443 48999
Q ss_pred hhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCc---cc
Q 007040 215 LLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEA---WV 291 (620)
Q Consensus 215 LL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~s---pL 291 (620)
++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||+++|.+++ ||
T Consensus 193 ll~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L 272 (313)
T 2ekl_A 193 LLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELEL 272 (313)
T ss_dssp HHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHH
T ss_pred HHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997554577 99
Q ss_pred cCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCC
Q 007040 292 REMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIP 332 (620)
Q Consensus 292 ~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p 332 (620)
|++||||+|||+|++|.++..++.+.+++||.+|+ +|+++
T Consensus 273 ~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~-~g~~l 312 (313)
T 2ekl_A 273 LKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAM-KELGM 312 (313)
T ss_dssp HHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred hhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHH-cCCCC
Confidence 99999999999999999999999999999999997 77754
No 30
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.9e-54 Score=452.37 Aligned_cols=312 Identities=22% Similarity=0.333 Sum_probs=266.3
Q ss_pred CCEEEEeCCCCCChhHHhhccCCceEEecCCCCCc----ccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCc
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGVALVEHVPLGRLA----DGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRT 94 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~l~----e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~ 94 (620)
+|+|++...+. ....+.|+...++...+ ... .+.++++|++++++...+++++++++|+||||++.|+|+|+
T Consensus 2 ~~~il~~~~~~--~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 77 (333)
T 2d0i_A 2 RPKVGVLLKMK--REALEELKKYADVEIIL--YPSGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDN 77 (333)
T ss_dssp CSEEEECSCCC--HHHHHHHHTTSEEEECC--SCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTT
T ss_pred CcEEEEECCCC--HHHHHHHHhcCCEEEeC--CCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCccccc
Confidence 57888876532 33345566655665543 122 24578899999887778999999999999999999999999
Q ss_pred cchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCC---cceeecCcEEEEEeCC
Q 007040 95 VDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCR---GMRRCRGLVLGIVGRS 171 (620)
Q Consensus 95 VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~---~~~~L~GktVGIIGlG 171 (620)
||+++|.++||.|+|+||+++.+||||+++++|+++|+++.+++. .+++.|.... .... ...++.|++|||||+|
T Consensus 78 id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~-~~~g~w~~~~-~~~~~~~~~~~l~g~~vgIIG~G 155 (333)
T 2d0i_A 78 IDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKF-IRRGEWESHA-KIWTGFKRIESLYGKKVGILGMG 155 (333)
T ss_dssp BCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH-HHTTCCCCHH-HHHTTSCCCCCSTTCEEEEECCS
T ss_pred ccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHH-HHcCCCCcCc-ccccCCcccCCCCcCEEEEEccC
Confidence 999999999999999999999999999999999999999999887 5889995310 0001 1157999999999999
Q ss_pred hhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEE
Q 007040 172 ASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLV 251 (620)
Q Consensus 172 ~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLI 251 (620)
.||+.+|++|++|||+|++||++... ......++.. .++++++++||+|++|+|.+++|+++|+++.++.||+| +||
T Consensus 156 ~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ili 232 (333)
T 2d0i_A 156 AIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLV 232 (333)
T ss_dssp HHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEE
Confidence 99999999999999999999998754 2112223433 48999999999999999999999999999999999999 999
Q ss_pred EcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCC-cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 252 NTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMP-NVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 252 NvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~p-NVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
|+|||.++|+++|.++|++|+|+||++|||+++|.+++|||++| |||+|||+|++|.++..++.+.+++||.+|+ +|+
T Consensus 233 n~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~-~g~ 311 (333)
T 2d0i_A 233 NIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVL-RGE 311 (333)
T ss_dssp ECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred ECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHH-cCC
Confidence 99999999999999999999999999999997443389999999 9999999999999999999999999999997 888
Q ss_pred CCCccccCCC
Q 007040 331 IPKNAISDTE 340 (620)
Q Consensus 331 ~p~nvVn~~~ 340 (620)
+|.|+||++.
T Consensus 312 ~~~~~v~~~~ 321 (333)
T 2d0i_A 312 VPEDLVNKEV 321 (333)
T ss_dssp CCTTBSCTTH
T ss_pred CCcCccCHHH
Confidence 8999998653
No 31
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=1.8e-53 Score=447.05 Aligned_cols=315 Identities=18% Similarity=0.182 Sum_probs=266.7
Q ss_pred CCCEEEEeCCCCCChhHHhhccCC--ceEEecCCC-CCc----ccccccceEEEEecCCCCCHHHHhcC-CCCeEEEEec
Q 007040 18 PLPSVVALNCIEDCVLEQDSLAGV--ALVEHVPLG-RLA----DGKIEAAAAVLLHSLAYLPRAAQRRL-RPYQLILCLG 89 (620)
Q Consensus 18 ~kPkVvvL~~~ed~~~~~~~L~~l--~~v~~~~~~-~l~----e~~l~~AdaVlv~s~~~l~~e~l~~l-p~LK~I~~~g 89 (620)
++++|++.... .....+.|+.. .++..++.. ..+ .+.++++|+++++....+++++++++ |+||||++.|
T Consensus 7 ~~~~il~~~~~--~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~ 84 (330)
T 2gcg_A 7 RLMKVFVTRRI--PAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMS 84 (330)
T ss_dssp CCEEEEESSCC--CHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESS
T ss_pred CCCEEEEECCC--CHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECC
Confidence 35677776543 22334445543 455544321 122 13467899999877668999999999 9999999999
Q ss_pred ccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEe
Q 007040 90 SSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVG 169 (620)
Q Consensus 90 aG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIG 169 (620)
+|+|+||+++|.++||.|+|+||+++.+||||+++++|+++|++..+++. .+++.|.... +......++.|++|||||
T Consensus 85 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~-~~~~~w~~~~-~~~~~~~~l~g~~vgIIG 162 (330)
T 2gcg_A 85 VGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEE-VKNGGWTSWK-PLWLCGYGLTQSTVGIIG 162 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCSCC-TTSSCBCCCTTCEEEEEC
T ss_pred cccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHH-HHcCCCcccC-cccccCcCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999887 5889996421 111223689999999999
Q ss_pred CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcE
Q 007040 170 RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAF 249 (620)
Q Consensus 170 lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAi 249 (620)
+|.||+.+|+.|++||++|++||++..........+.... ++++++++||+|++|+|.+++|+++|+++.++.||+|++
T Consensus 163 ~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gai 241 (330)
T 2gcg_A 163 LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAV 241 (330)
T ss_dssp CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCE
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcE
Confidence 9999999999999999999999987643322222344444 899999999999999999999999999999999999999
Q ss_pred EEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC-CCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHc
Q 007040 250 LVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG-PQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFD 328 (620)
Q Consensus 250 LINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~-P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~ 328 (620)
|||++||.++|+++|.++|++|+|.||+||||++ |++.++|||++||||+|||+|++|.++..++...+++||.+|+ +
T Consensus 242 lIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~-~ 320 (330)
T 2gcg_A 242 FINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGL-R 320 (330)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH-H
T ss_pred EEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHH-c
Confidence 9999999999999999999999999999999987 6688999999999999999999999999999999999999997 7
Q ss_pred CCCCCccccC
Q 007040 329 GVIPKNAISD 338 (620)
Q Consensus 329 G~~p~nvVn~ 338 (620)
|++|.|+||.
T Consensus 321 g~~~~~~v~~ 330 (330)
T 2gcg_A 321 GEPMPSELKL 330 (330)
T ss_dssp TCCCTTEECC
T ss_pred CCCCCCCCCC
Confidence 8889999974
No 32
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=7.8e-54 Score=458.14 Aligned_cols=276 Identities=20% Similarity=0.265 Sum_probs=243.8
Q ss_pred EEEEeCCCCCChhHHhhccCCceEEecCCCCCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHH
Q 007040 21 SVVALNCIEDCVLEQDSLAGVALVEHVPLGRLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALA 100 (620)
Q Consensus 21 kVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa 100 (620)
||++.+.. +...+.++.+.++..++...+..+.+.++|++++++.+++++++++ .++||||++.|+|+|+||+++|
T Consensus 5 kIl~~~~~---p~~~~~~~~~~~v~~~~~~~~~~~~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G~D~iD~~~~ 80 (381)
T 3oet_A 5 KILVDENM---PYARELFSRLGEVKAVPGRPIPVEELNHADALMVRSVTKVNESLLS-GTPINFVGTATAGTDHVDEAWL 80 (381)
T ss_dssp EEEEETTS---TTHHHHHTTSSEEEEECC---CHHHHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSCCTTBCHHHH
T ss_pred EEEECCCC---cHHHHHHhhCCcEEEeCCCCCCHHHHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEccccccccCHHHH
Confidence 67776543 3356778888888877766666677899999999988889999999 5679999999999999999999
Q ss_pred HhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHH
Q 007040 101 ADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATR 180 (620)
Q Consensus 101 ~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~ 180 (620)
.++||.|+|+||+++.+||||+++++|++.|+. ..+++|++|||||+|+||+++|++
T Consensus 81 ~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~-----------------------g~~l~gktvGIIGlG~IG~~vA~~ 137 (381)
T 3oet_A 81 KQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD-----------------------GFSLRDRTIGIVGVGNVGSRLQTR 137 (381)
T ss_dssp HHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT-----------------------TCCGGGCEEEEECCSHHHHHHHHH
T ss_pred HhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc-----------------------CCccCCCEEEEEeECHHHHHHHHH
Confidence 999999999999999999999999999999752 135899999999999999999999
Q ss_pred HhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChh----hHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 181 SLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDE----TIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 181 LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~----T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
|++|||+|++||++..... ......++++++++||+|++|+|+|++ |+++|+++.|+.||+|++|||+|||
T Consensus 138 l~a~G~~V~~~d~~~~~~~-----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG 212 (381)
T 3oet_A 138 LEALGIRTLLCDPPRAARG-----DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRG 212 (381)
T ss_dssp HHHTTCEEEEECHHHHHTT-----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCG
T ss_pred HHHCCCEEEEECCChHHhc-----cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCC
Confidence 9999999999998642211 122356899999999999999999999 9999999999999999999999999
Q ss_pred hhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 257 QLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 257 ~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
++||++||+++|++|+|.||+||||++||.++.+||.++ +|+|||+||+|.|+..++..++++||.+|| +|.
T Consensus 213 ~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l-~~~ 284 (381)
T 3oet_A 213 PVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFI-GRE 284 (381)
T ss_dssp GGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHH-cCC
Confidence 999999999999999999999999998666778899874 899999999999999999999999999996 554
No 33
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=5e-53 Score=437.72 Aligned_cols=253 Identities=18% Similarity=0.181 Sum_probs=226.4
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccH
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTH 134 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~ 134 (620)
+.++++|+++++. ..+ ++|+||||++.|+|+|+||+++|++++|.++| ++.++.+||||++++||++.|++.
T Consensus 30 ~~~~~ad~li~~~-~~~------~~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~ 101 (290)
T 3gvx_A 30 PDYYDAEAQVIKD-RYV------LGKRTKMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNIL 101 (290)
T ss_dssp TSCCCCSEEEESS-CCC------CCSSCCEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred cchhhhhhhhhhh-hhh------hhhhhHHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhh
Confidence 4678899998843 232 78999999999999999999999987665555 588999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHh
Q 007040 135 LLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLND 214 (620)
Q Consensus 135 ~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~e 214 (620)
.+++. .+++.|.... ..+++|++|||||+|.||+++|++|++|||+|++||++...... .....++++
T Consensus 102 ~~~~~-~~~g~w~~~~------~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~e 169 (290)
T 3gvx_A 102 ENNEL-MKAGIFRQSP------TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPAD 169 (290)
T ss_dssp HHHHH-HHTTCCCCCC------CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHH
T ss_pred hhhhH-hhhcccccCC------ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHH
Confidence 99987 5889997532 25799999999999999999999999999999999998754331 334569999
Q ss_pred hhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCC
Q 007040 215 LLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREM 294 (620)
Q Consensus 215 LL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~ 294 (620)
++++||+|++|+|+|++|+++|+.+.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+++|. +|||++
T Consensus 170 ll~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~--~pL~~~ 247 (290)
T 3gvx_A 170 LFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE--ITETNL 247 (290)
T ss_dssp HHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS--CCSCCC
T ss_pred HhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc--cchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998655 899999
Q ss_pred CcEEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 295 PNVLILPRSA-DYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 295 pNVIlTPHiA-g~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
||||+|||+| ++|.++.+++.+.+++||.+|+ +|+
T Consensus 248 ~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~-~~~ 283 (290)
T 3gvx_A 248 RNAILSPHVAGGMSGEIMDIAIQLAFENVRNFF-EGE 283 (290)
T ss_dssp SSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHT-C--
T ss_pred hhhhcCccccCCccchHHHHHHHHHHHHHHhhh-cCC
Confidence 9999999999 9999999999999999999996 665
No 34
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1e-51 Score=458.90 Aligned_cols=311 Identities=22% Similarity=0.259 Sum_probs=269.8
Q ss_pred CCEEEEeCCCCCChhHHhhccCCceEEecCCCCC--cccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccc
Q 007040 19 LPSVVALNCIEDCVLEQDSLAGVALVEHVPLGRL--ADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVD 96 (620)
Q Consensus 19 kPkVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~l--~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD 96 (620)
+++|++.+... +...+.|+...++...+.... ..+.+.++|++++++.+.+++++++++|+||||+++|+|+|+||
T Consensus 4 ~~~vl~~~~~~--~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 81 (529)
T 1ygy_A 4 LPVVLIADKLA--PSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVD 81 (529)
T ss_dssp CCEEEECSSCC--GGGGTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTTBC
T ss_pred CcEEEEeCCCC--HHHHHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCcCccC
Confidence 56788876542 223445665556665542111 12457899999998878899999999999999999999999999
Q ss_pred hHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHH
Q 007040 97 SALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARA 176 (620)
Q Consensus 97 ~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~ 176 (620)
+++|+++||.|+|+|++++.+||||++++||+++|+++.++.. .+++.|.... ....+++|++|||||+|.||++
T Consensus 82 ~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~-~~~g~w~~~~----~~~~~l~g~~vgIIG~G~IG~~ 156 (529)
T 1ygy_A 82 VDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADAS-LREHTWKRSS----FSGTEIFGKTVGVVGLGRIGQL 156 (529)
T ss_dssp HHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHH-HHTTCCCGGG----CCBCCCTTCEEEEECCSHHHHH
T ss_pred HhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHH-HHhCCCcccC----cCccccCCCEEEEEeeCHHHHH
Confidence 9999999999999999999999999999999999999999887 5899997431 1235799999999999999999
Q ss_pred HHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 177 LATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 177 vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
+|++|++|||+|++||++... ......|+... ++++++++||+|++|+|.+++|.++|+.+.++.||+|++|||+|||
T Consensus 157 vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg 234 (529)
T 1ygy_A 157 VAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARG 234 (529)
T ss_dssp HHHHHHTTTCEEEEECTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCT
T ss_pred HHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCC
Confidence 999999999999999998732 22223344444 8999999999999999999999999999999999999999999999
Q ss_pred hhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 007040 257 QLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAI 336 (620)
Q Consensus 257 ~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvV 336 (620)
.++|+.+|+++|++|+|+||++|||+.+|+.++|||++||||+|||+++.|.++.+++...+++||.+|+ .|.++.|+|
T Consensus 235 ~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l-~~~~~~~~v 313 (529)
T 1ygy_A 235 GLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLAL-AGEFVPDAV 313 (529)
T ss_dssp TSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHH-TTCCCTTBC
T ss_pred chhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCccc
Confidence 9999999999999999999999999986678999999999999999999999999999999999999996 888889999
Q ss_pred cCC
Q 007040 337 SDT 339 (620)
Q Consensus 337 n~~ 339 (620)
|..
T Consensus 314 ~~~ 316 (529)
T 1ygy_A 314 NVG 316 (529)
T ss_dssp SCC
T ss_pred CCc
Confidence 876
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-51 Score=441.86 Aligned_cols=276 Identities=21% Similarity=0.263 Sum_probs=242.1
Q ss_pred EEEEeCCCCCChhHHhhccCCceEEecCCCCCcccccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHH
Q 007040 21 SVVALNCIEDCVLEQDSLAGVALVEHVPLGRLADGKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALA 100 (620)
Q Consensus 21 kVvvL~~~ed~~~~~~~L~~l~~v~~~~~~~l~e~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa 100 (620)
+|++.+..+ ...+.++...++..++..++..+.++++|++++++.+.+++++++ +|+||||++.|+|+|+||+++|
T Consensus 2 kil~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~~~~ 77 (380)
T 2o4c_A 2 RILADENIP---VVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDLDYF 77 (380)
T ss_dssp EEEEETTCT---THHHHHGGGSEEEEECGGGCSTTTTTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCHHHH
T ss_pred EEEEecCch---HHHHHHHhCCcEEEecCCcCChHHHCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhHHHH
Confidence 566655432 234556666666665544455566889999999887789999999 9999999999999999999999
Q ss_pred HhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHH
Q 007040 101 ADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATR 180 (620)
Q Consensus 101 ~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~ 180 (620)
.++||.|+|+||+++.+||||++++||++.|++ . .++.|++|||||+|+||+.+|++
T Consensus 78 ~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~-------------~----------~~l~g~tvGIIGlG~IG~~vA~~ 134 (380)
T 2o4c_A 78 AEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR-------------G----------ADLAERTYGVVGAGQVGGRLVEV 134 (380)
T ss_dssp HHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH-------------T----------CCGGGCEEEEECCSHHHHHHHHH
T ss_pred HhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh-------------h----------cccCCCEEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999862 1 25899999999999999999999
Q ss_pred HhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChh----hHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 181 SLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDE----TIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 181 LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~----T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
|++|||+|++||++.... ..+. ...++++++++||+|++|+|++++ |+++|+++.|+.||+|++|||+|||
T Consensus 135 l~~~G~~V~~~d~~~~~~----~~g~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG 209 (380)
T 2o4c_A 135 LRGLGWKVLVCDPPRQAR----EPDG-EFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRG 209 (380)
T ss_dssp HHHTTCEEEEECHHHHHH----STTS-CCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCG
T ss_pred HHHCCCEEEEEcCChhhh----ccCc-ccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCC
Confidence 999999999999865321 1122 346899999999999999999999 9999999999999999999999999
Q ss_pred hhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCC
Q 007040 257 QLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGV 330 (620)
Q Consensus 257 ~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~ 330 (620)
+++|+++|+++|++|+|.||+||||++||.++++|+. +||++|||+||+|.++..++...+++||.+|+ +|.
T Consensus 210 ~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l-~g~ 281 (380)
T 2o4c_A 210 AVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWR-GIA 281 (380)
T ss_dssp GGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred cccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHH-cCC
Confidence 9999999999999999999999999986677888887 59999999999999999999999999999997 666
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.97 E-value=6.5e-33 Score=304.15 Aligned_cols=231 Identities=10% Similarity=0.013 Sum_probs=192.6
Q ss_pred CCCCeEEE-EecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcc
Q 007040 79 LRPYQLIL-CLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGM 157 (620)
Q Consensus 79 lp~LK~I~-~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~ 157 (620)
+++++.|+ .+++|+|++ .+|.++||.++|++++++ +||| +++|++...... ...+ |.+. ..
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~-l~~g-w~r~------~~ 252 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHS-LPDG-LMRA------TD 252 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHH-HHHH-HHHH------HC
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHH-Hhhh-hhhc------cc
Confidence 47888988 788999988 788999999999999999 9999 345776665554 3445 8531 12
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
.++.|++|||||+|.||+.+|++|++|||+|++||+++.........+.. ..++++++++||+|++|+ .|.++|+
T Consensus 253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~~l~ell~~aDiVi~~~----~t~~lI~ 327 (479)
T 1v8b_A 253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VVTLDEIVDKGDFFITCT----GNVDVIK 327 (479)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-ECCHHHHTTTCSEEEECC----SSSSSBC
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ecCHHHHHhcCCEEEECC----ChhhhcC
Confidence 46899999999999999999999999999999999987442222333443 458999999999999995 6889999
Q ss_pred HHHhhccCCCcEEEEcCCChh-hcHHHHHH--HHHcCCcceeEeecCCCCCCCCccccCC--CcEEEcCCCC-CCcHH-H
Q 007040 238 AECLQHIKPGAFLVNTGSSQL-LDDCAVKQ--LLIDGTLAGCALDGAEGPQWMEAWVREM--PNVLILPRSA-DYSEE-V 310 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~v-VDe~AL~~--AL~~G~I~GAaLDV~E~P~~~~spL~~~--pNVIlTPHiA-g~T~e-a 310 (620)
.+.|+.||+|++|||+|||.+ ||+++|.+ +|++|+|+ +++|||+ ++.++|||.+ |||++| |+| +.+.+ .
T Consensus 328 ~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~p--lp~~~~l~~l~~~nvv~t-H~atghp~e~~ 403 (479)
T 1v8b_A 328 LEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRIT--LPNGNKIIVLARGRLLNL-GCATGHPAFVM 403 (479)
T ss_dssp HHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEE--CTTSCEEEEEGGGSBHHH-HSSCCSCHHHH
T ss_pred HHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEE--CCCCCeeeEecCCCEEEE-eccCCCCchhH
Confidence 999999999999999999999 99999999 99999998 9999984 3457889888 999999 999 66655 6
Q ss_pred HHHHHHHHHHHHHHHHHcCC--CCCcccc
Q 007040 311 WMEIRDKAISVLQTFFFDGV--IPKNAIS 337 (620)
Q Consensus 311 ~~~~~~~a~enL~~~L~~G~--~p~nvVn 337 (620)
...+...+++|+..|+ +|. .+.|.|+
T Consensus 404 ~~s~a~~~~~ni~~~~-~g~~~~l~n~V~ 431 (479)
T 1v8b_A 404 SFSFCNQTFAQLDLWQ-NKDTNKYENKVY 431 (479)
T ss_dssp HHHHHHHHHHHHHHHH-TTTSSSCCSSEE
T ss_pred HHHHHHHHHHHHHHHH-cCCCCcCCcceE
Confidence 7788899999999996 666 6666554
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.97 E-value=3.5e-33 Score=307.33 Aligned_cols=229 Identities=10% Similarity=0.012 Sum_probs=188.3
Q ss_pred CCCeEEE-EecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcce
Q 007040 80 RPYQLIL-CLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMR 158 (620)
Q Consensus 80 p~LK~I~-~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~ 158 (620)
++++.|+ .+++|+|++ .+|.++||.|+|++++++ +|||+. +|++...... ...+ |.+. ...
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~-l~~g-w~~~------~g~ 273 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRES-LVDG-IKRA------TDV 273 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTT-HHHH-HHHH------HCC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhh-hhhh-hhhc------ccc
Confidence 7888888 788999988 788999999999999999 999954 3555433322 2333 6421 124
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++.|++|||||+|.||+.+|++|++|||+|++||+++.........+.. ..++++++++||+|++|+ .|+++|+.
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~~l~ell~~aDiVi~~~----~t~~lI~~ 348 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VVTMEYAADKADIFVTAT----GNYHVINH 348 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-ECCHHHHTTTCSEEEECS----SSSCSBCH
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eCCHHHHHhcCCEEEECC----CcccccCH
Confidence 6899999999999999999999999999999999987432112223443 358999999999999998 58899999
Q ss_pred HHhhccCCCcEEEEcCCChh-hcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCC--CcEEEcCCCC-CCcHH-HHHH
Q 007040 239 ECLQHIKPGAFLVNTGSSQL-LDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREM--PNVLILPRSA-DYSEE-VWME 313 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~v-VDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~--pNVIlTPHiA-g~T~e-a~~~ 313 (620)
+.|+.||+|++|||+|||.+ ||+++| ++|++|+|+ +++|++ |++.++|||.+ |||++| |+| +.+.+ ....
T Consensus 349 ~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~--plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~ 423 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI--IFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNS 423 (494)
T ss_dssp HHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE--ECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHH
T ss_pred HHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE--ECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHH
Confidence 99999999999999999999 699999 999999998 788886 55568899998 999999 999 65644 6788
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccc
Q 007040 314 IRDKAISVLQTFFFDGVIPKNAIS 337 (620)
Q Consensus 314 ~~~~a~enL~~~L~~G~~p~nvVn 337 (620)
+...+++|+..|+ +|..+.|.|+
T Consensus 424 ~a~~~~~ni~~~~-~g~~~~n~V~ 446 (494)
T 3d64_A 424 FTNQTLAQIELFT-RGGEYANKVY 446 (494)
T ss_dssp HHHHHHHHHHHHH-HGGGSCSSEE
T ss_pred HHHHHHHHHHHHH-cCCCCCCcee
Confidence 8999999999997 6666777774
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.93 E-value=1.5e-25 Score=230.56 Aligned_cols=170 Identities=11% Similarity=0.043 Sum_probs=143.2
Q ss_pred cccccceEEEEe----------------cCCCCCHHHHhcCCCCeEEEEecccCCccch-HHHHhcCcEEEEcC------
Q 007040 55 GKIEAAAAVLLH----------------SLAYLPRAAQRRLRPYQLILCLGSSDRTVDS-ALAADLGLRLIHVD------ 111 (620)
Q Consensus 55 ~~l~~AdaVlv~----------------s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~-~aa~erGI~VtNtp------ 111 (620)
+.++++|+++++ ....+++++++++|+||+|+ +|+|++|+ ++|.++||.|+|+|
T Consensus 54 ~~~~~~d~ii~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~ 130 (293)
T 3d4o_A 54 VDWNTVDAILLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIA 130 (293)
T ss_dssp CCGGGCSEEECCTTCCCTTCBCCBSSCSCCCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHH
T ss_pred HHHhcCCEEEeccccccCCceeecccccCCccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceee
Confidence 457789999885 23468999999999999987 79999998 89999999999998
Q ss_pred CCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEE
Q 007040 112 TSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYF 191 (620)
Q Consensus 112 g~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~ 191 (620)
++++.+|||++++++|... ..++.|++|||||+|.||+.+|++|++||++|++|
T Consensus 131 ~~~~~svae~a~~~~l~~~--------------------------~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~ 184 (293)
T 3d4o_A 131 IYNSIPTAEGTIMMAIQHT--------------------------DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVG 184 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------------------------SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred eeccHhHHHHHHHHHHHhc--------------------------CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEE
Confidence 8999999999999988631 12579999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcee--cCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChh
Q 007040 192 DVPEGKGKVTFPSAARR--MDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 192 dr~~~~~~~~~~~g~~~--~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~v 258 (620)
|++..........+... ..+++++++++|+|++|+|. ++++.+.|+.||+|++|||++||+.
T Consensus 185 dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 185 ARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp ESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred ECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 99864322111223332 35789999999999999996 6999999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.87 E-value=4.1e-22 Score=205.49 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=136.0
Q ss_pred cccccceEEEEe----c----------CCC--CCHHHHhcCCCCeEEEEecccCCccc-hHHHHhcCcEEEEcCCCChHH
Q 007040 55 GKIEAAAAVLLH----S----------LAY--LPRAAQRRLRPYQLILCLGSSDRTVD-SALAADLGLRLIHVDTSRAEE 117 (620)
Q Consensus 55 ~~l~~AdaVlv~----s----------~~~--l~~e~l~~lp~LK~I~~~gaG~D~VD-~~aa~erGI~VtNtpg~~a~a 117 (620)
+.++++|+++++ . ..+ +++++++.+|++|+|+ +|+|++| +++|.++||.|+|+|+++ +
T Consensus 56 ~~~~~~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~ 130 (300)
T 2rir_A 56 IPFQQIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--D 130 (300)
T ss_dssp SCGGGCSEEECCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--H
T ss_pred HHHhcCCEEEeccccccCCcccccccccCCccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--c
Confidence 457789998872 1 235 7899999999999988 7899999 999999999999999974 3
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCC
Q 007040 118 IADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGK 197 (620)
Q Consensus 118 VAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~ 197 (620)
+ ++.|+++.. .+.|..... ....++.|++|||||+|.||+.+|+.|++||++|++||++...
T Consensus 131 v---------~~~r~~~~~------~g~~~~~~~---~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~ 192 (300)
T 2rir_A 131 I---------AIYNSIPTV------EGTIMLAIQ---HTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAH 192 (300)
T ss_dssp H---------HHHHHHHHH------HHHHHHHHH---TCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred e---------EEEcCccHH------HHHHHHHHH---hcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 3 234555433 223421100 1124689999999999999999999999999999999998643
Q ss_pred CCccccCCce--ecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChh
Q 007040 198 GKVTFPSAAR--RMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 198 ~~~~~~~g~~--~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~v 258 (620)
.......+.. ...++++++++||+|++|+|. ++++++.|+.||+|++|||++||+.
T Consensus 193 ~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 193 LARITEMGLVPFHTDELKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 2211112332 235799999999999999997 6899999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.86 E-value=5.7e-23 Score=226.51 Aligned_cols=225 Identities=11% Similarity=0.000 Sum_probs=173.1
Q ss_pred EEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCc
Q 007040 84 LILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGL 163 (620)
Q Consensus 84 ~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~Gk 163 (620)
++..+|+|+|++ .++.++||.++|++++++ +|||+. +|++...... ...+ |.+. ....+.|+
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s-~~~g-~~r~------~~~~l~Gk 275 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHS-LIDG-INRG------TDALIGGK 275 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHH-HHHH-HHHH------HCCCCTTC
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------Hhhhhhhhhh-hhHH-HHhc------cCCCCCcC
Confidence 344778999988 678899999999999999 999954 3333222211 1111 3211 01247899
Q ss_pred EEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhc
Q 007040 164 VLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQH 243 (620)
Q Consensus 164 tVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~ 243 (620)
+|+|||+|.||+.+|++|+++|++|+++|+++.....+...|.. ..++++++..+|+|++|++ +.++|+.+.|+.
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~ 350 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDIIMLEHIKA 350 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCSBCHHHHHH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHHHHHHHHHh
Confidence 99999999999999999999999999999987543323334444 3578999999999999986 557899899999
Q ss_pred cCCCcEEEEcCCChh-hcHHHHHH-HHHcCCcceeEeecCCCCC-CCCccccCCCcEE----EcCCCCCCcHHHHHHHHH
Q 007040 244 IKPGAFLVNTGSSQL-LDDCAVKQ-LLIDGTLAGCALDGAEGPQ-WMEAWVREMPNVL----ILPRSADYSEEVWMEIRD 316 (620)
Q Consensus 244 MK~gAiLINvgRG~v-VDe~AL~~-AL~~G~I~GAaLDV~E~P~-~~~spL~~~pNVI----lTPHiAg~T~ea~~~~~~ 316 (620)
||+|++|||+||+.+ +|..+|.. +|+++.|. +++|+++.|+ ...-+|+..+|++ +|||+++.+.+.+ .+
T Consensus 351 mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~---~~ 426 (494)
T 3ce6_A 351 MKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSF---AN 426 (494)
T ss_dssp SCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHH---HH
T ss_pred cCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHHH---HH
Confidence 999999999999999 99999998 88888888 6789987543 2223477788998 9999999888653 67
Q ss_pred HHHHHHHHHHHcCCCCCccc
Q 007040 317 KAISVLQTFFFDGVIPKNAI 336 (620)
Q Consensus 317 ~a~enL~~~L~~G~~p~nvV 336 (620)
.+++++..|+ +|+.+.+.|
T Consensus 427 qa~~ai~~~~-~g~~~~~~V 445 (494)
T 3ce6_A 427 QTIAQIELWT-KNDEYDNEV 445 (494)
T ss_dssp HHHHHHHHHH-TGGGCCSSE
T ss_pred HHHHHHHHHH-cCCCCCCEE
Confidence 8899999986 666555555
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.85 E-value=8.8e-22 Score=209.98 Aligned_cols=257 Identities=14% Similarity=0.067 Sum_probs=183.3
Q ss_pred cccccceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEE----------EcCCCChHHHHHHHHH
Q 007040 55 GKIEAAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLI----------HVDTSRAEEIADTVMA 124 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~Vt----------Ntpg~~a~aVAE~aLa 124 (620)
+.++++|+|+. ...+++.+.....+...++.....++|...++++.++||.++ |.|.++ ++||++..
T Consensus 63 ~~~~~adii~~-vk~p~~~e~~~l~~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~ 139 (377)
T 2vhw_A 63 QVWADADLLLK-VKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGR 139 (377)
T ss_dssp HHHHHCSEEEC-SSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHH
T ss_pred HHhccCCEEEE-eCCCChHHHhhcCCCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHH
Confidence 34556787643 334566666666777777777777888888999999999998 455544 66699985
Q ss_pred HHHHHH-hccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc
Q 007040 125 LLLGLL-RRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP 203 (620)
Q Consensus 125 LiLal~-Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~ 203 (620)
+++.+. |++.. ...+.|... .+..++.|++|+|||+|.||+.+|+.++++|++|+++|++.........
T Consensus 140 ~a~~~a~r~l~~-----~~~g~~~~~-----~~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 140 LAAQVGAYHLMR-----TQGGRGVLM-----GGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp HHHHHHHHHTSG-----GGTSCCCCT-----TCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hcCCCcccc-----cCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 555554 66632 233443211 1223689999999999999999999999999999999998643221111
Q ss_pred -CCce------ecCCHHhhhcCCcEEEEcc--cCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 204 -SAAR------RMDTLNDLLAASDVISLHC--AVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 204 -~g~~------~~~sL~eLL~~sDvVil~l--PlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
.+.. ...++.+++..+|+|++++ |.+ +|.++|+.+.++.||+|++|||+|.. .|
T Consensus 210 ~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~-------------~G--- 272 (377)
T 2vhw_A 210 EFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAID-------------QG--- 272 (377)
T ss_dssp HTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGG-------------TT---
T ss_pred hcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecC-------------CC---
Confidence 1111 1346788899999999966 555 78899999999999999999999931 11
Q ss_pred eeEeecCCC--CCCCCccccCCCcEE--EcCCCCCCcHHH-H--------HHHHHHHHHHHHHHHHcCCCCCccccCCCC
Q 007040 275 GCALDGAEG--PQWMEAWVREMPNVL--ILPRSADYSEEV-W--------MEIRDKAISVLQTFFFDGVIPKNAISDTEG 341 (620)
Q Consensus 275 GAaLDV~E~--P~~~~spL~~~pNVI--lTPHiAg~T~ea-~--------~~~~~~a~enL~~~L~~G~~p~nvVn~~~~ 341 (620)
| |||. |++.+.|++..+||+ +|||+++.+... . ..+.+.+.+++...+..+..+.+.|+...|
T Consensus 273 g----v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~v~~~~G 348 (377)
T 2vhw_A 273 G----CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEG 348 (377)
T ss_dssp C----SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTEEEETT
T ss_pred C----ccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHHHhCChhhhhhcChHHhCcEEeeCC
Confidence 1 6764 666788999999998 999999988662 2 333344445544344567778999999999
Q ss_pred ccCC
Q 007040 342 CENE 345 (620)
Q Consensus 342 y~~~ 345 (620)
|...
T Consensus 349 ~i~~ 352 (377)
T 2vhw_A 349 ALLS 352 (377)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9654
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.74 E-value=8.6e-19 Score=186.06 Aligned_cols=257 Identities=15% Similarity=0.150 Sum_probs=168.3
Q ss_pred ccccceEEEEecCCCCCHHHHhcC-CCCeEEEEecccCCccchHHHHhcCcEEE---EcCCC-Ch----HHHHHHHH--H
Q 007040 56 KIEAAAAVLLHSLAYLPRAAQRRL-RPYQLILCLGSSDRTVDSALAADLGLRLI---HVDTS-RA----EEIADTVM--A 124 (620)
Q Consensus 56 ~l~~AdaVlv~s~~~l~~e~l~~l-p~LK~I~~~gaG~D~VD~~aa~erGI~Vt---Ntpg~-~a----~aVAE~aL--a 124 (620)
.+ ++|+|+... .++ .+.+..+ +..++|.....+.+..+++++.++||.++ +.+.. .. .++++.+- +
T Consensus 63 ~~-~ad~il~vk-~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~a 139 (369)
T 2eez_A 63 AW-GAEMVVKVK-EPL-PEEYGFLREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMA 139 (369)
T ss_dssp HT-TSSEEECSS-CCC-GGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHH
T ss_pred ee-cCCEEEEEC-CCC-HHHHhhcCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHH
Confidence 45 688877443 244 4446776 66999999889999999999999999998 44432 11 44554443 4
Q ss_pred HHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-
Q 007040 125 LLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP- 203 (620)
Q Consensus 125 LiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~- 203 (620)
.++++. .+..... .++.|. .+...+.+++|+|+|.|.||+.+|+.++++|++|+++|++.........
T Consensus 140 v~~a~~-~l~~~~~---g~~~~~-------~~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~ 208 (369)
T 2eez_A 140 PQVGAQ-FLEKPKG---GRGVLL-------GGVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV 208 (369)
T ss_dssp HHHHHH-HTSGGGT---SCCCCT-------TCBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHH-HHHHhcC---CCceec-------CCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 333332 2211100 011222 1224689999999999999999999999999999999998643221111
Q ss_pred CCce------ecCCHHhhhcCCcEEEEcccCCh-hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCccee
Q 007040 204 SAAR------RMDTLNDLLAASDVISLHCAVTD-ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGC 276 (620)
Q Consensus 204 ~g~~------~~~sL~eLL~~sDvVil~lPlT~-~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GA 276 (620)
.+.. ...++++++..+|+|+.+++... .+..++..+.++.||+|+++||++-. .| |+
T Consensus 209 ~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~ 272 (369)
T 2eez_A 209 FGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC 272 (369)
T ss_dssp TTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC----------------------
T ss_pred cCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC
Confidence 1111 13457788899999999999776 67788999999999999999999832 12 44
Q ss_pred EeecCCCCCCCCccccCCCcEE---------EcCCCCCC--cHHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCccCC
Q 007040 277 ALDGAEGPQWMEAWVREMPNVL---------ILPRSADY--SEEVWMEIRDKAISVLQTFFFDGVIPKNAISDTEGCENE 345 (620)
Q Consensus 277 aLDV~E~P~~~~spL~~~pNVI---------lTPHiAg~--T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~~~y~~~ 345 (620)
+|+++ |.+.+.|++..+||+ ++||+|+. +.+.+..+.+.+.+++..+ ..++.+.+.++...||...
T Consensus 273 -~d~~e-p~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g~~~~-~~~~~l~~~~~~~~G~~~~ 349 (369)
T 2eez_A 273 -VETIR-PTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKGLDAL-LEDAALLKGLNTHKGRLTH 349 (369)
T ss_dssp ---------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHTTHHH-HSCHHHHTTEEEETTEECC
T ss_pred -CCccc-CCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcChhhh-hcChHHhcCEEeeCCEEcC
Confidence 99984 555677888899999 78998885 5677888999999888665 5888888999999888654
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.73 E-value=2.2e-19 Score=194.47 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=122.5
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhh-CCCEEEEEC-CCCCCCCccccCCceecCCHHhhhcCCcE-EEEcccCChhhHhhc
Q 007040 160 CRGLVLGIVGRSASARALATRSLS-FKMSVLYFD-VPEGKGKVTFPSAARRMDTLNDLLAASDV-ISLHCAVTDETIQII 236 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~Lka-fG~~V~~~d-r~~~~~~~~~~~g~~~~~sL~eLL~~sDv-Vil~lPlT~~T~~lI 236 (620)
|.|++|||+|+|+||+.+|++|++ |||+|++++ ++. . .+. .. ..+++++++.+|. .++ +|+ ++|++ |
T Consensus 210 l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g-~---~~~--~~-gvdl~~L~~~~d~~~~l-~~l-~~t~~-i 279 (419)
T 1gtm_A 210 LKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKG-G---IYN--PD-GLNADEVLKWKNEHGSV-KDF-PGATN-I 279 (419)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSC-E---EEE--EE-EECHHHHHHHHHHHSSS-TTC-TTSEE-E
T ss_pred cCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCc-c---ccC--cc-CCCHHHHHHHHHhcCEe-ecC-ccCee-e
Confidence 899999999999999999999999 999999995 443 1 111 11 1267777775554 233 576 67888 8
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCC-ccccCCCcEEEcCCC----C-------
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWME-AWVREMPNVLILPRS----A------- 304 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~-spL~~~pNVIlTPHi----A------- 304 (620)
+.+.|..||+ .+|||++||.+||+++ +++|+.+.|.+++ .+|++++ ++||..+||++|||+ |
T Consensus 280 ~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~ 353 (419)
T 1gtm_A 280 TNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYF 353 (419)
T ss_dssp CHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHH
T ss_pred CHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeee
Confidence 9999999998 5999999999999999 6999999999887 3354443 699999999999998 6
Q ss_pred ----------CCcHHHHHHHHHHHHHHHHHHHH
Q 007040 305 ----------DYSEEVWMEIRDKAISVLQTFFF 327 (620)
Q Consensus 305 ----------g~T~ea~~~~~~~a~enL~~~L~ 327 (620)
|.++++..++.+.+.+++.+++.
T Consensus 354 E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 354 EWVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888888899888873
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.65 E-value=1.9e-16 Score=171.76 Aligned_cols=156 Identities=13% Similarity=0.127 Sum_probs=115.3
Q ss_pred ecccCCccc-hHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEE
Q 007040 88 LGSSDRTVD-SALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLG 166 (620)
Q Consensus 88 ~gaG~D~VD-~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVG 166 (620)
+++|+..+. .....+++|+|+|++........|...+..-.+...+. . .. ...+.|++||
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~----r---at------------g~~L~GktVg 215 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK----R---AT------------DVMIAGKTAC 215 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH----H---HH------------CCCCTTCEEE
T ss_pred cCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHH----H---hc------------CCcccCCEEE
Confidence 345654332 23455789999999876666655544443333332221 1 10 1358999999
Q ss_pred EEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCC
Q 007040 167 IVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKP 246 (620)
Q Consensus 167 IIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~ 246 (620)
|||+|.||+.+|++|++||++|+++|+++.....+...+.. ..+++++++.||+|++ ++.|.++|+.+.|+.||+
T Consensus 216 IiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~-~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~ 290 (436)
T 3h9u_A 216 VCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQ-VLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRD 290 (436)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCT
T ss_pred EEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCe-ecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCC
Confidence 99999999999999999999999999986433222233433 4589999999999996 446889999999999999
Q ss_pred CcEEEEcCCChh-hcHHHHHHH
Q 007040 247 GAFLVNTGSSQL-LDDCAVKQL 267 (620)
Q Consensus 247 gAiLINvgRG~v-VDe~AL~~A 267 (620)
|++|||+|||.+ ||.++|.+.
T Consensus 291 gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 291 DAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp TEEEEECSSSGGGBCHHHHHHH
T ss_pred CcEEEEeCCCCCccCHHHHHhh
Confidence 999999999998 999998764
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.62 E-value=4.2e-16 Score=167.78 Aligned_cols=194 Identities=12% Similarity=0.082 Sum_probs=133.0
Q ss_pred ceEEEEecCCCCCHHHHhcC-CCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHH
Q 007040 60 AAAVLLHSLAYLPRAAQRRL-RPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLAR 138 (620)
Q Consensus 60 AdaVlv~s~~~l~~e~l~~l-p~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~ 138 (620)
+|+|+... ....+.++.+ +++++|...+.|+|++|++++.++||.+++ .+.|+|++.++.|.+++.+.....
T Consensus 73 adiil~vk--~p~~~~i~~l~~~~~li~~~~~~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag 145 (401)
T 1x13_A 73 SEIILKVN--APLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAG 145 (401)
T ss_dssp SSEEECSS--CCCHHHHTTCCTTCEEEECCCGGGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHH
T ss_pred CCeEEEeC--CCCHHHHHHhcCCCcEEEEecCCCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHH
Confidence 77776542 2356778887 679999999999999999999999999964 455666655554333333322221
Q ss_pred -HHHHhCCCC-CCCCC-CCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecC-----
Q 007040 139 -HALSASGWL-GSVQP-LCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMD----- 210 (620)
Q Consensus 139 -~~~~~g~W~-~~~~~-~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~----- 210 (620)
.....+.|. ....+ .......+.|.+|+|||+|.||..+++.++++|++|+++|++..........+.....
T Consensus 146 ~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~ 225 (401)
T 1x13_A 146 YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 225 (401)
T ss_dssp HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC----
T ss_pred HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccc
Confidence 111122221 11000 0000125889999999999999999999999999999999987543211122322211
Q ss_pred ----------------------CHHhhhcCCcEEEEc--ccCChhhHhhcCHHHhhccCCCcEEEEcC--CChhhcH
Q 007040 211 ----------------------TLNDLLAASDVISLH--CAVTDETIQIINAECLQHIKPGAFLVNTG--SSQLLDD 261 (620)
Q Consensus 211 ----------------------sL~eLL~~sDvVil~--lPlT~~T~~lI~~~~L~~MK~gAiLINvg--RG~vVDe 261 (620)
.+.+++..+|+|+.+ +|.. .+.++|+.+.++.||+|++|||+| ||+.++.
T Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 226 EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp ----CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred cccccccchhhccHHHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 377888899999999 5542 356789999999999999999999 7765543
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.58 E-value=1.4e-15 Score=165.30 Aligned_cols=142 Identities=15% Similarity=0.092 Sum_probs=104.8
Q ss_pred HhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHH
Q 007040 101 ADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATR 180 (620)
Q Consensus 101 ~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~ 180 (620)
-...+++.|+.... ..+-+.....+...+...... .. ...+.|+++||||+|.||+.+|++
T Consensus 205 g~L~~PvinVnds~----tK~~fDn~yG~~eslvdgI~R---at------------g~~L~GKTVgVIG~G~IGr~vA~~ 265 (464)
T 3n58_A 205 GLLPFPAINVNDSV----TKSKFDNKYGCKESLVDGIRR---GT------------DVMMAGKVAVVCGYGDVGKGSAQS 265 (464)
T ss_dssp TCCCSCEEECTTSH----HHHTTHHHHHHHHHHHHHHHH---HH------------CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCCCCEEeeccHh----hhhhhhhhhcchHHHHHHHHH---hc------------CCcccCCEEEEECcCHHHHHHHHH
Confidence 34578999987544 344333333333322221111 10 135899999999999999999999
Q ss_pred HhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChh-h
Q 007040 181 SLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQL-L 259 (620)
Q Consensus 181 LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~v-V 259 (620)
|++|||+|+++|+.+.....+...+.. ..+++++++.||+|+++. .|.++|+.+.|+.||+|++|||+|||.+ +
T Consensus 266 lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAILINvGRgdvEI 340 (464)
T 3n58_A 266 LAGAGARVKVTEVDPICALQAAMDGFE-VVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCIVGNIGHFDNEI 340 (464)
T ss_dssp HHHTTCEEEEECSSHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEEEEECSSSTTTB
T ss_pred HHHCCCEEEEEeCCcchhhHHHhcCce-eccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeEEEEcCCCCccc
Confidence 999999999999876332222223433 358999999999999864 3789999999999999999999999998 9
Q ss_pred cHHHHHH
Q 007040 260 DDCAVKQ 266 (620)
Q Consensus 260 De~AL~~ 266 (620)
|.++|.+
T Consensus 341 D~~aL~~ 347 (464)
T 3n58_A 341 QVAALRN 347 (464)
T ss_dssp TCGGGTT
T ss_pred CHHHHHh
Confidence 9988873
No 47
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.56 E-value=6.8e-15 Score=157.01 Aligned_cols=194 Identities=10% Similarity=0.067 Sum_probs=129.8
Q ss_pred cccccceEEEEecCCCC----CHHHHhcCCC-CeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHH
Q 007040 55 GKIEAAAAVLLHSLAYL----PRAAQRRLRP-YQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGL 129 (620)
Q Consensus 55 ~~l~~AdaVlv~s~~~l----~~e~l~~lp~-LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal 129 (620)
+.+.++|+|+.... ++ +++.++.+++ +++|.....+.|+.+++++.++||.+++.... .+.+++..+. +|+.
T Consensus 63 ~~~~~adiil~v~~-p~~~~~~~~~i~~l~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e~~-~~~~~~~~l~-~l~~ 139 (384)
T 1l7d_A 63 QALSQADVVWKVQR-PMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELM-PRISRAQSMD-ILSS 139 (384)
T ss_dssp HHHSSCSEEEEEEC-CCCGGGSCCGGGGSCTTCEEEEECCGGGCHHHHHHHHHTTCEEEEGGGC-CCSGGGGGGC-HHHH
T ss_pred hhhcCCCEEEEecC-cccccCCHHHHHhhccCCEEEEEecccCCHHHHHHHHHCCCEEEEeccc-cccccccccc-hhhH
Confidence 45678898876643 44 6788899975 88888888999999999999999999984211 1111112222 1222
Q ss_pred HhccHHHHHHHHHh-----CCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC
Q 007040 130 LRRTHLLARHALSA-----SGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS 204 (620)
Q Consensus 130 ~Rrl~~~~~~~~~~-----g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~ 204 (620)
...+..+ .. ... +.|.. ....+...+.|++|+|||+|.||..+++.++++|++|+++|++....+.....
T Consensus 140 ~a~~ag~-~a-v~~~~~~~~~~~~---~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~ 214 (384)
T 1l7d_A 140 QSNLAGY-RA-VIDGAYEFARAFP---MMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL 214 (384)
T ss_dssp HHHHHHH-HH-HHHHHHHCSSCSS---CEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred HHHHHHH-HH-HHHHHHHhhhccc---chhccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 2221110 00 111 22221 11112246899999999999999999999999999999999987543211122
Q ss_pred Cceec-----------------------------CCHHhhhcCCcEEEEcc--cCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 205 AARRM-----------------------------DTLNDLLAASDVISLHC--AVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 205 g~~~~-----------------------------~sL~eLL~~sDvVil~l--PlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
+.... ..+.+++..+|+|+.++ |.+ .+.++|+.+.++.||+|+++||+
T Consensus 215 Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdv 293 (384)
T 1l7d_A 215 GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDL 293 (384)
T ss_dssp TCEECCC-----------------------CCHHHHHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEET
T ss_pred CCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEE
Confidence 22211 01778899999999877 443 24578899999999999999999
Q ss_pred C--CCh
Q 007040 254 G--SSQ 257 (620)
Q Consensus 254 g--RG~ 257 (620)
+ ||+
T Consensus 294 a~~~gg 299 (384)
T 1l7d_A 294 AVEAGG 299 (384)
T ss_dssp TGGGTC
T ss_pred ecCCCC
Confidence 8 654
No 48
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.55 E-value=3.8e-17 Score=175.62 Aligned_cols=223 Identities=14% Similarity=0.140 Sum_probs=161.4
Q ss_pred CCeEEEEecccCCccchHHHH-----hcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCC
Q 007040 81 PYQLILCLGSSDRTVDSALAA-----DLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCR 155 (620)
Q Consensus 81 ~LK~I~~~gaG~D~VD~~aa~-----erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~ 155 (620)
.+++|...|+|+|++++..+. +.++.+++.+|.. .+++++.+.+++.+.|++...... ..+.|.-.......
T Consensus 81 a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~-~~~~~~~~~~a~~~~k~v~~~~~~--~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 81 AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTL-DEALKIVFRRAINLGKRAREETRI--SEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHSST--TCSCCSHHHHHHHH
T ss_pred HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCc-hHHHHHHHHHHhhhhccCcchhhh--cCCCccHHHHHHHH
Confidence 467888999999999988887 7789999998884 689999999999999987544321 22333210000000
Q ss_pred ---cceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC-ccccCCce--ecCCHHhhhcCCcEEEEcccC
Q 007040 156 ---GMRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK-VTFPSAAR--RMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 156 ---~~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~-~~~~~g~~--~~~sL~eLL~~sDvVil~lPl 228 (620)
...++.|++|+|||+|.||+.+|+.|+++|+ +|+++|++..... .....+.. ...++.+++..+|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 0114789999999999999999999999999 9999999864321 11111222 235688889999999999875
Q ss_pred ChhhHhhcCHHHhhc--cC----CCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEE--c
Q 007040 229 TDETIQIINAECLQH--IK----PGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLI--L 300 (620)
Q Consensus 229 T~~T~~lI~~~~L~~--MK----~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIl--T 300 (620)
+ ..+++.+.+.. || ++.++||++ . |.+.+++++++|||++ +
T Consensus 238 ~---~~~~~~~~l~~~~lk~r~~~~~v~vdia---------------------------~-P~~i~~~l~~l~~v~l~d~ 286 (404)
T 1gpj_A 238 P---HPVIHVDDVREALRKRDRRSPILIIDIA---------------------------N-PRDVEEGVENIEDVEVRTI 286 (404)
T ss_dssp S---SCCBCHHHHHHHHHHCSSCCCEEEEECC---------------------------S-SCSBCTTGGGSTTEEEEEH
T ss_pred C---CceecHHHHHHHHHhccCCCCEEEEEcc---------------------------C-CCCCCccccccCCeEEEeH
Confidence 4 45677777776 42 456666654 3 5556778999999999 9
Q ss_pred CCCCCCcHHHHH----------HHHHHHHHHHHHHHHcCCCCCccccC
Q 007040 301 PRSADYSEEVWM----------EIRDKAISVLQTFFFDGVIPKNAISD 338 (620)
Q Consensus 301 PHiAg~T~ea~~----------~~~~~a~enL~~~L~~G~~p~nvVn~ 338 (620)
||+++.+.++.. .+....++++..|+ .+..+..+|..
T Consensus 287 d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~-~~~~~~~~I~~ 333 (404)
T 1gpj_A 287 DDLRVIARENLERRRKEIPKVEKLIEEELSTVEEEL-EKLKERRLVAD 333 (404)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccHHHHHH
Confidence 999998887654 67778888888986 55555555543
No 49
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.51 E-value=1.3e-14 Score=157.24 Aligned_cols=141 Identities=13% Similarity=0.182 Sum_probs=104.1
Q ss_pred HhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHH
Q 007040 101 ADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATR 180 (620)
Q Consensus 101 ~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~ 180 (620)
-+..++|.|+........-|...+.--.+...+ . +.. ...+.|++++|+|+|.||+.+|++
T Consensus 178 g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi----~---rat------------~~~L~GktV~ViG~G~IGk~vA~~ 238 (435)
T 3gvp_A 178 GKLCVPAMNVNDSVTKQKFDNLYCCRESILDGL----K---RTT------------DMMFGGKQVVVCGYGEVGKGCCAA 238 (435)
T ss_dssp CCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHH----H---HHH------------CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCCCCEEEecchhhhhhhhhhhhhHHHHHHHH----H---Hhh------------CceecCCEEEEEeeCHHHHHHHHH
Confidence 356899999988766555443322222222111 0 110 135899999999999999999999
Q ss_pred HhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChh-h
Q 007040 181 SLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQL-L 259 (620)
Q Consensus 181 LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~v-V 259 (620)
|++||++|+++|+++.....+...+.. ..+++++++.+|+|++| +.|.++|+.+.|+.||+|++|||+|||.+ +
T Consensus 239 Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailINvgrg~~EI 313 (435)
T 3gvp_A 239 LKAMGSIVYVTEIDPICALQACMDGFR-LVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCNMGHSNTEI 313 (435)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEECSSTTTTB
T ss_pred HHHCCCEEEEEeCChhhhHHHHHcCCE-eccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEEecCCCccC
Confidence 999999999999876322222233433 45899999999999995 45788999999999999999999999998 7
Q ss_pred cHHHHH
Q 007040 260 DDCAVK 265 (620)
Q Consensus 260 De~AL~ 265 (620)
|..+|.
T Consensus 314 d~~~L~ 319 (435)
T 3gvp_A 314 DVASLR 319 (435)
T ss_dssp TGGGGC
T ss_pred CHHHHH
Confidence 776663
No 50
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.38 E-value=1.4e-12 Score=134.75 Aligned_cols=116 Identities=9% Similarity=0.035 Sum_probs=99.9
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQ 242 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~ 242 (620)
++|||||+|.||..||++|...|++|++||+++...+.....|.....++.++++.||+|++++|..+.+..++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 47999999999999999999999999999999877766666788888999999999999999999988888888888999
Q ss_pred ccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 243 HIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 243 ~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
.+++|.++|+++....-+...+.+.+.+..+. .+|.
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 99999999999999999999999999988775 6776
No 51
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.35 E-value=6.9e-13 Score=137.53 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=102.4
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC--HHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN--AEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~--~~~ 240 (620)
++|||||+|.||..||++|...|++|++||+++...+.....|.....++.|+++.||+|++|+|..+.++.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 479999999999999999999999999999998665555556778889999999999999999999999888773 347
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
++.+++|.++||++....-+...+.+.+.+..+. .||.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 8899999999999999999999999999988775 7775
No 52
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.33 E-value=4.9e-12 Score=131.69 Aligned_cols=149 Identities=13% Similarity=0.080 Sum_probs=109.1
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCccccCCc--eecCCHHh-hhcCCcEEEEcccCChhhH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKVTFPSAA--RRMDTLND-LLAASDVISLHCAVTDETI 233 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~~~~g~--~~~~sL~e-LL~~sDvVil~lPlT~~T~ 233 (620)
++..++|||||+|.||..+|+.|+..|+ +|++||++..........|. ....++++ ++++||+|++++|... +.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HH
Confidence 3455899999999999999999999999 99999998754332233343 33567888 8999999999999663 44
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCC--CCCCCccccCCCcEEEcCCCCCCcHHH
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEG--PQWMEAWVREMPNVLILPRSADYSEEV 310 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~--P~~~~spL~~~pNVIlTPHiAg~T~ea 310 (620)
.++ .+....+++++++++++.......+++.+.+....+.+..+-+.+. |......|+....+++||+-+ .+.+.
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~-~~~~~ 185 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKK-TDKKR 185 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTT-SCHHH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCC-CCHHH
Confidence 555 5566779999999999987765566677776554444455555443 334556788888999999844 33443
No 53
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.30 E-value=7.3e-12 Score=126.49 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=103.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCccccCCce--ecCCHHhhhc-CCcEEEEcccCChhhHhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKVTFPSAAR--RMDTLNDLLA-ASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~~~~g~~--~~~sL~eLL~-~sDvVil~lPlT~~T~~lI~ 237 (620)
++|||||+|.||..+|..|...|+ +|++||++..........+.. ...++++++. .+|+|++++|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 479999999999999999999998 999999986433222222332 2457888999 999999999965 4556664
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCC--CCCCCCccccCCCcEEEcCCCCCC
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAE--GPQWMEAWVREMPNVLILPRSADY 306 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E--~P~~~~spL~~~pNVIlTPHiAg~ 306 (620)
+....+++++++++++++.....+.+.+.+..+.+.+..+-+.+ .|......++..++++++||.++.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~ 150 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD 150 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCC
Confidence 45667999999999999887777778888876433322222222 133445577788899999997665
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.28 E-value=2.9e-12 Score=132.23 Aligned_cols=120 Identities=13% Similarity=0.129 Sum_probs=99.9
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++..++|||||+|.||..+|+.|...|++|++||+++.........+.....++.+++++||+|++++|....++.++..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 35678899999999999999999999999999999875444333345666789999999999999999988778888864
Q ss_pred HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 239 ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
+.+..+++|.++||++++...+..++.+.+....+. .+|.
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 346778899999999999999999999999876554 5564
No 55
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.24 E-value=1.5e-11 Score=126.29 Aligned_cols=115 Identities=19% Similarity=0.251 Sum_probs=98.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
.++|||||+|.||..+|+.|...|++|++||+++...+.....+.....+++++++ ||+|++++|....++.++ ...+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 35899999999999999999999999999999987655444456667789999999 999999999877888777 6778
Q ss_pred hccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 242 QHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 242 ~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
..+++|.++||+++........+.+.+.+..+. .+|.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~~ 129 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH--IVDA 129 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE--EEEC
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE--EEeC
Confidence 889999999999999999999999999876543 4553
No 56
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.23 E-value=1.4e-11 Score=128.00 Aligned_cols=120 Identities=12% Similarity=0.082 Sum_probs=100.0
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
+...++|||||+|.||..+|+.|...|++|++||+++...+.....++....++.++++.||+|++++|....+..++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567999999999999999999999999999999875544333346667789999999999999999987777777753
Q ss_pred -HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 239 -ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 239 -~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
..+..+++|.++||++++...+...+.+.+.+..+. .+|.
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~~ 148 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA--HLDT 148 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE--EEeC
Confidence 567789999999999999999999999999886554 4554
No 57
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.21 E-value=1.7e-11 Score=124.73 Aligned_cols=115 Identities=15% Similarity=0.111 Sum_probs=97.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc--CHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII--NAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI--~~~~ 240 (620)
++|||||+|.||..+|+.|...|++|++||+++...+.....+.....++.++++.||+|++++|....+..++ ....
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 68999999999999999999999999999998765543334466677899999999999999999877777776 2456
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD 279 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD 279 (620)
+..+++|.++||+++....+...+.+.+.+..+. .+|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR--FLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 7889999999999999999999999998876553 455
No 58
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.21 E-value=2e-11 Score=126.10 Aligned_cols=118 Identities=8% Similarity=0.112 Sum_probs=98.7
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc--C
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII--N 237 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI--~ 237 (620)
..-++|||||+|.||..+|+.|...|++|++||++..........+.....++.++++.||+|++++|....+..++ .
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 45578999999999999999999999999999998865543334466667899999999999999999877777776 2
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD 279 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD 279 (620)
...+..+++|.++||+++........+.+.+.+..+. .+|
T Consensus 99 ~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~v~ 138 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR--FVE 138 (310)
T ss_dssp TCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 4567889999999999999999999999998876543 455
No 59
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.19 E-value=2.7e-11 Score=128.58 Aligned_cols=114 Identities=10% Similarity=0.137 Sum_probs=96.9
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCC---cEEEEcccCChhhHhhc
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAAS---DVISLHCAVTDETIQII 236 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~s---DvVil~lPlT~~T~~lI 236 (620)
+.+++|||||+|.||..+|+.|...|++|++||++..........++....++.++++.+ |+|++++|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 467899999999999999999999999999999987544433334566667999999999 9999999987 777777
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcce
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAG 275 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~G 275 (620)
...+..+++|.+|||++++...+...+.+.+.+..+..
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~ 136 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITY 136 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEE
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEE
Confidence 56788899999999999999999999999999877753
No 60
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.18 E-value=3.3e-11 Score=123.09 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=96.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH--HH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA--EC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~--~~ 240 (620)
++|||||+|.||..+|+.|...|++|++||++..........+.....++.++++.||+|++++|....+..++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 5899999999999999999999999999999875444333346666789999999999999999988777777742 56
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
+..++++.++||++++.......+.+.+.+..+. .+|.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~--~~~~ 121 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC--EEEC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE--EEEE
Confidence 7789999999999999999988999998875443 4553
No 61
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.18 E-value=1.8e-11 Score=124.53 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=96.4
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc--CHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII--NAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI--~~~~ 240 (620)
++|||||+|.||..+|+.|...|++|++||+++...+.....+.....++.++++.||+|++++|....++.++ ....
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 47999999999999999999999999999998865543333456667799999999999999999877777776 2456
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
+..+++|.++||++++.......+.+.+.+..+. .+|.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~~~~ 119 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR--FLEA 119 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEEC
Confidence 7889999999999999999999999988876543 4553
No 62
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.16 E-value=2.3e-11 Score=124.90 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=95.3
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee-cCCHHhhhcCCcEEEEcccCChhhHhhcC--H
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR-MDTLNDLLAASDVISLHCAVTDETIQIIN--A 238 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~-~~sL~eLL~~sDvVil~lPlT~~T~~lI~--~ 238 (620)
.++|||||+|.||..+|+.|...|++|++||+++...+.....+... ..++.++++.||+|++++|....++.++. .
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999875443333334544 67899999999999999998777777763 4
Q ss_pred HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee
Q 007040 239 ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD 279 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD 279 (620)
..+..+++|+++||+++........+.+.+.+..+. .+|
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 125 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN--MLD 125 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 567789999999999999999999999998876543 455
No 63
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.15 E-value=1.7e-10 Score=117.69 Aligned_cols=140 Identities=13% Similarity=0.074 Sum_probs=101.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-------------------------CceecCCHHhhhc
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-------------------------AARRMDTLNDLLA 217 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-------------------------g~~~~~sL~eLL~ 217 (620)
++|||||+|.||..+|..+...|++|++||++.......... .+....++.++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 589999999999999999999999999999986432211110 1234578889999
Q ss_pred CCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcE
Q 007040 218 ASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNV 297 (620)
Q Consensus 218 ~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNV 297 (620)
.||+|++++|.+.+....+-.+....++++++|++.+.+ +...++.+++... ...+++..+. | .+.++.+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-p------~~~~~lv 154 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-H------VWVNNTA 154 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-S------TTTSCEE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-C------cccCceE
Confidence 999999999999887777767788889999999965554 3456777777542 3335555443 2 3467889
Q ss_pred EEcCCCCCCcHHHHHH
Q 007040 298 LILPRSADYSEEVWME 313 (620)
Q Consensus 298 IlTPHiAg~T~ea~~~ 313 (620)
.++||. ..+.+..+.
T Consensus 155 evv~~~-~t~~~~~~~ 169 (283)
T 4e12_A 155 EVMGTT-KTDPEVYQQ 169 (283)
T ss_dssp EEEECT-TSCHHHHHH
T ss_pred EEEeCC-CCCHHHHHH
Confidence 999984 334444443
No 64
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.12 E-value=9.1e-11 Score=121.47 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=93.3
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC--CCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE--GKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~--~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI 236 (620)
...++|||||+|.||..+|+.|...|+ +|++||++. ...+.....+.....++.++++.||+|++++|....... +
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~-~ 100 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEV-A 100 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHH-H
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHH-H
Confidence 346789999999999999999999999 999999973 222222234566677999999999999999998765543 3
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeec
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDG 280 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV 280 (620)
.+.+..+++++++||+++.......++.+.+.+..+....+|.
T Consensus 101 -~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 101 -QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp -HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred -HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 5677889999999999999999999999988875323345664
No 65
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=4.5e-11 Score=126.22 Aligned_cols=140 Identities=11% Similarity=0.036 Sum_probs=99.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcC----CcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAA----SDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~----sDvVil~lPlT~~T~~lI~ 237 (620)
-++|||||+|.||.++|+.|+..|++|++||+++.........|+....++.++++. +|+|++++|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 357999999999999999999999999999998754443334455556788888765 6999999994 46667763
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHH-cCCcceeEeecCCC--CCCCCccccCCCcEEEcCCCC
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLI-DGTLAGCALDGAEG--PQWMEAWVREMPNVLILPRSA 304 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~-~G~I~GAaLDV~E~--P~~~~spL~~~pNVIlTPHiA 304 (620)
.+..++++++++|++..+....+++.+.+. ...+.++.+-+.+. |......|++..++++||+-.
T Consensus 87 --~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~ 154 (341)
T 3ktd_A 87 --AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQL 154 (341)
T ss_dssp --HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGG
T ss_pred --HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCC
Confidence 344469999999998876544444444432 12233344444442 334556788888899999743
No 66
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.10 E-value=1.3e-10 Score=117.75 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=100.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--CCEEEEECCCCCCCCccccCCc--eecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGRSASARALATRSLSF--KMSVLYFDVPEGKGKVTFPSAA--RRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~~~~~g~--~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++|||||+|.||..+|..|... |++|++||++..........+. ....++++++.++|+|++++|... ...++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~- 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK- 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH-
Confidence 5899999999999999999866 7899999998643322112233 234578888999999999999553 355553
Q ss_pred HHhhc-cCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee---cC--C--CCCCCCccccCCCcEEEcCCCCCC
Q 007040 239 ECLQH-IKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD---GA--E--GPQWMEAWVREMPNVLILPRSADY 306 (620)
Q Consensus 239 ~~L~~-MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD---V~--E--~P~~~~spL~~~pNVIlTPHiAg~ 306 (620)
+.... +++++++|+++++.....+.+.+.+....+. .++ ++ + .|......++..++++++||.++.
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 35566 8999999999998877677788877652222 233 11 1 244445577788889999987654
No 67
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.07 E-value=4.8e-10 Score=112.86 Aligned_cols=139 Identities=15% Similarity=0.177 Sum_probs=95.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc--eecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA--RRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~--~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
++|+|||+|.||..+|+.|...|++|++||++..........+. ....+++++ ..+|+|++++|. ..+..++. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~~-~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTLE-KL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHHH-HH
Confidence 47999999999999999999999999999998643322112232 234578888 899999999994 35555653 45
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee--cCCCCCCCCccccCCCcEEEcCCCCC
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD--GAEGPQWMEAWVREMPNVLILPRSAD 305 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD--V~E~P~~~~spL~~~pNVIlTPHiAg 305 (620)
...+++++++|+++.......+.+.+.+. ..+.+..+- +...|....+.++..+.++++|+.+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~-~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~ 143 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS-GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT 143 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST-TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTC
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC-CEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCC
Confidence 66789999999998877666666665543 222221221 11123334445666678889997554
No 68
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.05 E-value=3.3e-10 Score=117.75 Aligned_cols=111 Identities=11% Similarity=0.054 Sum_probs=89.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC-CEEEEECCCCCCC-------CccccCCceecC-CHHhhhcCCcEEEEcccCChhhH
Q 007040 163 LVLGIVGRSASARALATRSLSFK-MSVLYFDVPEGKG-------KVTFPSAARRMD-TLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG-~~V~~~dr~~~~~-------~~~~~~g~~~~~-sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
++|||||+|.||..+|+.|...| ++|++||+++... ......+. .. ++.+++++||+|++++|......
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~~ 102 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATKA 102 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHHH
Confidence 67999999999999999999999 9999999986211 11111233 45 78899999999999999876665
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD 279 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD 279 (620)
.+ .+.+..++++.++||+++........+.+.+.+..+. .+|
T Consensus 103 ~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~--~~d 144 (317)
T 4ezb_A 103 VA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS--FVE 144 (317)
T ss_dssp HH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE--EEE
T ss_pred HH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 54 6677889999999999999999999999999876543 455
No 69
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.04 E-value=5.6e-10 Score=120.42 Aligned_cols=181 Identities=12% Similarity=0.128 Sum_probs=111.8
Q ss_pred cccceEEEEecCCCCCHHHHhcCCCCeEEEE-ecccCCccchHHHHhcCcEEEEc---CCCC-h------HHHHHHHH--
Q 007040 57 IEAAAAVLLHSLAYLPRAAQRRLRPYQLILC-LGSSDRTVDSALAADLGLRLIHV---DTSR-A------EEIADTVM-- 123 (620)
Q Consensus 57 l~~AdaVlv~s~~~l~~e~l~~lp~LK~I~~-~gaG~D~VD~~aa~erGI~VtNt---pg~~-a------~aVAE~aL-- 123 (620)
+.++|+|+.-. ..+++.+..++.=+++.+ .--.-+.--++++.++||...-- |... + .+++|.+=
T Consensus 88 ~~~adiIlkVk--~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~ 165 (405)
T 4dio_A 88 AKTADVILKVR--RPSAQEISGYRSGAVVIAIMDPYGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQ 165 (405)
T ss_dssp GGGCSEEEEEE--CCCTTTGGGSCTTCEEEEECCCTTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHH
T ss_pred hccCCEEEEeC--CCChhHHhhcCCCcEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHH
Confidence 55678777543 234555677765444443 33222322346678889988652 3211 1 23333321
Q ss_pred HHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc
Q 007040 124 ALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP 203 (620)
Q Consensus 124 aLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~ 203 (620)
+.+++.. .+.+....+..+...+.+.+|+|||+|.||..+|+.++++|++|++||+++...+....
T Consensus 166 Av~~aa~--------------~l~~~~~~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 166 AVIDAAY--------------EYDRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp HHHHHHH--------------HCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred HHHHHHH--------------HhHhhhchhhccCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 1111110 11111111112224578999999999999999999999999999999998753221111
Q ss_pred CCce-----------------e------------cCCHHhhhcCCcEEEEcc--cCChhhHhhcCHHHhhccCCCcEEEE
Q 007040 204 SAAR-----------------R------------MDTLNDLLAASDVISLHC--AVTDETIQIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 204 ~g~~-----------------~------------~~sL~eLL~~sDvVil~l--PlT~~T~~lI~~~~L~~MK~gAiLIN 252 (620)
.+.. + ..+|.++++.+|+||.++ |.. .+-.+|+++.++.||||++|||
T Consensus 232 ~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 232 LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVD 310 (405)
T ss_dssp TTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEE
T ss_pred cCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEE
Confidence 1111 0 236889999999999875 533 3567899999999999999999
Q ss_pred cC
Q 007040 253 TG 254 (620)
Q Consensus 253 vg 254 (620)
++
T Consensus 311 vA 312 (405)
T 4dio_A 311 LA 312 (405)
T ss_dssp TT
T ss_pred Ee
Confidence 97
No 70
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.02 E-value=3.4e-10 Score=114.50 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=88.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH--HH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA--EC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~--~~ 240 (620)
++|||||+|.||..+|+.|...|++|++|| +..........+.....++++++..+|+|++++|....+..++.. ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999 765443222235555678999999999999999987777777642 45
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
...+++|+++|+++.|...+.+.|.+.+...
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999999888888899988864
No 71
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.01 E-value=2.3e-10 Score=121.58 Aligned_cols=108 Identities=17% Similarity=0.207 Sum_probs=87.8
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhc-CCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLA-ASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~-~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|++|+|+|+|+||+.+|++|++||++|+++|++..........+... .++++++. .||+++.| .+.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~-v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTA-VALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEE-eChHHhhcCccceecHh-----HHHhhcC
Confidence 58999999999999999999999999999999998753211111123333 37788888 89999843 4788999
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
.+.++.|| ..++||.+++++.+++| .++|+++.|.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 78999999999999777 5888888765
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.01 E-value=7.5e-10 Score=113.79 Aligned_cols=120 Identities=14% Similarity=0.047 Sum_probs=87.5
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
.++||||| +|.||..+|..|+..|++|++||++.. .++.+++..||+|++++|... +..++. +.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-------------~~~~~~~~~aDvVilavp~~~-~~~vl~-~l 85 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-------------AVAESILANADVVIVSVPINL-TLETIE-RL 85 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-------------GGHHHHHTTCSEEEECSCGGG-HHHHHH-HH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-------------cCHHHHhcCCCEEEEeCCHHH-HHHHHH-HH
Confidence 46899999 999999999999999999999998652 257788999999999999664 666764 45
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCC-CCCccccCCCcEEEcCCC
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQ-WMEAWVREMPNVLILPRS 303 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~-~~~spL~~~pNVIlTPHi 303 (620)
...++++++++++++......+++.+.+. .. .+.. +|. .++.+++...+++++||.
T Consensus 86 ~~~l~~~~iv~~~~svk~~~~~~~~~~~~---~~--~v~~--hP~~g~~~~~~~g~~~~l~~~~ 142 (298)
T 2pv7_A 86 KPYLTENMLLADLTSVKREPLAKMLEVHT---GA--VLGL--HPMFGADIASMAKQVVVRCDGR 142 (298)
T ss_dssp GGGCCTTSEEEECCSCCHHHHHHHHHHCS---SE--EEEE--EECSCTTCSCCTTCEEEEEEEE
T ss_pred HhhcCCCcEEEECCCCCcHHHHHHHHhcC---CC--EEee--CCCCCCCchhhcCCeEEEecCC
Confidence 66799999999998877655555554431 11 2221 121 112245566689999974
No 73
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.01 E-value=5.9e-10 Score=122.86 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=93.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-----CceecCCHHhhhc---CCcEEEEcccCChhhH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-----AARRMDTLNDLLA---ASDVISLHCAVTDETI 233 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-----g~~~~~sL~eLL~---~sDvVil~lPlT~~T~ 233 (620)
.++|||||+|.||..||..|...|++|++||+++...+..... .+....+++++++ .+|+|++++|..+.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 3679999999999999999999999999999987543322111 1233568888887 4999999999988888
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
.++ .+.+..|++|.+|||++++...+...+.+.|.+..+.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~ 123 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGIL 123 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccc
Confidence 887 5678899999999999999999999999999887665
No 74
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.00 E-value=3.3e-10 Score=115.05 Aligned_cols=111 Identities=15% Similarity=0.185 Sum_probs=90.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC--HHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN--AEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~--~~~ 240 (620)
++|+|||+|.||..+|..|...|++|++||++..........+.....++++++..+|+|++++|....+..++. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 579999999999999999999999999999986443322223555567899999999999999998777777763 345
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
...+++|+++||++.|...+.+.|.+.+....+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677999999999999988788889998876433
No 75
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.00 E-value=3.1e-10 Score=115.03 Aligned_cols=108 Identities=13% Similarity=0.205 Sum_probs=87.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH--HH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA--EC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~--~~ 240 (620)
++|||||+|.||..+|+.|...|++|++||++..........++....++.+++..+|+|++++|....+..++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3699999999999999999999999999999875433222335555678999999999999999988777777643 25
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
+..+++|.++|+++.....+...+.+.+..
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999888887777777777765
No 76
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.99 E-value=4e-10 Score=114.54 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=89.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC--HHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN--AEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~--~~~ 240 (620)
++|||||+|.||..+|..|...|++|++||+++.........++....++++++..+|+|++++|....+..++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 579999999999999999999999999999986433322223555567899999999999999998877777774 356
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
...+++|.++|+++.|...+.+.|.+.+...
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 6779999999999999877788888888764
No 77
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.99 E-value=1.2e-09 Score=116.92 Aligned_cols=178 Identities=12% Similarity=0.140 Sum_probs=111.8
Q ss_pred ceEEEEecCCCCCHHHHhcCCCCeEEEEe-cccCCccchHHHHhcCcEEEEc---CCCC-h------HHHHHHHH--HHH
Q 007040 60 AAAVLLHSLAYLPRAAQRRLRPYQLILCL-GSSDRTVDSALAADLGLRLIHV---DTSR-A------EEIADTVM--ALL 126 (620)
Q Consensus 60 AdaVlv~s~~~l~~e~l~~lp~LK~I~~~-gaG~D~VD~~aa~erGI~VtNt---pg~~-a------~aVAE~aL--aLi 126 (620)
+|+|+.-. ..+++.++.++.=+++.+. --..+.--++++.++||...-- |... + .++||.+= +.+
T Consensus 85 adiIlkVk--~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~ 162 (381)
T 3p2y_A 85 ADVVVKVN--PPTSDEISQLKPGSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVL 162 (381)
T ss_dssp SSEEECSS--CCCHHHHTTSCTTCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC--CCChhHHhhccCCCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHH
Confidence 56655432 3566778888665554443 2222322346678889988662 3211 1 23333332 111
Q ss_pred HHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc
Q 007040 127 LGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA 206 (620)
Q Consensus 127 Lal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~ 206 (620)
++.. .-+...+ .+..+...+.+.+|+|||+|.||..+|+.|+++|++|++||+++...+.....|.
T Consensus 163 ~aa~-----------~l~~~~~---~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa 228 (381)
T 3p2y_A 163 LGAS-----------LSTRFVP---MLTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGA 228 (381)
T ss_dssp HHHH-----------HCSSCSS---CEECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTC
T ss_pred HHHH-----------Hhhhhhh---hhhcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 1111 0111111 1112234679999999999999999999999999999999998754321111222
Q ss_pred ee-------------------------cCCHHhhhcCCcEEEEcc--cCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 207 RR-------------------------MDTLNDLLAASDVISLHC--AVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 207 ~~-------------------------~~sL~eLL~~sDvVil~l--PlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.. ..++.++++.+|+||.++ |.. .+..+|+++.++.||||++|||++
T Consensus 229 ~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 229 QWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp EECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred eEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCc-ccceeecHHHHhcCCCCcEEEEEe
Confidence 11 235789999999999885 532 356789999999999999999996
No 78
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.97 E-value=8.4e-11 Score=123.36 Aligned_cols=136 Identities=15% Similarity=0.012 Sum_probs=93.8
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCC-CCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGK-GKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~-~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI 236 (620)
..+.+++|||||+|.||.++|..|+..|++|++|+++... .......|.... ++.++++.||+|++++|... ...++
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~ 89 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLY 89 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHH
Confidence 4578999999999999999999999999999999998643 121222344444 88899999999999999654 35666
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCC-CCCCCCc---cccC---CCcEEEcCCCC
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAE-GPQWMEA---WVRE---MPNVLILPRSA 304 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E-~P~~~~s---pL~~---~pNVIlTPHiA 304 (620)
..+....|++|++||+++ | +.. ....+ ..+..+||+. +|..+.+ .++. -.++++|||..
T Consensus 90 ~~~i~~~l~~~~ivi~~~-g--v~~--~~~~~----~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 90 KEEIEPNLKKGATLAFAH-G--FSI--HYNQV----VPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHHTGGGCCTTCEEEESC-C--HHH--HTTSS----CCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHHhhCCCCCEEEEcC-C--chh--HHHhh----cCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 545667899999999884 3 222 11111 1133455553 2433333 3444 66788999854
No 79
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.96 E-value=7.4e-10 Score=121.76 Aligned_cols=114 Identities=17% Similarity=0.179 Sum_probs=92.9
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC----CceecCCHHhhhcC---CcEEEEcccCChhh
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS----AARRMDTLNDLLAA---SDVISLHCAVTDET 232 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~----g~~~~~sL~eLL~~---sDvVil~lPlT~~T 232 (620)
...++|||||+|.||..||..|...|++|.+||+++...+..... ++....+++++++. +|+|++++|....+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 456789999999999999999999999999999986443322111 45566789998887 99999999988788
Q ss_pred HhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 233 IQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
..++. +....+++|.+|||++.|...+...+.+.|.+..+.
T Consensus 93 ~~vl~-~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAID-SLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHHH-HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 88884 567889999999999999988888898888875443
No 80
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.94 E-value=7.3e-10 Score=111.59 Aligned_cols=106 Identities=13% Similarity=0.111 Sum_probs=85.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQ 242 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~ 242 (620)
++|||||+|.||..+|..|.. |++|++||++..........+..... +.+++..+|+|++++|....+..++ .....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 469999999999999999999 99999999987443322112333344 7788899999999999776677766 45667
Q ss_pred ccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 243 HIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 243 ~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
.+++|.++|+++.+...+.+.|.+.+.+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 79999999999999888888899988874
No 81
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.93 E-value=1.3e-09 Score=119.84 Aligned_cols=146 Identities=15% Similarity=0.117 Sum_probs=99.9
Q ss_pred ecccCCccc-hHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEE
Q 007040 88 LGSSDRTVD-SALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLG 166 (620)
Q Consensus 88 ~gaG~D~VD-~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVG 166 (620)
+++|+..+. ........|+|+|+........-+...+.--.+...+. +. . ...+.|++++
T Consensus 209 TttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~---t-------------g~~L~GKtVv 269 (488)
T 3ond_A 209 TTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RA---T-------------DVMIAGKVAV 269 (488)
T ss_dssp SHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HH---H-------------CCCCTTCEEE
T ss_pred ccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHHHHH---HH---c-------------CCcccCCEEE
Confidence 345665442 12223568999999876555433322222111111110 00 0 1247999999
Q ss_pred EEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCC
Q 007040 167 IVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKP 246 (620)
Q Consensus 167 IIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~ 246 (620)
|+|+|.||+.+|++|+++|++|+++|+++.........+. ...++++++..+|+|+.+.. +.++|+.+.|..||+
T Consensus 270 VtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-dv~~lee~~~~aDvVi~atG----~~~vl~~e~l~~mk~ 344 (488)
T 3ond_A 270 VAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-QVLTLEDVVSEADIFVTTTG----NKDIIMLDHMKKMKN 344 (488)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCGGGTTTTCSEEEECSS----CSCSBCHHHHTTSCT
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-ccCCHHHHHHhcCEEEeCCC----ChhhhhHHHHHhcCC
Confidence 9999999999999999999999999997643322222333 34588999999999997643 567899999999999
Q ss_pred CcEEEEcCCCh
Q 007040 247 GAFLVNTGSSQ 257 (620)
Q Consensus 247 gAiLINvgRG~ 257 (620)
+++++|+|++.
T Consensus 345 gaiVvNaG~~~ 355 (488)
T 3ond_A 345 NAIVCNIGHFD 355 (488)
T ss_dssp TEEEEESSSTT
T ss_pred CeEEEEcCCCC
Confidence 99999999983
No 82
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.93 E-value=1.2e-09 Score=112.13 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=89.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH--HH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA--EC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~--~~ 240 (620)
++|||||+|.||..+|..|...|++|++||++..........+.....++.+++..+|+|++++|....+..++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6799999999999999999999999999999875443222234555668889999999999999977777776643 24
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
+..++++.++|+++.+.......|.+.+....+
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 577899999999999887778888888865433
No 83
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.9e-09 Score=119.08 Aligned_cols=111 Identities=12% Similarity=0.208 Sum_probs=92.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-----CCceecCCHHhhhcC---CcEEEEcccCChhhHh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-----SAARRMDTLNDLLAA---SDVISLHCAVTDETIQ 234 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-----~g~~~~~sL~eLL~~---sDvVil~lPlT~~T~~ 234 (620)
.+|||||+|.||..||..|...|++|.+||+++...+.... .++....++.++++. +|+|++++|....+..
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 90 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDA 90 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHH
Confidence 46999999999999999999999999999998754432222 345556789998877 9999999998888888
Q ss_pred hcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 235 IINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
++ ......+++|.+||+++.+...+...+.+.|.+..+.
T Consensus 91 vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 91 LI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 88 4577889999999999999988888898888775443
No 84
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.85 E-value=3e-09 Score=116.58 Aligned_cols=111 Identities=20% Similarity=0.250 Sum_probs=90.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC----CceecCCHHhhhcC---CcEEEEcccCChhhHhh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS----AARRMDTLNDLLAA---SDVISLHCAVTDETIQI 235 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~----g~~~~~sL~eLL~~---sDvVil~lPlT~~T~~l 235 (620)
++|||||+|.||+.+|..|...|++|.+||++.......... ++....++++++.. +|+|++++|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 579999999999999999999999999999986443311111 45556789998876 99999999988788887
Q ss_pred cCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 236 INAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+ .+....+++|.+||+++.|...+...+.+.+.+..+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 7 4566789999999999999888888888888765443
No 85
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.36 E-value=2.8e-10 Score=111.16 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=75.2
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHH
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAE 239 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~ 239 (620)
+.+++|||||+|.||+.+|+.|..+|++|++|+|+.. .......++... ++.++++.+|+|++++|.. .+..++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~--- 90 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA--- 90 (201)
Confidence 6788999999999999999999999999999999875 222222334333 7888999999999999975 566766
Q ss_pred HhhccCCCcEEEEcCCChhh
Q 007040 240 CLQHIKPGAFLVNTGSSQLL 259 (620)
Q Consensus 240 ~L~~MK~gAiLINvgRG~vV 259 (620)
.+..+++++++||+++|-..
T Consensus 91 ~l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 91 ELADSLKGRVLIDVSNNQKM 110 (201)
Confidence 24557789999999999753
No 86
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.85 E-value=4.7e-09 Score=115.24 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=90.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-----CCceecCCHHhhhc---CCcEEEEcccCChhhHh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-----SAARRMDTLNDLLA---ASDVISLHCAVTDETIQ 234 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-----~g~~~~~sL~eLL~---~sDvVil~lPlT~~T~~ 234 (620)
++|||||+|.||..+|..|...|++|.+||++......... .++....++++++. .+|+|++++|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 57999999999999999999999999999998754332211 34555678988874 89999999998878888
Q ss_pred hcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 235 IINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
++. .....+++|.+||+++.|...+...+.+.+.+..+.
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 874 566789999999999999888888888888775443
No 87
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.84 E-value=9.8e-10 Score=109.70 Aligned_cols=95 Identities=11% Similarity=0.158 Sum_probs=68.7
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCC--------------CCccc-cCCceecCCHHhhhcCCcEE
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGK--------------GKVTF-PSAARRMDTLNDLLAASDVI 222 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~--------------~~~~~-~~g~~~~~sL~eLL~~sDvV 222 (620)
.++.+++|||||+|.||..+|+.|...|++|++||+++.. ..... ..+.....++.+++++||+|
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvV 94 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELV 94 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEE
Confidence 5789999999999999999999999999999999998753 11001 11334456889999999999
Q ss_pred EEcccCChhhHhhcCHHH-hhccCCCcEEEEcCC
Q 007040 223 SLHCAVTDETIQIINAEC-LQHIKPGAFLVNTGS 255 (620)
Q Consensus 223 il~lPlT~~T~~lI~~~~-L~~MK~gAiLINvgR 255 (620)
++++|...... .+. +. ...+ +|.++|+++-
T Consensus 95 ilavp~~~~~~-~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 95 VNATEGASSIA-ALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EECSCGGGHHH-HHH-HHCHHHH-TTSEEEECCC
T ss_pred EEccCcHHHHH-HHH-Hhhhhhc-CCCEEEECCC
Confidence 99999765433 322 22 2334 8999999993
No 88
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.83 E-value=4.7e-09 Score=108.72 Aligned_cols=128 Identities=18% Similarity=0.117 Sum_probs=88.5
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-------CceecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-------AARRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-------g~~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
+.++|||||+|.||..||..|. .|++|++||+++...+..... ++....++.+ +++||+|+.++|...+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 6789999999999999999999 999999999987543322221 3444567876 889999999999998877
Q ss_pred hhcCHHHhhccCCCcEEE-EcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcCCC
Q 007040 234 QIINAECLQHIKPGAFLV-NTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILPRS 303 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLI-NvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTPHi 303 (620)
..+-.+ +..+ |+++|+ |+|.-.+ ..+.+++. ......++-.+. |++ .++-|.+.|+-
T Consensus 89 ~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~-Pv~------~~~lveiv~g~ 146 (293)
T 1zej_A 89 VEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN-PPH------VMPLVEIVISR 146 (293)
T ss_dssp HHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS-STT------TCCEEEEEECT
T ss_pred HHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC-ccc------cCCEEEEECCC
Confidence 765443 5667 999995 8877554 34444332 222334444444 322 45667777753
No 89
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.81 E-value=2.8e-09 Score=106.44 Aligned_cols=102 Identities=14% Similarity=0.049 Sum_probs=78.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCC--CCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVP--EGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~--~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
++|||||+|.||..+|..|...|++|++||+. ..........+.. .++.+++..+|+|++++|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999999999999873 2111111112333 57888999999999999987665554 456
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
+..+++ ++|+++.+...+.+.|.+.+..
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 667876 9999998887777888888765
No 90
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.80 E-value=1.5e-09 Score=109.38 Aligned_cols=158 Identities=13% Similarity=-0.015 Sum_probs=108.7
Q ss_pred CCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCC
Q 007040 70 YLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARHALSASGWLGS 149 (620)
Q Consensus 70 ~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~ 149 (620)
+++.+++..++.+.-++....|++.++. +.| +..|+|++. .+++.++.+. .
T Consensus 62 P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~-----~g~~~~l~~~------------~---- 112 (263)
T 2d5c_A 62 PLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA-----PGFLEALKAG------------G---- 112 (263)
T ss_dssp TCTTGGGGGCSEECHHHHHHTCCCEEEE----ETT----EEEEECCHH-----HHHHHHHHHT------------T----
T ss_pred cCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH-----HHHHHHHHHh------------C----
Confidence 6778888888887777777778888764 234 223455543 2444443310 0
Q ss_pred CCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccC
Q 007040 150 VQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 150 ~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.++.| +++|||+|.||+++|+.|..+|++|+++|++........ ..+.. ..+++++ .++|+|++++|.
T Consensus 113 --------~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~ 181 (263)
T 2d5c_A 113 --------IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRV 181 (263)
T ss_dssp --------CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSST
T ss_pred --------CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCC
Confidence 14688 999999999999999999999999999999864322111 11222 4578888 999999999998
Q ss_pred Ch--hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCC
Q 007040 229 TD--ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGT 272 (620)
Q Consensus 229 T~--~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~ 272 (620)
.. .+...+. +..+++|+++|+++.+.. +. .|.++++...
T Consensus 182 ~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g 222 (263)
T 2d5c_A 182 GLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKG 222 (263)
T ss_dssp TTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTT
T ss_pred CCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCc
Confidence 73 2334453 567899999999998743 33 4777766543
No 91
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.80 E-value=5.7e-09 Score=114.58 Aligned_cols=111 Identities=20% Similarity=0.224 Sum_probs=89.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-C-------ceecCCHHhhhc---CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-A-------ARRMDTLNDLLA---ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-g-------~~~~~sL~eLL~---~sDvVil~lPlT~~ 231 (620)
++|||||+|.||..+|..|...|++|.+||++.......... + +....++++++. .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 469999999999999999999999999999976432211111 2 445678888887 49999999998877
Q ss_pred hHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 232 TIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+..++ .+....+++|.+||+++.|...+...+.+.+.+..+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 88877 4566789999999999999888888888888875443
No 92
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.79 E-value=1.2e-08 Score=106.59 Aligned_cols=132 Identities=16% Similarity=0.082 Sum_probs=91.3
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cC--------------CceecCCHHhhh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PS--------------AARRMDTLNDLL 216 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~--------------g~~~~~sL~eLL 216 (620)
-++|||||+|.||..+|..+...|++|++||+++....... .. .+....++.+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999999864322110 01 124467899999
Q ss_pred cCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCc
Q 007040 217 AASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPN 296 (620)
Q Consensus 217 ~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pN 296 (620)
+.||+|+.++|...+.+.-+-.+....++++++|++.+.+ +....+.+.+.. .....++..+. |+. ..+-
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~-P~~------~~~l 155 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN-PPY------YIPL 155 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS-STT------TCCE
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC-chh------hcce
Confidence 9999999999988776654445677789999999866665 334456655532 22333444343 322 2345
Q ss_pred EEEcCCC
Q 007040 297 VLILPRS 303 (620)
Q Consensus 297 VIlTPHi 303 (620)
|.++|+-
T Consensus 156 veiv~g~ 162 (319)
T 2dpo_A 156 VELVPHP 162 (319)
T ss_dssp EEEEECT
T ss_pred EEEeCCC
Confidence 6677753
No 93
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.77 E-value=1.1e-08 Score=111.86 Aligned_cols=137 Identities=11% Similarity=0.136 Sum_probs=93.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--CCEEEEECCCCCCCCcc---------------cc----CCceecCCHHhhhcCCcE
Q 007040 163 LVLGIVGRSASARALATRSLSF--KMSVLYFDVPEGKGKVT---------------FP----SAARRMDTLNDLLAASDV 221 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~~---------------~~----~g~~~~~sL~eLL~~sDv 221 (620)
++|+|||+|.||..+|..|... |++|++||++....... .. .+.....++.++++.||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999987 89999999975322210 00 133445678888999999
Q ss_pred EEEcccCChhhHhh-----------c--CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCC-
Q 007040 222 ISLHCAVTDETIQI-----------I--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWM- 287 (620)
Q Consensus 222 Vil~lPlT~~T~~l-----------I--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~- 287 (620)
|++|+|......+. . -......|++|+++|++++..+-..+.+.+.|.+....+....|...|...
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~ 165 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLA 165 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhh
Confidence 99999965433221 1 123556789999999999988877888888887754322222233333221
Q ss_pred -C---ccccCCCcEEE
Q 007040 288 -E---AWVREMPNVLI 299 (620)
Q Consensus 288 -~---spL~~~pNVIl 299 (620)
. +.+...++|++
T Consensus 166 ~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 166 EGTAIKDLKNPDRVLI 181 (467)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred cccchhhccCCCEEEE
Confidence 1 13455666764
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.71 E-value=4.9e-09 Score=104.91 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=77.9
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCE-EEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCChhhHhhc
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMS-VLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~-V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI 236 (620)
++.+++|||||+|.||..+|..|...|++ |.+||++......... .++....++++++.++|+|++++|.. ....++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~ 85 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL 85 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH
Confidence 35678999999999999999999988998 9999998643321111 14455678889999999999999966 345555
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcH
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDD 261 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe 261 (620)
......+++++++|+++.|-..+.
T Consensus 86 -~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 86 -QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp -HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred -HHHHhhcCCCcEEEECCCCCchHH
Confidence 345567889999999999876543
No 95
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.69 E-value=5.8e-09 Score=114.63 Aligned_cols=97 Identities=13% Similarity=0.162 Sum_probs=74.1
Q ss_pred eeecC-cEEEEEeCChhhHHHHHHHhhC------CCEEEEECCCCC-CCCccccCCcee----cCCHHhhhcCCcEEEEc
Q 007040 158 RRCRG-LVLGIVGRSASARALATRSLSF------KMSVLYFDVPEG-KGKVTFPSAARR----MDTLNDLLAASDVISLH 225 (620)
Q Consensus 158 ~~L~G-ktVGIIGlG~IG~~vA~~Lkaf------G~~V~~~dr~~~-~~~~~~~~g~~~----~~sL~eLL~~sDvVil~ 225 (620)
..|.| ++|||||+|.||.++|+.|+.. |++|++.++... ....+...|+.. ..++.+++++||+|+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILa 128 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLL 128 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEEC
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEEC
Confidence 46899 9999999999999999999988 999886665432 222222344442 25789999999999999
Q ss_pred ccCChhhHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 226 CAVTDETIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 226 lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
+|..... .++. +.+..||+|++| -.+-|-
T Consensus 129 VP~~~~~-eVl~-eI~p~LK~GaIL-s~AaGf 157 (525)
T 3fr7_A 129 ISDAAQA-DNYE-KIFSHMKPNSIL-GLSHGF 157 (525)
T ss_dssp SCHHHHH-HHHH-HHHHHSCTTCEE-EESSSH
T ss_pred CChHHHH-HHHH-HHHHhcCCCCeE-EEeCCC
Confidence 9987654 4665 688999999994 566663
No 96
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.65 E-value=3.3e-08 Score=96.58 Aligned_cols=80 Identities=11% Similarity=0.212 Sum_probs=63.7
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
.++.+++|+|||+|.||..+|..|...|++|++||++.. .+++||+|++++| ...+..++.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~~ 75 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALAK 75 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHHH
Confidence 457899999999999999999999999999999998753 5578999999999 666777664
Q ss_pred HHHhhccCCCcEEEEcCCChh
Q 007040 238 AECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~v 258 (620)
+....++ ++++|++++|--
T Consensus 76 -~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 76 -QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp -HTHHHHT-TSEEEECCCCBC
T ss_pred -HHHHhcC-CCEEEEECCCCC
Confidence 3445677 999999999654
No 97
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.63 E-value=1.1e-07 Score=104.35 Aligned_cols=140 Identities=16% Similarity=0.045 Sum_probs=93.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCC--------ccccC-------------CceecCCHHhhhcCCcE
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGK--------VTFPS-------------AARRMDTLNDLLAASDV 221 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~--------~~~~~-------------g~~~~~sL~eLL~~sDv 221 (620)
++|||||+|.||..||..+...|++|++||++..... ..... .+....+++ .+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCE
Confidence 6899999999999999999999999999999875110 00011 123356775 6889999
Q ss_pred EEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEEcC
Q 007040 222 ISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLILP 301 (620)
Q Consensus 222 Vil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIlTP 301 (620)
||.++|...+.+.-+-.+....++++++|+..+.+ +....+.+.+.. ....+++..|. |++ .++-|.|.|
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn-Pv~------~m~LvEIv~ 203 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN-PAN------VIRLVEIIY 203 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS-STT------TCCEEEEEC
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc-hhh------hCCEEEEEe
Confidence 99999988877665546677789999999644333 333455555432 33456666666 322 345567777
Q ss_pred CCCCCcHHHHHHH
Q 007040 302 RSADYSEEVWMEI 314 (620)
Q Consensus 302 HiAg~T~ea~~~~ 314 (620)
+-. .++++.+.+
T Consensus 204 g~~-Ts~e~~~~~ 215 (460)
T 3k6j_A 204 GSH-TSSQAIATA 215 (460)
T ss_dssp CSS-CCHHHHHHH
T ss_pred CCC-CCHHHHHHH
Confidence 532 344444443
No 98
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.63 E-value=7.8e-08 Score=103.98 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=79.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-------------------CC-ceecCCHHhhhcCCcEE
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-------------------SA-ARRMDTLNDLLAASDVI 222 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-------------------~g-~~~~~sL~eLL~~sDvV 222 (620)
++|+|||+|.||..+|..|...|++|++||+++........ .+ .....++.++++.||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 47999999999999999999999999999997532221000 12 34456788889999999
Q ss_pred EEcccCChh---------hHhhcCHHHhhccCC---CcEEEEcCCChhhc-HHHHHHHHHc
Q 007040 223 SLHCAVTDE---------TIQIINAECLQHIKP---GAFLVNTGSSQLLD-DCAVKQLLID 270 (620)
Q Consensus 223 il~lPlT~~---------T~~lI~~~~L~~MK~---gAiLINvgRG~vVD-e~AL~~AL~~ 270 (620)
++++|.... +...+ ......|++ ++++|+.+...+-. .+.+.+.|..
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999996654 34433 345556888 99999998766655 5667777765
No 99
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.61 E-value=2e-08 Score=98.40 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=71.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
.+++|+|||+|.||+.+|+.|...|++|+++|++..........++... ++.+++..+|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 4578999999999999999999999999999998643322222244333 788899999999999995 34555553
Q ss_pred hhccCCCcEEEEcCCChhhc
Q 007040 241 LQHIKPGAFLVNTGSSQLLD 260 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVD 260 (620)
+..+.+++++|++++|-..+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 44334899999999987554
No 100
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.59 E-value=2.3e-08 Score=101.48 Aligned_cols=93 Identities=8% Similarity=0.110 Sum_probs=72.1
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
++|||||+ |.||..+|+.|...|++|++||++..........++.. .++.+++..+|+|++++|... +..++ .+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-TDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-CCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-CCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 58999999 99999999999999999999999864332111123322 367788999999999999654 55665 3556
Q ss_pred hccCCCcEEEEcCCChh
Q 007040 242 QHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 242 ~~MK~gAiLINvgRG~v 258 (620)
..+++++++|+++.|..
T Consensus 89 ~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 89 PRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGSCTTCEEEESCSHHH
T ss_pred HhCCCCCEEEECCCCch
Confidence 67899999999888763
No 101
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.59 E-value=5.3e-08 Score=99.06 Aligned_cols=154 Identities=13% Similarity=0.050 Sum_probs=101.5
Q ss_pred ceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEcCCCChHHHHHHHHHHHHHHHhccHHHHHH
Q 007040 60 AAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHVDTSRAEEIADTVMALLLGLLRRTHLLARH 139 (620)
Q Consensus 60 AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNtpg~~a~aVAE~aLaLiLal~Rrl~~~~~~ 139 (620)
.+.+.++ .++..+++..+..+.-++....+++.++. +.|- ..|+|++.. +++.++.+ .
T Consensus 66 ~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~----~~g~nTd~~-----G~~~~l~~-------~ 123 (275)
T 2hk9_A 66 VKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-----GFLKSLKS-------L 123 (275)
T ss_dssp CCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTE----EEEECCHHH-----HHHHHHHH-------H
T ss_pred CCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCE----EEeecCCHH-----HHHHHHHH-------h
Confidence 4466555 35667777777766555554556665543 2342 234455332 33333321 0
Q ss_pred HHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCceecCCHHhhhcC
Q 007040 140 ALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAARRMDTLNDLLAA 218 (620)
Q Consensus 140 ~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~ 218 (620)
. ..+.|++++|||.|.||+++|..|...|++|++|||+........ ..++....++.+++++
T Consensus 124 -----~------------~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 124 -----I------------PEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDK 186 (275)
T ss_dssp -----C------------TTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGG
T ss_pred -----C------------CCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcC
Confidence 0 136789999999999999999999999999999999864322111 1133444478889999
Q ss_pred CcEEEEcccCChh--hHhhcCHHHhhccCCCcEEEEcCC
Q 007040 219 SDVISLHCAVTDE--TIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 219 sDvVil~lPlT~~--T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
+|+|++++|.... +...++ +..+++|+++++++.
T Consensus 187 aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 9999999997642 223443 466899999999988
No 102
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.58 E-value=2.2e-08 Score=106.63 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=81.7
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-CCceecCCHHhhhc-CCcEEEEcccCChhhHhhc
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-SAARRMDTLNDLLA-ASDVISLHCAVTDETIQII 236 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~-~sDvVil~lPlT~~T~~lI 236 (620)
+|.|++|+|+|+|+||+.+|+.|.++|++|+++|++......... .+... .+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~-v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-VAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-CCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-EChHHHhccCCcEeeccc-----hHHHh
Confidence 489999999999999999999999999999999987633221111 13333 36677776 899999774 56688
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
+.+.++.|+ ..++++.+++++.+++ +.+.|+++.+
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 888888884 6799999999988755 4566666655
No 103
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.57 E-value=2e-07 Score=95.47 Aligned_cols=131 Identities=9% Similarity=0.002 Sum_probs=85.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-----------ccC------------------CceecCCHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT-----------FPS------------------AARRMDTLN 213 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-----------~~~------------------g~~~~~sL~ 213 (620)
++|+|||+|.||..||..|...|++|++||++....+.. ... .+....++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 579999999999999999999999999999986432210 000 123356788
Q ss_pred hhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccC
Q 007040 214 DLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVRE 293 (620)
Q Consensus 214 eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~ 293 (620)
+.++.||+|++++|...+...-+-.+....++++++|+....+- ....+.+.+.. .-..+++..+. |.. .
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~-~~~~~g~h~~~-P~~------~ 165 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTR-QDRFAGLHFFN-PVP------V 165 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEEECS-STT------T
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCC-cccEEEEecCC-Ccc------c
Confidence 88999999999999876654444345556789999998554443 23345444432 11223444443 322 3
Q ss_pred CCcEEEcCCC
Q 007040 294 MPNVLILPRS 303 (620)
Q Consensus 294 ~pNVIlTPHi 303 (620)
.+.+.+.++-
T Consensus 166 ~~~~~i~~g~ 175 (302)
T 1f0y_A 166 MKLVEVIKTP 175 (302)
T ss_dssp CCEEEEECCT
T ss_pred CceEEEeCCC
Confidence 4566666643
No 104
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.55 E-value=3.7e-08 Score=89.97 Aligned_cols=89 Identities=16% Similarity=0.234 Sum_probs=69.3
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCc---cccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKV---TFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~---~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
|++|+|||.|.||+.+++.|..+|++|+++|++...... .+........++.+++..+|+|++++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 889999999999999999999999999999998644321 11111234568999999999999999976 234554
Q ss_pred HHhhccCCCcEEEEcCCC
Q 007040 239 ECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG 256 (620)
..+++|.++||++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 557889999998764
No 105
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.54 E-value=1.7e-07 Score=99.03 Aligned_cols=240 Identities=13% Similarity=0.110 Sum_probs=136.4
Q ss_pred cceEEEEecCCCCCHHHHhcCCCCeEEEEecccCCccchHHHHhcCcEEEEc---CCCC-----hHHHHHHHH--HHHHH
Q 007040 59 AAAAVLLHSLAYLPRAAQRRLRPYQLILCLGSSDRTVDSALAADLGLRLIHV---DTSR-----AEEIADTVM--ALLLG 128 (620)
Q Consensus 59 ~AdaVlv~s~~~l~~e~l~~lp~LK~I~~~gaG~D~VD~~aa~erGI~VtNt---pg~~-----a~aVAE~aL--aLiLa 128 (620)
++|+|+... .+...+.....+.+.++.......+.-.++.+.+.||...|. |.-. -.++++.+- +.+++
T Consensus 66 ~ad~i~~vk-sP~~~~~~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~g 144 (361)
T 1pjc_A 66 SREMVVKVK-EPLPAEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFG 144 (361)
T ss_dssp TSSEEECSS-CCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEC-CCCHHHHHhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHH
Confidence 677766432 233333323334555555544444444466678889988874 4221 245555444 44444
Q ss_pred HHhccHHHHHHHHHhCC-CCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce
Q 007040 129 LLRRTHLLARHALSASG-WLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR 207 (620)
Q Consensus 129 l~Rrl~~~~~~~~~~g~-W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~ 207 (620)
... +... ..+. +. . .+...+.+++|+|+|.|.+|+.+++.|+.+|++|+++|++....+.....+..
T Consensus 145 A~n-t~~~-----~~g~G~~--l----~~l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~ 212 (361)
T 1pjc_A 145 ARF-LERQ-----QGGRGVL--L----GGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS 212 (361)
T ss_dssp HHH-TSGG-----GTSCCCC--T----TCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG
T ss_pred HHH-Hhhc-----cCCCcee--c----cCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc
Confidence 432 1110 1111 11 0 11124678999999999999999999999999999999986433211111110
Q ss_pred -------ecCCHHhhhcCCcEEEEcccCCh-hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEee
Q 007040 208 -------RMDTLNDLLAASDVISLHCAVTD-ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALD 279 (620)
Q Consensus 208 -------~~~sL~eLL~~sDvVil~lPlT~-~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLD 279 (620)
...++.+.+..+|+|+.+++... .+..++..+.++.|++|.++||++-.. .|.+ +
T Consensus 213 ~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~------------gg~~-----e 275 (361)
T 1pjc_A 213 RVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ------------GGCV-----E 275 (361)
T ss_dssp GSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT------------CCSB-----T
T ss_pred eeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC------------CCCC-----c
Confidence 11246677789999999997543 234556788899999999999997521 0111 1
Q ss_pred cCCCCCCCCccccCCCcEE--EcCCCCCCcHH-HHHHHHHHHHHHHHHHHHcC
Q 007040 280 GAEGPQWMEAWVREMPNVL--ILPRSADYSEE-VWMEIRDKAISVLQTFFFDG 329 (620)
Q Consensus 280 V~E~P~~~~spL~~~pNVI--lTPHiAg~T~e-a~~~~~~~a~enL~~~L~~G 329 (620)
.. .|...+.+.+...++. ..+++.+.... +...+.+..+..+..++..|
T Consensus 276 ~~-~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~~~G 327 (361)
T 1pjc_A 276 TL-HPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQG 327 (361)
T ss_dssp TC-CCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred cc-cCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 11 1222233334344544 34555555433 33444455666677766555
No 106
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.52 E-value=7.3e-08 Score=100.01 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=79.3
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCC----CEEEEECCCCC--CCCccccCCceecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFK----MSVLYFDVPEG--KGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG----~~V~~~dr~~~--~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
...++|||||+|.||..+|..|...| ++|++||++.. ........|+....+..+++..+|+|++++| ...+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 34568999999999999999999989 79999999874 2222222355556688899999999999999 45566
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
.++. +....++++.++|+++-|-- ...|.+.+..
T Consensus 99 ~vl~-~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FILD-EIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHHH-HHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHHH-HHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 6653 45567889999999976532 3456666654
No 107
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.50 E-value=7e-08 Score=96.11 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=74.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
++|||||+|.||+.+|+.|...|+.|.+||+++........ .++....++++++..+|+|++++| ...... .+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~-----v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFET-----VL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHH-----HH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHH-----HH
Confidence 47999999999999999999999999999998643321111 144455689999999999999999 444433 34
Q ss_pred hccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 242 QHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 242 ~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
..+++|.++|++..|-- .+.+.+.+..
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~ 104 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQ 104 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCC
Confidence 45668999999976543 3456666553
No 108
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.49 E-value=2.1e-07 Score=101.26 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=82.7
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc------------------cCCceecCCHHhhhcCC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF------------------PSAARRMDTLNDLLAAS 219 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~------------------~~g~~~~~sL~eLL~~s 219 (620)
++..-++|+|||+|.||..+|..|.. |++|++||+++...+... ..+.....++.++++.|
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 44566799999999999999999988 999999999864322100 01234556888999999
Q ss_pred cEEEEcccCChh-------hHhhc--CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 220 DVISLHCAVTDE-------TIQII--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 220 DvVil~lPlT~~-------T~~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
|+|++++|...+ +..+. -..... |++|+++|+.+...+-..+.+.+.+...
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 999999996521 11222 134556 9999999999998888888888888764
No 109
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.47 E-value=6.5e-08 Score=96.28 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=72.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC-CEEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFK-MSVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
++|||||+|.||..+|..|...| ++|++||+++........ .+.....++.+++ .+|+|++++| ......++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~-- 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN-- 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--
Confidence 47999999999999999999889 999999998643332111 2455556777888 9999999999 5555555431
Q ss_pred hhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
+.. + +.++|+++.|--. +.|.+.+..
T Consensus 77 l~~-~-~~ivv~~~~g~~~--~~l~~~~~~ 102 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLSV--GTLSRYLGG 102 (263)
T ss_dssp CCC-T-TCEEEECCTTCCH--HHHHHHTTS
T ss_pred hcc-C-CCEEEEecCCCCH--HHHHHHcCC
Confidence 222 4 8999999655332 566666655
No 110
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.46 E-value=7.7e-08 Score=95.70 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=76.4
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC----EEEEECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKM----SVLYFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~----~V~~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++|||||+|.||..+|+.|...|+ +|++||+++....... ..++....++.+++.++|+|++++|.. ....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~-~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD-LYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT-THHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH-HHHHHH-
Confidence 579999999999999999999998 9999999875433221 135566678999999999999999743 445555
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
.+....++++.++|.+.-|- ..+.|.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 34556788999999776553 34456565543
No 111
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.44 E-value=7e-07 Score=97.44 Aligned_cols=107 Identities=9% Similarity=0.132 Sum_probs=81.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc--------------------CCceecCCHHhhhcCCcEE
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP--------------------SAARRMDTLNDLLAASDVI 222 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~--------------------~g~~~~~sL~eLL~~sDvV 222 (620)
-+|+|||+|.||..+|..|...|++|++||+++...+.... .......++.+.++.||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 35999999999999999999999999999998754331111 1134457898999999999
Q ss_pred EEcccCChh----------hHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 223 SLHCAVTDE----------TIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 223 il~lPlT~~----------T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
++|+|.... .+..+ ......|++|+++|+.+.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999886532 33333 456778999999999997666566667776665
No 112
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.41 E-value=2.1e-07 Score=94.94 Aligned_cols=105 Identities=9% Similarity=0.029 Sum_probs=78.9
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC---EEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM---SVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~---~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
.++|||||+|+||..+|..|...|+ +|++||++......... .++....++.+++..+|+|++++|. .....++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4689999999999999999999998 89999998754432222 2566667889999999999999984 34445553
Q ss_pred HHHhhc-cCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 238 AECLQH-IKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 238 ~~~L~~-MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
+.-.. ++++.++|++.-|- ....|.+.+..
T Consensus 82 -~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 82 -ELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp -HHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred -HHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 34444 78888999887664 34567677654
No 113
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.41 E-value=5e-07 Score=96.93 Aligned_cols=132 Identities=9% Similarity=0.012 Sum_probs=87.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC------------------CceecCCHHhhhcCCcEEEE
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS------------------AARRMDTLNDLLAASDVISL 224 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~------------------g~~~~~sL~eLL~~sDvVil 224 (620)
++|+|||+|.||..+|..|.. |++|++||++.......... ......++.+.+..||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999999 99999999976332211101 11334567788889999999
Q ss_pred cccCCh----------hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCC--CCCCCCcccc
Q 007040 225 HCAVTD----------ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAE--GPQWMEAWVR 292 (620)
Q Consensus 225 ~lPlT~----------~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E--~P~~~~spL~ 292 (620)
++|... .+...+ ..... +++++++|+.+.-.+-..+.+.+.+.... .++..+ .|-.....+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~----v~~~Pe~~~~G~a~~~~~ 153 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDR----IIFSPEFLRESKALYDNL 153 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSC----EEECCCCCCTTSTTHHHH
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCe----EEECCccccCcchhhccc
Confidence 999763 244444 33455 89999999977766666677777665432 222222 1322333445
Q ss_pred CCCcEEEcC
Q 007040 293 EMPNVLILP 301 (620)
Q Consensus 293 ~~pNVIlTP 301 (620)
..+.+++-.
T Consensus 154 ~~~riviG~ 162 (402)
T 1dlj_A 154 YPSRIIVSC 162 (402)
T ss_dssp SCSCEEEEC
T ss_pred CCCEEEEeC
Confidence 556676543
No 114
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.40 E-value=4.8e-07 Score=98.70 Aligned_cols=107 Identities=11% Similarity=0.108 Sum_probs=79.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-------c-------------cCCceecCCHHhhhcCCcEE
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT-------F-------------PSAARRMDTLNDLLAASDVI 222 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-------~-------------~~g~~~~~sL~eLL~~sDvV 222 (620)
++|+|||+|.||..+|..|...|++|++||++....... + ........++.++++.||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 589999999999999999999999999999986322100 0 11234456889999999999
Q ss_pred EEcccCCh---------hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 223 SLHCAVTD---------ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 223 il~lPlT~---------~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
++++|... .....+ ......+++|.++|+.+.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999653 333443 456677999999999997555555566666654
No 115
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.39 E-value=7.7e-07 Score=97.72 Aligned_cols=107 Identities=10% Similarity=0.017 Sum_probs=77.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--CCEEEEECCCCCCCCccc-------c------------CCceecCCHHhhhcCCcE
Q 007040 163 LVLGIVGRSASARALATRSLSF--KMSVLYFDVPEGKGKVTF-------P------------SAARRMDTLNDLLAASDV 221 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~~~-------~------------~g~~~~~sL~eLL~~sDv 221 (620)
++|+|||+|.||..+|..|... |++|++||++....+... . .+.....++.+.++.||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 799999998753221100 0 122344567788899999
Q ss_pred EEEcccCChh--------------hHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 222 ISLHCAVTDE--------------TIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 222 Vil~lPlT~~--------------T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
|++++|.... +...+ ......+++|+++|+.+.-.+-..+.+.+.|.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999986432 22222 345677999999999887666556667777776
No 116
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.39 E-value=4.9e-07 Score=99.58 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=88.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cCC-------------ceecCCHHhhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PSA-------------ARRMDTLNDLLAA 218 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~sL~eLL~~ 218 (620)
++|||||+|.||..||..+...|++|++||++........ ..+ +....+++ .+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 84 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALAA 84 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-HhcC
Confidence 5799999999999999999999999999999874332110 111 22345675 6889
Q ss_pred CcEEEEcccCChhhHhhcCHHHhhccCCCcEE-EEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcE
Q 007040 219 SDVISLHCAVTDETIQIINAECLQHIKPGAFL-VNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNV 297 (620)
Q Consensus 219 sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiL-INvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNV 297 (620)
||+||.++|...+.+.-+-.+....++++++| .|++.-.+ ..|.+.+.. ....+++..|.+++. ++-+
T Consensus 85 aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~-p~~~ig~hf~~Pa~v-------~~Lv 153 (483)
T 3mog_A 85 ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKN-PERVAGLHFFNPAPV-------MKLV 153 (483)
T ss_dssp CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSS-GGGEEEEEECSSTTT-------CCEE
T ss_pred CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccC-ccceEEeeecChhhh-------CCeE
Confidence 99999999988776654445677789999999 46776543 345544432 334456666654322 2456
Q ss_pred EEcCCC
Q 007040 298 LILPRS 303 (620)
Q Consensus 298 IlTPHi 303 (620)
.+.|+-
T Consensus 154 evv~g~ 159 (483)
T 3mog_A 154 EVVSGL 159 (483)
T ss_dssp EEEECS
T ss_pred EEecCC
Confidence 666643
No 117
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.38 E-value=4.3e-07 Score=90.30 Aligned_cols=98 Identities=15% Similarity=0.244 Sum_probs=70.5
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCC----CEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGRSASARALATRSLSFK----MSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG----~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
.++|||||+|.||..+|..|...| ++|++||++... .++....++.+++..+|+|++++|. ..+..++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~~ 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVLN 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHHH
Confidence 468999999999999999999888 799999998754 3455566888999999999999994 45555553
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
+....++ +.++|....| ++.+.+.+.+..
T Consensus 77 -~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~ 105 (262)
T 2rcy_A 77 -NIKPYLS-SKLLISICGG--LNIGKLEEMVGS 105 (262)
T ss_dssp -HSGGGCT-TCEEEECCSS--CCHHHHHHHHCT
T ss_pred -HHHHhcC-CCEEEEECCC--CCHHHHHHHhCC
Confidence 3445564 4555554443 233456565544
No 118
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.37 E-value=2.2e-07 Score=96.38 Aligned_cols=92 Identities=22% Similarity=0.257 Sum_probs=71.2
Q ss_pred cCcEEEEEeCChhhHHHHHHHhh-CCC-EEEEECCCCCCCCcccc-CC--ceecCCHHhhhcCCcEEEEcccCChhhHhh
Q 007040 161 RGLVLGIVGRSASARALATRSLS-FKM-SVLYFDVPEGKGKVTFP-SA--ARRMDTLNDLLAASDVISLHCAVTDETIQI 235 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~Lka-fG~-~V~~~dr~~~~~~~~~~-~g--~~~~~sL~eLL~~sDvVil~lPlT~~T~~l 235 (620)
..++|||||+|.||+.+++.|.. +|+ +|.+||++......... .+ +....+++++++.+|+|++++|.. ..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Ccc
Confidence 56789999999999999999875 487 99999998644331111 12 445678999999999999999953 456
Q ss_pred cCHHHhhccCCCcEEEEcCCChh
Q 007040 236 INAECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~v 258 (620)
+.. ..+++|.++++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 654 57899999999986654
No 119
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.35 E-value=1.6e-06 Score=94.85 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=85.9
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc----------------------CCceecCCHHhhhcCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP----------------------SAARRMDTLNDLLAAS 219 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~----------------------~g~~~~~sL~eLL~~s 219 (620)
-++|||||+|.||..||..|...|++|++||++......... .......++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 357999999999999999999999999999997632221000 001123466 567899
Q ss_pred cEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEE
Q 007040 220 DVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLI 299 (620)
Q Consensus 220 DvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIl 299 (620)
|+|+.++|...+.+.-+-.+....++++++|+....+- ....|.+.+.. .-..+++..| .|.+ .++.|.+
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~-~~~~ig~hf~-~P~~------~~~lvev 185 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDR-PQLVIGTHFF-SPAH------VMRLLEV 185 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEEEC-SSTT------TCCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcC-CcceEEeecC-CCcc------cceeEEE
Confidence 99999999876544444345666789999999744332 23356655532 2223455555 3432 3455666
Q ss_pred cCCCCC
Q 007040 300 LPRSAD 305 (620)
Q Consensus 300 TPHiAg 305 (620)
.++..+
T Consensus 186 v~g~~t 191 (463)
T 1zcj_A 186 IPSRYS 191 (463)
T ss_dssp EECSSC
T ss_pred eCCCCC
Confidence 665443
No 120
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.32 E-value=1.4e-06 Score=95.89 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=76.1
Q ss_pred CcEEEEEeCChhhHHHHHHHhhC-CC-EEEEECCCCC----CCCcc---------cc------------CC-ceecCCHH
Q 007040 162 GLVLGIVGRSASARALATRSLSF-KM-SVLYFDVPEG----KGKVT---------FP------------SA-ARRMDTLN 213 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~Lkaf-G~-~V~~~dr~~~----~~~~~---------~~------------~g-~~~~~sL~ 213 (620)
-++|+|||+|.||..+|..|... |+ +|++||++.. ..+.. +. .+ .....+ .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-F 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-H
Confidence 35899999999999999999999 99 9999999876 21100 00 12 223344 5
Q ss_pred hhhcCCcEEEEcccCC--------hhhHhhc--CHHHhhccCCCcEEEEcCCChhhcHHHHHH
Q 007040 214 DLLAASDVISLHCAVT--------DETIQII--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQ 266 (620)
Q Consensus 214 eLL~~sDvVil~lPlT--------~~T~~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~ 266 (620)
+.++.||+|++++|.. +++..+. -......+++|+++|+.+.-.+-..+.+.+
T Consensus 97 ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 97 SRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 7889999999999975 2333333 245677899999999999877666666655
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.30 E-value=8.3e-07 Score=91.79 Aligned_cols=105 Identities=16% Similarity=0.152 Sum_probs=74.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-C-------------c-eecCCHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-A-------------A-RRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-g-------------~-~~~~sL~eLL~~sDvVil~lP 227 (620)
++|+|||+|.||..+|..|...|++|.+||+++......... + . ....++++++..+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 689999999999999999999999999999975332211000 0 0 234678888899999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
... +..++ ......+++++++|++ -|.......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 664 34555 4556678999999998 3312233335555554
No 122
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.29 E-value=5.6e-07 Score=92.36 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=73.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECC--CCCCCCccccCC-----------ceecC--CHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDV--PEGKGKVTFPSA-----------ARRMD--TLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr--~~~~~~~~~~~g-----------~~~~~--sL~eLL~~sDvVil~lP 227 (620)
++|+|||+|.||..+|..|...|++|++|++ +..........+ ..... ++.+++..+|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999999999999999 643221111111 12333 67788899999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCCh---h-hcHHHHHHHHHc
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQ---L-LDDCAVKQLLID 270 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~---v-VDe~AL~~AL~~ 270 (620)
.. .+..++. .... +++++++|+++.|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~~-~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVMS-RILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHHH-HHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHHH-HHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 65 4555553 4455 88999999998764 1 122345555544
No 123
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.29 E-value=1.7e-06 Score=79.91 Aligned_cols=103 Identities=14% Similarity=0.181 Sum_probs=79.6
Q ss_pred ecCcEEEEEeC----ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhh
Q 007040 160 CRGLVLGIVGR----SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQI 235 (620)
Q Consensus 160 L~GktVGIIGl----G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~l 235 (620)
..-++|+|||+ |.+|..+++.|...|++|+.+|+.... . .|...+.++.++....|++++++| .+....+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i-~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v 85 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----I-EGLKCYRSVRELPKDVDVIVFVVP-PKVGLQV 85 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----E-TTEECBSSGGGSCTTCCEEEECSC-HHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----E-CCeeecCCHHHhCCCCCEEEEEeC-HHHHHHH
Confidence 46678999999 999999999999999999999887522 1 466667899999999999999999 5666677
Q ss_pred cCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 236 INAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+. +.++ +..++++++++. ..+++.+++++..+.
T Consensus 86 ~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 86 AK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 64 3444 666788887754 257788887776665
No 124
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.27 E-value=1.2e-06 Score=96.18 Aligned_cols=107 Identities=12% Similarity=0.117 Sum_probs=76.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCc-------cccCC-------------ceecCCHHhhhcCCcE
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKV-------TFPSA-------------ARRMDTLNDLLAASDV 221 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~-------~~~~g-------------~~~~~sL~eLL~~sDv 221 (620)
.++|+|||+|.||..+|..|...|++|++||++....+. .+..+ .....++.+.++.||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 468999999999999999999999999999997532210 01111 2345678788899999
Q ss_pred EEEcccCC---------hhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHH
Q 007040 222 ISLHCAVT---------DETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLI 269 (620)
Q Consensus 222 Vil~lPlT---------~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~ 269 (620)
|++++|.. ......+ ......+++++++|+.+...+-..+.+.+.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999963 3344444 34566799999999998543433444544444
No 125
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.26 E-value=1.5e-06 Score=86.97 Aligned_cols=91 Identities=10% Similarity=-0.002 Sum_probs=67.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC---Cc-----eecCCHHhhhcCCcEEEEcccCChhhHh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS---AA-----RRMDTLNDLLAASDVISLHCAVTDETIQ 234 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~---g~-----~~~~sL~eLL~~sDvVil~lPlT~~T~~ 234 (620)
++|+|||+|.||..+|..|...|++|++|+++.......... +. ....+ .+.+..+|+|++++|.. .+..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~-~~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAW-QVSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGG-GHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHH-hHHH
Confidence 479999999999999999999999999999987543311111 11 11233 46778999999999965 4555
Q ss_pred hcCHHHhhccCCCcEEEEcCCC
Q 007040 235 IINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgRG 256 (620)
++ ......+++++++|++.-|
T Consensus 79 v~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 79 AV-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp HH-HHHHTTSCTTSCEEEECSS
T ss_pred HH-HHHHhhCCCCCEEEEecCC
Confidence 55 3455678899999998665
No 126
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.25 E-value=1.5e-06 Score=99.90 Aligned_cols=139 Identities=16% Similarity=0.102 Sum_probs=89.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-----------ccCC-------------ceecCCHHhhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT-----------FPSA-------------ARRMDTLNDLLAA 218 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-----------~~~g-------------~~~~~sL~eLL~~ 218 (620)
++|||||+|.||..||..+...|++|++||++....... ...| +....++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 579999999999999999999999999999986432210 0111 2234566 67899
Q ss_pred CcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEE
Q 007040 219 SDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVL 298 (620)
Q Consensus 219 sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVI 298 (620)
||+||.++|...+.+.-+-.+....++++++|+..+.+- ....+.+.+.. .-..+++..|. |.+ .++.|.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~-~~~~ig~hf~~-P~~------~~~lve 463 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKR-PENFVGMHFFN-PVH------MMPLVE 463 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSC-GGGEEEEECCS-STT------TCCEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcC-ccceEEEEccC-Ccc------cCceEE
Confidence 999999999888766544456667899999998444332 22345544422 22334555554 322 356666
Q ss_pred EcCCCCCCcHHHHHH
Q 007040 299 ILPRSADYSEEVWME 313 (620)
Q Consensus 299 lTPHiAg~T~ea~~~ 313 (620)
+.++-. .++++.+.
T Consensus 464 vv~g~~-t~~e~~~~ 477 (715)
T 1wdk_A 464 VIRGEK-SSDLAVAT 477 (715)
T ss_dssp EEECSS-CCHHHHHH
T ss_pred EEECCC-CCHHHHHH
Confidence 665432 23444333
No 127
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.24 E-value=7.7e-07 Score=89.92 Aligned_cols=106 Identities=8% Similarity=-0.000 Sum_probs=71.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee------------cCCHHhhhc---CCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR------------MDTLNDLLA---ASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~------------~~sL~eLL~---~sDvVil~lP 227 (620)
++|+|||+|.||..+|..|...|++|++||++..........+... ..+..++.. .+|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5799999999999999999999999999999763322111111110 013334444 8999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
. ..+..++ ......+++++++|++..|- -..+.+.+.+...
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKE 124 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGG
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCc
Confidence 4 4555555 34556788999999997652 2234455555443
No 128
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.24 E-value=1.1e-06 Score=91.16 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=71.3
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCC-------CEEEEECCCCC-----CCCcc--------------ccCCceecCCHHhh
Q 007040 162 GLVLGIVGRSASARALATRSLSFK-------MSVLYFDVPEG-----KGKVT--------------FPSAARRMDTLNDL 215 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG-------~~V~~~dr~~~-----~~~~~--------------~~~g~~~~~sL~eL 215 (620)
.++|+|||+|.||..+|..|...| ++|.+|+++.. ..... ...++....++.++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 468999999999999999999888 89999999875 11100 01123345678888
Q ss_pred hcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChh
Q 007040 216 LAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 216 L~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~v 258 (620)
+..+|+|++++|. ..+..++ ......+++++++|++..|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999995 4555555 344566889999999988643
No 129
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.23 E-value=4.8e-07 Score=87.13 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=77.7
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-C-------ceecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-A-------ARRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-g-------~~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
++|+||| .|.||+.+|+.|...|++|++++++.......... + .. ..++.+++..+|+|++++|. ..+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHH
Confidence 4799999 99999999999999999999999875432211100 1 22 35788889999999999993 3445
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhc------------HHHHHHHHHcCCcceeEeecCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLD------------DCAVKQLLIDGTLAGCALDGAE 282 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVD------------e~AL~~AL~~G~I~GAaLDV~E 282 (620)
.++. +....++ ++++|+++.|--.+ .+.+.+.+.. ...++++.
T Consensus 79 ~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~ 133 (212)
T 1jay_A 79 DTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALH 133 (212)
T ss_dssp HHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCT
T ss_pred HHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEcc
Confidence 5543 2334454 99999999865432 4566666642 24566654
No 130
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.22 E-value=3.7e-06 Score=84.43 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=58.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
-++|||||+|.||.++|+.|+..|++|++|++. ++ +..|| ++++|.. .+..++ .+..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl-~~l~ 62 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV-EKLS 62 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH-HHHH
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH-HHHH
Confidence 468999999999999999999999999999982 22 56799 8899976 566665 4556
Q ss_pred hccCCCcEEEEcC
Q 007040 242 QHIKPGAFLVNTG 254 (620)
Q Consensus 242 ~~MK~gAiLINvg 254 (620)
..+++|+++|+++
T Consensus 63 ~~l~~g~ivvd~s 75 (232)
T 3dfu_A 63 AFARRGQMFLHTS 75 (232)
T ss_dssp TTCCTTCEEEECC
T ss_pred HhcCCCCEEEEEC
Confidence 6789999999974
No 131
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.22 E-value=2.7e-07 Score=96.71 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=69.9
Q ss_pred EEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc--------------ccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 164 VLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT--------------FPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 164 tVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~--------------~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+|+|||+|.||..+|..|...|++|++||++....+.. ...++....++.+++..+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999999999999999975322110 011234456788889999999999994
Q ss_pred hhhHhhcCHH---HhhccCC-CcEEEEcCCCh
Q 007040 230 DETIQIINAE---CLQHIKP-GAFLVNTGSSQ 257 (620)
Q Consensus 230 ~~T~~lI~~~---~L~~MK~-gAiLINvgRG~ 257 (620)
..+..++... ....+++ ++++|+++.|-
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 5555555431 4456778 99999998764
No 132
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.21 E-value=3.4e-06 Score=83.43 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=73.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEE-EEECCCCCCCCccccCCceecCCHHhhh-cCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSV-LYFDVPEGKGKVTFPSAARRMDTLNDLL-AASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V-~~~dr~~~~~~~~~~~g~~~~~sL~eLL-~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
++|||||+|.||+.+++.+...|++| .+||++. .... .+.++++++ .++|+|++++|..... . -.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~-~----~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVK-D----YA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHH-H----HH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHH-H----HH
Confidence 37999999999999999998889997 6899875 2211 456899999 6999999999944222 1 22
Q ss_pred hhccCCCcEEEEcCCChhhcH---HHHHHHHHcCCc
Q 007040 241 LQHIKPGAFLVNTGSSQLLDD---CAVKQLLIDGTL 273 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~vVDe---~AL~~AL~~G~I 273 (620)
...++.|..+|..+-+..-+. ..|.++.++..+
T Consensus 68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~ 103 (236)
T 2dc1_A 68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGR 103 (236)
T ss_dssp HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCC
Confidence 456778999999988776655 567777665433
No 133
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.20 E-value=9.3e-07 Score=91.74 Aligned_cols=89 Identities=11% Similarity=0.127 Sum_probs=66.4
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC-----------CceecCCHHhhhcCCcEEEEcccCCh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPS-----------AARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~-----------g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
..+|+|||+|.||..+|..|...|++|++|+++....+..... ++....++.+ +..+|+|++++|. .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 4579999999999999999999999999999975332211111 1344567888 8899999999994 5
Q ss_pred hhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 231 ETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 231 ~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
.+..++.. +.. ++.++|++.-|
T Consensus 92 ~~~~v~~~--l~~--~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHLLR--LPV--KPSMVLNLSKG 113 (335)
T ss_dssp GHHHHHTT--CSS--CCSEEEECCCC
T ss_pred HHHHHHHH--hCc--CCCEEEEEeCC
Confidence 66655532 222 79999999876
No 134
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.20 E-value=9.4e-07 Score=86.66 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=64.6
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEE-ECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLY-FDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAE 239 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~-~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~ 239 (620)
-++|||||+|.||..+|+.|...|++|++ +|++........ ..+.....+..+.+..+|+|++++|.. ....++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD-SIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG-GHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH-HHHHHHHH-
Confidence 36899999999999999999999999999 999875443211 113333334556688999999999932 33333321
Q ss_pred HhhccCCCcEEEEcCCCh
Q 007040 240 CLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 240 ~L~~MK~gAiLINvgRG~ 257 (620)
+.. .++.++|+++-|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 222 3588999998653
No 135
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.19 E-value=3.2e-06 Score=97.42 Aligned_cols=129 Identities=14% Similarity=0.025 Sum_probs=84.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-----------ccC-------------CceecCCHHhhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT-----------FPS-------------AARRMDTLNDLLAA 218 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-----------~~~-------------g~~~~~sL~eLL~~ 218 (620)
++|||||+|.||..||..+...|++|++||+++...... ... .+....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 579999999999999999999999999999986422110 001 12334566 57889
Q ss_pred CcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEE
Q 007040 219 SDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVL 298 (620)
Q Consensus 219 sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVI 298 (620)
||+||.++|...+.+.-+-.+....++++++|+..+.+- ....+.+.+.. .-..+++..|. |++ .+|.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~-p~~~iG~hf~~-P~~------~~~lve 461 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTI--DLNKIGERTKS-QDRIVGAHFFS-PAH------IMPLLE 461 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTCSC-TTTEEEEEECS-STT------TCCEEE
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCC--CHHHHHHHhcC-CCCEEEecCCC-Ccc------cCceEE
Confidence 999999999887765544456677899999996543332 22345444422 22234555555 322 356666
Q ss_pred EcCC
Q 007040 299 ILPR 302 (620)
Q Consensus 299 lTPH 302 (620)
+.++
T Consensus 462 vv~g 465 (725)
T 2wtb_A 462 IVRT 465 (725)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6654
No 136
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.18 E-value=9.6e-07 Score=93.47 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=73.4
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCc--------------cccCCceecCCHHhhhcCCcEEEEccc
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKV--------------TFPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~--------------~~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
.++|+|||.|.||..+|..|...|++|.+|++++...+. .++..+....++.+.+..+|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 468999999999999999999999999999997532110 011123445688899999999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCChhhc
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQLLD 260 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVD 260 (620)
.. ..+.++ .+....+++++++|++.-|-..+
T Consensus 109 ~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 109 SF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 43 455555 34566789999999998765444
No 137
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.18 E-value=9.7e-07 Score=93.09 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=69.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC-------CEEEEECCCCC-----CCCcc--------------ccCCceecCCHHhhh
Q 007040 163 LVLGIVGRSASARALATRSLSFK-------MSVLYFDVPEG-----KGKVT--------------FPSAARRMDTLNDLL 216 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG-------~~V~~~dr~~~-----~~~~~--------------~~~g~~~~~sL~eLL 216 (620)
++|+|||.|.||..+|..|...| ++|++|+++.. ..... ...++....++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998878 99999999765 21100 112334456788889
Q ss_pred cCCcEEEEcccCChhhHhhcCHHHhh----ccCCCcEEEEcCCC
Q 007040 217 AASDVISLHCAVTDETIQIINAECLQ----HIKPGAFLVNTGSS 256 (620)
Q Consensus 217 ~~sDvVil~lPlT~~T~~lI~~~~L~----~MK~gAiLINvgRG 256 (620)
..+|+|++++|. .....++. +... .+++++++|++..|
T Consensus 102 ~~aDvVilav~~-~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVLA-SIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHHH-HHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCCH-HHHHHHHH-HHhhhhhccCCCCCEEEEeCCc
Confidence 999999999994 55555553 3444 68889999999876
No 138
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.18 E-value=3.2e-06 Score=91.94 Aligned_cols=109 Identities=15% Similarity=0.111 Sum_probs=75.3
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc--eecCCHHhh---------------hcCCcEE
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA--RRMDTLNDL---------------LAASDVI 222 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~--~~~~sL~eL---------------L~~sDvV 222 (620)
-+|.++.|||+|.||..+|..|...|++|++||+++...+.. ..+. ..-..++++ ++.||+|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L-~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKL-QNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 368899999999999999999999999999999987433211 1110 000112222 4579999
Q ss_pred EEcccCChh--------hHhhc--CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHH
Q 007040 223 SLHCAVTDE--------TIQII--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLI 269 (620)
Q Consensus 223 il~lPlT~~--------T~~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~ 269 (620)
++|+|.... +..+. .......|++|+++|+.+.-.+-..+.+.+.+.
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 999996542 12233 245677899999999999888777777776543
No 139
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.13 E-value=5.5e-06 Score=85.12 Aligned_cols=77 Identities=18% Similarity=0.310 Sum_probs=66.8
Q ss_pred ecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 160 CRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 160 L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
+.|+++.|||.|. +|+.+|..|...|++|++++++. .+|.+.+++||+|+.+++.. ++|..
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------~~L~~~~~~ADIVI~Avg~p----~~I~~ 209 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------KDIGSMTRSSKIVVVAVGRP----GFLNR 209 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHHSSEEEECSSCT----TCBCG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------ccHHHhhccCCEEEECCCCC----ccccH
Confidence 6899999999996 79999999999999999998642 47899999999999999853 47776
Q ss_pred HHhhccCCCcEEEEcCCCh
Q 007040 239 ECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~ 257 (620)
+. +|||+++||+|.-.
T Consensus 210 ~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 210 EM---VTPGSVVIDVGINY 225 (276)
T ss_dssp GG---CCTTCEEEECCCEE
T ss_pred hh---ccCCcEEEEeccCc
Confidence 54 59999999999765
No 140
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.13 E-value=2.4e-06 Score=79.37 Aligned_cols=103 Identities=12% Similarity=0.140 Sum_probs=79.1
Q ss_pred CcEEEEEeC----ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGR----SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGl----G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
-++|+|||+ |.+|..+++.|...|++|+.+|+...-.. -.|...+.++.++....|++++++| .+....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~---i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~ 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT---LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE---ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc---cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH
Confidence 567999999 89999999999999999999988752111 1466667789999889999999999 466677764
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
. .++ ...++++++.+.- ++++.+++++..+.
T Consensus 89 ~-~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 89 E-AIA-IGAKTLWLQLGVI----NEQAAVLAREAGLS 119 (145)
T ss_dssp H-HHH-HTCCEEECCTTCC----CHHHHHHHHTTTCE
T ss_pred H-HHH-cCCCEEEEcCChH----HHHHHHHHHHcCCE
Confidence 3 344 6677888876432 77888888877665
No 141
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.11 E-value=7e-06 Score=84.73 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=68.2
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.|. +|+.+|..|...|++|++++++. .+|.+.+++||+|+.+++. -++|.
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~----p~~I~ 218 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------KDLSLYTRQADLIIVAAGC----VNLLR 218 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHTTCSEEEECSSC----TTCBC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhhcCCEEEECCCC----CCcCC
Confidence 58999999999998 59999999999999999998642 3789999999999999984 35677
Q ss_pred HHHhhccCCCcEEEEcCCChh
Q 007040 238 AECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~v 258 (620)
.+. +|||+++||+|.-.+
T Consensus 219 ~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 219 SDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp GGG---SCTTEEEEECCCEEC
T ss_pred HHH---cCCCeEEEEeccCcc
Confidence 654 599999999997664
No 142
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.11 E-value=5.3e-06 Score=85.72 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=68.6
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.|. +|+.+|+.|...|++|+.++++. .+|.+.+++||+|+.+++.. ++|.
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p----~lI~ 217 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKP----GFIP 217 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCT----TCBC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCc----CcCC
Confidence 58999999999997 59999999999999999997543 47899999999999999943 4777
Q ss_pred HHHhhccCCCcEEEEcCCChhh
Q 007040 238 AECLQHIKPGAFLVNTGSSQLL 259 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vV 259 (620)
.+. +|||+++||+|.-.+-
T Consensus 218 ~~~---vk~GavVIDVgi~r~~ 236 (288)
T 1b0a_A 218 GDW---IKEGAIVIDVGINRLE 236 (288)
T ss_dssp TTT---SCTTCEEEECCCEECT
T ss_pred HHH---cCCCcEEEEccCCccC
Confidence 665 5999999999986643
No 143
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.11 E-value=7.8e-06 Score=84.40 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=67.9
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.|. +|+.+|..|...|++|++++++. .+|.+.+++||+|+.+++. -++|.
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------RDLADHVSRADLVVVAAGK----PGLVK 219 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHHHTCSEEEECCCC----TTCBC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------cCHHHHhccCCEEEECCCC----CCCCC
Confidence 58999999999987 79999999999999999997642 3688999999999999984 35777
Q ss_pred HHHhhccCCCcEEEEcCCChh
Q 007040 238 AECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~v 258 (620)
.+. +|||+++||+|.-.+
T Consensus 220 ~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 220 GEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp GGG---SCTTCEEEECCSCSS
T ss_pred HHH---cCCCeEEEEeccccc
Confidence 654 599999999997654
No 144
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.10 E-value=7.8e-06 Score=84.37 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=67.4
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.|. +|+.+|..|...|++|++++++. .+|.+.+++||+|+.+++. -++|.
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHTTKADILIVAVGK----PNFIT 219 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCC----TTCBC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhcccCCEEEECCCC----CCCCC
Confidence 58999999999998 69999999999999999998642 3789999999999999984 35677
Q ss_pred HHHhhccCCCcEEEEcCCCh
Q 007040 238 AECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~ 257 (620)
.+. +|||+++||+|.-.
T Consensus 220 ~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 220 ADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp GGG---SCTTCEEEECCCEE
T ss_pred HHH---cCCCcEEEEecccC
Confidence 654 59999999999765
No 145
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.09 E-value=8.8e-06 Score=84.55 Aligned_cols=130 Identities=20% Similarity=0.297 Sum_probs=87.4
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.|. +|+.+|+.|...|++|++++++. .+|.+.+++||+||.+++.. ++|.
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p----~~I~ 223 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------AHLDEEVNKGDILVVATGQP----EMVK 223 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHTTCSEEEECCCCT----TCBC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------ccHHHHhccCCEEEECCCCc----ccCC
Confidence 58999999999996 69999999999999999998542 47999999999999999963 4787
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC-CcceeEeecC-CCCCCCCccccCCCcEEEcCCCCCCcHHHHHHHH
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG-TLAGCALDGA-EGPQWMEAWVREMPNVLILPRSADYSEEVWMEIR 315 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G-~I~GAaLDV~-E~P~~~~spL~~~pNVIlTPHiAg~T~ea~~~~~ 315 (620)
.+. +|||+++||+|.-.+-|... ++| ++-| ||- +.-. +. --.+||==+|.-+-+..-+.
T Consensus 224 ~~~---vk~GavVIDVgi~~~~d~~~-----~~g~klvG---DVdf~~v~-------~~-a~~iTPVPGGVGpmTiamLl 284 (301)
T 1a4i_A 224 GEW---IKPGAIVIDCGINYVPDDKK-----PNGRKVVG---DVAYDEAK-------ER-ASFITPVPGGVGPMTVAMLM 284 (301)
T ss_dssp GGG---SCTTCEEEECCCBC---------------CCBC---SBCHHHHT-------TT-CSEECCSSSSHHHHHHHHHH
T ss_pred HHH---cCCCcEEEEccCCCcccccc-----cCCCeeec---cccHHHhh-------hh-ceEeCCCCCCccHHHHHHHH
Confidence 765 57999999999876443211 234 4433 662 2200 11 23589976666554444443
Q ss_pred HHHHHHHHHH
Q 007040 316 DKAISVLQTF 325 (620)
Q Consensus 316 ~~a~enL~~~ 325 (620)
+.+++..+++
T Consensus 285 ~Ntv~aa~~~ 294 (301)
T 1a4i_A 285 QSTVESAKRF 294 (301)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 146
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.09 E-value=8.6e-06 Score=83.90 Aligned_cols=80 Identities=20% Similarity=0.341 Sum_probs=68.6
Q ss_pred eecCcEEEEEeCChh-hHHHHHHHhhC--CCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhh
Q 007040 159 RCRGLVLGIVGRSAS-ARALATRSLSF--KMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQI 235 (620)
Q Consensus 159 ~L~GktVGIIGlG~I-G~~vA~~Lkaf--G~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~l 235 (620)
++.|+++.|||.|.| |+.+|+.|... |++|+.++++. .+|.+.+++||+|+.+++.. ++
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p----~~ 216 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVA----HL 216 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCT----TC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCC----cc
Confidence 589999999999986 99999999999 89999997554 47999999999999999944 46
Q ss_pred cCHHHhhccCCCcEEEEcCCChhh
Q 007040 236 INAECLQHIKPGAFLVNTGSSQLL 259 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~vV 259 (620)
|..+. +|+|+++||+|.-.+.
T Consensus 217 I~~~~---vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVSRTD 237 (281)
T ss_dssp BCGGG---SCTTCEEEECCEEEET
T ss_pred cCHHH---cCCCcEEEEccCCCCC
Confidence 87765 5899999999976643
No 147
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.08 E-value=3.8e-06 Score=88.05 Aligned_cols=91 Identities=23% Similarity=0.188 Sum_probs=69.1
Q ss_pred eecCcEEEEEeCChh-hHHHHHHHhhCCCEEEEECCCCCCC---CccccCCce-e-----c--CCHHhhhcCCcEEEEcc
Q 007040 159 RCRGLVLGIVGRSAS-ARALATRSLSFKMSVLYFDVPEGKG---KVTFPSAAR-R-----M--DTLNDLLAASDVISLHC 226 (620)
Q Consensus 159 ~L~GktVGIIGlG~I-G~~vA~~LkafG~~V~~~dr~~~~~---~~~~~~g~~-~-----~--~sL~eLL~~sDvVil~l 226 (620)
++.|+++.|||.|.| |+.+|+.|.+.|++|+++|++.... ...+..... . . .+|.+.+.+||+||.++
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt 253 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 253 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence 589999999999976 9999999999999999999872110 111111111 1 1 57899999999999999
Q ss_pred cCChhhHhh-cCHHHhhccCCCcEEEEcCCC
Q 007040 227 AVTDETIQI-INAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 227 PlT~~T~~l-I~~~~L~~MK~gAiLINvgRG 256 (620)
+.. ++ |..+. +|+|+++||+|..
T Consensus 254 g~p----~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 254 PSE----NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp CCT----TCCBCTTT---SCTTEEEEECSSS
T ss_pred CCC----cceeCHHH---cCCCeEEEEcCCC
Confidence 853 34 77655 5899999999874
No 148
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.07 E-value=5.9e-06 Score=84.82 Aligned_cols=107 Identities=8% Similarity=0.038 Sum_probs=73.7
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccC-CceecCCHHhhhcCCcEEEEcccCC--hhhHhh
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPS-AARRMDTLNDLLAASDVISLHCAVT--DETIQI 235 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~-g~~~~~sL~eLL~~sDvVil~lPlT--~~T~~l 235 (620)
+.|+++.|||.|.+|+++|..|...|+ +|++++|+.......... .....+++.+++..+|+||+++|.. +.....
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~ 194 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSV 194 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCC
Confidence 689999999999999999999999999 999999987554322211 1122345677788999999999975 222222
Q ss_pred cCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 236 INAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
+. +..++++++++++...+.. . .|+++.++.
T Consensus 195 l~---~~~l~~~~~V~D~vY~P~~-T-~ll~~A~~~ 225 (277)
T 3don_A 195 IS---LNRLASHTLVSDIVYNPYK-T-PILIEAEQR 225 (277)
T ss_dssp SC---CTTCCSSCEEEESCCSSSS-C-HHHHHHHHT
T ss_pred CC---HHHcCCCCEEEEecCCCCC-C-HHHHHHHHC
Confidence 32 4567889999998776543 2 355444443
No 149
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.05 E-value=8.5e-06 Score=84.67 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=67.2
Q ss_pred eecCcEEEEEeCCh-hhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHH--hhhcCCcEEEEcccCChhhHhh
Q 007040 159 RCRGLVLGIVGRSA-SARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLN--DLLAASDVISLHCAVTDETIQI 235 (620)
Q Consensus 159 ~L~GktVGIIGlG~-IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~--eLL~~sDvVil~lPlT~~T~~l 235 (620)
++.|+++.|||.|. +|+.+|..|...|++|++++++. .+|. +.+++||+|+.++|.. ++
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T--------------~~l~l~~~~~~ADIVI~Avg~p----~~ 223 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT--------------STEDMIDYLRTADIVIAAMGQP----GY 223 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS--------------CHHHHHHHHHTCSEEEECSCCT----TC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC--------------CCchhhhhhccCCEEEECCCCC----CC
Confidence 58999999999998 69999999999999999998743 1466 8999999999999953 47
Q ss_pred cCHHHhhccCCCcEEEEcCCChh
Q 007040 236 INAECLQHIKPGAFLVNTGSSQL 258 (620)
Q Consensus 236 I~~~~L~~MK~gAiLINvgRG~v 258 (620)
|..+. +|+|+++||+|.-.+
T Consensus 224 I~~~~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 224 VKGEW---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp BCGGG---SCTTCEEEECCCEEE
T ss_pred CcHHh---cCCCcEEEEEeccCC
Confidence 77654 599999999997554
No 150
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.00 E-value=8.5e-06 Score=82.49 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=75.7
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCChhh-Hhhc
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVTDET-IQII 236 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT~~T-~~lI 236 (620)
+.| +++|||.|.+|++++..|...|+ +|++++|+......... .+.....++.++++.+|+|++++|..-.. ...|
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i 185 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV 185 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC
Confidence 467 89999999999999999999999 99999998744332111 12234567888899999999999964211 1234
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
.. ..++++.+++++.-+ ...-|.++.+.|
T Consensus 186 ~~---~~l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 186 SD---DSLKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CH---HHHTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CH---HHhCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 43 336789999999888 444455555554
No 151
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.97 E-value=6.4e-06 Score=84.98 Aligned_cols=109 Identities=16% Similarity=0.083 Sum_probs=74.9
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcc---ccC---CceecCCHHhhhcCCcEEEEcccCChhh
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVT---FPS---AARRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~---~~~---g~~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
+.|++++|||.|.+|+++|..|...|+ +|++++|+....... +.. .....+++.+.+..+|+|++++|.....
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~ 218 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHP 218 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCC
Confidence 678999999999999999999999998 999999986432211 110 1111235667788999999999976421
Q ss_pred H--h-hcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 233 I--Q-IINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 233 ~--~-lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
. . .+. ...++++++++|+...+.. . .|.+..++..+
T Consensus 219 ~~~~~~i~---~~~l~~~~~v~D~~y~P~~-T-~ll~~A~~~G~ 257 (297)
T 2egg_A 219 RVEVQPLS---LERLRPGVIVSDIIYNPLE-T-KWLKEAKARGA 257 (297)
T ss_dssp CCSCCSSC---CTTCCTTCEEEECCCSSSS-C-HHHHHHHHTTC
T ss_pred CCCCCCCC---HHHcCCCCEEEEcCCCCCC-C-HHHHHHHHCcC
Confidence 1 1 133 3457899999999885432 2 35555555443
No 152
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.93 E-value=2.9e-06 Score=80.00 Aligned_cols=96 Identities=8% Similarity=-0.020 Sum_probs=66.4
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhC-CCEEEEECCCCCCCCccccCCcee----cCC---HHhh--hcCCcEEEEcccC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSF-KMSVLYFDVPEGKGKVTFPSAARR----MDT---LNDL--LAASDVISLHCAV 228 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~~g~~~----~~s---L~eL--L~~sDvVil~lPl 228 (620)
.+.+++|+|+|+|.||+.+|+.|... |++|+++|+++.........+... ..+ +.++ +..+|+|++++|.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 46788999999999999999999999 999999999864332211122211 112 4444 6789999999997
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
...+..++ ..+..+.+...+|....+
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 116 HQGNQTAL--EQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp HHHHHHHH--HHHHHTTCCSEEEEEESS
T ss_pred hHHHHHHH--HHHHHHCCCCEEEEEECC
Confidence 65554443 355667766666665443
No 153
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.89 E-value=9.5e-06 Score=83.07 Aligned_cols=105 Identities=16% Similarity=-0.015 Sum_probs=71.7
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
|+++.|||.|.+|++++..|...|.+|++++|+..........++.. .+++++ ..+|+||+++|........++.+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~-~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l 195 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDC-FMEPPK-SAFDLIINATSASLHNELPLNKEVL 195 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEE-ESSCCS-SCCSEEEECCTTCCCCSCSSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeE-ecHHHh-ccCCEEEEcccCCCCCCCCCChHHH
Confidence 78999999999999999999999999999999986543221112221 234443 3899999999976332234555533
Q ss_pred h-ccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 242 Q-HIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 242 ~-~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
. .++++.+++|+...+ ... |+++.++.
T Consensus 196 ~~~l~~~~~v~D~vY~P--~T~-ll~~A~~~ 223 (269)
T 3phh_A 196 KGYFKEGKLAYDLAYGF--LTP-FLSLAKEL 223 (269)
T ss_dssp HHHHHHCSEEEESCCSS--CCH-HHHHHHHT
T ss_pred HhhCCCCCEEEEeCCCC--chH-HHHHHHHC
Confidence 3 567788888888776 333 44444443
No 154
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.88 E-value=5.1e-06 Score=84.36 Aligned_cols=104 Identities=11% Similarity=-0.001 Sum_probs=69.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-----C-CEEEEECCCCCCCCcccc-CCceecC-------------CHHhhhcCCcEE
Q 007040 163 LVLGIVGRSASARALATRSLSF-----K-MSVLYFDVPEGKGKVTFP-SAARRMD-------------TLNDLLAASDVI 222 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-----G-~~V~~~dr~~~~~~~~~~-~g~~~~~-------------sL~eLL~~sDvV 222 (620)
++|+|||+|.||..+|..|... | ++|++|++ ....+.... .+..... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5799999999999999999988 9 99999998 422111111 1222111 223457889999
Q ss_pred EEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHc
Q 007040 223 SLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLID 270 (620)
Q Consensus 223 il~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~ 270 (620)
++++|... +..++ ......++++.++|.+.-| +-..+.|.+.+..
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~ 132 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPD 132 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCC
Confidence 99999764 44444 3344567789999998776 2223445555543
No 155
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.88 E-value=3.6e-05 Score=70.90 Aligned_cols=97 Identities=11% Similarity=-0.003 Sum_probs=64.6
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCceec----CC---HHhh-hcCCcEEEEcccCC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAARRM----DT---LNDL-LAASDVISLHCAVT 229 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~~~----~s---L~eL-L~~sDvVil~lPlT 229 (620)
...+++|.|+|+|.||+.+|+.|+..|++|+++|+++....... ..+.... .+ +.+. +..+|+|++++|..
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 46788999999999999999999999999999999865443222 2232211 11 3333 67899999999964
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
..+..+ ......+.+...+|-..++.
T Consensus 96 ~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 96 STNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred HHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 333222 23444455566666666654
No 156
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.82 E-value=1.6e-06 Score=87.74 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=56.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEE-EEECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSV-LYFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V-~~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
++|||||+|.||..+|+.|... ++| .+||++........ ..+. ...++++++.++|+|++++|... ...++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~~v~---- 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IKTVA---- 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HHHHH----
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HHHHH----
Confidence 4699999999999999999877 899 58998764332111 1123 44577888889999999999763 23333
Q ss_pred hhcc-CCCcEEEEcCCC
Q 007040 241 LQHI-KPGAFLVNTGSS 256 (620)
Q Consensus 241 L~~M-K~gAiLINvgRG 256 (620)
..+ +++.++||++-+
T Consensus 76 -~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 76 -NHLNLGDAVLVHCSGF 91 (276)
T ss_dssp -TTTCCSSCCEEECCSS
T ss_pred -HHhccCCCEEEECCCC
Confidence 333 689999999854
No 157
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.76 E-value=2e-05 Score=83.30 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=68.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHh-hCC-CEEEEECCCCCCCCccccC-----C--ceecCCHHhhhcCCcEEEEcccCChh
Q 007040 161 RGLVLGIVGRSASARALATRSL-SFK-MSVLYFDVPEGKGKVTFPS-----A--ARRMDTLNDLLAASDVISLHCAVTDE 231 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~Lk-afG-~~V~~~dr~~~~~~~~~~~-----g--~~~~~sL~eLL~~sDvVil~lPlT~~ 231 (620)
..++|||||.|.||+.+++.+. ..+ .+|.+||++.......... + +....+++++++++|+|++++|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 4678999999999999998875 344 5899999986443311110 3 3446789999999999999999762
Q ss_pred hHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 232 TIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
...+|.. ..+++|+.++++|..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2345553 568899999999863
No 158
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.76 E-value=4.1e-05 Score=80.17 Aligned_cols=167 Identities=13% Similarity=0.057 Sum_probs=104.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCc--------------------c-cc----CCceecCCHHhh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKV--------------------T-FP----SAARRMDTLNDL 215 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~--------------------~-~~----~g~~~~~sL~eL 215 (620)
.-.+|+|||.|.||..+|..+...|++|+.||+++..... . .. ..+....++.+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4568999999999999999999999999999987532110 0 00 012345688899
Q ss_pred hcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCC
Q 007040 216 LAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMP 295 (620)
Q Consensus 216 L~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~p 295 (620)
++.||+|+=++|..-+.+.-+=+++=+.++|+++|-...++ +....|.+.+.. .-..+++=.| +|++. -||.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~Hff-NP~~~-m~LV--- 156 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPV-NPPYY-IPLV--- 156 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEEC-SSTTT-CCEE---
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCC-CCccc-cchH---
Confidence 99999999999999888886666666778999998765555 344555555432 3333344323 33331 1222
Q ss_pred cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCccCC
Q 007040 296 NVLILPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAISDTEGCENE 345 (620)
Q Consensus 296 NVIlTPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~~~y~~~ 345 (620)
-||-+|+++..+. +.+ .+-+++ -|+.|.-++..-.|+..+
T Consensus 157 Eiv~g~~Ts~~~~---~~~----~~~~~~---~gk~pv~v~kd~pGFi~N 196 (319)
T 3ado_A 157 ELVPHPETSPATV---DRT----HALMRK---IGQSPVRVLKEIDGFVLN 196 (319)
T ss_dssp EEEECTTCCHHHH---HHH----HHHHHH---TTCEEEECSSCCTTTTHH
T ss_pred HhcCCCCCcHHHH---HHH----HHHHHH---hCCccCCcCCCCCCEeHH
Confidence 2555665443332 222 222222 355566666666666543
No 159
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.73 E-value=6.5e-05 Score=78.25 Aligned_cols=89 Identities=24% Similarity=0.328 Sum_probs=66.9
Q ss_pred cCcEEEEEeCChhhHHHHHHHhh-CC-CEEEEECCCCCCCCccc--c--CCc--eecCCHHhhhcCCcEEEEcccCChhh
Q 007040 161 RGLVLGIVGRSASARALATRSLS-FK-MSVLYFDVPEGKGKVTF--P--SAA--RRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~Lka-fG-~~V~~~dr~~~~~~~~~--~--~g~--~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
..++++|||.|.||+.+++.|.. ++ -+|.+|||+ ....... . .+. ... ++++++++||+|++|+|..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 46789999999999999999975 44 489999999 3322100 0 122 344 8999999999999999975
Q ss_pred HhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 233 IQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
..+|.. ..++||++++++|...
T Consensus 195 ~pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 195 TPLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCSSCG---GGCCTTCEEEECCCSS
T ss_pred CcccCH---HHcCCCcEEEECCCCC
Confidence 346653 4689999999998743
No 160
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.68 E-value=2.6e-05 Score=80.97 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=66.1
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCC-------------ceecCCHHhhhcCCcEEEEcccC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSA-------------ARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g-------------~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.++|+|||.|.||..+|..|...|++|.+|++.. ..+.....+ +....++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGA-TLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH-HHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH-HHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 3679999999999999999999999999999852 111001111 112346766 5889999999996
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..+..++. .....+++++++|.+.-|
T Consensus 81 -~~~~~~~~-~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 -PALESVAA-GIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -HHHHHHHG-GGSSSCCTTCEEEECCSS
T ss_pred -hhHHHHHH-HHHhhCCCCCEEEEECCC
Confidence 45555553 344457889999999888
No 161
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.66 E-value=3.7e-05 Score=68.20 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=59.9
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee----cCC---HHhh-hcCCcEEEEcccCCh
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR----MDT---LNDL-LAASDVISLHCAVTD 230 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~----~~s---L~eL-L~~sDvVil~lPlT~ 230 (620)
.+.+++|+|+|.|.||+.+|+.|...|++|+++|++..........+... ..+ +.++ +..+|+|++++|...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 35678899999999999999999999999999998753222111112111 112 3333 568999999999752
Q ss_pred hhHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 231 ETIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 231 ~T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
++. +.-......+.+. .+|-...+.
T Consensus 83 ~~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 83 QAS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HHH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred HHH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 222 1222344556666 555555544
No 162
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.64 E-value=4.6e-05 Score=78.73 Aligned_cols=104 Identities=11% Similarity=0.103 Sum_probs=69.6
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-------------cCCceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-------------PSAARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-------------~~g~~~~~sL~eLL~~sDvVil~l 226 (620)
...++|+|||.|.||..+|..|...|++|..| ++....+... ...+....++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 35678999999999999999999999999999 6542211000 011122345654 57899999999
Q ss_pred cCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHH
Q 007040 227 AVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLL 268 (620)
Q Consensus 227 PlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL 268 (620)
|.. .+..++ ......+++++++|.+.-|= -.++.|.+.+
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~ 133 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLL 133 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHc
Confidence 965 555555 33445678999999987762 2224555555
No 163
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.62 E-value=2.4e-05 Score=67.18 Aligned_cols=89 Identities=16% Similarity=0.031 Sum_probs=59.5
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCC-CEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccCChhh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFK-MSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
.+++|+|+|.|.||+.+++.|...| ++|++++++..........+. .....+.+++..+|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3678999999999999999999999 899999997643221111111 112346677889999999997442 2
Q ss_pred HhhcCHHHhhccCCCcEEEEcC
Q 007040 233 IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvg 254 (620)
..++. ...+.|..+++.+
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 22221 1234566677665
No 164
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.61 E-value=0.00017 Score=66.40 Aligned_cols=104 Identities=14% Similarity=0.218 Sum_probs=75.5
Q ss_pred cCcEEEEEeC----ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc
Q 007040 161 RGLVLGIVGR----SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 161 ~GktVGIIGl----G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI 236 (620)
.-++|+|||. |++|..+++.|+..|++|+.+++...... . .|...+.++.++-...|++++++|. +.+..++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~--i-~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~ 87 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE--L-FGEEAVASLLDLKEPVDILDVFRPP-SALMDHL 87 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE--E-TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc--C-CCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH
Confidence 4567999999 89999999999999999888777621111 1 4566677899998899999999996 5566666
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
. +..+ ...++++++.+-. ++++.+..++..+.
T Consensus 88 ~-~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 88 P-EVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp H-HHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred H-HHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 3 3444 3345676665442 57788888776654
No 165
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.60 E-value=0.00021 Score=73.66 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=74.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC------ceecCCHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA------ARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g------~~~~~sL~eLL~~sDvVil~lP 227 (620)
++|+|||.|.||..+|..|...|.+|.+|+|... +... ..+ .....+++++...+|+|++++|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 5799999999999999999999999999998752 1000 011 1123567777668999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
... +..++ ......+++++++|.+.-| +-.++.|.+.+-...+.
T Consensus 81 ~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 81 VVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred CCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 663 33333 2344567889999988766 22345666666554443
No 166
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.60 E-value=7.4e-05 Score=79.28 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=62.7
Q ss_pred cEEEEEeCChhhHHHHHHHhh-CCCEEEEEC---CCCCCCCcc-cc---------C-C--------c-eecCCHHhhhcC
Q 007040 163 LVLGIVGRSASARALATRSLS-FKMSVLYFD---VPEGKGKVT-FP---------S-A--------A-RRMDTLNDLLAA 218 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka-fG~~V~~~d---r~~~~~~~~-~~---------~-g--------~-~~~~sL~eLL~~ 218 (620)
++|+|||.|.||..+|..|.. .|++|.+|+ ++....... .. . + . ....++++++..
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 579999999999999999987 599999999 542111110 00 0 1 1 134578888899
Q ss_pred CcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 219 SDVISLHCAVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 219 sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
+|+|++++|... ...++ ......+++++++|..
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999653 44444 3344567889999985
No 167
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.58 E-value=3.4e-05 Score=70.06 Aligned_cols=92 Identities=11% Similarity=0.093 Sum_probs=62.4
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee----cCC---HHhh-hcCCcEEEEcccCChhhH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR----MDT---LNDL-LAASDVISLHCAVTDETI 233 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~----~~s---L~eL-L~~sDvVil~lPlT~~T~ 233 (620)
..++.|+|+|.+|+.+|+.|...|++|+++|+++.........+... ..+ |.++ +..+|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 34699999999999999999999999999999875433211222221 111 2222 568999999999776655
Q ss_pred hhcCHHHhhccCCCcEEEEcCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgR 255 (620)
.++ ..+..+.++..+|-..+
T Consensus 87 ~~~--~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARAH 106 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEES
T ss_pred HHH--HHHHHHCCCCeEEEEEC
Confidence 443 34556666766665443
No 168
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.57 E-value=0.00025 Score=65.47 Aligned_cols=101 Identities=10% Similarity=0.094 Sum_probs=74.5
Q ss_pred CcEEEEEeC----ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGR----SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGl----G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
-++|+|||. |.+|..+++.|+..|++|+.+++... . . .|...+.+++++....|++++++|. +....++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~--~--i-~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE--E--V-LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS--E--E-TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC--e--E-CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH
Confidence 578999999 79999999999999999887777641 1 2 4666677899998899999999996 55556653
Q ss_pred HHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 238 AECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+..+ ...+++++..+- .++++.+.+++..+.
T Consensus 96 -~~~~-~gi~~i~~~~g~----~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 96 -QAIK-KGAKVVWFQYNT----YNREASKKADEAGLI 126 (144)
T ss_dssp -HHHH-HTCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred -HHHH-cCCCEEEECCCc----hHHHHHHHHHHcCCE
Confidence 3333 333466655432 377788888876654
No 169
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.57 E-value=2.4e-05 Score=83.10 Aligned_cols=107 Identities=14% Similarity=0.029 Sum_probs=70.9
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc------eecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA------RRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~------~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
-++++|+|||+|.||+.+|+.|... .+|.++||+............ ...+++.++++++|+|++++|..-..
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~- 91 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF- 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH-
Confidence 4788999999999999999999987 999999998754331111111 11346788999999999999854221
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
.+ ..+.++.|..+|+++-- .-+..+|.+..++..+
T Consensus 92 ~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 92 KS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp HH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred HH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 11 23446678888887742 2233455555554444
No 170
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.54 E-value=8.9e-05 Score=65.52 Aligned_cols=91 Identities=10% Similarity=0.076 Sum_probs=58.9
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCcee----cCCHHh---h-hcCCcEEEEcccCChhh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAARR----MDTLND---L-LAASDVISLHCAVTDET 232 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~~----~~sL~e---L-L~~sDvVil~lPlT~~T 232 (620)
+++|+|+|+|.+|+.+|+.|...|++|+++|++........ ..+... ..+.+. . +..+|+|++++|....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998754322111 012211 112222 2 57899999999865333
Q ss_pred HhhcCHHHhhccCCCcEEEEcC
Q 007040 233 IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvg 254 (620)
. .-......++++.+++-+.
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEECS
T ss_pred H--HHHHHHHHcCCCEEEEEec
Confidence 2 2223455577777666543
No 171
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.53 E-value=0.00015 Score=75.03 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=68.7
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcc------------ccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVT------------FPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~------------~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.++|+|||.|.||..+|..|...|+ +|+.||++....... ....+....++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999998898 999999986432210 01112233567 678999999999942
Q ss_pred C-----------hhhHhhcC--HHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 229 T-----------DETIQIIN--AECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 229 T-----------~~T~~lI~--~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
. +++..++. .+.+....|++++|+++-..-+....+.+.
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~ 134 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKV 134 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHh
Confidence 1 12222211 122333457999999987655544455444
No 172
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.51 E-value=9.2e-05 Score=77.13 Aligned_cols=87 Identities=18% Similarity=0.259 Sum_probs=65.5
Q ss_pred cCcEEEEEeCChhhHHHHHHHhh-CC-CEEEEECCCCCCCCcccc------CCceecCCHHhhhcCCcEEEEcccCChhh
Q 007040 161 RGLVLGIVGRSASARALATRSLS-FK-MSVLYFDVPEGKGKVTFP------SAARRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~Lka-fG-~~V~~~dr~~~~~~~~~~------~g~~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
..+++||||.|.+|+.+++.|.. ++ .+|.+|||+....+.... .... ..++++++ ++|+|++++|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 45789999999999999999886 44 589999998754331111 1234 67899999 9999999999652
Q ss_pred HhhcCHHHhhccCCCcEEEEcCC
Q 007040 233 IQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvgR 255 (620)
.++.. ..+++|+.++++|.
T Consensus 200 -pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 -PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp -CCBCG---GGCCTTCEEEECSC
T ss_pred -ceecH---HHcCCCeEEEECCC
Confidence 45543 46889999999963
No 173
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.50 E-value=9.3e-05 Score=66.55 Aligned_cols=91 Identities=12% Similarity=0.059 Sum_probs=57.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce--e--cCC---HHhh-hcCCcEEEEcccCChhh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR--R--MDT---LNDL-LAASDVISLHCAVTDET 232 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~--~--~~s---L~eL-L~~sDvVil~lPlT~~T 232 (620)
.++++.|+|+|.+|+.+|+.|...|++|+++|+++.........+.. . ..+ +.++ +.++|+|++++|....
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~- 83 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF- 83 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH-
Confidence 45789999999999999999999999999999976432211111221 1 112 2222 4679999999994322
Q ss_pred HhhcCHHHhhccCCCcEEEEc
Q 007040 233 IQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINv 253 (620)
.++-...+..+....+++-+
T Consensus 84 -n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 84 -NLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp -HHHHHHHHHHHCCCCEEEEE
T ss_pred -HHHHHHHHHHhCCceEEEEE
Confidence 33333444455534444433
No 174
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.48 E-value=6.5e-05 Score=80.77 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=69.1
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCC---EEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhc
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKM---SVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~---~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI 236 (620)
..-+|.|||. |..|...++.++++|+ .|.++|.+.... +.. ++ .+..+|+||.++......-.+|
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~----~~-~i~~aDivIn~vlig~~aP~Lv 281 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGP----FD-EIPQADIFINCIYLSKPIAPFT 281 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSC----CT-HHHHSSEEEECCCCCSSCCCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCc----hh-hHhhCCEEEECcCcCCCCCccc
Confidence 3567899999 9999999999999998 899999875221 111 23 4569999999999866666799
Q ss_pred CHHHhhcc-CCCcEEEEcCC
Q 007040 237 NAECLQHI-KPGAFLVNTGS 255 (620)
Q Consensus 237 ~~~~L~~M-K~gAiLINvgR 255 (620)
..+.++.| |||++|||++-
T Consensus 282 t~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 282 NMEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp CHHHHCCTTCCCCEEEETTC
T ss_pred CHHHHhcCcCCCeEEEEEec
Confidence 99999999 99999999963
No 175
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.47 E-value=0.00024 Score=77.53 Aligned_cols=106 Identities=11% Similarity=0.022 Sum_probs=70.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCC-------cccc------------CC-ceecCCHHhhhcCCc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGK-------VTFP------------SA-ARRMDTLNDLLAASD 220 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~-------~~~~------------~g-~~~~~sL~eLL~~sD 220 (620)
+-.+|+|||+|-+|..+|..+...|++|++||.++...+ ...+ .+ .....++++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 345899999999999999999999999999998753211 0001 11 223567888899999
Q ss_pred EEEEcccCChh------hHhhcC--HHHhhcc---CCCcEEEEcCCChhhcHHHHHH
Q 007040 221 VISLHCAVTDE------TIQIIN--AECLQHI---KPGAFLVNTGSSQLLDDCAVKQ 266 (620)
Q Consensus 221 vVil~lPlT~~------T~~lI~--~~~L~~M---K~gAiLINvgRG~vVDe~AL~~ 266 (620)
++++|+|.-.. ...+.. ...-..| .+|.++|.-|.-.+=-.+.+..
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~ 156 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVA 156 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHH
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHH
Confidence 99999984211 112221 1222334 4688999988866644444433
No 176
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.42 E-value=0.00013 Score=74.86 Aligned_cols=106 Identities=10% Similarity=0.090 Sum_probs=69.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEE-EEECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSV-LYFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V-~~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI~~ 238 (620)
.+|||||+|.||+.+++.+... ++++ .++|++.......... +..+.+++++++ ++|+|++++|......
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~----- 84 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAE----- 84 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHH-----
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHH-----
Confidence 5799999999999999999876 6775 4888876433222112 445678999996 7999999999543211
Q ss_pred HHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCcc
Q 007040 239 ECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 239 ~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I~ 274 (620)
-....++.|. +++.- .--.+-+..+|.++.++..+.
T Consensus 85 ~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 85 ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 1223355564 56552 223445566788777655443
No 177
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.41 E-value=0.00044 Score=71.88 Aligned_cols=77 Identities=26% Similarity=0.352 Sum_probs=66.0
Q ss_pred eecCcEEEEEeCChh-hHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 159 RCRGLVLGIVGRSAS-ARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 159 ~L~GktVGIIGlG~I-G~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
++.|+++.|||.+.| |+++|.+|...|++|+.+.... .+|.+.+++||+|+.++.-. ++|.
T Consensus 176 ~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~~~ADIvV~A~G~p----~~i~ 237 (303)
T 4b4u_A 176 EIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELVKQADIIVGAVGKA----ELIQ 237 (303)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHHHTCSEEEECSCST----TCBC
T ss_pred CCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHhhcCCeEEeccCCC----Cccc
Confidence 589999999999876 9999999999999999987543 37899999999999998743 5787
Q ss_pred HHHhhccCCCcEEEEcCCC
Q 007040 238 AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG 256 (620)
.+ ++|+|+++||+|--
T Consensus 238 ~d---~vk~GavVIDVGin 253 (303)
T 4b4u_A 238 KD---WIKQGAVVVDAGFH 253 (303)
T ss_dssp GG---GSCTTCEEEECCCB
T ss_pred cc---cccCCCEEEEecee
Confidence 65 57899999999853
No 178
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.38 E-value=7.5e-05 Score=76.70 Aligned_cols=96 Identities=13% Similarity=0.121 Sum_probs=65.2
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcc---ccC-CceecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVT---FPS-AARRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~---~~~-g~~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
.+.|+++.|+|.|.+|++++..|...|+ +|++++|+....... +.. +.....+++++...+|+||+++|......
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 3689999999999999999999999997 999999986432211 100 11122356666688999999999763321
Q ss_pred -hhcCHHHhhccCCCcEEEEcCCCh
Q 007040 234 -QIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 234 -~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
..+.. ..++++++++++.-.+
T Consensus 203 ~~~l~~---~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 203 LPAIDP---VIFSSRSVCYDMMYGK 224 (281)
T ss_dssp -CSCCG---GGEEEEEEEEESCCCS
T ss_pred CCCCCH---HHhCcCCEEEEecCCC
Confidence 12332 3456677777776544
No 179
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.36 E-value=7.3e-05 Score=75.81 Aligned_cols=71 Identities=8% Similarity=0.040 Sum_probs=50.3
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---cC-CceecCCHHhhhc-CCcEEEEcccCCh
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF---PS-AARRMDTLNDLLA-ASDVISLHCAVTD 230 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---~~-g~~~~~sL~eLL~-~sDvVil~lPlT~ 230 (620)
+.+++++|+|.|.+|+++|..|...|.+|++++|+........ .. +.....+++++.. .+|+|++++|...
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 6789999999999999999999999999999999864322111 00 0011223444434 8999999999763
No 180
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.35 E-value=0.00034 Score=71.81 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=72.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCC--------------ceecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSA--------------ARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g--------------~~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|+|||.|.||..+|..|...|.+|.+|+|... +.....| .....++++ +..+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDY--EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTH--HHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcH--HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 5799999999999999999999999999998751 1000111 111245554 6789999999995
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcce
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAG 275 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~G 275 (620)
.. +..++ ...-..+++++++|.+.-| +-.++.|.+.+-..++.+
T Consensus 80 ~~-~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~ 123 (312)
T 3hn2_A 80 FA-NSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIG 123 (312)
T ss_dssp GG-GGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEE
T ss_pred CC-cHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEE
Confidence 53 33333 2344567889999998776 222455666665545443
No 181
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.35 E-value=0.00023 Score=77.51 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=73.1
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCC------CCCccccCCceecCCHHhhhcCCcEEEEcccCChh
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEG------KGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDE 231 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~------~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~ 231 (620)
.-|.|++|+|||+|.=|.+=|..|+--|++|++--|... .-..+..+|... .+..|+.+.||+|.+.+|...+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v-~~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV-GTYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEE-EEHHHHGGGCSEEEECSCGGGH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEe-cCHHHHHHhCCEEEEeCChhhH
Confidence 358999999999999999999999999999988766321 111223344443 4799999999999999997543
Q ss_pred hHhhcCHHHhhccCCCcEEEEcCCCh
Q 007040 232 TIQIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
. .++ .+....||+|+.|. .+.|-
T Consensus 112 ~-~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 S-DVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp H-HHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred H-HHH-HHHHhhCCCCCEEE-ecCcc
Confidence 3 344 46889999999988 45664
No 182
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.34 E-value=0.00047 Score=70.65 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=70.8
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
.+|||||+|.||+. +++.+... +++|. ++|++........ ..++...++++++..++|+|++++|.......
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~---- 81 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDV---- 81 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHH----
Confidence 57999999999997 88888764 78876 8898875543111 11333456788776789999999996533221
Q ss_pred HHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCcc
Q 007040 239 ECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 239 ~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I~ 274 (620)
....++.|. +++.- .-..+-+.++|.++.++..+.
T Consensus 82 -~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 82 -VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp -HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 223355565 66652 233455667788888776654
No 183
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.32 E-value=0.00026 Score=71.67 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=63.1
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcc---ccC-CceecCCHHhhh-cCCcEEEEcccCChhhHh
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVT---FPS-AARRMDTLNDLL-AASDVISLHCAVTDETIQ 234 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~---~~~-g~~~~~sL~eLL-~~sDvVil~lPlT~~T~~ 234 (620)
+.|++++|+|.|.||+++|..|...|.+|++++|+....... +.. +.....+++++. ..+|+|++++|..... .
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~-~ 195 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG-D 195 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-C
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC-C
Confidence 578999999999999999999999999999999986432211 100 011122344443 5899999999976431 1
Q ss_pred h--cCHHHhhccCCCcEEEEcCCCh
Q 007040 235 I--INAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 235 l--I~~~~L~~MK~gAiLINvgRG~ 257 (620)
+ +.. ..++++.+++|+.-..
T Consensus 196 ~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 196 IPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCH---HHcCCCCEEEEeccCC
Confidence 1 222 2356777888877654
No 184
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.31 E-value=0.00026 Score=75.98 Aligned_cols=149 Identities=12% Similarity=0.166 Sum_probs=97.6
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCC----CCCC----C---ccccC---CceecCCHHhhhcCCcEEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVP----EGKG----K---VTFPS---AARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~----~~~~----~---~~~~~---g~~~~~sL~eLL~~sDvVi 223 (620)
.+.+.+|.|+|.|.+|..+|+.|.+.|. +|+.+|++ .... . ..+.. ......+|.+++..+|+++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 4788999999999999999999999999 89999998 3221 0 00110 1112457999999999998
Q ss_pred EcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCC-cceeEeecCCCCCCCCccccCCCcEEEcCC
Q 007040 224 LHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGT-LAGCALDGAEGPQWMEAWVREMPNVLILPR 302 (620)
Q Consensus 224 l~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~-I~GAaLDV~E~P~~~~spL~~~pNVIlTPH 302 (620)
-+.. -++|.++.++.|+++++++.+++... |..=.++.+.|. |.+-+ -...|- +..|+++=|=
T Consensus 269 G~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~--E~~p~~a~~~g~~i~atG--r~~~p~-------Q~NN~~~FPg 332 (388)
T 1vl6_A 269 GVSR-----GNILKPEWIKKMSRKPVIFALANPVP--EIDPELAREAGAFIVATG--RSDHPN-------QVNNLLAFPG 332 (388)
T ss_dssp ECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC--SSCHHHHHHTTCSEEEES--CTTSSS-------BCCGGGTHHH
T ss_pred EeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC--CCCHHHHHHhcCeEEEeC--CCCCCC-------cCCceeEcch
Confidence 7742 28999999999999999999998543 222222333343 22111 111121 4557776664
Q ss_pred CC------CCcHHHHHHHHHHHHHHHHHH
Q 007040 303 SA------DYSEEVWMEIRDKAISVLQTF 325 (620)
Q Consensus 303 iA------g~T~ea~~~~~~~a~enL~~~ 325 (620)
++ ..+ ..++|.-.+++.|..+
T Consensus 333 i~~Gal~~~a~--i~~~m~~aAa~alA~~ 359 (388)
T 1vl6_A 333 IMKGAVEKRSK--ITKNMLLSAVEAIARS 359 (388)
T ss_dssp HHHHHHHHCSC--CCHHHHHHHHHHHHHT
T ss_pred HhHHHHhcCCc--cCHHHHHHHHHHHHhh
Confidence 21 222 3355666667766664
No 185
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.25 E-value=0.00046 Score=71.45 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=53.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCc-cccCCceecCCHHhhhc--CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKV-TFPSAARRMDTLNDLLA--ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~-~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+.+++.+... +++|+ ++|++...... ....+...+.++++++. +.|+|++++|....
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhh
Confidence 4799999999999999999876 78877 68887644321 11224566789999998 89999999996543
No 186
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.24 E-value=0.00026 Score=72.16 Aligned_cols=107 Identities=16% Similarity=0.169 Sum_probs=70.3
Q ss_pred CcEEEEEeCChhhHH-HHHHHhh-CCCEEE-EECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGRSASARA-LATRSLS-FKMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGlG~IG~~-vA~~Lka-fG~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~ 237 (620)
-.+|||||+|.||+. +++.+.. -++++. ++|+++....... ..++..+.++++++.+.|+|++++|........
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~-- 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII-- 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH--
Confidence 357999999999996 8888876 478877 6898764432111 123444689999999999999999965332222
Q ss_pred HHHhhccCCCc-EEEE-cCCChhhcHHHHHHHHHcCCc
Q 007040 238 AECLQHIKPGA-FLVN-TGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 238 ~~~L~~MK~gA-iLIN-vgRG~vVDe~AL~~AL~~G~I 273 (620)
...++.|. +|+. -.--.+-+.++|.++.++..+
T Consensus 84 ---~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 84 ---KILLNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp ---HHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 22233343 4443 233445566778887776544
No 187
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.24 E-value=0.00038 Score=71.51 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=65.9
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhh-cCCcEEEEcccCChhhHhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLL-AASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL-~~sDvVil~lPlT~~T~~lI~ 237 (620)
.+|||||+|.||+.+++.+... ++++. ++|++....... ...+. ..+.++++++ .+.|+|++++|.... .-+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h--~~~- 78 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLH--FAQ- 78 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGH--HHH-
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHH--HHH-
Confidence 3699999999999999999876 67764 788876432211 11232 4567899999 789999999995422 111
Q ss_pred HHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCc
Q 007040 238 AECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 238 ~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I 273 (620)
....++.|. +++.- ---.+-+..+|.++.++..+
T Consensus 79 --~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~ 114 (325)
T 2ho3_A 79 --AKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNC 114 (325)
T ss_dssp --HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 122334444 45542 12233444556666655443
No 188
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.23 E-value=0.00012 Score=74.75 Aligned_cols=93 Identities=11% Similarity=0.004 Sum_probs=64.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc---eecCCHHhhh-cCCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA---RRMDTLNDLL-AASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~---~~~~sL~eLL-~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++|+|||.|.||..+|..|...|.+|.+|+|+..........+. ....+..+.+ ..+|+|++++|.. .+..++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~- 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIP- 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGG-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHH-
Confidence 57999999999999999999889999999998532221111121 1111333443 7899999999965 4455543
Q ss_pred HHhhccCCCcEEEEcCCCh
Q 007040 239 ECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~ 257 (620)
..-..+++++++|.+.-|=
T Consensus 81 ~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHEEEEEEEEECCSSC
T ss_pred HHHHhhCCCCEEEEeccCc
Confidence 2334567888999987763
No 189
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.22 E-value=0.00065 Score=71.03 Aligned_cols=95 Identities=13% Similarity=0.211 Sum_probs=64.7
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCc------------cccCCceecCCHHhhhcCCcEEEEcc--
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKV------------TFPSAARRMDTLNDLLAASDVISLHC-- 226 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~------------~~~~g~~~~~sL~eLL~~sDvVil~l-- 226 (620)
.++|+|||.|.+|..+|..|...|+ +|..||+.....+. .....+....++++.++.||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4689999999999999999998888 99999998643221 01112233468888899999999999
Q ss_pred cCChhh------Hh--------hcC--HHHhhccCCCcEEEEcCCC
Q 007040 227 AVTDET------IQ--------IIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 227 PlT~~T------~~--------lI~--~~~L~~MK~gAiLINvgRG 256 (620)
|..+.- +- ++- .+.+....|++++|+++-.
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 134 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNP 134 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCc
Confidence 654321 11 110 1233344589999988653
No 190
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.20 E-value=0.00045 Score=63.20 Aligned_cols=93 Identities=10% Similarity=-0.060 Sum_probs=59.8
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCC----CCccccCCce-------ecCCHHhh-hcCCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGK----GKVTFPSAAR-------RMDTLNDL-LAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~----~~~~~~~g~~-------~~~sL~eL-L~~sDvVil~lPlT 229 (620)
.+++.|+|+|.+|+.+|+.|...|++|+++|+.... .......+.. ..+.|.++ +..+|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 457899999999999999999999999999987411 1101111111 11235554 78899999999865
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..+ +.-......+.+...+|...+.
T Consensus 83 ~~n--~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 83 ADN--AFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHH--HHHHHHHHHHTSSSCEEEECSS
T ss_pred HHH--HHHHHHHHHHCCCCEEEEEECC
Confidence 433 3334445556455555554333
No 191
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.16 E-value=0.0012 Score=68.10 Aligned_cols=68 Identities=19% Similarity=0.133 Sum_probs=50.9
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCccc-cCCce-ecCCHHhhhc--CCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVTF-PSAAR-RMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~-~~g~~-~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
.+|||||+|.||+.+++.++.. +++|. ++|++........ ..++. .+.+++++++ +.|+|++++|...
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQD 79 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 5799999999999999998865 56655 6788875544222 22332 5689999998 7899999999653
No 192
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.16 E-value=0.00043 Score=71.28 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=52.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCceecCCHHhhhc--CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLLA--ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+.+++.+... +++|. ++|+++...... ...++. +.+++++++ +.|+|++++|....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhH
Confidence 4799999999999999999876 78877 688876433211 112445 789999998 79999999996543
No 193
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.13 E-value=0.00044 Score=71.98 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=52.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCceecCCHHhhh--cCCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLL--AASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL--~~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+.+++.++.. +++|. ++|++....... ...++..+.++++++ .+.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 5799999999999999999987 88865 778876433211 112444578999999 569999999997643
No 194
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.13 E-value=0.00056 Score=70.90 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=61.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCccc---c-------CCceecCCHHhhhcCCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKVTF---P-------SAARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~~---~-------~g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
++|+|||.|.||..+|..|...|+ +|..||++........ . .......+. +.+..||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-ADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-GGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH-HHhCCCCEEEEccCCCC
Confidence 479999999999999999998888 9999999753222100 0 001112343 56789999999999643
Q ss_pred h-----------hHhhcC--HHHhhccCCCcEEEEcCCChhh
Q 007040 231 E-----------TIQIIN--AECLQHIKPGAFLVNTGSSQLL 259 (620)
Q Consensus 231 ~-----------T~~lI~--~~~L~~MK~gAiLINvgRG~vV 259 (620)
. |..++. ...+....|++++|+++-+--+
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 1 011111 1123333578999998665433
No 195
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.12 E-value=0.0006 Score=70.08 Aligned_cols=67 Identities=21% Similarity=0.269 Sum_probs=49.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC--CEEEEECCCCCCCCcc---cc-------CCcee-cCCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSFK--MSVLYFDVPEGKGKVT---FP-------SAARR-MDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG--~~V~~~dr~~~~~~~~---~~-------~g~~~-~~sL~eLL~~sDvVil~lPlT 229 (620)
++|+|||.|.||..+|..|...| .+|..||++....... .. ..... ..++ +.+..||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 47999999999999999998778 7999999975322100 00 01121 3566 6788999999999964
Q ss_pred h
Q 007040 230 D 230 (620)
Q Consensus 230 ~ 230 (620)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 3
No 196
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.12 E-value=0.00047 Score=71.16 Aligned_cols=107 Identities=7% Similarity=0.040 Sum_probs=67.5
Q ss_pred cEEEEEeCChhhHHHHHHHh-h-CCCEE-EEECCCCCCCCcc-ccCCc-eecCCHHhhhc--CCcEEEEcccCChhhHhh
Q 007040 163 LVLGIVGRSASARALATRSL-S-FKMSV-LYFDVPEGKGKVT-FPSAA-RRMDTLNDLLA--ASDVISLHCAVTDETIQI 235 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lk-a-fG~~V-~~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~--~sDvVil~lPlT~~T~~l 235 (620)
.+|||||+|.||+.+++.++ . -|++| .++|++....... ...+. ..+.++++++. .+|+|++++|......
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-- 86 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-- 86 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH--
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH--
Confidence 57999999999999999988 5 47875 5678876433211 11233 44678999997 6999999999543221
Q ss_pred cCHHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcC-Ccc
Q 007040 236 INAECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDG-TLA 274 (620)
Q Consensus 236 I~~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G-~I~ 274 (620)
-.+..++.|. +++.- .-..+-+.++|.++.+.. .+.
T Consensus 87 ---~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ---MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ---HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ---HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 1223455565 44431 122334445577777665 443
No 197
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.11 E-value=0.0014 Score=67.99 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=66.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEE-EEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHH
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSV-LYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAEC 240 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V-~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~ 240 (620)
.+|||||+|+||+.+++.+... ++++ .++|++... . ...++....++++++.++|+|++++|..... ...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~--~~~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~ 75 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-D--TKTPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQ 75 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-S--SSSCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-h--hcCCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHH
Confidence 4699999999999999999876 6775 477887544 2 1134555678888888899999999865322 223
Q ss_pred hhccCCCcEEEEcCCChh-h-cH-HHHHHHHHcC
Q 007040 241 LQHIKPGAFLVNTGSSQL-L-DD-CAVKQLLIDG 271 (620)
Q Consensus 241 L~~MK~gAiLINvgRG~v-V-De-~AL~~AL~~G 271 (620)
...++.|.-+|...-..+ + +. +.|.++.+.+
T Consensus 76 ~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~ 109 (320)
T 1f06_A 76 APKFAQFACTVDTYDNHRDIPRHRQVMNEAATAA 109 (320)
T ss_dssp HHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhC
Confidence 455666776665443332 2 22 3455555543
No 198
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.10 E-value=0.00046 Score=70.83 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=54.3
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcc---cc-----CCcee--cCCHHhhhcCCcEEEEcccC
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVT---FP-----SAARR--MDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~---~~-----~g~~~--~~sL~eLL~~sDvVil~lPl 228 (620)
+.|+++.|+|.|.+|++++..|...|+ +|++++|+....... +. ..+.. .+++.+.+.++|+||+++|.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCC
Confidence 689999999999999999999999999 799999986433211 00 01112 23788889999999999996
Q ss_pred C
Q 007040 229 T 229 (620)
Q Consensus 229 T 229 (620)
.
T Consensus 205 G 205 (283)
T 3jyo_A 205 G 205 (283)
T ss_dssp T
T ss_pred C
Confidence 4
No 199
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.08 E-value=0.00035 Score=71.89 Aligned_cols=89 Identities=11% Similarity=0.109 Sum_probs=59.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceec---------CCH-HhhhcCCcEEEEcccCChhh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRM---------DTL-NDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~---------~sL-~eLL~~sDvVil~lPlT~~T 232 (620)
++|+|||.|.||..+|..|. .|.+|.+++|+....+.....|.... .+. .+....+|+|++++|.. .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 67999999999999999999 89999999997632211111111110 001 24567899999999954 34
Q ss_pred HhhcCHHHhhccCCCcEEEEcCCC
Q 007040 233 IQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..++ +.++.+.+++ +|.+.-|
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nG 101 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNG 101 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSS
T ss_pred HHHH--HHhhcCCCCe-EEEecCC
Confidence 4443 2344455666 8887666
No 200
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.07 E-value=0.0011 Score=68.50 Aligned_cols=92 Identities=13% Similarity=0.236 Sum_probs=60.1
Q ss_pred cEEEEEeCChhhHHHHHHHhh--CCCEEEEECCCCCCCCcc---ccC---------CceecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVGRSASARALATRSLS--FKMSVLYFDVPEGKGKVT---FPS---------AARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka--fG~~V~~~dr~~~~~~~~---~~~---------g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|+|||.|.+|..+|..|.. +|.+|..||+........ ... .+....++++ +..||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999986 589999999986422210 001 1223356766 8999999999984
Q ss_pred Chh----hH-------hhcC--HHHhhccCCCcEEEEcCC
Q 007040 229 TDE----TI-------QIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 229 T~~----T~-------~lI~--~~~L~~MK~gAiLINvgR 255 (620)
... -. .++. .+.+....|++++|+++-
T Consensus 80 p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 80 PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 311 01 1110 112333357889988854
No 201
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.07 E-value=0.001 Score=68.50 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=62.4
Q ss_pred cEEEEEeCChhhHHHHHHHhh-CCCEEE-EECCCCCCCCccccCCc--eecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGRSASARALATRSLS-FKMSVL-YFDVPEGKGKVTFPSAA--RRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka-fG~~V~-~~dr~~~~~~~~~~~g~--~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
.+|||||+|+||+.+++.++. -+++|. ++|+++..... .++ ...+++.++ .++|+|++++|..... .
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~ 80 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----R 80 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----H
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----H
Confidence 579999999999999999986 478887 68988754332 222 224556555 7899999999944222 2
Q ss_pred HHhhccCCCcEEEEcCC--C-hhhcHHHHHHHHHcCC
Q 007040 239 ECLQHIKPGAFLVNTGS--S-QLLDDCAVKQLLIDGT 272 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgR--G-~vVDe~AL~~AL~~G~ 272 (620)
-....++.|.-+|...= + .+.+...|.++.++..
T Consensus 81 ~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 81 TALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp HHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 22345666777776531 2 2334455676666543
No 202
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.06 E-value=0.00035 Score=71.70 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=64.8
Q ss_pred EEEEEeCChhhHHH-HHHHhhCCCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhc--CCcEEEEcccCChhhHhhcC
Q 007040 164 VLGIVGRSASARAL-ATRSLSFKMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLA--ASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 164 tVGIIGlG~IG~~v-A~~LkafG~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI~ 237 (620)
+|||||+|.||+.+ ++.+...+++|+ ++|++....... ...+. ..+.+++++++ ++|+|++++|......
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~---- 77 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHRE---- 77 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHH----
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHH----
Confidence 69999999999998 777766788876 678876433211 11233 24578999997 4999999999543211
Q ss_pred HHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCc
Q 007040 238 AECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 238 ~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I 273 (620)
-....++.|. +++.- .-..+-+..+|.++.++..+
T Consensus 78 -~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~ 114 (332)
T 2glx_A 78 -QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGV 114 (332)
T ss_dssp -HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCC
Confidence 1223344554 44432 12234444556666655443
No 203
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.05 E-value=0.00054 Score=69.97 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=61.2
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcc---ccCCceecCCHHhhh-cCCcEEEEcccCChhhH
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVT---FPSAARRMDTLNDLL-AASDVISLHCAVTDETI 233 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~---~~~g~~~~~sL~eLL-~~sDvVil~lPlT~~T~ 233 (620)
.+.|+++.|+|.|.+|++++..|...|+ +|++++|+....... +..+.....+++++- ..+|+||+++|..-...
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~ 196 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTAD 196 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCC
Confidence 3689999999999999999999999996 999999986432211 110001122444443 78999999999653211
Q ss_pred -hhcCHHHhhccCCCcEEEEcCCC
Q 007040 234 -QIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 234 -~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..+.. +.++++.+++++.-.
T Consensus 197 ~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 197 LPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp CCCCCG---GGGTTCSEEEESSCS
T ss_pred CCCCCH---HHhCcCCEEEEeecC
Confidence 11222 234556555555443
No 204
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.04 E-value=0.0014 Score=68.49 Aligned_cols=92 Identities=21% Similarity=0.289 Sum_probs=61.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCc---c---------ccCCceecCCHHhhhcCCcEEEEcc--c
Q 007040 163 LVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKV---T---------FPSAARRMDTLNDLLAASDVISLHC--A 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~---~---------~~~g~~~~~sL~eLL~~sDvVil~l--P 227 (620)
++|+|||.|.+|..+|..|...|+ .|..||+.....+. . ....+....++ +.++.||+|++++ |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999998898 99999998643221 0 01112333567 7789999999998 4
Q ss_pred CChh---------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 228 VTDE---------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 228 lT~~---------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
..+. +..++- .+.+....|++++|+++-
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4221 111211 122333358899988755
No 205
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.02 E-value=0.00054 Score=70.51 Aligned_cols=92 Identities=14% Similarity=0.058 Sum_probs=60.7
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCC--hhhH-h
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVT--DETI-Q 234 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT--~~T~-~ 234 (620)
+.|+++.|||.|.+|++++..|...|+ +|++++|+......... .......++.+ + ++|+||+++|.. +.+. -
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~ 197 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGES 197 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccC
Confidence 689999999999999999999999999 99999998744321111 11122334445 4 899999999974 1111 1
Q ss_pred hcCHHHhhccCCCcEEEEcCCC
Q 007040 235 IINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgRG 256 (620)
.+..+ .++++.+++++.-.
T Consensus 198 pi~~~---~l~~~~~v~DlvY~ 216 (282)
T 3fbt_A 198 PVDKE---VVAKFSSAVDLIYN 216 (282)
T ss_dssp SSCHH---HHTTCSEEEESCCS
T ss_pred CCCHH---HcCCCCEEEEEeeC
Confidence 23332 24556666665443
No 206
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.01 E-value=0.00089 Score=68.99 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=63.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---cccc------CCc-eecCCHHhhhcCCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---VTFP------SAA-RRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---~~~~------~g~-~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
++|+|||.|.||..+|..|...|+ +|..||+...... .... ... ....+. +.+..||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HHhCCCCEEEEcCCCCC
Confidence 479999999999999999998898 9999998753111 0000 011 111344 56889999999995432
Q ss_pred h-----------hHhhcC--HHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 231 E-----------TIQIIN--AECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 231 ~-----------T~~lI~--~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
. +..++. ...+....|++++|+++-+.-+....+.+.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~ 129 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQL 129 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHh
Confidence 1 212221 123344468999999766544434444444
No 207
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.97 E-value=0.00086 Score=69.49 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=51.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCccc-cCCc-eecCCHHhhhc--CCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVTF-PSAA-RRMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~-~~g~-~~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
.+|||||+|.||+.+++.+... +++|. ++|+++....... ..++ ..+.+++++++ ++|+|++++|...
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcc
Confidence 4799999999999999999875 77876 6788764332111 1233 35689999998 7999999999653
No 208
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.97 E-value=0.00027 Score=72.04 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=64.7
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---cC----C---ceecCCHHhhhcCCcEEEEcccCC
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF---PS----A---ARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---~~----g---~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+.|+++.|+|.|.||+++|..|...| +|++++|+........ .. . .....++.+.+..+|+|++++|..
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~ 204 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG 204 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCC
Confidence 67899999999999999999999999 9999999753322110 00 0 001123356678899999999965
Q ss_pred hhhH---hhcCHHHhhccCCCcEEEEcCCCh
Q 007040 230 DETI---QIINAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 230 ~~T~---~lI~~~~L~~MK~gAiLINvgRG~ 257 (620)
.... ..+. ....++++++++|+....
T Consensus 205 ~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 205 MYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp CTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred CCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 3210 0120 135678889999987643
No 209
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.94 E-value=0.0023 Score=66.60 Aligned_cols=92 Identities=20% Similarity=0.251 Sum_probs=61.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC-------cc-----ccCCceecCCHHhhhcCCcEEEEcc--c
Q 007040 163 LVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK-------VT-----FPSAARRMDTLNDLLAASDVISLHC--A 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~-------~~-----~~~g~~~~~sL~eLL~~sDvVil~l--P 227 (620)
++|+|||.|.+|..+|..|...|+ .|..||....... .. ....+....++ +.++.||+|++++ |
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFT 83 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 589999999999999999998888 9999998764222 00 01112233567 7789999999998 5
Q ss_pred CChhh------H--------hhcC--HHHhhccCCCcEEEEcCC
Q 007040 228 VTDET------I--------QIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 228 lT~~T------~--------~lI~--~~~L~~MK~gAiLINvgR 255 (620)
..+.. + .++- .+.+....|++++|+++-
T Consensus 84 ~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 84 KAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp SCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44321 1 1110 112333358999998754
No 210
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.94 E-value=0.00093 Score=69.02 Aligned_cols=69 Identities=10% Similarity=0.029 Sum_probs=52.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhc--CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLA--ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~--~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+.+++.++.. +++|. ++|++....... ...++ ..+.++++++. +.|+|++++|....
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGH 80 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHH
Confidence 5799999999999999999875 77876 678876443211 11233 35679999998 79999999996643
No 211
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.92 E-value=0.00071 Score=69.52 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=65.7
Q ss_pred cEEEEEeCChhhH-HHHHHHhhC-CCEEEEECCCCCCCCccc-cCCcee-cCCHHhhh-cCCcEEEEcccCChhhHhhcC
Q 007040 163 LVLGIVGRSASAR-ALATRSLSF-KMSVLYFDVPEGKGKVTF-PSAARR-MDTLNDLL-AASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 163 ktVGIIGlG~IG~-~vA~~Lkaf-G~~V~~~dr~~~~~~~~~-~~g~~~-~~sL~eLL-~~sDvVil~lPlT~~T~~lI~ 237 (620)
.+|||||+|.||+ .+++.+... +++|+++|++........ ..++.. ..+..+++ .++|+|++++|.... .-+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h--~~~- 79 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVH--STL- 79 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGH--HHH-
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhH--HHH-
Confidence 4799999999998 499988765 788889998864332111 112222 33444455 689999999994422 111
Q ss_pred HHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCcc
Q 007040 238 AECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 238 ~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I~ 274 (620)
....++.|. +++.- .--.+-+..+|.++.++..+.
T Consensus 80 --~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 80 --AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp --HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 123344454 66653 222345566688887766554
No 212
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.92 E-value=0.0011 Score=69.19 Aligned_cols=69 Identities=12% Similarity=0.013 Sum_probs=51.5
Q ss_pred CcEEEEEeCChhhH-HHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCceecCCHHhhhc--CCcEEEEcccCCh
Q 007040 162 GLVLGIVGRSASAR-ALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 162 GktVGIIGlG~IG~-~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
-.+|||||+|.||+ .+++.++.. +++|. ++|++....... ...++..+.+++++++ +.|+|++++|...
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVL 101 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGG
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHH
Confidence 46799999999999 789988877 78876 678876433211 1124555689999997 4899999999653
No 213
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.91 E-value=0.00048 Score=72.17 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=53.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
.+|||||+|.||+..++.++.. +++|. ++|++..........++..+.+++++++ +.|+|++++|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 5799999999999999999877 78876 5688764433222345566789999998 7899999999653
No 214
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.89 E-value=0.0015 Score=67.41 Aligned_cols=106 Identities=11% Similarity=0.126 Sum_probs=66.8
Q ss_pred cEEEEEeCChhhH-HHHHHHhhCCCEE-EEECCCCCCCCcccc-C-CceecCCHHhhhc--CCcEEEEcccCChhhHhhc
Q 007040 163 LVLGIVGRSASAR-ALATRSLSFKMSV-LYFDVPEGKGKVTFP-S-AARRMDTLNDLLA--ASDVISLHCAVTDETIQII 236 (620)
Q Consensus 163 ktVGIIGlG~IG~-~vA~~LkafG~~V-~~~dr~~~~~~~~~~-~-g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI 236 (620)
.+|||||+|.+|. .++..++..|++| .++|+++........ . +...+.+++++++ +.|+|++++|......
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~--- 81 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE--- 81 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH---
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH---
Confidence 4799999999996 6788777678986 578988755432111 1 3445679999997 5899999999553211
Q ss_pred CHHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCc
Q 007040 237 NAECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 237 ~~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I 273 (620)
-.+..|+.|. +|+.- ---.+-+.++|+++.++..+
T Consensus 82 --~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (336)
T 2p2s_A 82 --LALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGR 118 (336)
T ss_dssp --HHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 1223344454 55542 22233445556666655443
No 215
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.89 E-value=0.00044 Score=71.98 Aligned_cols=68 Identities=19% Similarity=0.229 Sum_probs=52.8
Q ss_pred CcEEEEEeCChhhHHHHHHHhhC--CCEEE-EECCCCCCCCcc-ccCCceecCCHHhhhc--CCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSF--KMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLLA--ASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~Lkaf--G~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL~--~sDvVil~lPlT 229 (620)
-.+|||||+|.||+..++.+... +++|+ ++|++....... ...++..+.+++++++ +.|+|++++|..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 35799999999999999999877 78866 788876443211 1124566789999997 799999999955
No 216
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.89 E-value=0.0024 Score=64.80 Aligned_cols=98 Identities=10% Similarity=0.054 Sum_probs=71.2
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEE-EEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSV-LYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAE 239 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V-~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~ 239 (620)
..++|++||+|+||+.+++. . ++++ .+|+ .... .. ++....+++++++++|+|+-|.+.. -+.+.
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~g--el--gv~a~~d~d~lla~pD~VVe~A~~~-----av~e~ 76 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISK--DI--PGVVRLDEFQVPSDVSTVVECASPE-----AVKEY 76 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCC--CC--SSSEECSSCCCCTTCCEEEECSCHH-----HHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cccc--cc--CceeeCCHHHHhhCCCEEEECCCHH-----HHHHH
Confidence 57889999999999999998 4 8865 5666 2222 12 5556678999999999999887422 23333
Q ss_pred HhhccCCCcEEEEcCCChhhcH---HHHHHHHHcCC
Q 007040 240 CLQHIKPGAFLVNTGSSQLLDD---CAVKQLLIDGT 272 (620)
Q Consensus 240 ~L~~MK~gAiLINvgRG~vVDe---~AL~~AL~~G~ 272 (620)
....++.|.-+|-++-|.+.|. +.|.++.+.|.
T Consensus 77 ~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 77 SLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp HHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 5667889999999999988886 44555555554
No 217
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.86 E-value=0.00069 Score=70.72 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=51.8
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCC---CCCcc---cc--CC--c--eecCC---HHhhhcCCcEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEG---KGKVT---FP--SA--A--RRMDT---LNDLLAASDVI 222 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~---~~~~~---~~--~g--~--~~~~s---L~eLL~~sDvV 222 (620)
.+.|+++.|+|.|.+|+++|..|...|+ +|++++|+.. ..... +. .+ + ...++ +.+.+..+|+|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 4789999999999999999999999999 9999999832 11100 00 00 1 11222 55667899999
Q ss_pred EEcccCC
Q 007040 223 SLHCAVT 229 (620)
Q Consensus 223 il~lPlT 229 (620)
|+++|..
T Consensus 231 INaTp~G 237 (315)
T 3tnl_A 231 TNATGVG 237 (315)
T ss_dssp EECSSTT
T ss_pred EECccCC
Confidence 9999964
No 218
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0028 Score=68.15 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=67.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC--------CEEEEECCCCCCCC-------------------ccccCCceecCCHHhh
Q 007040 163 LVLGIVGRSASARALATRSLSFK--------MSVLYFDVPEGKGK-------------------VTFPSAARRMDTLNDL 215 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG--------~~V~~~dr~~~~~~-------------------~~~~~g~~~~~sL~eL 215 (620)
.+|+|||.|..|.++|..|...| .+|..|.+.+.... ..++..+....+|.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 37999999999999999997544 46888876542100 1233445666789999
Q ss_pred hcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 216 LAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 216 L~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
+..||+|++++|. ...+.++. +....++++..+|+++-|
T Consensus 115 l~~ad~ii~avPs-~~~r~~l~-~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 115 VKDVDIIVFNIPH-QFLPRICS-QLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp HTTCSEEEECSCG-GGHHHHHH-HHTTTSCTTCEEEECCCS
T ss_pred HhcCCEEEEECCh-hhhHHHHH-HhccccCCCceeEEeccc
Confidence 9999999999994 34444443 344567899999999877
No 219
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.82 E-value=0.0011 Score=71.37 Aligned_cols=151 Identities=14% Similarity=0.179 Sum_probs=99.0
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC----CC---CCc---cccCC---ceecCCHHhhhcCCcEEEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE----GK---GKV---TFPSA---ARRMDTLNDLLAASDVISL 224 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~----~~---~~~---~~~~g---~~~~~sL~eLL~~sDvVil 224 (620)
.+...+|.|+|.|..|..+|+.+.++|. +|+.+|++. .. ... .+... .....+|.+++..+|+++=
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG 264 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIG 264 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEe
Confidence 5788999999999999999999999999 999999874 11 110 01000 0013469999999999886
Q ss_pred cccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCC-cceeEeecCCCCCCCCccccCCCcEEEcCCC
Q 007040 225 HCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGT-LAGCALDGAEGPQWMEAWVREMPNVLILPRS 303 (620)
Q Consensus 225 ~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~-I~GAaLDV~E~P~~~~spL~~~pNVIlTPHi 303 (620)
.- +-++|.++.++.|+++++++.++.... |..=.++.+.|. |.+-+ -...| -+..|+++=|=+
T Consensus 265 ~S-----apgl~T~EmVk~Ma~~pIIfalsNPt~--E~~pe~a~~~g~~i~atG--rs~~p-------~Q~NN~~~FPgi 328 (398)
T 2a9f_A 265 VS-----APGVLKAEWISKMAARPVIFAMANPIP--EIYPDEALEAGAYIVGTG--RSDFP-------NQINNVLAFPGI 328 (398)
T ss_dssp CC-----STTCCCHHHHHTSCSSCEEEECCSSSC--SSCHHHHHTTTCSEEEES--CTTSS-------SBCCGGGTHHHH
T ss_pred cC-----CCCCCCHHHHHhhCCCCEEEECCCCCc--cCCHHHHHHhCCeEEEeC--CCCCC-------CcCCceeEcchH
Confidence 63 248999999999999999999998653 222223333344 22111 11112 145677777753
Q ss_pred CCCcHH-----HHHHHHHHHHHHHHHH
Q 007040 304 ADYSEE-----VWMEIRDKAISVLQTF 325 (620)
Q Consensus 304 Ag~T~e-----a~~~~~~~a~enL~~~ 325 (620)
+-..-. ..++|.-.+++.|..+
T Consensus 329 ~~Gal~~~a~~I~d~m~~aAa~alA~~ 355 (398)
T 2a9f_A 329 FRGALDARAKTITVEMQIAAAKGIASL 355 (398)
T ss_dssp HHHHHHHTCSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCcCCCHHHHHHHHHHHHhc
Confidence 322111 2356666777777765
No 220
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.80 E-value=0.0019 Score=70.35 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=77.8
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC---EEEEEC----CC--CCCCCc---ccc------C--Cc-eecCCHHhhhc
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM---SVLYFD----VP--EGKGKV---TFP------S--AA-RRMDTLNDLLA 217 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~---~V~~~d----r~--~~~~~~---~~~------~--g~-~~~~sL~eLL~ 217 (620)
.+.++++.|+|.|..|++++..|...|. +|+++| |+ ...... ... . .. ....+|.+.+.
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~ 262 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALK 262 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHT
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhc
Confidence 4678999999999999999999999998 899999 76 222111 000 0 00 02356889999
Q ss_pred CCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCC
Q 007040 218 ASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGT 272 (620)
Q Consensus 218 ~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~ 272 (620)
.+|+|+.+.|..+ +++..+.++.|+++.++++++... .+.-+.+|.+.|.
T Consensus 263 ~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 263 DADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp TCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred cCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 9999999998632 466667788899999999995443 3444444444443
No 221
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.76 E-value=0.0025 Score=66.25 Aligned_cols=68 Identities=12% Similarity=0.093 Sum_probs=51.2
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhcC--CcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLAA--SDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~~--sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+. .+..++.. +++|. ++|+++..... ...+...+.++++++.. .|+|++++|....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 80 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTH 80 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSCCEESCHHHHHHCSSCCEEEECSCTTTH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 57999999999997 78888766 78876 67887643321 12245567899999986 8999999997643
No 222
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.76 E-value=0.0023 Score=67.20 Aligned_cols=67 Identities=10% Similarity=0.079 Sum_probs=50.3
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
.+|||||+|.||+. .+..++.. +++|. ++|++...... ...+...+.+++++++ +.|+|++++|...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPNAT 79 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCGGG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCChHH
Confidence 47999999999997 77777766 78875 67887643221 1124556789999998 7899999999653
No 223
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.76 E-value=0.0027 Score=65.86 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=48.8
Q ss_pred cEEEEEeCChhhHH-HHH-HHh-hCCCEEE-EECCCCCCCCccc-cCCceecCCHHhhhcC--CcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARA-LAT-RSL-SFKMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLLAA--SDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~-~Lk-afG~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~--sDvVil~lPlT~ 230 (620)
.+|||||+|.||+. .+. .+. .-+++|. ++|+++....... ..+...+.+++++++. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADS 77 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHH
Confidence 46999999999996 455 334 3478877 7888764432111 1245567899999987 899999999654
No 224
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.75 E-value=0.0041 Score=62.60 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=56.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEE-ECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLY-FDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~-~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..++....++++++ .+|+|+-..+. ..+... +
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~~~-----~ 71 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFSNP-NLLFPL-----L 71 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSCH-HHHHHH-----H
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeCCh-HHHHHH-----H
Confidence 5799999999999999999877557664 7877542 23455567899988 99998844431 222222 3
Q ss_pred hccCCCcEEEEcCCC
Q 007040 242 QHIKPGAFLVNTGSS 256 (620)
Q Consensus 242 ~~MK~gAiLINvgRG 256 (620)
. ++.|.-+|....|
T Consensus 72 ~-l~~g~~vVigTTG 85 (243)
T 3qy9_A 72 D-EDFHLPLVVATTG 85 (243)
T ss_dssp T-SCCCCCEEECCCS
T ss_pred H-HhcCCceEeCCCC
Confidence 3 6777777765566
No 225
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.71 E-value=0.004 Score=63.94 Aligned_cols=106 Identities=11% Similarity=0.097 Sum_probs=70.0
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHhhcC
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI~ 237 (620)
..+|+|+|+ |++|+.+++.++..|++++ .+||... .. ...+...+.+++++.. ..|++++++|.. ....++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~- 81 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-GT--THLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSI- 81 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-TC--EETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-cc--eeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHH-
Confidence 467999999 9999999999998899844 6676532 11 1245666789999998 899999999954 222332
Q ss_pred HHHhhccCCCcEEEEcCCCh-hhcHHHHHHHHHcCCcc
Q 007040 238 AECLQHIKPGAFLVNTGSSQ-LLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 238 ~~~L~~MK~gAiLINvgRG~-vVDe~AL~~AL~~G~I~ 274 (620)
.+.++.=. . .+|..+-|- .-+...|.++.++..+.
T Consensus 82 ~ea~~~Gi-~-~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 82 LEAIDAGI-K-LIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHHHHTTC-S-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHCCC-C-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 23333222 2 234444442 34566788888776553
No 226
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.69 E-value=0.0049 Score=71.28 Aligned_cols=164 Identities=16% Similarity=0.103 Sum_probs=103.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCC----------------------ccccCCceecCCHHhhhcCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGK----------------------VTFPSAARRMDTLNDLLAAS 219 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~----------------------~~~~~g~~~~~sL~eLL~~s 219 (620)
=++|||||.|.||..||..+...|++|+.+|+++.... ...........+++ .+++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 36899999999999999999999999999998763211 00001122334454 47899
Q ss_pred cEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEE
Q 007040 220 DVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLI 299 (620)
Q Consensus 220 DvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIl 299 (620)
|+||=++|..-+.+.-+=+++=+.++|++||-.-.++ +....|.++++ ..-..+++=.|- |++ --||. -||-
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfn-P~~-~m~LV---Evi~ 466 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFS-PAH-VMRLL---EVIP 466 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCS-STT-TCCEE---EEEE
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccC-CCC-CCceE---EEec
Confidence 9999999999998887767777789999998765554 44445555543 334445554443 332 11222 3666
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCccCC
Q 007040 300 LPRSADYSEEVWMEIRDKAISVLQTFFFDGVIPKNAISDTEGCENE 345 (620)
Q Consensus 300 TPHiAg~T~ea~~~~~~~a~enL~~~L~~G~~p~nvVn~~~~y~~~ 345 (620)
+++++ +++...+ .+-.+. -|+.|+ +|++..|++.+
T Consensus 467 g~~Ts---~e~~~~~----~~~~~~---lgK~pV-~vkd~pGFi~N 501 (742)
T 3zwc_A 467 SRYSS---PTTIATV----MSLSKK---IGKIGV-VVGNCYGFVGN 501 (742)
T ss_dssp CSSCC---HHHHHHH----HHHHHH---TTCEEE-ECCCSTTTTHH
T ss_pred CCCCC---HHHHHHH----HHHHHH---hCCCCc-ccCCCCCccHH
Confidence 66554 3333332 222222 366665 45666666543
No 227
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.66 E-value=0.0013 Score=68.96 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=50.7
Q ss_pred CcEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccccC--CceecCCHHhhhcCC--cEEEEcccCC
Q 007040 162 GLVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTFPS--AARRMDTLNDLLAAS--DVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~--g~~~~~sL~eLL~~s--DvVil~lPlT 229 (620)
..+|||||+|.||+. +++.+... +++|. ++|+++......... +...+.++++++++. |+|++++|..
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 79 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQ 79 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcH
Confidence 357999999999995 88988876 78876 779876443322111 345578999999855 9999999944
No 228
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.63 E-value=0.0013 Score=66.05 Aligned_cols=93 Identities=18% Similarity=0.156 Sum_probs=64.6
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCC-------------------CCc------cc-cC-Ccee
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGK-------------------GKV------TF-PS-AARR 208 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~-------------------~~~------~~-~~-g~~~ 208 (620)
...|.+++|.|||.|.+|..+|+.|...|. +|..+|+..-. .+. .. +. .+..
T Consensus 26 q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~ 105 (249)
T 1jw9_B 26 QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP 105 (249)
T ss_dssp HHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence 356899999999999999999999999998 89999987511 000 00 00 0111
Q ss_pred ----c--CCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 209 ----M--DTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 209 ----~--~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
. .++.+++..+|+|+.+++ +.+++.+++...... +..+|+.
T Consensus 106 ~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 106 VNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp ECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred EeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 135677889999999986 567888887765553 3445554
No 229
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.62 E-value=0.00096 Score=64.56 Aligned_cols=91 Identities=18% Similarity=0.119 Sum_probs=58.4
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCce-------ecCCHHhh-hcCCcEEEEcccCChhhH
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAAR-------RMDTLNDL-LAASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~-------~~~sL~eL-L~~sDvVil~lPlT~~T~ 233 (620)
++|.|+|+|.+|+.+|+.|...|++|+++|+++....... ..+.. ....|.++ +..+|+|++++|....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN- 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH-
Confidence 4699999999999999999999999999998764332111 01111 11224444 67899999999866443
Q ss_pred hhcCHHHhhccCCCcEEEEcCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgR 255 (620)
++-......+.+...+|-..+
T Consensus 80 -~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 80 -LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -HHHHHHHHHTSCCCEEEECCC
T ss_pred -HHHHHHHHHHcCCCeEEEEEe
Confidence 332333444444555554433
No 230
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.58 E-value=0.0014 Score=68.37 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=51.9
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCC---CCcc---cc--CC----ceecCCH---HhhhcCCcEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGK---GKVT---FP--SA----ARRMDTL---NDLLAASDVI 222 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~---~~~~---~~--~g----~~~~~sL---~eLL~~sDvV 222 (620)
.+.|+++.|+|.|.+|++++..|...|+ +|++++|+... .... +. .+ .....++ .+.+..+|+|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 3689999999999999999999999999 89999998322 1100 00 01 1122344 5567889999
Q ss_pred EEcccCC
Q 007040 223 SLHCAVT 229 (620)
Q Consensus 223 il~lPlT 229 (620)
|+++|..
T Consensus 225 INaTp~G 231 (312)
T 3t4e_A 225 TNGTKVG 231 (312)
T ss_dssp EECSSTT
T ss_pred EECCcCC
Confidence 9999975
No 231
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.58 E-value=0.0026 Score=66.32 Aligned_cols=107 Identities=10% Similarity=0.090 Sum_probs=69.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEE-EEECCCCCCCCccc-cCC----ceecCCHHhhhc--CCcEEEEcccCChhhH
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSV-LYFDVPEGKGKVTF-PSA----ARRMDTLNDLLA--ASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V-~~~dr~~~~~~~~~-~~g----~~~~~sL~eLL~--~sDvVil~lPlT~~T~ 233 (620)
.+|||||+|.||+.+++.+... ++++ .++|++........ ..+ ...+.+++++++ +.|+|++++|....
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h-- 84 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLH-- 84 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGH--
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHH--
Confidence 4799999999999999998875 6776 47788764322110 112 345678999997 58999999995422
Q ss_pred hhcCHHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCcc
Q 007040 234 QIINAECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 234 ~lI~~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I~ 274 (620)
. .-....++.|. +|+.- ---.+-+.++|.++.++..+.
T Consensus 85 ~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 85 V---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp H---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred H---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 1 11234456665 44432 123344556788888776654
No 232
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.57 E-value=0.0026 Score=65.97 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=59.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCc---cccC-------CceecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKV---TFPS-------AARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~---~~~~-------g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
-++|+|||.|.||.++|..|+..|. +|..+|++...... .... ......+..+.++.||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3689999999999999999986665 89999987531110 0000 1111123456789999999998754
Q ss_pred hh-----------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 230 DE-----------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 230 ~~-----------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
.. +..++. .+.+....|++++|+++-
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 21 111110 122333468888998755
No 233
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.55 E-value=0.0034 Score=66.13 Aligned_cols=67 Identities=18% Similarity=0.280 Sum_probs=49.0
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce--ecC---CHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR--RMD---TLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~--~~~---sL~eLL~~sDvVil~l 226 (620)
+.|++|+|||.|.+|+.+++.++.+|++|+++|+++........+... .+. .+.++++.+|+|+...
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~ 83 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEF 83 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeecc
Confidence 689999999999999999999999999999999876432211111111 112 3667888899985543
No 234
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.54 E-value=0.0035 Score=64.66 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=62.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC--------cc--ccC--CceecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK--------VT--FPS--AARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~--------~~--~~~--g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|+|||.|.+|.++|..|...|. +|..||+.....+ .. +.. .+....+ .+.+..||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999988787 9999998763321 00 111 1222345 7889999999999764
Q ss_pred Chh-----------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 229 TDE-----------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 229 T~~-----------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
... +..++. .+.+....|++++|+++-
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 311 112221 124555689999999984
No 235
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.52 E-value=0.0093 Score=61.92 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=68.3
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCc---cccC------CceecCCHHhhhcCCcEEEEcccCCh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKV---TFPS------AARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~---~~~~------g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
.++|+|||.|.+|..+|..|...|. +|..||........ .... ......+-.+.+..||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 4689999999999999999998887 99999987643220 0011 11111123567899999999998532
Q ss_pred h---h--------HhhcC--HHHhhccCCCcEEEEcCCChhhcHHHHHHH--HHcCCccee--Eeec
Q 007040 231 E---T--------IQIIN--AECLQHIKPGAFLVNTGSSQLLDDCAVKQL--LIDGTLAGC--ALDG 280 (620)
Q Consensus 231 ~---T--------~~lI~--~~~L~~MK~gAiLINvgRG~vVDe~AL~~A--L~~G~I~GA--aLDV 280 (620)
. + ..++- .+.+....|++++|+++-.-=+-...+.+. +...++.|. .||+
T Consensus 87 k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~ 153 (318)
T 1y6j_A 87 KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDS 153 (318)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHH
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchHH
Confidence 1 1 11110 123333478999999754322333333333 223355444 4663
No 236
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.49 E-value=0.0033 Score=60.78 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=51.6
Q ss_pred ceeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc-e--e---cCCHHhhhcCCcEEEEcccCC
Q 007040 157 MRRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA-R--R---MDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 157 ~~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~-~--~---~~sL~eLL~~sDvVil~lPlT 229 (620)
...+.|++|.|.|. |.||+.+++.|...|++|++++|+..........++ . . .+.+.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 45789999999997 999999999999999999999998643321111111 1 0 156778888999999888755
No 237
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.47 E-value=0.0037 Score=65.15 Aligned_cols=94 Identities=13% Similarity=0.209 Sum_probs=61.8
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---cccc-------CCceec-CCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---VTFP-------SAARRM-DTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---~~~~-------~g~~~~-~sL~eLL~~sDvVil~lPlT 229 (620)
++|+|||.|.||..+|..+...|+ +|..+|....... .... ...... .+..+.+.+||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 579999999999999999987776 9999999774321 0000 011111 24567889999999998643
Q ss_pred hh-----------hHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 230 DE-----------TIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 230 ~~-----------T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
.. |..++. .+.+....|++++|+++-.
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 120 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 120 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence 21 222221 1244455789999999853
No 238
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.47 E-value=0.003 Score=63.36 Aligned_cols=94 Identities=17% Similarity=0.127 Sum_probs=64.8
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC---cc----------------------ccCC--cee
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK---VT----------------------FPSA--ARR 208 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~---~~----------------------~~~g--~~~ 208 (620)
...|.+++|.|||+|.+|..+|+.|...|. ++..+|...-... .. .... +..
T Consensus 23 q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~ 102 (251)
T 1zud_1 23 QQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA 102 (251)
T ss_dssp HHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 357899999999999999999999999998 8888886531100 00 0000 111
Q ss_pred ------cCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 209 ------MDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 209 ------~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.+++.+++..+|+|+.++. +.+++.+++...... +.-+|..+
T Consensus 103 ~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 103 LQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred EeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 1235677888999999987 667888888776653 33456543
No 239
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.43 E-value=0.036 Score=57.69 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=70.2
Q ss_pred ecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
+.|.+|++||=| ++..+++..+..||++|.+..|..-.....+ ..| +....++++.++.+|||..-.
T Consensus 146 l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 146 LRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred cCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence 689999999986 9999999999999999999998764332111 122 445689999999999999843
Q ss_pred cC-------Chh-----hHhhcCHHHhhccCCCcEEEEcC
Q 007040 227 AV-------TDE-----TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 227 Pl-------T~~-----T~~lI~~~~L~~MK~gAiLINvg 254 (620)
=. .++ ..--++.+.++.+||+++|.-+.
T Consensus 226 w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 226 WTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp SSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred eecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 21 011 12345888888888888888764
No 240
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.43 E-value=0.0061 Score=62.24 Aligned_cols=96 Identities=13% Similarity=0.256 Sum_probs=60.5
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---ccccC------Cc--eecCCHHhhhcCCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---VTFPS------AA--RRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---~~~~~------g~--~~~~sL~eLL~~sDvVil~lP 227 (620)
..++|+|||.|.||..+|..|...|+ +|..+|++..... ..... .. ....+. +.+..||+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCC
Confidence 34689999999999999999998898 9999998752211 00001 11 111243 56789999999995
Q ss_pred CChh---h--------HhhcC--HHHhhccCCCcEEEEcCCCh
Q 007040 228 VTDE---T--------IQIIN--AECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 228 lT~~---T--------~~lI~--~~~L~~MK~gAiLINvgRG~ 257 (620)
.... + ..++. ...+....+++++|++.-|-
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 3321 1 11110 11223346889999987664
No 241
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.42 E-value=0.0083 Score=61.91 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=59.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCc---cc---------cCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKV---TF---------PSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~---~~---------~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
++|+|||.|.||..+|..+...|+ +|..+|........ .. ...+....++ +.++.||+|+++.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 579999999999999999998886 99999987632210 00 0112223566 6789999999998543
Q ss_pred hh-----------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 230 DE-----------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 230 ~~-----------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
.. +..++- .+.+....|++++|+++-
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 21 111110 122334458889888754
No 242
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.40 E-value=0.0028 Score=61.80 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=59.5
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce-------ecCCHHhh-hcCCcEEEEcccCChhhH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR-------RMDTLNDL-LAASDVISLHCAVTDETI 233 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~-------~~~sL~eL-L~~sDvVil~lPlT~~T~ 233 (620)
.+++.|+|+|.+|+.+|+.|...|+ |+++|+++....... .+.. ..+.|.++ +..+|+|++++|....
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~-- 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE-- 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH--
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH--
Confidence 4579999999999999999999999 999998764322111 1211 11224444 7889999999986533
Q ss_pred hhcCHHHhhccCCCcEEEEcCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgR 255 (620)
+++-......+.++..+|--.+
T Consensus 85 n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEECS
T ss_pred HHHHHHHHHHHCCCCeEEEEEC
Confidence 3444455666777744444333
No 243
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.39 E-value=0.0017 Score=67.18 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=51.3
Q ss_pred cEEEEEeCChhhHHHHHHHh-h-CCCEEE-EECCCCCCCCcc-ccCC--ceecCCHHhhhcC--CcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSL-S-FKMSVL-YFDVPEGKGKVT-FPSA--ARRMDTLNDLLAA--SDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lk-a-fG~~V~-~~dr~~~~~~~~-~~~g--~~~~~sL~eLL~~--sDvVil~lPlT~ 230 (620)
.+|||||+|.||+..++.+. . -+++|. ++|++....... ...+ ...+.++++++++ .|+|++++|...
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 47999999999999999998 5 478866 678876433211 1123 4567899999987 899999999653
No 244
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.38 E-value=0.0061 Score=59.20 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=61.3
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCC-CEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccCChh
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFK-MSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAVTDE 231 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPlT~~ 231 (620)
..++|.|.| .|.||+.+++.|...| ++|++++|+..........++ ...+++.+++..+|+|+.+......
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 457899999 7999999999999999 899999988644332111111 1223466778899999988765432
Q ss_pred hHhhcCHHHhhccCC--CcEEEEcCCCh
Q 007040 232 TIQIINAECLQHIKP--GAFLVNTGSSQ 257 (620)
Q Consensus 232 T~~lI~~~~L~~MK~--gAiLINvgRG~ 257 (620)
. ......+..|+. ...||+++...
T Consensus 102 ~--~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 102 D--IQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp H--HHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred h--HHHHHHHHHHHHcCCCEEEEEecce
Confidence 1 111233444422 23677777643
No 245
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.38 E-value=0.0033 Score=65.72 Aligned_cols=67 Identities=12% Similarity=0.156 Sum_probs=50.9
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhcC--CcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLAA--SDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~~--sDvVil~lPlT~ 230 (620)
.+|||||+|.||+. .+..++.. +++|. ++|++.......+ .+...+.+++++++. .|+|++++|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~-~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERY-PQASIVRSFKELTEDPEIDLIVVNTPDNT 77 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTC-TTSEEESCSHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhC-CCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 57999999999997 77777766 78875 6788765432222 145667899999987 899999999653
No 246
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.38 E-value=0.0023 Score=66.90 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=52.1
Q ss_pred CcEEEEEeCChhhHHHHHHHh-h-CCCEEE-EECCCCCCCCccc-cCC--ceecCCHHhhhcC--CcEEEEcccCCh
Q 007040 162 GLVLGIVGRSASARALATRSL-S-FKMSVL-YFDVPEGKGKVTF-PSA--ARRMDTLNDLLAA--SDVISLHCAVTD 230 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~Lk-a-fG~~V~-~~dr~~~~~~~~~-~~g--~~~~~sL~eLL~~--sDvVil~lPlT~ 230 (620)
-.+|||||+|.||+..++.+. . -+++|. ++|++........ ..+ ...+.++++++.. .|+|++++|...
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 357999999999999999998 5 478876 6898875433111 123 4567899999984 899999999654
No 247
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.36 E-value=0.0082 Score=62.08 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=59.7
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCCcc-----c-cCCceecCCHHhhhcCCcEEEEcccCC----
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGKVT-----F-PSAARRMDTLNDLLAASDVISLHCAVT---- 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~-----~-~~g~~~~~sL~eLL~~sDvVil~lPlT---- 229 (620)
.++|+|||.|.||..+|..+...|+ +|..+|......... . ...+....++ +.++.||+|+++....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3789999999999999999987788 999999876411100 0 0123333567 6689999999997321
Q ss_pred ------hhhHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 230 ------DETIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 230 ------~~T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
.++..++- ...+....|+++||+++-.
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence 11222221 1123333589999998773
No 248
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.36 E-value=0.0031 Score=64.29 Aligned_cols=67 Identities=9% Similarity=0.099 Sum_probs=48.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcccc-CCceecCCHHhhhcCCcEEEEcccCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFP-SAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~-~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
.++++.|||.|.+|++++..|...|+ +|++++|+......... .+......+. +..+|+||+++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 46789999999999999999999998 89999998643221110 0111111222 46899999999976
No 249
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.36 E-value=0.0084 Score=62.69 Aligned_cols=95 Identities=16% Similarity=0.326 Sum_probs=62.9
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC-------cc-----ccCCceecCCHHhhhcCCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK-------VT-----FPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~-------~~-----~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
..++|+|||.|.+|..+|..|...|+ +|..||+...... .. ....+....+. +.+..||+|+++.+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 46789999999999999999998888 9999999874321 00 01122223455 78899999999975
Q ss_pred CC--hh-h--------HhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 228 VT--DE-T--------IQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 228 lT--~~-T--------~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
.. +. | ..++- ...+....|++++|+++-.
T Consensus 85 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 85 VPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred cCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 32 11 1 11111 1233344689999998854
No 250
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.36 E-value=0.0028 Score=69.28 Aligned_cols=106 Identities=14% Similarity=0.196 Sum_probs=70.9
Q ss_pred cCcEEEEEeCChh--hHHHHHHHhh----CCCEEEEECCCCCCCC------c---cccCCceecCCHHhhhcCCcEEEEc
Q 007040 161 RGLVLGIVGRSAS--ARALATRSLS----FKMSVLYFDVPEGKGK------V---TFPSAARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 161 ~GktVGIIGlG~I--G~~vA~~Lka----fG~~V~~~dr~~~~~~------~---~~~~g~~~~~sL~eLL~~sDvVil~ 225 (620)
..++|+|||.|.+ |..++..+.. .| +|..||+.....+ . .....+....+++++++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 3578999999998 4788877764 46 9999998753211 0 0111234567899999999999999
Q ss_pred ccCC-----------hhhHhhcCH------------------------HHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 226 CAVT-----------DETIQIINA------------------------ECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 226 lPlT-----------~~T~~lI~~------------------------~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
++.. |.-.|+... +.+....|++++||++-.-=+-..++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9743 223333211 23445568999999988665555555544
No 251
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.35 E-value=0.012 Score=54.76 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=49.6
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce-------ecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR-------RMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~-------~~~sL~eLL~~sDvVil~lPlT 229 (620)
+++|.|+|. |.||+.+++.|...|++|++++|+..........++. ..+++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999997 9999999999999999999999876433211111111 1234667788899999888754
No 252
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.31 E-value=0.0067 Score=57.98 Aligned_cols=91 Identities=10% Similarity=0.100 Sum_probs=61.1
Q ss_pred cEEEEEe-CChhhHHHHHHHh-hCCCEEEEECCCCC-CCCcc--ccCCc-------eecCCHHhhhcCCcEEEEcccCCh
Q 007040 163 LVLGIVG-RSASARALATRSL-SFKMSVLYFDVPEG-KGKVT--FPSAA-------RRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lk-afG~~V~~~dr~~~-~~~~~--~~~g~-------~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
+++.|.| .|.||+.+++.|. ..|++|++++|+.. ..... ...++ ...+++.+++..+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 5699999 6999999999999 89999999998865 32211 11111 122356678899999999987642
Q ss_pred hhHhhcCHHHhhccCC-C-cEEEEcCCCh
Q 007040 231 ETIQIINAECLQHIKP-G-AFLVNTGSSQ 257 (620)
Q Consensus 231 ~T~~lI~~~~L~~MK~-g-AiLINvgRG~ 257 (620)
-. ....+..|+. + ..||+++...
T Consensus 86 ~~----~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 SD----MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HH----HHHHHHHHHHTTCCEEEEEEETT
T ss_pred hh----HHHHHHHHHhcCCCeEEEEeece
Confidence 11 3444555532 2 3688887544
No 253
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.28 E-value=0.0081 Score=62.95 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=62.6
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---------ccccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---------VTFPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---------~~~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
-.+++|+|||.|.||..+|..|...|+ +|..+|....... ..+........+..+.+..||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 367889999999999999999987777 9999998653111 01111222233445778999999998754
Q ss_pred Ch---hhHh-hc--C-------HHHhhccCCCcEEEEcCCC
Q 007040 229 TD---ETIQ-II--N-------AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~---~T~~-lI--~-------~~~L~~MK~gAiLINvgRG 256 (620)
.. .|+. ++ | .+.+....|++++++++-.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 22 1221 22 1 1244455789999999753
No 254
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.28 E-value=0.0066 Score=62.93 Aligned_cols=96 Identities=13% Similarity=0.157 Sum_probs=61.6
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC----------ccccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK----------VTFPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~----------~~~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
..++|+|||.|.+|..+|..|...|. +|..||....... ...........+..+.+..||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34689999999999999999987675 9999998652111 00001111112446778999999999875
Q ss_pred Chh---hH--------hhcC--HHHhhccCCCcEEEEcCCC
Q 007040 229 TDE---TI--------QIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~~---T~--------~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
... ++ .++- .+.+....|++++|+++-.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNP 125 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 421 11 1211 1233444789999997643
No 255
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.28 E-value=0.0018 Score=69.89 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=63.8
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc--e-----ecCCHHhh-hcCCcEEEEcccCChhhH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA--R-----RMDTLNDL-LAASDVISLHCAVTDETI 233 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~--~-----~~~sL~eL-L~~sDvVil~lPlT~~T~ 233 (620)
+.+|.|+|+|++|+.+|+.|...|+.|+++|.++.........+. . ..+.|.++ +.++|+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 456999999999999999999999999999988643321111121 1 12234444 678999999999754443
Q ss_pred hhcCHHHhhccCCCcEEEEcCCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG 256 (620)
. -......+.|...+|--++.
T Consensus 84 ~--i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 84 Q--LTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp H--HHHHHHHHCTTCEEEEEESS
T ss_pred H--HHHHHHHhCCCCeEEEEECC
Confidence 3 34556677788666655443
No 256
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.27 E-value=0.062 Score=55.84 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=66.8
Q ss_pred ecCcEEEEEeCC---hhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCCh------
Q 007040 160 CRGLVLGIVGRS---ASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTD------ 230 (620)
Q Consensus 160 L~GktVGIIGlG---~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~------ 230 (620)
+.|.+|++||=| ++..+++..+..||++|.+..|..-... ....+ ...+++++++.+|||..-.-..+
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~-~~~~g--~~~d~~eav~~aDvvyt~~~q~er~~~~~ 221 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDE-ENTFG--TYVSMDEAVESSDVVMLLRIQNERHQSAV 221 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCT-TCSSC--EECCHHHHHHHCSEEEECCCCTTTCCSSC
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcc-hhhcC--ccCCHHHHhCCCCEEEeccchhhccccch
Confidence 689999999975 6999999999999999999988642222 11112 34689999999999988431111
Q ss_pred ---h--hHhhcCHHHhhccCCCcEEEEcC
Q 007040 231 ---E--TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 231 ---~--T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+ ..--++.+.++.+|++++|.-+.
T Consensus 222 ~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 222 SQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 1 12236888888888888887653
No 257
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.002 Score=70.52 Aligned_cols=107 Identities=13% Similarity=0.077 Sum_probs=66.8
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhC-CCEEEEECCCCCCCCcccc-CCce--e-----cCCHHhhhcCCcEEEEcccCC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSF-KMSVLYFDVPEGKGKVTFP-SAAR--R-----MDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~-~g~~--~-----~~sL~eLL~~sDvVil~lPlT 229 (620)
.+.+++|+|+|.|.||+.++..|... |++|.+++|+......... .++. . .+++.+++..+|+|++++|..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 57889999999999999999999987 7899999998643221110 1111 1 124667788999999999965
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G 271 (620)
-. .-+. ...++.|..+++++--. -+..+|.++.++.
T Consensus 100 ~~--~~v~---~a~l~~g~~vvd~~~~~-p~~~~Ll~~Ak~a 135 (467)
T 2axq_A 100 FH--PNVV---KSAIRTKTDVVTSSYIS-PALRELEPEIVKA 135 (467)
T ss_dssp GH--HHHH---HHHHHHTCEEEECSCCC-HHHHHHHHHHHHH
T ss_pred hh--HHHH---HHHHhcCCEEEEeecCC-HHHHHHHHHHHHc
Confidence 22 1121 22345677888775311 1234555555443
No 258
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.25 E-value=0.011 Score=60.63 Aligned_cols=107 Identities=13% Similarity=0.070 Sum_probs=70.9
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHhhc
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQII 236 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI 236 (620)
..++|+|+|+ |++|+.+++.++..|++++ .++|... .. ...+...+.+++++.. ..|++++++|.. .+..++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~-~~~~~~ 81 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-GM--EVLGVPVYDTVKEAVAHHEVDASIIFVPAP-AAADAA 81 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-TC--EETTEEEESSHHHHHHHSCCSEEEECCCHH-HHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-Cc--eECCEEeeCCHHHHhhcCCCCEEEEecCHH-HHHHHH
Confidence 3567999999 9999999999998899854 6676642 11 1246667788999998 899999999943 333333
Q ss_pred CHHHhhccCCCcEEEEcCCC-hhhcHHHHHHHHHcCCcc
Q 007040 237 NAECLQHIKPGAFLVNTGSS-QLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG-~vVDe~AL~~AL~~G~I~ 274 (620)
. +.++.=.+. +|..+.| ...+++.|.++.++..+.
T Consensus 82 ~-ea~~~Gi~~--vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 82 L-EAAHAGIPL--IVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp H-HHHHTTCSE--EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-HHHHCCCCE--EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 233322222 3334444 234566788888776553
No 259
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.24 E-value=0.0086 Score=62.68 Aligned_cols=96 Identities=9% Similarity=0.102 Sum_probs=62.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC-------cccc---CCceecCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK-------VTFP---SAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~-------~~~~---~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
..++|+|||.|.||..+|..|...|+ +|..+|....... ...+ ..+....+..+.+..||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35689999999999999999988787 9999998653211 0011 1122222334678999999999864
Q ss_pred C--h-hhH-hhc--C-------HHHhhccCCCcEEEEcCCC
Q 007040 229 T--D-ETI-QII--N-------AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T--~-~T~-~lI--~-------~~~L~~MK~gAiLINvgRG 256 (620)
. + .++ .++ | .+.+....|++++|+++-.
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 2 1 111 111 1 1234445789999999854
No 260
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.24 E-value=0.0043 Score=65.23 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=63.8
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---------cccc--CCceecCCHHhhhcCCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---------VTFP--SAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---------~~~~--~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
..++|+|||.|.||..+|..+...|+ +|..+|....... ..+. ..+....++++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999988787 9999998653211 0111 11223446665 899999999865
Q ss_pred CCh-----------hhHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 228 VTD-----------ETIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 228 lT~-----------~T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
... .+..++. .+.+....|++++|+++-.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 321 1222221 1244455899999999853
No 261
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.23 E-value=0.0034 Score=65.74 Aligned_cols=91 Identities=15% Similarity=0.122 Sum_probs=64.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCce---ecCC---HHhhhcCCcEEEEcccCChhhH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAAR---RMDT---LNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~---~~~s---L~eLL~~sDvVil~lPlT~~T~ 233 (620)
.|.+|.|+|.|.||..+++.++.+|++|++++++........ ..|.. ...+ +.++....|+|+.++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 688999999999999999999999999999998764432211 22321 1122 33344568999988875422
Q ss_pred hhcCHHHhhccCCCcEEEEcCCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG 256 (620)
-...+..|+++..+|++|..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 23567778888889988753
No 262
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.23 E-value=0.033 Score=57.87 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=70.9
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccC--CceecCCHHhhhcCCcEEEEcccCC------h
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPS--AARRMDTLNDLLAASDVISLHCAVT------D 230 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~--g~~~~~sL~eLL~~sDvVil~lPlT------~ 230 (620)
+.|.+|+|||= +++..+++..+..||++|.+..|..-......-. .+....++++.++.+|||..-.=.. .
T Consensus 152 l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~ 231 (301)
T 2ef0_A 152 LAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAER 231 (301)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------
T ss_pred cCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccch
Confidence 68999999998 8999999999999999999999875433211100 1445679999999999999843210 1
Q ss_pred hh------HhhcCHHHhhccCCCcEEEEcC
Q 007040 231 ET------IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 231 ~T------~~lI~~~~L~~MK~gAiLINvg 254 (620)
.. ..-++.+.++.+||+++|.-+.
T Consensus 232 ~~~~~~~~~y~v~~e~l~~a~~~ai~mHpl 261 (301)
T 2ef0_A 232 EKRLRDFQGFQVNGELLKLLRPEGVFLHCL 261 (301)
T ss_dssp CHHHHHTTTCCBCHHHHTTSCTTCEEEECS
T ss_pred hHHHHHhhccccCHHHHHhcCCCcEEECCC
Confidence 11 1246889999999999999886
No 263
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.21 E-value=0.063 Score=55.93 Aligned_cols=95 Identities=12% Similarity=0.157 Sum_probs=67.1
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----cCCceecCCHHhhhcCCcEEEEcc----cC-
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF-----PSAARRMDTLNDLLAASDVISLHC----AV- 228 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----~~g~~~~~sL~eLL~~sDvVil~l----Pl- 228 (620)
+.|.+|+|||= +++..+++..+..||++|.+..|..-.....+ ...+....++++.++.+|||..-+ ..
T Consensus 152 l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e 231 (309)
T 4f2g_A 152 IRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFE 231 (309)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcch
Confidence 68999999986 57788888889999999999998642222111 113345679999999999999744 11
Q ss_pred --Chh-----hHhhcCHHHhhccCCCcEEEEcC
Q 007040 229 --TDE-----TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 229 --T~~-----T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.++ ...-++.+.++.+|++++|.-+.
T Consensus 232 ~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 232 AENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp ------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 000 12346888888888888888764
No 264
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.20 E-value=0.0057 Score=60.86 Aligned_cols=92 Identities=18% Similarity=0.075 Sum_probs=57.3
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cC-Ccee-cCC-HHhhhcCCcEEEEcccCChhh
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PS-AARR-MDT-LNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~-g~~~-~~s-L~eLL~~sDvVil~lPlT~~T 232 (620)
+.++.|++|.|||.|.+|...++.|...|++|+++++......... .. .+.. ... .++.+..+|+|+.+.... +.
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~-~~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQ-AV 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCT-HH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCH-HH
Confidence 3579999999999999999999999999999999998653211000 01 1111 011 234567788888665433 32
Q ss_pred HhhcCHHHhhccCCCcEEEEcC
Q 007040 233 IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvg 254 (620)
|.......+ --++||+.
T Consensus 105 ----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 105 ----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ----HHHHHHHSC-TTCEEEC-
T ss_pred ----HHHHHHHHh-CCCEEEEe
Confidence 222233334 45667753
No 265
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.19 E-value=0.005 Score=60.90 Aligned_cols=66 Identities=15% Similarity=0.150 Sum_probs=44.3
Q ss_pred cEEEEEeCChhhHHHHHH--HhhCCCEEE-EECCCCCCCCccc-cCCceecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVGRSASARALATR--SLSFKMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~--LkafG~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.+++|||.|++|+.+|+. ....|++|. ++|.++....... ...+...+++++++++.|+|++++|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999994 345688655 6687765433211 11233467899999777999999995
No 266
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.18 E-value=0.0037 Score=64.43 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=49.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC---CEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhc--CCcEEEEcccCCh
Q 007040 163 LVLGIVGRSASARALATRSLSFK---MSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLA--ASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG---~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~--~sDvVil~lPlT~ 230 (620)
.++||||+|.||+..++.++..+ ++|. ++|++....... ...++ ..+.+++++++ +.|+|++++|...
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQ 78 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 47999999999999999998664 4544 678875432211 11233 35679999998 5899999999653
No 267
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.18 E-value=0.056 Score=56.02 Aligned_cols=95 Identities=13% Similarity=0.191 Sum_probs=69.8
Q ss_pred ecCcEEEEEeC---ChhhHHHHHHHhhC-CCEEEEECCCCCCCCcc--ccCC--ceecCCHHhhhcCCcEEEEcccCCh-
Q 007040 160 CRGLVLGIVGR---SASARALATRSLSF-KMSVLYFDVPEGKGKVT--FPSA--ARRMDTLNDLLAASDVISLHCAVTD- 230 (620)
Q Consensus 160 L~GktVGIIGl---G~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~--~~~g--~~~~~sL~eLL~~sDvVil~lPlT~- 230 (620)
+.|.+|++||= |++..+++..+..| |++|.+..|..-..... ...| +....+++++++.+|||..-.=..+
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er 226 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 226 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCccccc
Confidence 68999999998 59999999999999 99999999865322211 1122 3345789999999999988654331
Q ss_pred -----hh-----HhhcCHHHhhccCCCcEEEEcC
Q 007040 231 -----ET-----IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 231 -----~T-----~~lI~~~~L~~MK~gAiLINvg 254 (620)
+- .--++.+.++.+||+++|.-+.
T Consensus 227 ~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 227 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred ccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 11 1245788888888888887763
No 268
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.18 E-value=0.0043 Score=67.53 Aligned_cols=69 Identities=12% Similarity=-0.030 Sum_probs=49.6
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc-C-Cc-------eecCCHHhhhcCCcEEEEcccCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP-S-AA-------RRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~-~-g~-------~~~~sL~eLL~~sDvVil~lPlT 229 (620)
.+++|+|+|.|.||+.+|+.|...|++|.+++++......... . +. ...+++.+++..+|+|++++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 3678999999999999999999999999999987532221110 0 11 11124567888999999999964
No 269
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.17 E-value=0.0023 Score=68.91 Aligned_cols=106 Identities=9% Similarity=0.059 Sum_probs=65.0
Q ss_pred cEEEEEeCChhhH-HHHHHHhhC-CCEE-EEECCCCCCCCccc-cCCc-----eecCCHHhhhc--CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASAR-ALATRSLSF-KMSV-LYFDVPEGKGKVTF-PSAA-----RRMDTLNDLLA--ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~-~vA~~Lkaf-G~~V-~~~dr~~~~~~~~~-~~g~-----~~~~sL~eLL~--~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+ .+++.+... +++| .++|++........ ..++ ..+.++++++. +.|+|++++|....
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhH
Confidence 5799999999997 899998875 6775 57888764322111 1122 24678999997 78999999996533
Q ss_pred hHhhcCHHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCc
Q 007040 232 TIQIINAECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I 273 (620)
... ....++.|. +|+.- ---.+-+.++|.++.++..+
T Consensus 164 ~~~-----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 202 (433)
T 1h6d_A 164 AEF-----AIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK 202 (433)
T ss_dssp HHH-----HHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHH-----HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCC
Confidence 221 223344454 45442 12233444556666655443
No 270
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.17 E-value=0.01 Score=65.27 Aligned_cols=114 Identities=16% Similarity=0.260 Sum_probs=73.1
Q ss_pred CcEEEEEeCChh--hHHHHHHHh---hC-CCEEEEECCCCCCCC------------ccccCCceecCCHHhhhcCCcEEE
Q 007040 162 GLVLGIVGRSAS--ARALATRSL---SF-KMSVLYFDVPEGKGK------------VTFPSAARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 162 GktVGIIGlG~I--G~~vA~~Lk---af-G~~V~~~dr~~~~~~------------~~~~~g~~~~~sL~eLL~~sDvVi 223 (620)
.++|+|||.|.+ |.++|..|. ++ |.+|..||+.....+ ......+....++.+.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 465566664 33 889999999763211 001122334568888899999999
Q ss_pred EcccCC---------------------hhh----------------Hhhc--CHHHhhccCCCcEEEEcCCChhhcHHHH
Q 007040 224 LHCAVT---------------------DET----------------IQII--NAECLQHIKPGAFLVNTGSSQLLDDCAV 264 (620)
Q Consensus 224 l~lPlT---------------------~~T----------------~~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL 264 (620)
+++|.. .+| ..++ -.+.+....|+|+|||++-.-=+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999741 111 0111 0134555679999999988765555666
Q ss_pred HHHHHcCCccee
Q 007040 265 KQLLIDGTLAGC 276 (620)
Q Consensus 265 ~~AL~~G~I~GA 276 (620)
.+ +...++.|.
T Consensus 163 ~k-~p~~rviG~ 173 (480)
T 1obb_A 163 TR-TVPIKAVGF 173 (480)
T ss_dssp HH-HSCSEEEEE
T ss_pred HH-CCCCcEEec
Confidence 55 555566654
No 271
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.15 E-value=0.012 Score=61.23 Aligned_cols=67 Identities=21% Similarity=0.294 Sum_probs=48.3
Q ss_pred cEEEEEeCChhhH-HHHHHHhhC-CCEEE-EECCCCCCCCcccc---CCceecCCHHhhhcC--CcEEEEcccCCh
Q 007040 163 LVLGIVGRSASAR-ALATRSLSF-KMSVL-YFDVPEGKGKVTFP---SAARRMDTLNDLLAA--SDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGlG~IG~-~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~---~g~~~~~sL~eLL~~--sDvVil~lPlT~ 230 (620)
.+|||||+|.||+ ..+..++.. +++|. ++|++ ........ .++..+.+++++++. .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHT 77 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHH
Confidence 4799999999999 577777765 78875 67877 22111001 245667899999986 899999999653
No 272
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.11 E-value=0.014 Score=60.89 Aligned_cols=94 Identities=23% Similarity=0.353 Sum_probs=61.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC-------cc-----ccCCceecCCHHhhhcCCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK-------VT-----FPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~-------~~-----~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
..++|+|||.|.||..+|..|...|+ +|..+|....... .. ....+....+ .+.++.||+|+++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 35789999999999999999987777 9999998874321 00 0111222234 478899999999975
Q ss_pred CC--hh-h--------HhhcC--HHHhhccCCCcEEEEcCC
Q 007040 228 VT--DE-T--------IQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 228 lT--~~-T--------~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
.. +. | ..++- .+.+....|++++|+++-
T Consensus 83 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 83 VPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred cCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 32 11 1 11221 123344458999999964
No 273
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.09 E-value=0.059 Score=56.26 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=70.8
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEccc
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~lP 227 (620)
+.|.+|++||= +++..+++..+..||++|.+..|..-.....+ ..| +....++++.++.+|||..-.=
T Consensus 153 l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 153 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVW 232 (315)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCC
T ss_pred cCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcce
Confidence 68999999997 89999999999999999999998653332111 123 3456899999999999998442
Q ss_pred C-------Chhh-----HhhcCHHHhhccCCCcEEEEcC
Q 007040 228 V-------TDET-----IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 228 l-------T~~T-----~~lI~~~~L~~MK~gAiLINvg 254 (620)
. .++- .--++.+.++.+||+++|.-+.
T Consensus 233 ~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 233 ASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 1 1111 1346888888889998888764
No 274
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=0.011 Score=56.22 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=48.8
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPlT 229 (620)
++|.|.| .|.||+.+++.|...|++|++++|+....... ..++ ...+++.+++..+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6799998 69999999999999999999999986443211 1111 12234667888999999887644
No 275
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.03 E-value=0.01 Score=62.56 Aligned_cols=66 Identities=21% Similarity=0.217 Sum_probs=48.5
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce-----ecCCHHhhhcCCcEEEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR-----RMDTLNDLLAASDVISL 224 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~-----~~~sL~eLL~~sDvVil 224 (620)
.+.+++|||||.|.+|+.+++.++.+|++|+++|+++........+... ..+.+.+++..+|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 3579999999999999999999999999999999876443222221111 11236677888998854
No 276
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.01 E-value=0.011 Score=64.55 Aligned_cols=100 Identities=12% Similarity=0.185 Sum_probs=71.7
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCC-ccccCCceecCCHHhhhcCCcEEEEccc
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGK-VTFPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~-~~~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
.+.|++|+|+|+. .-...|++.|...|++|.+|||...... ..+ .+.....++++.+..+|+|++++.
T Consensus 319 ~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~-~~~~~~~~~~~~~~~ad~vvi~t~ 397 (446)
T 4a7p_A 319 DVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKML-TDVEFVENPYAAADGADALVIVTE 397 (446)
T ss_dssp CCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGC-SSCCBCSCHHHHHTTBSEEEECSC
T ss_pred cCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhc-CCceEecChhHHhcCCCEEEEeeC
Confidence 4789999999997 6789999999999999999999873211 111 134556788999999999999998
Q ss_pred CChhhHhhcCHHHh-hccCCCcEEEEcCCChhhcHHHH
Q 007040 228 VTDETIQIINAECL-QHIKPGAFLVNTGSSQLLDDCAV 264 (620)
Q Consensus 228 lT~~T~~lI~~~~L-~~MK~gAiLINvgRG~vVDe~AL 264 (620)
..+ - .-++-+.+ +.|+ +.++|++ |+ +.|.+.+
T Consensus 398 ~~~-f-~~~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 398 WDA-F-RALDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CTT-T-TSCCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CHH-h-hcCCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 652 1 22454444 4466 4678884 54 3555544
No 277
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.00 E-value=0.0042 Score=64.88 Aligned_cols=68 Identities=13% Similarity=0.165 Sum_probs=50.5
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~ 231 (620)
.+|||||+|.||+. .+..++.. +++|. ++|++.......+ .+...+.+++++++ +.|+|++++|....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~-~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDF-PDAEVVHELEEITNDPAIELVIVTTPSGLH 78 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHC-TTSEEESSTHHHHTCTTCCEEEECSCTTTH
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC-CCCceECCHHHHhcCCCCCEEEEcCCcHHH
Confidence 47999999999997 68878766 78875 6687763321112 24556789999998 68999999997643
No 278
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.00 E-value=0.011 Score=55.64 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=58.0
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce-ecCCHH----hhhcCCcEEEEcccCChhhHh--
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR-RMDTLN----DLLAASDVISLHCAVTDETIQ-- 234 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~-~~~sL~----eLL~~sDvVil~lPlT~~T~~-- 234 (620)
++|.|+| .|.||+.+++.|...|++|++++|+........ .++. ...++. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccchH
Confidence 4689999 599999999999999999999999864322100 1111 011111 677889999998876533211
Q ss_pred -hcCHHHhhccCC--CcEEEEcCCCh
Q 007040 235 -IINAECLQHIKP--GAFLVNTGSSQ 257 (620)
Q Consensus 235 -lI~~~~L~~MK~--gAiLINvgRG~ 257 (620)
......+..|+. ...+|+++...
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecce
Confidence 111234444443 35666666543
No 279
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.99 E-value=0.0078 Score=66.09 Aligned_cols=106 Identities=11% Similarity=0.167 Sum_probs=67.7
Q ss_pred CcEEEEEeCChh-hHHHHHHHhhC-----CCEEEEECCCCCCCC------------ccccCCceecCCHHhhhcCCcEEE
Q 007040 162 GLVLGIVGRSAS-ARALATRSLSF-----KMSVLYFDVPEGKGK------------VTFPSAARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 162 GktVGIIGlG~I-G~~vA~~Lkaf-----G~~V~~~dr~~~~~~------------~~~~~g~~~~~sL~eLL~~sDvVi 223 (620)
.++|+|||.|.. |.++|..|... +.+|..||+.....+ ...+..+....++.+.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 458999999998 66677666544 668999999763211 001222334468888999999999
Q ss_pred EcccCChh---hH----------------------------hhc--CHHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 224 LHCAVTDE---TI----------------------------QII--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 224 l~lPlT~~---T~----------------------------~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
+++|.... ++ .++ -.+.+....|+|+|||++-.-=+-..++.+.
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~ 184 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRL 184 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHH
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 99997321 11 111 0133445578999999887654444444444
No 280
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.99 E-value=0.0029 Score=66.33 Aligned_cols=68 Identities=18% Similarity=0.124 Sum_probs=48.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc------CCceecCCHHhhhcCCcEEEEcccCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFP------SAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~------~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+.++|+|||.|.+|+.+|+.|.. ..+|.++|++....+.... ..+...+.|.++++++|+|++++|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 45679999999999999999976 5789999887533221111 11122345778889999999999854
No 281
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.99 E-value=0.011 Score=56.44 Aligned_cols=68 Identities=10% Similarity=-0.013 Sum_probs=49.8
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-----ccCCcee-cCCHHhhhcCCcEEEEcccCCh
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVT-----FPSAARR-MDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-----~~~g~~~-~~sL~eLL~~sDvVil~lPlT~ 230 (620)
++|.|.| .|.||+.+++.|...|++|++++|+....... ....... .+++.+++..+|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 4688998 89999999999999999999999987443211 0001112 2346677889999999887654
No 282
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=95.98 E-value=0.063 Score=56.30 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=69.9
Q ss_pred ecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
+.|.+|+|||=| ++..+++..+..||++|.+..|..-.....+ ..| +....+++++++.+|||..-.
T Consensus 165 l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~ 244 (325)
T 1vlv_A 165 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 244 (325)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred cCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEecc
Confidence 689999999996 9999999999999999999998653322111 123 345689999999999999843
Q ss_pred cC-------Chh-----hHhhcCHHHhhcc-CCCcEEEEcC
Q 007040 227 AV-------TDE-----TIQIINAECLQHI-KPGAFLVNTG 254 (620)
Q Consensus 227 Pl-------T~~-----T~~lI~~~~L~~M-K~gAiLINvg 254 (620)
=. .++ ..--++.+.++.+ ||+++|.-+.
T Consensus 245 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 245 WASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred ccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 21 111 1234588888888 8888888764
No 283
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.89 E-value=0.026 Score=54.31 Aligned_cols=71 Identities=14% Similarity=0.060 Sum_probs=52.3
Q ss_pred ecCcEEEEEe-CChhhHHHHHHHhhCCC--EEEEECCCCCCCCccccCC-------ceecCCHHhhhcCCcEEEEcccCC
Q 007040 160 CRGLVLGIVG-RSASARALATRSLSFKM--SVLYFDVPEGKGKVTFPSA-------ARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 160 L~GktVGIIG-lG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~~~~g-------~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+.++++.|.| .|.||+.+++.|...|+ +|++++++........... ....+++.+++...|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 4678999999 69999999999999999 9999998865432111111 112345667788899999988765
Q ss_pred h
Q 007040 230 D 230 (620)
Q Consensus 230 ~ 230 (620)
.
T Consensus 96 ~ 96 (242)
T 2bka_A 96 R 96 (242)
T ss_dssp H
T ss_pred c
Confidence 3
No 284
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=95.85 E-value=0.06 Score=56.39 Aligned_cols=94 Identities=9% Similarity=0.070 Sum_probs=66.3
Q ss_pred ecCcEEEEEeCC-hhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cCCceecCCHHhhhcCCcEEEEcc-
Q 007040 160 CRGLVLGIVGRS-ASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PSAARRMDTLNDLLAASDVISLHC- 226 (620)
Q Consensus 160 L~GktVGIIGlG-~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~g~~~~~sL~eLL~~sDvVil~l- 226 (620)
+.|.+|+|||=| ++..+++..+..||++|.+..|..-.....+ ...+....+++++++.+|||..-+
T Consensus 153 l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w 232 (321)
T 1oth_A 153 LKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTW 232 (321)
T ss_dssp CTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCS
T ss_pred cCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEecc
Confidence 689999999985 4888888888899999999998754322111 112455689999999999999843
Q ss_pred ---cCChhh----H----hhcCHHHhhccCCCcEEEEc
Q 007040 227 ---AVTDET----I----QIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 227 ---PlT~~T----~----~lI~~~~L~~MK~gAiLINv 253 (620)
....+. . --++.+.++.+||+++|.-+
T Consensus 233 ~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~ 270 (321)
T 1oth_A 233 ISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHC 270 (321)
T ss_dssp SCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEEC
T ss_pred ccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECC
Confidence 111111 0 23577888888888877765
No 285
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.84 E-value=0.0087 Score=61.93 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=65.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee-cCCHHhhhcCCcEEEEcccCChhhHhhcCHH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR-MDTLNDLLAASDVISLHCAVTDETIQIINAE 239 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~-~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~ 239 (620)
.|.+|.|+|.|.||...++.++.+|++|++.+++....+.....|... ..+.+++.+..|+|+-++..... -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 588999999999999999999999999999998876554333333321 12334444468999888874421 234
Q ss_pred HhhccCCCcEEEEcCCC
Q 007040 240 CLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 240 ~L~~MK~gAiLINvgRG 256 (620)
.+..++++..+|.+|-.
T Consensus 251 ~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 251 YLKLLTYNGDLALVGLP 267 (348)
T ss_dssp HHTTEEEEEEEEECCCC
T ss_pred HHHHHhcCCEEEEECCC
Confidence 67788889898888753
No 286
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.83 E-value=0.012 Score=61.05 Aligned_cols=95 Identities=11% Similarity=0.142 Sum_probs=60.4
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC-------cc--ccCCceecCCHHhhhcCCcEEEEcccCCh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK-------VT--FPSAARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~-------~~--~~~g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
.++|+|||.|.+|..+|..|...+. +|..+|....... .. +........+..+.+..||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3689999999999999999987676 9999998642211 00 10111122244677899999999987542
Q ss_pred h-----------hHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 231 E-----------TIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 231 ~-----------T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
. |..++- .+.+....|++++|+++-.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 123 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 123 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 2 111221 1233444789999998543
No 287
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.76 E-value=0.025 Score=57.66 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=64.9
Q ss_pred cEEEEEeCChhhHHHHHHHhh----CCCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHhh
Q 007040 163 LVLGIVGRSASARALATRSLS----FKMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQI 235 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka----fG~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~l 235 (620)
.+|||||+|.||+..++.+.. -++++. ++|++... ...++. ..+++++++ +.|+|++++|.... .-
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H--~~ 80 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSH--ED 80 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGH--HH
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhH--HH
Confidence 479999999999999988865 367766 56765321 112333 468999997 68999999995432 22
Q ss_pred cCHHHhhccCCCc-EEEEc-CCChhhcHHHHHHHHHcCCcc
Q 007040 236 INAECLQHIKPGA-FLVNT-GSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 236 I~~~~L~~MK~gA-iLINv-gRG~vVDe~AL~~AL~~G~I~ 274 (620)
+- +..++.|. +|+.- ---.+-+.++|+++.++..+.
T Consensus 81 ~~---~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 81 YI---RQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp HH---HHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred HH---HHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 22 23344454 66653 122344556788777665443
No 288
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.74 E-value=0.022 Score=58.56 Aligned_cols=67 Identities=13% Similarity=0.074 Sum_probs=50.5
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEE-EECCCCCCCCcc-ccCCceecCCHHhhh----------cCCcEEEEcccCC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLL----------AASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL----------~~sDvVil~lPlT 229 (620)
.+|||||+ |.||...++.++..+.+|. ++|++....... ...+...+.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 47999999 7899999999998898755 678876543211 112345667899988 5789999999965
No 289
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.72 E-value=0.014 Score=60.95 Aligned_cols=96 Identities=11% Similarity=0.146 Sum_probs=60.9
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC-------cc--ccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK-------VT--FPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~-------~~--~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
..++|+|||.|.+|..+|..|...++ +|..+|....... .. +........+..+.+..||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34789999999999999999986666 8999998642211 00 1011112224567789999999998754
Q ss_pred hh-----------hHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 230 DE-----------TIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 230 ~~-----------T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
.. |..++- .+.+....|++++|+++-.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 127 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 32 111111 1223334789999998543
No 290
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.70 E-value=0.017 Score=60.13 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=61.8
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC--CCCC-------cc-----ccCCceecCCHHhhhcCCcEEEEc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE--GKGK-------VT-----FPSAARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~--~~~~-------~~-----~~~g~~~~~sL~eLL~~sDvVil~ 225 (620)
..++|+|||.|.||..+|..+...|+ +|..+|+.+ .... .. ....+....+ .+.+++||+|+++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIia 85 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVIT 85 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEEe
Confidence 46789999999999999999998899 999999983 1111 00 0011122233 4678899999999
Q ss_pred ccCC--h-h--------hHhhcC--HHHhhccCCCcEEEEcCCC
Q 007040 226 CAVT--D-E--------TIQIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 226 lPlT--~-~--------T~~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
.... | . +..++- .+.+....|++++|+++-.
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 7432 2 1 112221 1234445789999999853
No 291
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.68 E-value=0.023 Score=58.63 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=50.0
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEE-EECCCCCCCCccc-cCCceecCCHHhhh-----------cCCcEEEEcccC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLL-----------AASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL-----------~~sDvVil~lPl 228 (620)
.++||||+ |.||...++.++..+.++. ++|++........ ..+...+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 47999999 7899999999998898755 6687765422111 12345667898887 568999999996
Q ss_pred C
Q 007040 229 T 229 (620)
Q Consensus 229 T 229 (620)
.
T Consensus 84 ~ 84 (318)
T 3oa2_A 84 Y 84 (318)
T ss_dssp G
T ss_pred H
Confidence 5
No 292
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=95.68 E-value=0.14 Score=54.03 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=68.6
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEccc
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~lP 227 (620)
+.|.+|+|||= +++..+++..+..||++|.+..|..-.....+ ..| +....+++++++.+|||..-.=
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 68999999986 57788888889999999999998653322110 112 3456799999999999987542
Q ss_pred CC------hhh-----HhhcCHHHhhccCCCcEEEEcC
Q 007040 228 VT------DET-----IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 228 lT------~~T-----~~lI~~~~L~~MK~gAiLINvg 254 (620)
.. ++. .--|+.+.++.+||+++|.-+.
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 21 111 1246888899899999888875
No 293
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.67 E-value=0.0053 Score=64.85 Aligned_cols=67 Identities=15% Similarity=0.164 Sum_probs=50.3
Q ss_pred cEEEEEeCC-hhhHHHHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRS-ASARALATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG-~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.+|||||+| .||..++..+... +++|. ++|++....... ...++..+.++++++++ .|+|++++|..
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcH
Confidence 479999999 9999999999876 67766 678875432211 11245567899999985 89999999954
No 294
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.66 E-value=0.033 Score=57.71 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=72.6
Q ss_pred ecCcEEEEE-eC-ChhhHHHHHHHhhCCCEEE-EECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHh
Q 007040 160 CRGLVLGIV-GR-SASARALATRSLSFKMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQ 234 (620)
Q Consensus 160 L~GktVGII-Gl-G~IG~~vA~~LkafG~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~ 234 (620)
+..+++.|| |+ |++|..+++.++.+|++++ .++|.....+ -.|...+.+++++.. ..|++++++|.. ....
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~---i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~ 86 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKT---HLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAA 86 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHH
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcce---ECCeeeechHHHhhhcCCCCEEEEecCHH-HHHH
Confidence 466788988 99 9999999999999999844 5666532111 246666778999988 899999999943 2333
Q ss_pred hcCHHHhhccCCCcEEEEcCCCh-hhcHHHHHHHHHcC-Ccc
Q 007040 235 IINAECLQHIKPGAFLVNTGSSQ-LLDDCAVKQLLIDG-TLA 274 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgRG~-vVDe~AL~~AL~~G-~I~ 274 (620)
++. +.++. .- ..+|+.+-|- .-++..|.+..++. .+.
T Consensus 87 ~~~-e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 87 AIN-EAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHH-HHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HHH-HHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 332 23332 11 2445566553 34455788888876 554
No 295
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.65 E-value=0.0046 Score=64.55 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=62.8
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCC---CCCCccccCCceecC--CH-Hhhh---cCCcEEEEcccCC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPE---GKGKVTFPSAARRMD--TL-NDLL---AASDVISLHCAVT 229 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~---~~~~~~~~~g~~~~~--sL-~eLL---~~sDvVil~lPlT 229 (620)
.+.|++|.|+|.|.||..+++.++.+|++|++.+++. ...+.....|....+ ++ +++. ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 3569999999999999999999999999999999876 332211112222111 11 1111 3479999888754
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
... + ...+..|+++..+|++|-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 322 0 345677888888888864
No 296
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=95.65 E-value=0.046 Score=58.56 Aligned_cols=97 Identities=12% Similarity=0.020 Sum_probs=69.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
-.++.|+|.|.+|+++|+.++.+|++|+++|+++.-.. .+-+..+|-++...|. + .+.. +
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~-------------~~~fp~a~~~~~~~p~--~---~~~~--~ 263 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT-------------TARFPTADEVVVDWPH--R---YLAA--Q 263 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC-------------TTTCSSSSEEEESCHH--H---HHHH--H
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc-------------cccCCCceEEEeCChH--H---HHHh--h
Confidence 34799999999999999999999999999998763211 1233566655555441 1 1111 1
Q ss_pred h---ccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEe
Q 007040 242 Q---HIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCAL 278 (620)
Q Consensus 242 ~---~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaL 278 (620)
. .+.+++.+|=+.++.-.|...|..+|+.+.....++
T Consensus 264 ~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~ 303 (386)
T 2we8_A 264 AEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGA 303 (386)
T ss_dssp HHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEE
T ss_pred ccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEEE
Confidence 1 167888999999999999999999998863443433
No 297
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.65 E-value=0.031 Score=59.09 Aligned_cols=98 Identities=14% Similarity=0.205 Sum_probs=61.6
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCC------CEEEEECCCCCCCCc-c-----cc--CCce-ecCCHHhhhcCCcEEEEcc
Q 007040 163 LVLGIVG-RSASARALATRSLSFK------MSVLYFDVPEGKGKV-T-----FP--SAAR-RMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG------~~V~~~dr~~~~~~~-~-----~~--~g~~-~~~sL~eLL~~sDvVil~l 226 (620)
++|+|+| .|.+|+.+.+.|...+ ++|..+......... . +. .... ...+. +.+..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 6899999 9999999999999876 477776532212110 0 10 0011 11133 3456899999999
Q ss_pred cCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 227 AVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 227 PlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
|... ..+....++.|+.+|+.+..--.+..+.++.
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~~ 123 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVWER 123 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHHHH
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCcchhhhh
Confidence 9662 2333444467899999986655555455544
No 298
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.65 E-value=0.18 Score=52.07 Aligned_cols=70 Identities=14% Similarity=0.004 Sum_probs=55.7
Q ss_pred ecCcEEEEEeC---ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCCh
Q 007040 160 CRGLVLGIVGR---SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 160 L~GktVGIIGl---G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
+.|.+|+|||= +++..+++..+..||++|.+..|..-........|+....+++++++.+|||.. +-..-
T Consensus 144 l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q~ 216 (291)
T 3d6n_B 144 VKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQK 216 (291)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCCT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCccc
Confidence 68999999997 899999999999999999999986532221112245567899999999999999 66543
No 299
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.63 E-value=0.016 Score=58.29 Aligned_cols=37 Identities=24% Similarity=0.112 Sum_probs=32.7
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGK 197 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~ 197 (620)
.|++|.|.|. |.||+.+++.|...|++|++++++...
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 39 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE 39 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 5788999987 999999999999999999999987643
No 300
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.62 E-value=0.025 Score=51.14 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=71.1
Q ss_pred cEEEEEeC----ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGR----SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGl----G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~ 238 (620)
++|+|||. |..|..+.+.|+.+|++|+-++|..... .|...+.+|.++=. -|++++++|. +.+..++.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v~- 76 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINP-QNQLSEYN- 76 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCH-HHHGGGHH-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCH-HHHHHHHH-
Confidence 57999998 5689999999999999999999875321 35556678888877 9999999994 33444543
Q ss_pred HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 239 ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+.. .+...+++++.|- .++++.+.+++..+.
T Consensus 77 e~~-~~g~k~v~~~~G~----~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 77 YIL-SLKPKRVIFNPGT----ENEELEEILSENGIE 107 (122)
T ss_dssp HHH-HHCCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred HHH-hcCCCEEEECCCC----ChHHHHHHHHHcCCe
Confidence 233 3444567776543 356777777777665
No 301
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.60 E-value=0.01 Score=60.53 Aligned_cols=94 Identities=15% Similarity=0.110 Sum_probs=59.4
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCcccc-----CCceecCCHHhhhcCCcEEEEcccCChhh
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFP-----SAARRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~-----~g~~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
++.|+++.|+|.|..+++++..|...|. +|++++|+......... ..........+.+.++|+|+++.|..-..
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~ 201 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGT 201 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCST
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCC
Confidence 3678999999999999999999999997 89999998644321100 00111122233456789999999865221
Q ss_pred H--hhcCHHHhhccCCCcEEEE
Q 007040 233 I--QIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 233 ~--~lI~~~~L~~MK~gAiLIN 252 (620)
. --+....++.++++.++.+
T Consensus 202 ~~~~p~~~~~~~~l~~~~~v~D 223 (269)
T 3tum_A 202 RAELPLSAALLATLQPDTLVAD 223 (269)
T ss_dssp TCCCSSCHHHHHTCCTTSEEEE
T ss_pred CCCCCCChHHHhccCCCcEEEE
Confidence 1 1234445555555544333
No 302
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.55 E-value=0.012 Score=57.89 Aligned_cols=67 Identities=21% Similarity=0.173 Sum_probs=46.8
Q ss_pred CcEEEEEeCChhhHHHHHH--HhhCCCEEE-EECCCCCCCCccc-cCCceecCCHHhhhc-CCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATR--SLSFKMSVL-YFDVPEGKGKVTF-PSAARRMDTLNDLLA-ASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~--LkafG~~V~-~~dr~~~~~~~~~-~~g~~~~~sL~eLL~-~sDvVil~lPlT 229 (620)
..+++|||.|.+|+.+|+. ... |+++. ++|..+....... ...+...++++++++ +.|+|++++|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 3579999999999999995 334 88765 5677664432111 112334678999886 489999999954
No 303
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.54 E-value=0.03 Score=53.09 Aligned_cols=94 Identities=11% Similarity=0.044 Sum_probs=57.5
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee-cCCHH----hhhcCCcEEEEcccCC--h---h
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR-MDTLN----DLLAASDVISLHCAVT--D---E 231 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~-~~sL~----eLL~~sDvVil~lPlT--~---~ 231 (620)
++|.|.|. |.||+.+++.|...|++|++++|+..........++.. ..++. +.+..+|+|+.+.... + .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 46889987 99999999999999999999999753322111111110 11221 6788899999988653 1 1
Q ss_pred hHhhcCHHHhhccC-CCcEEEEcCCC
Q 007040 232 TIQIINAECLQHIK-PGAFLVNTGSS 256 (620)
Q Consensus 232 T~~lI~~~~L~~MK-~gAiLINvgRG 256 (620)
+.-.....++..|+ .|..+|+++..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 11111233445553 24667777653
No 304
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.54 E-value=0.026 Score=58.04 Aligned_cols=106 Identities=8% Similarity=0.014 Sum_probs=68.0
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCE-EEEECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCChhhHhhcCH
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMS-VLYFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVTDETIQIINA 238 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~-V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT~~T~~lI~~ 238 (620)
.+++|+|. |++|+.+++.+...|++ |..++|.... . . ..+...+.+++++.. ..|++++++|.. .+...+ .
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g-~-~-i~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v-~ 88 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGG-Q-N-VHGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAV-F 88 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTT-C-E-ETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH-H
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCC-c-e-ECCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHH-H
Confidence 45788899 99999999999998997 4456654321 1 1 146667789999998 899999999943 233333 2
Q ss_pred HHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 239 ECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 239 ~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
+.++.=.+..+++..+- ...++++|.++.++..+.
T Consensus 89 ea~~~Gi~~vVi~t~G~-~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 89 EAIDAGIELIVVITEHI-PVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HHHHTTCSEEEECCSCC-CHHHHHHHHHHHHHHTCE
T ss_pred HHHHCCCCEEEEECCCC-CHHHHHHHHHHHHHcCCE
Confidence 33333222233333322 334567888888776553
No 305
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.53 E-value=0.023 Score=59.16 Aligned_cols=95 Identities=16% Similarity=0.205 Sum_probs=67.6
Q ss_pred ecCcEEEEEeCC---hhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----cCC--ceecCCHHhhhcCCcEEEEcccCC
Q 007040 160 CRGLVLGIVGRS---ASARALATRSLSFKMSVLYFDVPEGKGKVTF-----PSA--ARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 160 L~GktVGIIGlG---~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----~~g--~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+.|.+|++||=| ++..+++..+..||++|.+..|..-...... ..| +....+++++++.+|||..-.=..
T Consensus 153 l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~ 232 (308)
T 1ml4_A 153 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQK 232 (308)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCG
T ss_pred CCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccc
Confidence 689999999984 8999999999999999999998653322111 112 234578999999999999854211
Q ss_pred ------hhhH-----hhcCHHHhhccCCCcEEEEcC
Q 007040 230 ------DETI-----QIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 230 ------~~T~-----~lI~~~~L~~MK~gAiLINvg 254 (620)
++.. --++.+.++.+||+++|.-+.
T Consensus 233 er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 233 ERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred cccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 1111 234777777778777777653
No 306
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.51 E-value=0.022 Score=61.38 Aligned_cols=67 Identities=6% Similarity=0.076 Sum_probs=49.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCccc----cCC---ceecC----CHHhhhc--CCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVTF----PSA---ARRMD----TLNDLLA--ASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~----~~g---~~~~~----sL~eLL~--~sDvVil~lP 227 (620)
.+|||||+|.||+..++.+... |++|. ++|+++....... ..+ ...+. +++++++ +.|+|++++|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 5799999999999999998875 77764 7788764332111 012 34455 8999997 4899999999
Q ss_pred CC
Q 007040 228 VT 229 (620)
Q Consensus 228 lT 229 (620)
..
T Consensus 101 ~~ 102 (444)
T 2ixa_A 101 WE 102 (444)
T ss_dssp GG
T ss_pred cH
Confidence 54
No 307
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.51 E-value=0.017 Score=60.54 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=63.6
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC---------ccccC--CceecCCHHhhhcCCcEEEEc
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK---------VTFPS--AARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~---------~~~~~--g~~~~~sL~eLL~~sDvVil~ 225 (620)
....++|+|||.|.||..+|..+...|. +|..+|....... ..+.. ......+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999987777 9999998753111 01111 122234565 58999999998
Q ss_pred ccCCh---hhH--------hhcC--HHHhhccCCCcEEEEcCCC
Q 007040 226 CAVTD---ETI--------QIIN--AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 226 lPlT~---~T~--------~lI~--~~~L~~MK~gAiLINvgRG 256 (620)
..... .|+ .++- .+.+....|++++++++-.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 64321 122 2221 1234455899999999854
No 308
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.49 E-value=0.0075 Score=62.79 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=64.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---c--C-CHH-hhhcCCcEEEEcccCChhhH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---M--D-TLN-DLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~--~-sL~-eLL~~sDvVil~lPlT~~T~ 233 (620)
.|.+|.|+|.|.||..+++.++.+|++|++.+++....+.....|... . . ++. .+....|+|+.+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 588999999999999999999999999999998775543222223221 1 1 222 22246899999987621 0
Q ss_pred hhcCHHHhhccCCCcEEEEcCCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..+ ...+..|+++..+|.+|..
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhcCCCEEEEecCC
Confidence 112 2457788999999998753
No 309
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.46 E-value=0.018 Score=59.60 Aligned_cols=62 Identities=18% Similarity=0.157 Sum_probs=48.4
Q ss_pred CcEEEEEeCChhhH-HHHHHHhhC-CCEEE-EECCCCCCCCccccCCceecCCHHhhhcC---CcEEEEcccCC
Q 007040 162 GLVLGIVGRSASAR-ALATRSLSF-KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLAA---SDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~-~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~~---sDvVil~lPlT 229 (620)
-.+|||||+|.||+ ..++.++.. +++|. ++|++... .++..+.+++++++. .|+|++++|..
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 46899999999999 788888876 77765 56776532 245567899999876 89999999943
No 310
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=95.45 E-value=0.097 Score=55.72 Aligned_cols=95 Identities=11% Similarity=0.024 Sum_probs=69.2
Q ss_pred ecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCC--Ccc---------ccCC--ceecCCHHhhhcCCcEEEE
Q 007040 160 CRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKG--KVT---------FPSA--ARRMDTLNDLLAASDVISL 224 (620)
Q Consensus 160 L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~--~~~---------~~~g--~~~~~sL~eLL~~sDvVil 224 (620)
+.|.+|++||=| +++.+++..+..+|++|.+..|..-.. ... ...| +....+++++++.+|||..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 689999999988 788999999999999999999864322 111 0112 3456799999999999997
Q ss_pred cc--cCCh--h---hH------hhcCHHHhhccCCCcEEEEcC
Q 007040 225 HC--AVTD--E---TI------QIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 225 ~l--PlT~--~---T~------~lI~~~~L~~MK~gAiLINvg 254 (620)
-+ .... + .+ --|+.+.++.+||+++|.-+.
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 32 1111 1 01 236888999999999988875
No 311
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.42 E-value=0.17 Score=52.62 Aligned_cols=95 Identities=9% Similarity=0.017 Sum_probs=68.1
Q ss_pred ec-CcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cCCceecCCHHhhhcCCcEEEEcc
Q 007040 160 CR-GLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PSAARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~-GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~g~~~~~sL~eLL~~sDvVil~l 226 (620)
+. |.+|+|||= +++..+++..+..||++|.+..|..-...... ...+....++++.++.+|||..-.
T Consensus 143 l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~ 222 (307)
T 3tpf_A 143 QNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDT 222 (307)
T ss_dssp GGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecC
Confidence 67 999999996 57888888889999999999998653322111 113345679999999999998765
Q ss_pred --cCCh--h--------hHhhcCHHHhhccCCCcEEEEcC
Q 007040 227 --AVTD--E--------TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 227 --PlT~--~--------T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.... + ..--++.+.++.+|++++|.-+.
T Consensus 223 w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 223 WVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp SSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred cccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 0111 1 01236888888888888888775
No 312
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.40 E-value=0.039 Score=58.14 Aligned_cols=96 Identities=14% Similarity=0.082 Sum_probs=71.2
Q ss_pred eecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEc
Q 007040 159 RCRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 159 ~L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~ 225 (620)
.+.|.+|++||=| +++.+++..+..||++|.+..|..-.....+ ..| +....++++.++.+|||..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 3789999999996 9999999999999999999998653322111 123 34568999999999999984
Q ss_pred ccC--------Chh-----hHhhcCHHHhhcc-CCCcEEEEcC
Q 007040 226 CAV--------TDE-----TIQIINAECLQHI-KPGAFLVNTG 254 (620)
Q Consensus 226 lPl--------T~~-----T~~lI~~~~L~~M-K~gAiLINvg 254 (620)
.=. ..+ ..--++.+.++.+ ||+++|.-+.
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 331 111 1134688899989 8899888774
No 313
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.36 E-value=0.045 Score=57.54 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=60.6
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCC-CEEEEECCCCCCCCccc---c--CC--ceecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 163 LVLGIVG-RSASARALATRSLSFK-MSVLYFDVPEGKGKVTF---P--SA--ARRMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~---~--~g--~~~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
.+|||+| +|.||+.+.+.|.... ++|.++........... + .+ .....++++ +..+|+|++|+|.... .
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5799999 8999999999998664 48777655332221100 0 01 111234444 5789999999997632 2
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhc-HHHHHHHHH
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLD-DCAVKQLLI 269 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVD-e~AL~~AL~ 269 (620)
.+. . ..++.|+.+|+.+-.--.+ .+...+...
T Consensus 83 ~~a-~---~~~~aG~~VId~Sa~~r~~~~~~y~~~y~ 115 (345)
T 2ozp_A 83 REF-D---RYSALAPVLVDLSADFRLKDPELYRRYYG 115 (345)
T ss_dssp HTH-H---HHHTTCSEEEECSSTTSCSCHHHHHHHHC
T ss_pred HHH-H---HHHHCCCEEEEcCccccCCChHHHHhhhc
Confidence 221 1 2346788999987633233 344444444
No 314
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.35 E-value=0.0091 Score=62.68 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=61.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---cCC---HHhhhcCCcEEEEcccCChhhHh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---MDT---LNDLLAASDVISLHCAVTDETIQ 234 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~~s---L~eLL~~sDvVil~lPlT~~T~~ 234 (620)
.|.+|.|+|.|.||...++.++.+|++|++.+++....+.....|... ..+ ++++....|+|+.++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 588999999999999999999999999999998764433222222211 111 22333457888888764321
Q ss_pred hcCHHHhhccCCCcEEEEcCC
Q 007040 235 IINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINvgR 255 (620)
-...+..|+++..+|.+|-
T Consensus 271 --~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhccCCEEEEecc
Confidence 1345677888888888765
No 315
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.33 E-value=0.048 Score=59.17 Aligned_cols=86 Identities=8% Similarity=0.081 Sum_probs=65.3
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhC-CCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEccc
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSF-KMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
.+.|++|+|+|+. .-...|++.|... |++|.+|||..... ....++++.+..+|+|+++++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~ 383 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSD 383 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSC
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecC
Confidence 3689999999974 3478999999999 99999999987542 124678999999999999998
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
..+ -+ -++-+.+..|+ +.++||+ |+
T Consensus 384 ~~~-f~-~~d~~~~~~~~-~~~i~D~-r~ 408 (431)
T 3ojo_A 384 HSE-FK-NLSDSHFDKMK-HKVIFDT-KN 408 (431)
T ss_dssp CGG-GT-SCCGGGGTTCS-SCEEEES-SC
T ss_pred CHH-Hh-ccCHHHHHhCC-CCEEEEC-CC
Confidence 652 22 23444556676 6788885 44
No 316
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.33 E-value=0.024 Score=54.63 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=45.9
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhc----CCcEEEEcccCC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLA----ASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~----~sDvVil~lPlT 229 (620)
+++.|.|. |.||+.+|+.|...|++|++.+++................++++++. ..|+|+.+.-..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 36788876 99999999999999999999998764432111111112234555554 789999876544
No 317
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.32 E-value=0.016 Score=57.46 Aligned_cols=67 Identities=16% Similarity=0.072 Sum_probs=48.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---cCCceecCCHHhhhcC-CcEEEEcccC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF---PSAARRMDTLNDLLAA-SDVISLHCAV 228 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---~~g~~~~~sL~eLL~~-sDvVil~lPl 228 (620)
+++|.|.|.|.||+.+++.|...|++|++++++........ .........+.+++.. +|+|+.+...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~ 73 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAA 73 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence 57899999999999999999999999999999865422110 0111123345566766 9999987753
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.31 E-value=0.05 Score=58.74 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=71.5
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCC----ccccCCceec--CCHHhhhcC-CcEEEEc--ccCC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGK----VTFPSAARRM--DTLNDLLAA-SDVISLH--CAVT 229 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~----~~~~~g~~~~--~sL~eLL~~-sDvVil~--lPlT 229 (620)
++.|++|.|||+|.+|.++|+.|+..|++|.++|....... .....|+... ...++++.. +|+|++. +|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 46799999999999999999999999999999998652111 1111233221 223456666 8999985 4332
Q ss_pred -hhh-----H--hhcCH-HHhhccCCCcEEEEc-CCChhhcHHHHHHHHHcCC
Q 007040 230 -DET-----I--QIINA-ECLQHIKPGAFLVNT-GSSQLLDDCAVKQLLIDGT 272 (620)
Q Consensus 230 -~~T-----~--~lI~~-~~L~~MK~gAiLINv-gRG~vVDe~AL~~AL~~G~ 272 (620)
|+. . .++.. +.+..+.+..++-=| +-|+.--..-+...|+...
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 221 1 13443 344444334444434 4688877777777787544
No 319
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.29 E-value=0.028 Score=58.62 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=60.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee---c----CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR---M----DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~---~----~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|... . .++.+.+. ..|+|+.++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 8999998765433222222211 1 12333222 4788888776
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcCC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTGS 255 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvgR 255 (620)
..+. -...+..++++ ..+|.+|-
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcC
Confidence 4221 13456777887 77777764
No 320
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.28 E-value=0.032 Score=56.72 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=49.6
Q ss_pred ecCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcc------------------ccCCceecCCHHhhhcCCc
Q 007040 160 CRGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVT------------------FPSAARRMDTLNDLLAASD 220 (620)
Q Consensus 160 L~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~------------------~~~g~~~~~sL~eLL~~sD 220 (620)
+.+++|.|.| .|-||+.+++.|...|++|+++++........ ........+.+.+++..+|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 5688999999 59999999999999999999999876432100 0001112234667788899
Q ss_pred EEEEcccC
Q 007040 221 VISLHCAV 228 (620)
Q Consensus 221 vVil~lPl 228 (620)
+|+.+...
T Consensus 103 ~Vih~A~~ 110 (351)
T 3ruf_A 103 HVLHQAAL 110 (351)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 98887764
No 321
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.28 E-value=0.1 Score=55.42 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=70.1
Q ss_pred ecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
+.|.+|++||=| +++.+++..+..||++|.+..|..-.....+ ..| +....+++++++.+|||..-.
T Consensus 174 l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 174 LQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred cCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcc
Confidence 689999999996 9999999999999999999998653222111 122 445689999999999999844
Q ss_pred cC--C----hh-----hHhhcCHHHhhccC---CCcEEEEcC
Q 007040 227 AV--T----DE-----TIQIINAECLQHIK---PGAFLVNTG 254 (620)
Q Consensus 227 Pl--T----~~-----T~~lI~~~~L~~MK---~gAiLINvg 254 (620)
=. . .+ ..--|+.+.++.+| |+++|.-+.
T Consensus 254 w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 254 WVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp SCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred cccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 21 0 11 11345888888888 888888774
No 322
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.26 E-value=0.019 Score=56.65 Aligned_cols=66 Identities=14% Similarity=0.016 Sum_probs=47.0
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce----ecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR----RMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~----~~~sL~eLL~~sDvVil~lPlT 229 (620)
.++|.|.|.|.||+.+++.|...|++|++++|+..........++. ...+++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 3689999999999999999999999999999976432211111111 112333 77899999887654
No 323
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.25 E-value=0.022 Score=58.86 Aligned_cols=93 Identities=16% Similarity=0.162 Sum_probs=59.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC--CEEEEECCCCCCCC---cccc------CCceecCCHHhhhcCCcEEEEcccCChh
Q 007040 163 LVLGIVGRSASARALATRSLSFK--MSVLYFDVPEGKGK---VTFP------SAARRMDTLNDLLAASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG--~~V~~~dr~~~~~~---~~~~------~g~~~~~sL~eLL~~sDvVil~lPlT~~ 231 (620)
++|+|||.|.+|.++|..|...+ -+|..+|....... ..+. .......+-.+.+..||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 47999999999999999998766 48999998752211 0000 1111111236678999999999865432
Q ss_pred -----------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 232 -----------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 232 -----------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
|..++- .+.+....|++++||++-
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 111111 122333478999999854
No 324
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.25 E-value=0.06 Score=56.81 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECC
Q 007040 115 AEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDV 193 (620)
Q Consensus 115 a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr 193 (620)
....||.++-|=|-++|- .-|.. .+...|++++|.|||.|.+|..+|+.|...|. ++..+|.
T Consensus 4 p~~~~~~~~~lnl~lm~w-----------Rll~~------~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 4 PLKIADQSVDLNLKLMKW-----------RILPD------LNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp HHHHHHHHHHHHHHHHHH-----------HTCTT------CCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHH-----------hhcch------hhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 345777777776666531 12321 23457899999999999999999999999998 7888887
Q ss_pred CCCCCC-------------------------ccccCCc--eec---------------------CCHHhhhcCCcEEEEc
Q 007040 194 PEGKGK-------------------------VTFPSAA--RRM---------------------DTLNDLLAASDVISLH 225 (620)
Q Consensus 194 ~~~~~~-------------------------~~~~~g~--~~~---------------------~sL~eLL~~sDvVil~ 225 (620)
..-... ......+ ... +.+.+++..+|+|+.+
T Consensus 67 D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~ 146 (340)
T 3rui_A 67 GTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLL 146 (340)
T ss_dssp CBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEEC
T ss_pred CEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEec
Confidence 531100 0000001 111 1246788889999887
Q ss_pred ccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 226 CAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 226 lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+- +.+++.+++...... +..+|+.+
T Consensus 147 tD-n~~tR~lin~~c~~~---~~plI~aa 171 (340)
T 3rui_A 147 VD-SRESRWLPSLLSNIE---NKTVINAA 171 (340)
T ss_dssp CS-STGGGHHHHHHHHHT---TCEEEEEE
T ss_pred CC-CHHHHHHHHHHHHHc---CCcEEEee
Confidence 75 556888888766553 44577754
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.25 E-value=0.028 Score=58.63 Aligned_cols=90 Identities=12% Similarity=0.090 Sum_probs=57.8
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee---c----CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR---M----DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~---~----~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||..+++.++.+|+ +|++.+++....+.....|... . .++.+.+. ..|+|+.++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58899999999999999999999999 8999998765433222222211 1 12322222 3677777775
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcCC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTGS 255 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvgR 255 (620)
..+. -...+..++++ ..+|.+|-
T Consensus 271 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLDT-----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHHH-----HHHHHHHBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEecc
Confidence 3211 12346667777 77777653
No 326
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.22 E-value=0.011 Score=64.77 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=49.8
Q ss_pred cEEEEEeC----ChhhHHHHHHHhhC--CCEEE-EECCCCCCCCcc-ccCCc---eecCCHHhhhc--CCcEEEEcccCC
Q 007040 163 LVLGIVGR----SASARALATRSLSF--KMSVL-YFDVPEGKGKVT-FPSAA---RRMDTLNDLLA--ASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl----G~IG~~vA~~Lkaf--G~~V~-~~dr~~~~~~~~-~~~g~---~~~~sL~eLL~--~sDvVil~lPlT 229 (620)
.+|||||+ |.||...++.|+.. +++|. ++|++....... ...++ ..+.+++++++ +.|+|++++|..
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVP 119 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 57999999 99999999999876 77765 778876432211 11122 35679999996 689999999944
No 327
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.22 E-value=0.037 Score=58.24 Aligned_cols=95 Identities=9% Similarity=0.083 Sum_probs=70.9
Q ss_pred ecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
+.|.+|++||=| +++.+++..+..||++|.+..|..-.....+ ..| +....++++.++.+|||..-.
T Consensus 153 l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 232 (333)
T 1duv_G 153 FNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDV 232 (333)
T ss_dssp GGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCC
Confidence 689999999986 9999999999999999999998653322111 223 345689999999999999843
Q ss_pred cCC--------hh-----hHhhcCHHHhhcc-CCCcEEEEcC
Q 007040 227 AVT--------DE-----TIQIINAECLQHI-KPGAFLVNTG 254 (620)
Q Consensus 227 PlT--------~~-----T~~lI~~~~L~~M-K~gAiLINvg 254 (620)
=.. .+ ..--|+.+.++.+ ||+++|.-+.
T Consensus 233 w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 233 WVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp SSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred ccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 310 11 1134688999999 9999988874
No 328
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.19 E-value=0.032 Score=57.05 Aligned_cols=35 Identities=20% Similarity=0.104 Sum_probs=31.0
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
..++|.|+|. |.||+.+++.|...|++|++++|..
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3578999997 9999999999999999999999976
No 329
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.17 E-value=0.045 Score=57.09 Aligned_cols=95 Identities=11% Similarity=0.140 Sum_probs=66.8
Q ss_pred ecCcEEEEEeC---ChhhHHHHHHHhhC-CCEEEEECCCCCCCCccc-----cCC--ceecCCHHhhhcCCcEEEEcccC
Q 007040 160 CRGLVLGIVGR---SASARALATRSLSF-KMSVLYFDVPEGKGKVTF-----PSA--ARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 160 L~GktVGIIGl---G~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~-----~~g--~~~~~sL~eLL~~sDvVil~lPl 228 (620)
+.|.+|++||= |++..+++..+..| |++|.+..|..-...... ..| +....+++++++.+|||..-.=.
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQ 231 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC--
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 68999999998 59999999999999 999999998653322111 112 33457899999999999886432
Q ss_pred Ch----hh------HhhcCHHHhhccCCCcEEEEcC
Q 007040 229 TD----ET------IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 229 T~----~T------~~lI~~~~L~~MK~gAiLINvg 254 (620)
.+ +. .--++.+.++.+||+++|.-+.
T Consensus 232 ~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 232 KERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ---------------CCBCGGGGTTCCTTCEEECCS
T ss_pred ccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 11 11 1235777777778887777653
No 330
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.17 E-value=0.0098 Score=61.39 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=47.9
Q ss_pred cEEEEEeCChhhHH-HHHHHhhC-CCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRSASARA-LATRSLSF-KMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~-vA~~Lkaf-G~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.+|||||+|.||+. ++..++.. +++|. ++|+++...... ...++ ..+.+++++|++ .|+|++++|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 37999999999985 56777765 77876 578876433211 11233 356899999965 79999999965
No 331
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.16 E-value=0.064 Score=54.64 Aligned_cols=107 Identities=10% Similarity=0.141 Sum_probs=76.2
Q ss_pred ecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCCh---------
Q 007040 160 CRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTD--------- 230 (620)
Q Consensus 160 L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~--------- 230 (620)
+.|++|.|+|.......+++.|...|++|.++...... ....+.....++.+.++++|+|++-.|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~---~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLD---HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSS---CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccc---cccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 57889999999999999999999999999887422111 112334445567788899999997444321
Q ss_pred -hhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 231 -ETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 231 -~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
.+...++++.++.++++.+++ ++- |..++.+++.+..|.
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~-~g~----~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF-SGI----SNAYLENIAAQAKRK 121 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE-ESS----CCHHHHHHHHHTTCC
T ss_pred ccCCccchHHHHhhcCCCCEEE-Eec----CCHHHHHHHHHCCCE
Confidence 122347888999999998888 432 777766777766665
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.16 E-value=0.012 Score=60.81 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=59.9
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---c--CCHHhh----hcCCcEEEEcccCChh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---M--DTLNDL----LAASDVISLHCAVTDE 231 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~--~sL~eL----L~~sDvVil~lPlT~~ 231 (620)
.|.+|.|+|.|.||..+++.++.+|++|++.+++....+.....+... . .++.+. ....|+|+.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 578999999999999999999999999999998754322111122211 0 122221 2357888887764221
Q ss_pred hHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 232 TIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
-...+..|+++..+|.+|..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 13456777888888887653
No 333
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=95.15 E-value=0.025 Score=56.26 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=34.0
Q ss_pred eecCcEEEEEeC---ChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 159 RCRGLVLGIVGR---SASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 159 ~L~GktVGIIGl---G~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.+.|+++.|.|. |.||+++|+.|...|++|++.+++..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 367899999997 69999999999999999999998763
No 334
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.15 E-value=0.017 Score=59.77 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=58.7
Q ss_pred EEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCc---c-------c--cCCceecCCHHhhhcCCcEEEEcccCCh
Q 007040 164 VLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKV---T-------F--PSAARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 164 tVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~---~-------~--~~g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
+|+|||.|.||..+|..+...|+ +|..+|........ . . ...+....+. +.++.||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999999886677 79999987632220 0 0 1112222455 67899999999976543
Q ss_pred h-----------hHhhcC--HHHhhccCCCcEEEEcCC
Q 007040 231 E-----------TIQIIN--AECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 231 ~-----------T~~lI~--~~~L~~MK~gAiLINvgR 255 (620)
. +..++- .+.+....|++++|+++-
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1 111121 112333358999999854
No 335
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.13 E-value=0.051 Score=57.43 Aligned_cols=102 Identities=9% Similarity=0.072 Sum_probs=61.9
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCC-CEEEEECCCCCCCCcccc------CCc----eecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFK-MSVLYFDVPEGKGKVTFP------SAA----RRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~~------~g~----~~~~sL~eLL~~sDvVil~lPlT 229 (620)
..+|||+| +|.||+.+++.|.... ++|.++........ .+. .+. ....+ ++.+..+|+|++|+|..
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~-~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQ-SMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTS-CHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCC-CHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 36899999 9999999999998765 48887765432221 110 110 01112 45667899999999965
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCChhhc-HHHHHHHHHcC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSSQLLD-DCAVKQLLIDG 271 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG~vVD-e~AL~~AL~~G 271 (620)
.. ... .-.. +.|+.+|+.+-.-=.+ .+...+.....
T Consensus 94 ~s-~~~----a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~ 130 (359)
T 1xyg_A 94 TT-QEI----IKEL-PTALKIVDLSADFRLRNIAEYEEWYGQP 130 (359)
T ss_dssp TH-HHH----HHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSC
T ss_pred hH-HHH----HHHH-hCCCEEEECCccccCCchhhhhhhhcCC
Confidence 32 111 1223 7799999987643333 34444444433
No 336
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.11 E-value=0.029 Score=59.03 Aligned_cols=88 Identities=9% Similarity=0.074 Sum_probs=52.7
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCC-CEEEEECCC-CCCCCcc---ccC--------C---c-eecCCHHhhhc-CCcEEE
Q 007040 163 LVLGIVG-RSASARALATRSLSFK-MSVLYFDVP-EGKGKVT---FPS--------A---A-RRMDTLNDLLA-ASDVIS 223 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG-~~V~~~dr~-~~~~~~~---~~~--------g---~-~~~~sL~eLL~-~sDvVi 223 (620)
.+|||+| +|.||+.+++.|.... ++|.++.++ ....... ... + . ....++++++. .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4799999 9999999999998764 688776422 1121100 000 0 0 01124556656 899999
Q ss_pred EcccCChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 224 LHCAVTDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 224 l~lPlT~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
+|+|... +..+. . ..++.|+.+|+.+-
T Consensus 89 ~atp~~~-~~~~a-~---~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDL-AKKFE-P---EFAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHH-HHHHH-H---HHHHTTCEEEECCS
T ss_pred ECCCchH-HHHHH-H---HHHHCCCEEEECCc
Confidence 9999542 12221 1 22346788888764
No 337
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.11 E-value=0.032 Score=57.34 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=50.3
Q ss_pred cceeecCcEEEEEe-CChhhHHHHHHHhhC-CCEEEEECCCCCCCCcccc-CCce--------ecCCHHhhhcCCcEEEE
Q 007040 156 GMRRCRGLVLGIVG-RSASARALATRSLSF-KMSVLYFDVPEGKGKVTFP-SAAR--------RMDTLNDLLAASDVISL 224 (620)
Q Consensus 156 ~~~~L~GktVGIIG-lG~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~-~g~~--------~~~sL~eLL~~sDvVil 224 (620)
++..+.+++|.|.| .|-||+.+++.|... |++|++++++......... .++. ....+.+++..+|+|+.
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 44567889999999 699999999999987 9999999998654332111 1111 12235667888999998
Q ss_pred cccCC
Q 007040 225 HCAVT 229 (620)
Q Consensus 225 ~lPlT 229 (620)
+....
T Consensus 98 ~A~~~ 102 (372)
T 3slg_A 98 LVAIA 102 (372)
T ss_dssp CBCCC
T ss_pred cCccc
Confidence 66543
No 338
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.09 E-value=0.026 Score=61.61 Aligned_cols=106 Identities=18% Similarity=0.223 Sum_probs=68.7
Q ss_pred CcEEEEEeCChh-hHHHHHHHhh----C-CCEEEEECCCC--CCCC--------c--c--ccCCceecCCHHhhhcCCcE
Q 007040 162 GLVLGIVGRSAS-ARALATRSLS----F-KMSVLYFDVPE--GKGK--------V--T--FPSAARRMDTLNDLLAASDV 221 (620)
Q Consensus 162 GktVGIIGlG~I-G~~vA~~Lka----f-G~~V~~~dr~~--~~~~--------~--~--~~~g~~~~~sL~eLL~~sDv 221 (620)
.++|+|||.|.. |.+++..|.. + +.+|..||+.. .... . . .+..+....++.+.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 468999999999 8887666654 3 66899999977 3211 0 1 11223334678889999999
Q ss_pred EEEcccCChh---hH----------------------------hhc--CHHHhhccCCCcEEEEcCCChhhcHHHHHHH
Q 007040 222 ISLHCAVTDE---TI----------------------------QII--NAECLQHIKPGAFLVNTGSSQLLDDCAVKQL 267 (620)
Q Consensus 222 Vil~lPlT~~---T~----------------------------~lI--~~~~L~~MK~gAiLINvgRG~vVDe~AL~~A 267 (620)
|++++|.... ++ .++ -.+.+....|+|+|||++-.-=+-..++.+.
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~ 165 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRY 165 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHH
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 9999995421 11 111 0134455578999999987654555555554
No 339
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.08 E-value=0.032 Score=56.04 Aligned_cols=70 Identities=11% Similarity=0.063 Sum_probs=49.9
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCC--------------ccc-cCCceecCCHHhhhcCCcEEE
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGK--------------VTF-PSAARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~--------------~~~-~~g~~~~~sL~eLL~~sDvVi 223 (620)
+.|++|.|.|. |.||+.+++.|...|++|++++++..... ... .........+.+++...|+|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 57899999987 99999999999999999999998642210 000 111122345667777899998
Q ss_pred EcccCC
Q 007040 224 LHCAVT 229 (620)
Q Consensus 224 l~lPlT 229 (620)
.+....
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 877543
No 340
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.07 E-value=0.032 Score=55.21 Aligned_cols=67 Identities=4% Similarity=0.024 Sum_probs=49.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhhC-CCEEEEECCCCCCCCccccCCce-------ecCCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVG-RSASARALATRSLSF-KMSVLYFDVPEGKGKVTFPSAAR-------RMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~~g~~-------~~~sL~eLL~~sDvVil~lPlT 229 (620)
++|.|.| .|.||+.+++.|... |++|++.+|+..........++. ..+++.+++..+|+|+.+.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 4688998 599999999999987 99999999886543321112221 2235677899999999887754
No 341
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.06 E-value=0.11 Score=54.54 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=68.1
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cCCceecCCHHhhhcCCcEEEEccc
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
+.|.+|+|||= +++..+++..+..+|++|.+..|..-.....+ ...+....+++++++.+|||..-.=
T Consensus 155 l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 155 LAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVW 234 (323)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEece
Confidence 68999999986 67888899899999999999998653322111 1224456799999999999987542
Q ss_pred CCh----------hh--HhhcCHHHhhccCCCcEEEEcC
Q 007040 228 VTD----------ET--IQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 228 lT~----------~T--~~lI~~~~L~~MK~gAiLINvg 254 (620)
... +. .--++.+.++.+||+++|.-+.
T Consensus 235 qs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 235 TSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp C---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred ecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 110 00 1246888888888888888764
No 342
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.05 E-value=0.053 Score=61.30 Aligned_cols=130 Identities=13% Similarity=0.141 Sum_probs=85.9
Q ss_pred CcEEEEcCCC-ChHHHHHHHHHHHHHHHhccHHHHHHHHHhCCCCCCCCCCCCcceeecCcEEEEEeCChhhHHHHHHHh
Q 007040 104 GLRLIHVDTS-RAEEIADTVMALLLGLLRRTHLLARHALSASGWLGSVQPLCRGMRRCRGLVLGIVGRSASARALATRSL 182 (620)
Q Consensus 104 GI~VtNtpg~-~a~aVAE~aLaLiLal~Rrl~~~~~~~~~~g~W~~~~~~~~~~~~~L~GktVGIIGlG~IG~~vA~~Lk 182 (620)
+-++++-... .....||.++-+-|.++|- .-|.. .+...|++.+|.|||+|.+|..+|+.|.
T Consensus 284 ~~~~~~l~~~~dp~~la~~~~~Lnlklm~w-----------Rllp~------~g~ekL~~arVLIVGaGGLGs~vA~~La 346 (615)
T 4gsl_A 284 APRVVDLSSLLDPLKIADQSVDLNLKLMKW-----------RILPD------LNLDIIKNTKVLLLGAGTLGCYVSRALI 346 (615)
T ss_dssp CCEEEECHHHHCHHHHHHHHHHHHHHHHHH-----------HTCTT------CCHHHHHTCEEEEECCSHHHHHHHHHHH
T ss_pred ceeEEeccccCCHHHHHhhhhhhhhHHHHH-----------hhcch------hhHHHHhCCeEEEECCCHHHHHHHHHHH
Confidence 3456665443 6778899888887776642 12321 2335789999999999999999999999
Q ss_pred hCCC-EEEEECCCCCCCC-------------------------ccccCCc--eec---------------------CCHH
Q 007040 183 SFKM-SVLYFDVPEGKGK-------------------------VTFPSAA--RRM---------------------DTLN 213 (620)
Q Consensus 183 afG~-~V~~~dr~~~~~~-------------------------~~~~~g~--~~~---------------------~sL~ 213 (620)
..|. ++..+|...-... ......+ ... +.+.
T Consensus 347 ~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~ 426 (615)
T 4gsl_A 347 AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLR 426 (615)
T ss_dssp HTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHH
T ss_pred HcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHH
Confidence 9998 8999997541100 0000001 111 1356
Q ss_pred hhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 214 DLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 214 eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
+++..+|+|+.++- +.+++.+++...... +..+|+.+
T Consensus 427 ~ll~~~DlVvd~tD-n~~tR~~ln~~c~~~---~~PlI~aa 463 (615)
T 4gsl_A 427 ALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 463 (615)
T ss_dssp HHHHHCSEEEECCS-SGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred HHhhcCCEEEecCC-CHHHHHHHHHHHHHc---CCeEEEEE
Confidence 77889999988764 667888888766553 44567754
No 343
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.05 E-value=0.02 Score=59.17 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=46.5
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--------CCEEE-EECCCCCCCCccc-cCCc-eecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSF--------KMSVL-YFDVPEGKGKVTF-PSAA-RRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--------G~~V~-~~dr~~~~~~~~~-~~g~-~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
-+|||||+|.||+.-++.++++ +++|. ++|++........ ..++ ..+.+++++|++ .|+|++++|..
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~~ 105 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPNQ 105 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCGG
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCChH
Confidence 4799999999999877766543 56655 6688775543211 1233 356799999974 69999999965
Q ss_pred h
Q 007040 230 D 230 (620)
Q Consensus 230 ~ 230 (620)
-
T Consensus 106 ~ 106 (393)
T 4fb5_A 106 F 106 (393)
T ss_dssp G
T ss_pred H
Confidence 3
No 344
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.04 E-value=0.024 Score=61.02 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=49.8
Q ss_pred cEEEEEeC----ChhhHHHHHHHhhC--CCEE-EEECCCCCCCCccc-cCCc---eecCCHHhhhc--CCcEEEEcccCC
Q 007040 163 LVLGIVGR----SASARALATRSLSF--KMSV-LYFDVPEGKGKVTF-PSAA---RRMDTLNDLLA--ASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl----G~IG~~vA~~Lkaf--G~~V-~~~dr~~~~~~~~~-~~g~---~~~~sL~eLL~--~sDvVil~lPlT 229 (620)
.+|||||+ |.||...++.++.. +++| .++|++........ ..++ ..+.+++++++ +.|+|++++|..
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 57999999 99999999999987 7876 47788764322111 1122 35679999997 589999999954
No 345
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.03 E-value=0.034 Score=57.95 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=59.8
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee---c----CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR---M----DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~---~----~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||...++.++.+|. +|++.+++....+.....|... . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 8999998765433222223211 1 12332222 4788888776
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcCC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTGS 255 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvgR 255 (620)
.. ++ + ...+..++++ ..+|.+|-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RI-ET---M-MNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHHhcCCCEEEEEcc
Confidence 32 11 1 3456777887 77777763
No 346
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.02 E-value=0.04 Score=55.23 Aligned_cols=67 Identities=12% Similarity=0.071 Sum_probs=48.4
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCC----ccccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGK----VTFPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~----~~~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
+++|.|.| .|.||+.+++.|...|++|++.+|...... ........ .+.+.+++..+|+|+.+....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~ 73 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAATR 73 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEccccC
Confidence 36899998 699999999999999999999999832211 00011112 345778888999999887654
No 347
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.02 E-value=0.028 Score=58.40 Aligned_cols=69 Identities=20% Similarity=0.266 Sum_probs=48.3
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCC--CEEEEECCCCCCCC------ccccCCcee---cCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFK--MSVLYFDVPEGKGK------VTFPSAARR---MDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG--~~V~~~dr~~~~~~------~~~~~g~~~---~~sL~eLL~~sDvVil~lPl 228 (620)
..++|+|+| .|.+|..++..|...| .+|..+|....... ......+.. ..++.+.+..||+|+++.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 346899999 8999999999998878 78999997653110 001101111 23567889999999999864
Q ss_pred C
Q 007040 229 T 229 (620)
Q Consensus 229 T 229 (620)
.
T Consensus 87 ~ 87 (326)
T 1smk_A 87 P 87 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 348
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.01 E-value=0.027 Score=58.21 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=34.6
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE 195 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~ 195 (620)
...|++.+|.|||.|.+|..+|..|...|. ++..+|...
T Consensus 31 q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 31 YEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp -CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 457899999999999999999999999997 899998754
No 349
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.01 E-value=0.043 Score=56.82 Aligned_cols=99 Identities=14% Similarity=0.240 Sum_probs=62.2
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCC--CEEEEECCCCCCCC-ccccC-----Ccee---cCCHHhhhcCCcEEEEcccCCh
Q 007040 163 LVLGIVGR-SASARALATRSLSFK--MSVLYFDVPEGKGK-VTFPS-----AARR---MDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG--~~V~~~dr~~~~~~-~~~~~-----g~~~---~~sL~eLL~~sDvVil~lPlT~ 230 (620)
++|+|||. |.+|..++..|...| .+|..+|....... ..+.. .... ..++++.+..||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 47999998 999999999999777 69999998761111 00111 1122 1368888999999999975432
Q ss_pred h---hH--------hhcC--HHHhhccCCCcEEEEcCCChhhcHHH
Q 007040 231 E---TI--------QIIN--AECLQHIKPGAFLVNTGSSQLLDDCA 263 (620)
Q Consensus 231 ~---T~--------~lI~--~~~L~~MK~gAiLINvgRG~vVDe~A 263 (620)
. ++ .++- .+.+....|++++|+++- .+|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN--Pv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN--PVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC--CcchhH
Confidence 1 11 1110 122333458899999744 455444
No 350
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.99 E-value=0.039 Score=56.36 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=48.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhh-CCCEEEE-ECCCCCCC--C---c--cccCCceecCCHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVG-RSASARALATRSLS-FKMSVLY-FDVPEGKG--K---V--TFPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lka-fG~~V~~-~dr~~~~~--~---~--~~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..... . . ....++....++++++.++|+|+-+.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 5799999 99999999998874 4888776 68764321 1 0 011245556899999999999998875
No 351
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=94.97 E-value=0.055 Score=55.73 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=67.6
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCE-EEEECCCCCCCCccccCCceecCCHHhhhc--C-CcEEEEcccCChhhHhhc
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMS-VLYFDVPEGKGKVTFPSAARRMDTLNDLLA--A-SDVISLHCAVTDETIQII 236 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~-V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~-sDvVil~lPlT~~T~~lI 236 (620)
..++.|+|. |++|+.+++.+...|++ |..++|.... . . ..+...+.+++++.. . .|++++++|.. .+...+
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g-~-~-i~G~~vy~sl~el~~~~~~~DvaIi~vp~~-~~~~~v 88 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGG-S-E-VHGVPVYDSVKEALAEHPEINTSIVFVPAP-FAPDAV 88 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT-C-E-ETTEEEESSHHHHHHHCTTCCEEEECCCGG-GHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCC-c-e-ECCEeeeCCHHHHhhcCCCCCEEEEecCHH-HHHHHH
Confidence 345777798 99999999999988998 4466654321 1 1 246677789999987 5 99999999953 333333
Q ss_pred CHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCc
Q 007040 237 NAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTL 273 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I 273 (620)
. +.++.=.+..+++..+- ...+++.|.++.++..+
T Consensus 89 ~-ea~~~Gi~~vVi~t~G~-~~~~~~~l~~~A~~~gi 123 (297)
T 2yv2_A 89 Y-EAVDAGIRLVVVITEGI-PVHDTMRFVNYARQKGA 123 (297)
T ss_dssp H-HHHHTTCSEEEECCCCC-CHHHHHHHHHHHHHHTC
T ss_pred H-HHHHCCCCEEEEECCCC-CHHHHHHHHHHHHHcCC
Confidence 2 23332222233333332 23456778888877655
No 352
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.97 E-value=0.028 Score=58.54 Aligned_cols=90 Identities=14% Similarity=0.084 Sum_probs=59.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee---c----CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR---M----DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~---~----~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|... . .++.+.+. ..|+|+.++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 8999998765433222222211 1 12332222 4688887776
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcCC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTGS 255 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvgR 255 (620)
..+. -...+..++++ ..+|.+|-
T Consensus 270 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKV-----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred cHHH-----HHHHHHhhccCCcEEEEEec
Confidence 3221 13456777887 77777763
No 353
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.89 E-value=0.04 Score=57.56 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=58.7
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCceec-------CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARRM-------DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~~-------~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|.... .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 58899999999999999999999999 89999987654332222222111 12322221 4688887775
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcCC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTGS 255 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvgR 255 (620)
.. .+ + ...+..++++ ..+|.+|-
T Consensus 275 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TA-QT---L-KAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHhhcCCCEEEEECC
Confidence 32 11 1 3456777777 77777654
No 354
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.89 E-value=0.015 Score=58.73 Aligned_cols=88 Identities=16% Similarity=0.090 Sum_probs=57.3
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---c---CCHHhhhcCCcEEEEcccCChhhH
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---M---DTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~---~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
.|.+|.|+|. |.||..+++.++.+|++|++.+++....+.....|... . .++.+.+...|+|+. +.. + +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~-~- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K-E- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T-T-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H-H-
Confidence 5789999998 99999999999999999999998765433222222221 1 112222356788877 653 1 1
Q ss_pred hhcCHHHhhccCCCcEEEEcCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgR 255 (620)
-...+..|+++..+|.+|-
T Consensus 201 ---~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHhhccCCEEEEEeC
Confidence 1345677777777777653
No 355
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.88 E-value=0.035 Score=60.38 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=67.2
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCC-ccccCCceecCCHHhhhcCCcEEEEccc
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGK-VTFPSAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~-~~~~~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
.+.|++|+|+|+- .-...|++.|...|++|.+|||...... ..+...+....++.+.+..+|+|+++++
T Consensus 315 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~ 394 (450)
T 3gg2_A 315 NVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTE 394 (450)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECSC
T ss_pred cCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEccC
Confidence 4789999999984 3478999999999999999999873211 1122224556788999999999999998
Q ss_pred CChhhHhhcCHHHh-hccCCCcEEEEcCCC
Q 007040 228 VTDETIQIINAECL-QHIKPGAFLVNTGSS 256 (620)
Q Consensus 228 lT~~T~~lI~~~~L-~~MK~gAiLINvgRG 256 (620)
..+ - .-++-+.+ +.|+ +.++||+ |+
T Consensus 395 ~~~-f-~~~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 395 WKE-F-RMPDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp CGG-G-SSCCHHHHHHHSS-SCEEEES-SC
T ss_pred CHH-H-hhcCHHHHHHhcC-CCEEEEC-CC
Confidence 652 2 22344444 4465 6688884 54
No 356
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.86 E-value=0.026 Score=57.38 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=48.8
Q ss_pred ceeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCC-ccccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 157 MRRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGK-VTFPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 157 ~~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~-~~~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
...+.+++|.|.|. |.||+.+++.|...|++|+++++...... ............+.+++..+|+|+.+....
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 35688999999997 99999999999999999999998764311 111111122345678889999999877644
No 357
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.86 E-value=0.018 Score=59.85 Aligned_cols=90 Identities=17% Similarity=0.127 Sum_probs=61.7
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCce---ecCC---HHhhhcCCcEEEEcccCChhhH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAAR---RMDT---LNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~~---~~~s---L~eLL~~sDvVil~lPlT~~T~ 233 (620)
.|.+|.|+|.|.||...++.++.+|++|++.+++........ ..|.. ...+ +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 588999999999999999999999999999998764432211 22221 1222 22333457888888864321
Q ss_pred hhcCHHHhhccCCCcEEEEcCC
Q 007040 234 QIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgR 255 (620)
-...+..++++..+|.+|-
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2345677888888888864
No 358
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.84 E-value=0.023 Score=59.89 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=49.9
Q ss_pred ecCcEEEEEeC-ChhhHHHHHHHhhCCC--EEEEECCCCCCCC--------cccc-CCceecCCHHhhhcCCcEEEEccc
Q 007040 160 CRGLVLGIVGR-SASARALATRSLSFKM--SVLYFDVPEGKGK--------VTFP-SAARRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 160 L~GktVGIIGl-G~IG~~vA~~LkafG~--~V~~~dr~~~~~~--------~~~~-~g~~~~~sL~eLL~~sDvVil~lP 227 (620)
+.+++|+|||. |.+|..+|..+..+|. +|..+|....... ..++ ..+....++.+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 35789999998 9999999998888884 8999998643111 0111 122334578888999999999863
No 359
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.83 E-value=0.034 Score=59.43 Aligned_cols=69 Identities=9% Similarity=0.106 Sum_probs=49.4
Q ss_pred CcEEEEEeCCh---hhHHHHHHHhhCC-CEEE--EECCCCCCCCcc-ccCCc---eecCCHHhhhcC-------CcEEEE
Q 007040 162 GLVLGIVGRSA---SARALATRSLSFK-MSVL--YFDVPEGKGKVT-FPSAA---RRMDTLNDLLAA-------SDVISL 224 (620)
Q Consensus 162 GktVGIIGlG~---IG~~vA~~LkafG-~~V~--~~dr~~~~~~~~-~~~g~---~~~~sL~eLL~~-------sDvVil 224 (620)
-.+|||||+|. ||...+..++..+ ++|. ++|+++...... ...++ ..+.+++++++. .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35799999999 9999988887665 6765 568876433211 11233 456799999976 899999
Q ss_pred cccCCh
Q 007040 225 HCAVTD 230 (620)
Q Consensus 225 ~lPlT~ 230 (620)
++|...
T Consensus 117 ~tp~~~ 122 (417)
T 3v5n_A 117 VTPNHV 122 (417)
T ss_dssp CSCTTS
T ss_pred CCCcHH
Confidence 999663
No 360
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.83 E-value=0.011 Score=61.21 Aligned_cols=90 Identities=12% Similarity=0.061 Sum_probs=55.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee---c--CCHHhhh------cCCcEEEEcccC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR---M--DTLNDLL------AASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~---~--~sL~eLL------~~sDvVil~lPl 228 (620)
.|.+|.|+|.|.||..+++.++.+|+ +|++.+++....+.....|... . .++.+.+ ...|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 9999998753322111112110 0 1222211 136777776653
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
.+.. ...+..|+++..+|.+|.
T Consensus 247 ~~~~-----~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKAL-----EQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHHH-----HHHHHHEEEEEEEEECCC
T ss_pred HHHH-----HHHHHHHhcCCEEEEEcc
Confidence 2111 234556666666666653
No 361
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.82 E-value=0.038 Score=55.01 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=30.7
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
+++|.|.|. |.||+.+++.|...|++|++.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 467999995 9999999999999999999999875
No 362
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.80 E-value=0.027 Score=55.68 Aligned_cols=68 Identities=24% Similarity=0.147 Sum_probs=47.4
Q ss_pred CcEEEEEeCChhhHHHHHHH--hhCCCEEE-EECCCCC-CCCc-cc-cCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRS--LSFKMSVL-YFDVPEG-KGKV-TF-PSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~L--kafG~~V~-~~dr~~~-~~~~-~~-~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
..+++|||.|++|+.+++.+ ...|+++. ++|..+. .... .. ...+...+++++++++ .|++++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 45799999999999999984 45688866 5677665 3222 11 1223345788888875 89999999954
No 363
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.79 E-value=0.084 Score=58.02 Aligned_cols=97 Identities=12% Similarity=0.222 Sum_probs=70.6
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.+.|++|+|+|+- .-...|++.|...|++|.+|||.... ++ ......++++.+..+|+|+++++.
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~----~~-~~~~~~~~~~~~~~ad~vvi~t~~ 424 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN----YP-GVEISDNLEEVVRNADAIVVLAGH 424 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC----BT-TBCEESCHHHHHTTCSEEEECSCC
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc----cc-CcceecCHHHHHhcCCEEEEecCC
Confidence 4789999999974 34689999999999999999998752 11 123356899999999999999985
Q ss_pred ChhhHhhcCHHH-hhccC-CCcEEEEcCCChhhcHHHH
Q 007040 229 TDETIQIINAEC-LQHIK-PGAFLVNTGSSQLLDDCAV 264 (620)
Q Consensus 229 T~~T~~lI~~~~-L~~MK-~gAiLINvgRG~vVDe~AL 264 (620)
. +-+ -++-+. .+.|+ +..++||+ |+ ++|.+.+
T Consensus 425 ~-~f~-~~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 425 S-AYS-SLKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp H-HHH-SCCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred H-HHH-hhhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 5 222 244443 44677 47899994 65 3455444
No 364
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.78 E-value=0.027 Score=59.65 Aligned_cols=95 Identities=12% Similarity=0.021 Sum_probs=56.2
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCceec-----CCHH----hhhc--CCcEEEEcccC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARRM-----DTLN----DLLA--ASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~~-----~sL~----eLL~--~sDvVil~lPl 228 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|.... .++. ++.. ..|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 68899999999999999999999999 99999987643331111222110 1221 1211 36777777764
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
...+...+-.-+...++++..+|.+|-
T Consensus 293 ~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 293 PQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred cHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 322221111111122377777777764
No 365
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=94.77 E-value=0.067 Score=56.87 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=67.1
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHhhcCHHHh
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQIINAECL 241 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L 241 (620)
-.++.|+|.|.+|+++|+.++.+|++|+++|+++.... .+-+..+|-|+..-| .+.+
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~-------------~~~fp~a~~v~~~~p----------~~~~ 255 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE-------------KHFFPDADEIIVDFP----------ADFL 255 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC-------------GGGCTTCSEEEESCH----------HHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc-------------cccCCCceEEecCCH----------HHHH
Confidence 34699999999999999999999999999998763211 122345665555444 1123
Q ss_pred hc--cCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEe
Q 007040 242 QH--IKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCAL 278 (620)
Q Consensus 242 ~~--MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaL 278 (620)
.. +.+++.+|=+.++.-.|...|..+|+. .....++
T Consensus 256 ~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~ 293 (362)
T 3on5_A 256 RKFLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGI 293 (362)
T ss_dssp HHSCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEE
T ss_pred hhcCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEE
Confidence 33 667888888899999999999998876 4443443
No 366
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.77 E-value=0.063 Score=55.74 Aligned_cols=94 Identities=12% Similarity=0.161 Sum_probs=60.6
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCC-------EEEEECCC----CC----------CCCccccCCceecCCHHhhhcCC
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKM-------SVLYFDVP----EG----------KGKVTFPSAARRMDTLNDLLAAS 219 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~-------~V~~~dr~----~~----------~~~~~~~~g~~~~~sL~eLL~~s 219 (620)
.++|.|+|. |.||..++..|...|+ +|..+|+. .. +....+...+....++.+.++.|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 468999997 9999999999988775 89999987 21 10001111223346788999999
Q ss_pred cEEEEcccCChh---hHh-hc--C-------HHHhhcc-CCCcEEEEcCC
Q 007040 220 DVISLHCAVTDE---TIQ-II--N-------AECLQHI-KPGAFLVNTGS 255 (620)
Q Consensus 220 DvVil~lPlT~~---T~~-lI--~-------~~~L~~M-K~gAiLINvgR 255 (620)
|+|+++...... ++. ++ | .+.+... +|.++||+++-
T Consensus 85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999987653321 110 10 1 1223334 47889999974
No 367
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=94.73 E-value=0.039 Score=56.09 Aligned_cols=72 Identities=15% Similarity=0.054 Sum_probs=47.7
Q ss_pred eeecCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcccc--CCc-------eecCCHHhhhcC--CcEEEEc
Q 007040 158 RRCRGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFP--SAA-------RRMDTLNDLLAA--SDVISLH 225 (620)
Q Consensus 158 ~~L~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~--~g~-------~~~~sL~eLL~~--sDvVil~ 225 (620)
..+.+++|.|.| .|.||+.+++.|...|++|+++++.......... .++ ...+.+.+++.. .|+|+.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 457889999998 6999999999999999999999987533211110 111 111235566766 8998887
Q ss_pred ccCC
Q 007040 226 CAVT 229 (620)
Q Consensus 226 lPlT 229 (620)
....
T Consensus 97 A~~~ 100 (333)
T 2q1w_A 97 AASY 100 (333)
T ss_dssp CCCC
T ss_pred ceec
Confidence 7543
No 368
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.73 E-value=0.034 Score=58.63 Aligned_cols=39 Identities=8% Similarity=0.137 Sum_probs=34.9
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE 195 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~ 195 (620)
...|.+++|.|||.|.+|..+|..|...|. ++..+|...
T Consensus 113 q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 113 QDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 357899999999999999999999999998 888888753
No 369
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.72 E-value=0.02 Score=59.57 Aligned_cols=97 Identities=8% Similarity=0.067 Sum_probs=60.5
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCC-cccc--CCc--------eecCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGK-VTFP--SAA--------RRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~-~~~~--~g~--------~~~~sL~eLL~~sDvVil~lPl 228 (620)
.+++|.|.| .|.||+.+++.|...|++|++.+|+..... .... .++ ...+++.+++..+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899998 599999999999999999999998764320 0000 011 1122366778899999977654
Q ss_pred ChhhHhhcCHHHhhccCC-C--cEEEEcCCCh
Q 007040 229 TDETIQIINAECLQHIKP-G--AFLVNTGSSQ 257 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~-g--AiLINvgRG~ 257 (620)
............+..++. | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311112222334444422 3 4788887753
No 370
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.71 E-value=0.026 Score=58.29 Aligned_cols=90 Identities=12% Similarity=0.072 Sum_probs=59.3
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce---e---cCCHHhhhc-----CCcEEEEcccC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR---R---MDTLNDLLA-----ASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~---~---~~sL~eLL~-----~sDvVil~lPl 228 (620)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.....+.. . ..++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5889999999 8999999999999999999999876433211111211 1 123333332 46888877763
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
.+. -...+..|+++..+|++|.
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeC
Confidence 221 1345667788888888765
No 371
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.68 E-value=0.03 Score=56.55 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=33.7
Q ss_pred ecCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 160 CRGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 160 L~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
+.|+++.|+| .|.||+++|..|...|++|++++|+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 5789999999 99999999999999999999999875
No 372
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.67 E-value=0.018 Score=60.23 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=49.3
Q ss_pred CcEEEEEeCChhhH-HHHHHHhhCCCEEE-EECCCCCCCCcc-ccCC-ceecCCHHhhhcC--CcEEEEcccCC
Q 007040 162 GLVLGIVGRSASAR-ALATRSLSFKMSVL-YFDVPEGKGKVT-FPSA-ARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~-~vA~~LkafG~~V~-~~dr~~~~~~~~-~~~g-~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
-.+|||||+|.||. .++..+..-+++|. ++|+++...... ...+ ...+.++++++++ .|+|++++|..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 35799999999995 57777777899855 678876433211 1122 3456899999986 89999999954
No 373
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.67 E-value=0.054 Score=56.62 Aligned_cols=111 Identities=13% Similarity=0.099 Sum_probs=70.7
Q ss_pred cEEEEEeCChhhHHHHHHHhh---------CCCEEEEE-CCCCCCCCc-c----cc---CCceecC--CHHhhhcC--Cc
Q 007040 163 LVLGIVGRSASARALATRSLS---------FKMSVLYF-DVPEGKGKV-T----FP---SAARRMD--TLNDLLAA--SD 220 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka---------fG~~V~~~-dr~~~~~~~-~----~~---~g~~~~~--sL~eLL~~--sD 220 (620)
.+|||||+|.||+.+++.+.. .+++|.++ |++...... . +. ....... ++++++.+ .|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 369999999999999999975 47776654 665422111 0 00 0111223 88999864 89
Q ss_pred EEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhh-cHHHHHHHHHcCCcc
Q 007040 221 VISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLL-DDCAVKQLLIDGTLA 274 (620)
Q Consensus 221 vVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vV-De~AL~~AL~~G~I~ 274 (620)
+|+.++|....+.. .-.-....|+.|.-+|...-+.+. ..+.|.++.++....
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996633222 112346678889888887666654 566777777766553
No 374
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.64 E-value=0.0092 Score=56.32 Aligned_cols=36 Identities=8% Similarity=-0.042 Sum_probs=32.6
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.|++|.|+| .|.||..+++.++..|++|++.+++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~ 74 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 74 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 588999999 699999999999999999999998653
No 375
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=94.61 E-value=0.11 Score=54.68 Aligned_cols=96 Identities=10% Similarity=0.066 Sum_probs=68.6
Q ss_pred eecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCC--CCccc---------c--CC--ceecCCHHhhhcCCcE
Q 007040 159 RCRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGK--GKVTF---------P--SA--ARRMDTLNDLLAASDV 221 (620)
Q Consensus 159 ~L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~--~~~~~---------~--~g--~~~~~sL~eLL~~sDv 221 (620)
.+.|.+|+|||=| ++..+++..+..||++|.+..|..-. ..... . .| +....++++.++.+||
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 4789999999986 88899999999999999999986533 21100 0 12 3456799999999999
Q ss_pred EEEc----ccCCh----h-----hHhhcCHHHhhccCCCcEEEEcC
Q 007040 222 ISLH----CAVTD----E-----TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 222 Vil~----lPlT~----~-----T~~lI~~~~L~~MK~gAiLINvg 254 (620)
|..- +...+ + ..--++.+.++.+|++++|.-+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 9863 22111 1 11236888999999999888764
No 376
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.61 E-value=0.071 Score=58.28 Aligned_cols=64 Identities=25% Similarity=0.266 Sum_probs=49.0
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
+++|.|.| .|.||+.+++.|...|++|++++++........ ....+.+.+++..+|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~---~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF---WDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEE---CCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcccee---ecccchhHHhcCCCCEEEECCCC
Confidence 78999999 799999999999999999999999875432111 11123456778899999987664
No 377
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.59 E-value=0.036 Score=56.28 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=50.6
Q ss_pred eeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCC---ccccCCc-------eecCCHHhhhc--CCcEEEE
Q 007040 158 RRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGK---VTFPSAA-------RRMDTLNDLLA--ASDVISL 224 (620)
Q Consensus 158 ~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~---~~~~~g~-------~~~~sL~eLL~--~sDvVil 224 (620)
..+.|++|.|.|. |.||+.+++.|...|++|+++++...... ... .++ ...+++.+++. ..|+|+.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 4578999999986 99999999999999999999998653321 000 111 11223556777 8899988
Q ss_pred cccCC
Q 007040 225 HCAVT 229 (620)
Q Consensus 225 ~lPlT 229 (620)
+....
T Consensus 95 ~A~~~ 99 (330)
T 2pzm_A 95 SAAAY 99 (330)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 77643
No 378
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.59 E-value=0.039 Score=55.82 Aligned_cols=39 Identities=18% Similarity=0.023 Sum_probs=35.2
Q ss_pred ceeecCcEEEEEeCC---hhhHHHHHHHhhCCCEEEEECCCC
Q 007040 157 MRRCRGLVLGIVGRS---ASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 157 ~~~L~GktVGIIGlG---~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
+..+.|+++.|.|.+ .||+++|+.|...|++|++.+++.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 356899999999986 899999999999999999999875
No 379
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.59 E-value=0.015 Score=60.17 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=50.0
Q ss_pred CcEEEEEeCC-hhhHHHHHHHhhC--CCEE-EEECCCCCCCCccc-cCCc-eecCCHHhhhc--CCcEEEEcccCC
Q 007040 162 GLVLGIVGRS-ASARALATRSLSF--KMSV-LYFDVPEGKGKVTF-PSAA-RRMDTLNDLLA--ASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG-~IG~~vA~~Lkaf--G~~V-~~~dr~~~~~~~~~-~~g~-~~~~sL~eLL~--~sDvVil~lPlT 229 (620)
-.+|||||+| .+|+..+..++.. +++| .++|+++....... ..+. ..+.+++++++ +.|+|++++|..
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 3579999999 8999999999876 5776 57788764332111 1133 45689999997 589999999954
No 380
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.54 E-value=0.043 Score=56.73 Aligned_cols=90 Identities=10% Similarity=0.054 Sum_probs=58.1
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce---ec---CC-HHhh---h-----cCCcEEEEc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR---RM---DT-LNDL---L-----AASDVISLH 225 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~---~~---~s-L~eL---L-----~~sDvVil~ 225 (620)
.|.+|.|+|.|.||..+++.++.+|++|++.+++....+.....|.. .. .+ .+++ . ...|+|+.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 57899999999999999999999999999998775432211112211 11 11 1222 2 247888877
Q ss_pred ccCChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 226 CAVTDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 226 lPlT~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
+..... -...+..++++..+|.+|-
T Consensus 248 ~g~~~~-----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGNEKC-----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCHHH-----HHHHHHHSCTTCEEEECSC
T ss_pred CCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 763211 1335677788888887764
No 381
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.54 E-value=0.013 Score=62.08 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=50.7
Q ss_pred CcEEEEEeCCh---hhHHHHHHHhhCC-CEEE--EECCCCCCCCcc-ccCCc---eecCCHHhhhcC-------CcEEEE
Q 007040 162 GLVLGIVGRSA---SARALATRSLSFK-MSVL--YFDVPEGKGKVT-FPSAA---RRMDTLNDLLAA-------SDVISL 224 (620)
Q Consensus 162 GktVGIIGlG~---IG~~vA~~LkafG-~~V~--~~dr~~~~~~~~-~~~g~---~~~~sL~eLL~~-------sDvVil 224 (620)
-.+|||||+|. ||+..+..++..+ ++|. ++|+++...... ...++ ..+.+++++++. .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 35799999999 9999998887665 6776 468876433311 11233 456799999975 899999
Q ss_pred cccCCh
Q 007040 225 HCAVTD 230 (620)
Q Consensus 225 ~lPlT~ 230 (620)
++|...
T Consensus 92 ~tp~~~ 97 (398)
T 3dty_A 92 ATPNGT 97 (398)
T ss_dssp ESCGGG
T ss_pred CCCcHH
Confidence 999653
No 382
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.52 E-value=0.039 Score=57.69 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=58.1
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCceec-------CCHHhhhc-----CCcEEEEccc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARRM-------DTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~~-------~sL~eLL~-----~sDvVil~lP 227 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|.... .++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 89999987755442223332211 12222221 3677777766
Q ss_pred CChhhHhhcCHHHhhccCCC-cEEEEcC
Q 007040 228 VTDETIQIINAECLQHIKPG-AFLVNTG 254 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~g-AiLINvg 254 (620)
..+. -...+..++++ ..+|.+|
T Consensus 273 ~~~~-----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NVSV-----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECS
T ss_pred CHHH-----HHHHHHHhhccCCEEEEEc
Confidence 3211 12356667775 7777765
No 383
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.49 E-value=0.028 Score=58.40 Aligned_cols=90 Identities=12% Similarity=0.102 Sum_probs=58.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCce---ecC-----CH-Hhhh----cCCcEEEEcc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAAR---RMD-----TL-NDLL----AASDVISLHC 226 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~---~~~-----sL-~eLL----~~sDvVil~l 226 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|.. ... ++ +++. ...|+|+.++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 57899999999999999999999999 999999876432211122221 111 11 1111 2478888777
Q ss_pred cCChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 227 AVTDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 227 PlT~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
..... + ...+..++++..+|.+|-
T Consensus 251 g~~~~----~-~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEAS----I-QAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHHH----H-HHHHHHSCTTCEEEECSC
T ss_pred CChHH----H-HHHHHHhcCCCEEEEEec
Confidence 63211 1 345677788888887764
No 384
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.49 E-value=0.027 Score=60.37 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=47.5
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc-----eecCCHHhhhcCCcEEE
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA-----RRMDTLNDLLAASDVIS 223 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~-----~~~~sL~eLL~~sDvVi 223 (620)
-+.|++|+|||-|.+|+.+++.++.+|++|+++|+++........+.. ...+.+.+++..+|+|+
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 358999999999999999999999999999999987643221111111 11223556677899998
No 385
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.46 E-value=0.049 Score=54.72 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=30.7
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.++|.|+| .|.||+.+++.|...|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 46799999 59999999999999999999999875
No 386
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=94.43 E-value=0.13 Score=54.63 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=65.3
Q ss_pred eeecCcEEEEEeCC-hhhHHHHHHHhhCCCEEEEECCCCCCCCccc-------------cCCceecCCHHhhhcCCcEEE
Q 007040 158 RRCRGLVLGIVGRS-ASARALATRSLSFKMSVLYFDVPEGKGKVTF-------------PSAARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 158 ~~L~GktVGIIGlG-~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-------------~~g~~~~~sL~eLL~~sDvVi 223 (620)
..|.|.+|+|||=+ ++..+++..+..||++|.+..|..-.....+ ...+....+++++++.+|||.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvy 263 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIV 263 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEE
Confidence 34799999999976 5777888888899999999998653222110 113445679999999999998
Q ss_pred Ecc--cCChh--h--------HhhcCHHHhhc--cCCCcEEEEcC
Q 007040 224 LHC--AVTDE--T--------IQIINAECLQH--IKPGAFLVNTG 254 (620)
Q Consensus 224 l~l--PlT~~--T--------~~lI~~~~L~~--MK~gAiLINvg 254 (620)
.-. +...+ . ..-|+.+.++. +|++++|.-+.
T Consensus 264 td~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 264 TDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp ECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred eCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 743 22211 0 12357777777 77777777653
No 387
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.43 E-value=0.021 Score=58.78 Aligned_cols=87 Identities=13% Similarity=0.108 Sum_probs=59.6
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCce-------ecCCHHhh-hcCCcEEEEcccCChhhH
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAAR-------RMDTLNDL-LAASDVISLHCAVTDETI 233 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~-------~~~sL~eL-L~~sDvVil~lPlT~~T~ 233 (620)
.+++.|+|+|.+|+.+|+.|...|. |++.|+++.... ....+.. ..+.|.++ +.+||.|+++++.. ..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~ 190 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SE 190 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HH
Confidence 5679999999999999999999999 999998875432 1112221 11234444 77899999998854 33
Q ss_pred hhcCHHHhhccCCCcEEEE
Q 007040 234 QIINAECLQHIKPGAFLVN 252 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLIN 252 (620)
+++-...+..+.+...+|-
T Consensus 191 n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 191 TIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 4444556677777744443
No 388
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.39 E-value=0.057 Score=55.81 Aligned_cols=110 Identities=13% Similarity=-0.036 Sum_probs=65.7
Q ss_pred CcEEEEEeCChhhHH-HHHHHhhCCCEEEEECCCCCCCC--ccccCCceec--CCHHhhh-cCCcEEEEc--ccC-Chhh
Q 007040 162 GLVLGIVGRSASARA-LATRSLSFKMSVLYFDVPEGKGK--VTFPSAARRM--DTLNDLL-AASDVISLH--CAV-TDET 232 (620)
Q Consensus 162 GktVGIIGlG~IG~~-vA~~LkafG~~V~~~dr~~~~~~--~~~~~g~~~~--~sL~eLL-~~sDvVil~--lPl-T~~T 232 (620)
.++|.|||.|.+|.+ +|+.|+..|++|.++|....... .....|+... .+.+++. ..+|+|+.. +|. .|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 468999999999996 99999999999999998753211 1111233221 2344554 478998885 332 2321
Q ss_pred H-----h--hcCH-HHhhc--cCCCc-EEEEcCCChhhcHHHHHHHHHcC
Q 007040 233 I-----Q--IINA-ECLQH--IKPGA-FLVNTGSSQLLDDCAVKQLLIDG 271 (620)
Q Consensus 233 ~-----~--lI~~-~~L~~--MK~gA-iLINvgRG~vVDe~AL~~AL~~G 271 (620)
. + ++.. +.|.. ++... +-|--+-|+.--..-+...|+..
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 1 1 2332 33343 33222 33333457777776677777653
No 389
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.38 E-value=0.074 Score=53.15 Aligned_cols=37 Identities=14% Similarity=-0.020 Sum_probs=33.6
Q ss_pred eecCcEEEEEeC---ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVGR---SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIGl---G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.+.|+++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 378999999997 6999999999999999999999875
No 390
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.37 E-value=0.063 Score=52.24 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=58.6
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCC----cEEEEcccCCh-h--hH-
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAAS----DVISLHCAVTD-E--TI- 233 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~s----DvVil~lPlT~-~--T~- 233 (620)
+++.|.| .|.||+++|+.|...|++|++.+++...............+++++++... |+|+.+.-... . -.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 3566665 57999999999999999999999876443211111112223455666544 99998875443 0 00
Q ss_pred -------h--hcCHHHhhccCC--CcEEEEcCCChhh
Q 007040 234 -------Q--IINAECLQHIKP--GAFLVNTGSSQLL 259 (620)
Q Consensus 234 -------~--lI~~~~L~~MK~--gAiLINvgRG~vV 259 (620)
+ .+....+..|++ ...|||++.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 112334555533 3788888876543
No 391
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.37 E-value=0.091 Score=51.67 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=33.0
Q ss_pred eecCcEEEEEeC-Ch--hhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVGR-SA--SARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIGl-G~--IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
++.|+++.|.|. |. ||+++|+.|...|++|++.+++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 478999999997 44 99999999999999999998864
No 392
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.37 E-value=0.034 Score=62.69 Aligned_cols=93 Identities=11% Similarity=0.107 Sum_probs=63.8
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCC-------------------------ccccCCc--ee-
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGK-------------------------VTFPSAA--RR- 208 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~-------------------------~~~~~g~--~~- 208 (620)
..|.+.+|.|||+|.+|..+|+.|...|. ++..+|...-... ......+ ..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 56899999999999999999999999998 8999976421000 0000011 00
Q ss_pred --------------------cCCHHhhhcCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 209 --------------------MDTLNDLLAASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 209 --------------------~~sL~eLL~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.+.+++++.++|+|+.++. +.+++.+++...... +..+|+.+
T Consensus 403 ~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 403 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp CCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 1234678889999999875 557788888766553 34666654
No 393
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.35 E-value=0.06 Score=56.48 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=42.6
Q ss_pred EEEEEeCChhhHHHHHHHhhC-CCEEEEE-CCCCCCCCcc-ccCC-----------------ceecCCHHhhhcCCcEEE
Q 007040 164 VLGIVGRSASARALATRSLSF-KMSVLYF-DVPEGKGKVT-FPSA-----------------ARRMDTLNDLLAASDVIS 223 (620)
Q Consensus 164 tVGIIGlG~IG~~vA~~Lkaf-G~~V~~~-dr~~~~~~~~-~~~g-----------------~~~~~sL~eLL~~sDvVi 223 (620)
+|||+|+|.||+.+++.|... +++|.+. |+........ ...+ +....++++++..+|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 699999999999999999865 5777655 4442211000 0001 111224556667899999
Q ss_pred EcccCC
Q 007040 224 LHCAVT 229 (620)
Q Consensus 224 l~lPlT 229 (620)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999965
No 394
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.33 E-value=0.025 Score=59.01 Aligned_cols=68 Identities=18% Similarity=0.117 Sum_probs=46.1
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEEEE-CCCCCCCCccc-cCC------------------ceecCCHHhhhcCCcE
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVLYF-DVPEGKGKVTF-PSA------------------ARRMDTLNDLLAASDV 221 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~-dr~~~~~~~~~-~~g------------------~~~~~sL~eLL~~sDv 221 (620)
.+|||+|+|.||+.+++.+... +++|.++ |+......... ..| .....++++++..+|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3799999999999999999865 5676654 55432111000 001 1223578888889999
Q ss_pred EEEcccCCh
Q 007040 222 ISLHCAVTD 230 (620)
Q Consensus 222 Vil~lPlT~ 230 (620)
|+.|+|..-
T Consensus 83 V~~aTp~~~ 91 (334)
T 2czc_A 83 IVDATPGGI 91 (334)
T ss_dssp EEECCSTTH
T ss_pred EEECCCccc
Confidence 999999653
No 395
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.29 E-value=0.064 Score=53.93 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=45.3
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcc----ccCCce-------ecCCHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVT----FPSAAR-------RMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~----~~~g~~-------~~~sL~eLL~~sDvVil~lP 227 (620)
++|.|+| .|.||+.+++.|...|++|++.+|+....... ...++. ..+++.+++..+|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4799999 59999999999999999999999876411100 011111 12345667778888887765
No 396
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.23 E-value=0.18 Score=51.55 Aligned_cols=38 Identities=3% Similarity=-0.018 Sum_probs=35.5
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.++.|++|.|||.|.+|...++.|...|++|+++++..
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46899999999999999999999999999999999765
No 397
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.23 E-value=0.12 Score=51.18 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=34.0
Q ss_pred ceeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCC
Q 007040 157 MRRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVP 194 (620)
Q Consensus 157 ~~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~ 194 (620)
|..+.|+++.|.|. |.||+++|+.|...|++|++++++
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 45689999999975 689999999999999999999886
No 398
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.20 E-value=0.02 Score=59.67 Aligned_cols=36 Identities=11% Similarity=-0.044 Sum_probs=33.2
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.|.+|.|+|.|.||...++.++.+|++|++.+++..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 224 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE 224 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch
Confidence 588999999999999999999999999999998753
No 399
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=94.19 E-value=0.077 Score=54.26 Aligned_cols=35 Identities=20% Similarity=0.027 Sum_probs=29.3
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
+++|.|.| .|.||+.+++.|...|++|+++++...
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS 36 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 36789998 599999999999999999999998753
No 400
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=94.19 E-value=0.04 Score=54.39 Aligned_cols=37 Identities=16% Similarity=0.026 Sum_probs=33.6
Q ss_pred eecCcEEEEEeC---ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVGR---SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIGl---G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.+.|+++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999997 6999999999999999999999875
No 401
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=94.17 E-value=0.079 Score=53.43 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=34.4
Q ss_pred eeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 158 RRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 158 ~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.++.|+++.|.|. |.||+++|+.|...|++|++.+++..
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4678999999975 78999999999999999999988753
No 402
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.17 E-value=0.061 Score=53.83 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=45.3
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcc----ccCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVT----FPSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~----~~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.-++|.|.| .|.||+.+++.|...|++|+++++.... ... ..........+.+++.. .|+|+.+....
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 345677775 6999999999999999999999987643 110 00001112345566665 79999887654
No 403
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.14 E-value=0.035 Score=55.05 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=33.8
Q ss_pred eecCcEEEEEe---CChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVG---RSASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIG---lG~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.+.|+++.|.| .|.||+++|+.|...|++|++.+++.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 46899999999 59999999999999999999999875
No 404
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.12 E-value=0.027 Score=58.07 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=47.3
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEE-EECCCCC-CCCcc------ccCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVL-YFDVPEG-KGKVT------FPSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~-~~dr~~~-~~~~~------~~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.+|||||+|.||...++.+ .-+++|. ++|++.. ..... +..+...+.++++++++ .|+|++++|..
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFS 78 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcc
Confidence 4799999999999777777 6678876 5787762 22211 11123567899999975 89999999854
No 405
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=94.11 E-value=0.063 Score=51.33 Aligned_cols=69 Identities=9% Similarity=0.050 Sum_probs=49.2
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhC--CCEEEEECCCCCCCCc------cccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSF--KMSVLYFDVPEGKGKV------TFPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~------~~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
.+++|.|.| .|.||+.+++.|... |++|++.+|+...... .........+++.+++...|+|+.+....
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV 80 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence 578899998 699999999999988 8999999987532110 01111112235677888999999887643
No 406
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=94.11 E-value=0.02 Score=60.69 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=48.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC---------CCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhc--CCcEEEEcccC
Q 007040 163 LVLGIVGRSASARALATRSLSF---------KMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLA--ASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf---------G~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~--~sDvVil~lPl 228 (620)
.+|||||+|.||+..++.++.. +++|. ++|+++...... ...++ ..+.+++++|+ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4799999999999988888753 45655 568876433211 11223 35679999996 47999999996
Q ss_pred Ch
Q 007040 229 TD 230 (620)
Q Consensus 229 T~ 230 (620)
.-
T Consensus 107 ~~ 108 (412)
T 4gqa_A 107 HL 108 (412)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 407
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=94.11 E-value=0.054 Score=53.18 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=60.1
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-ccCCceecCCHHhhhc-------CCcEEEEcccCC
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVT-FPSAARRMDTLNDLLA-------ASDVISLHCAVT 229 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-~~~g~~~~~sL~eLL~-------~sDvVil~lPlT 229 (620)
+-.|+++.|.|. |.||+++|+.|...|++|++.+++....... ....+...+++++++. ..|+|+.+.-..
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW 98 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 345889999985 6899999999999999999999987543311 1011111223444443 349998876421
Q ss_pred -------hhhH----hh----------cCHHHhhccCCCcEEEEcCCCh
Q 007040 230 -------DETI----QI----------INAECLQHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 230 -------~~T~----~l----------I~~~~L~~MK~gAiLINvgRG~ 257 (620)
..+. .+ +....+..|+++..|||++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 99 SGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 1110 11 1234556677777888887654
No 408
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.10 E-value=0.035 Score=57.19 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=56.6
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccC--Cceec--CCHHhhhc-----CCcEEEEcccCCh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPS--AARRM--DTLNDLLA-----ASDVISLHCAVTD 230 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~--g~~~~--~sL~eLL~-----~sDvVil~lPlT~ 230 (620)
.|.+|.|+|.|.||..+++.++.+|+ +|++.+++....+..... .+... .++.+.+. ..|+|+.++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68899999999999999999999999 999999875332211111 01111 12222222 4677777766322
Q ss_pred hhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 231 ETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 231 ~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
.. ...+..|+++..+|.+|.
T Consensus 244 ~~-----~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 AI-----HQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHhcCCEEEEEec
Confidence 11 334566777777777653
No 409
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.09 E-value=0.41 Score=49.74 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=50.8
Q ss_pred ecCcEEEEEeC---ChhhHHHHHHHhhC-CCEEEEECCCCCCCCcc-----ccCC--ceecCCHHhhhcCCcEEEEc
Q 007040 160 CRGLVLGIVGR---SASARALATRSLSF-KMSVLYFDVPEGKGKVT-----FPSA--ARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 160 L~GktVGIIGl---G~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~-----~~~g--~~~~~sL~eLL~~sDvVil~ 225 (620)
+.|.+|++||= |++..+++..+..| |++|.+..|..-..... ...| +....+++++++.+|||...
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 68999999998 48999999999999 99999999864322111 1112 23467999999999999974
No 410
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=94.07 E-value=0.18 Score=53.10 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=64.6
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
.+.|.+|+|||= +++..+++..+..||++|.+..|..-.....+ ..| +....+++ .++.+|||..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 378999999986 67888999999999999999998653322111 112 34567899 999999999733
Q ss_pred --cCC------hh----hH--hhcCHHHhhccCCCcEEEEcC
Q 007040 227 --AVT------DE----TI--QIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 227 --PlT------~~----T~--~lI~~~~L~~MK~gAiLINvg 254 (620)
... .+ .. --|+.+.++.+||+++|.-+.
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 110 11 01 235667777777777776653
No 411
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.05 E-value=0.083 Score=57.38 Aligned_cols=96 Identities=8% Similarity=0.077 Sum_probs=67.5
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCC--ccc-------c----CCceecCCHHhh
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGK--VTF-------P----SAARRMDTLNDL 215 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~--~~~-------~----~g~~~~~sL~eL 215 (620)
.+.|++|+|+|+. .-...|++.|...|++|.+|||...... ..+ + .++....++.+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 3789999999986 3688999999999999999999853221 000 0 023344578889
Q ss_pred hcCCcEEEEcccCChhhHhhcCHHHh-hccCCCcEEEEcCCCh
Q 007040 216 LAASDVISLHCAVTDETIQIINAECL-QHIKPGAFLVNTGSSQ 257 (620)
Q Consensus 216 L~~sDvVil~lPlT~~T~~lI~~~~L-~~MK~gAiLINvgRG~ 257 (620)
+..+|+|++++... +-+ -++-+.+ ..|+...+++++ |+-
T Consensus 406 ~~~ad~~vi~t~~~-~f~-~~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFK-ELDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp HTTCSEEEECSCCG-GGG-GSCHHHHHHHSCSSCEEEES-SCT
T ss_pred HhCCcEEEEecCCh-hhh-cCCHHHHHHhcCCCCEEEeC-CCc
Confidence 99999999999875 333 2354444 567766668875 553
No 412
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.04 E-value=0.066 Score=55.28 Aligned_cols=98 Identities=17% Similarity=0.166 Sum_probs=59.9
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCC--EEEEECCCCCCCC----------ccccC--CceecCCHHhhhcCCcEEEEccc-
Q 007040 163 LVLGIVGRSASARALATRSLSFKM--SVLYFDVPEGKGK----------VTFPS--AARRMDTLNDLLAASDVISLHCA- 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~--~V~~~dr~~~~~~----------~~~~~--g~~~~~sL~eLL~~sDvVil~lP- 227 (620)
++|+|||.|.||+.+|-.|...+. ++..||....... ..... .+....+. +.++.||+|++..-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-HHhCCCCEEEEecCC
Confidence 579999999999999998876554 8999998752111 00111 11122233 56889999999873
Q ss_pred -CCh-hhHh-hc--CH-------HHhhccCCCcEEEEcCCChhhcHHH
Q 007040 228 -VTD-ETIQ-II--NA-------ECLQHIKPGAFLVNTGSSQLLDDCA 263 (620)
Q Consensus 228 -lT~-~T~~-lI--~~-------~~L~~MK~gAiLINvgRG~vVDe~A 263 (620)
-.| .|+. ++ |. +.+..-.|+++++.++-. +|.-.
T Consensus 80 prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP--vd~~t 125 (294)
T 2x0j_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP--MDVMT 125 (294)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS--HHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc--chhhH
Confidence 332 1222 22 22 234445678888888653 44433
No 413
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.02 E-value=0.13 Score=53.44 Aligned_cols=100 Identities=15% Similarity=0.224 Sum_probs=62.3
Q ss_pred cEEEEEe-CChhhHHHHHHHhh---CCCEEEEECCCCC-CCC----ccccCCceec----CCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVG-RSASARALATRSLS---FKMSVLYFDVPEG-KGK----VTFPSAARRM----DTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lka---fG~~V~~~dr~~~-~~~----~~~~~g~~~~----~sL~eLL~~sDvVil~lPlT 229 (620)
++|+||| .|.+|..+|..|.. +..++..+|.... ... ...+...... .+..+.+.+||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4799999 99999999999864 5569999998751 111 0111111111 25667889999999987542
Q ss_pred h---h--------hHhhcC--HHHhhccCCCcEEEEcCCChhhcHHHH
Q 007040 230 D---E--------TIQIIN--AECLQHIKPGAFLVNTGSSQLLDDCAV 264 (620)
Q Consensus 230 ~---~--------T~~lI~--~~~L~~MK~gAiLINvgRG~vVDe~AL 264 (620)
. . +..++- .+.+....|++++++++- .+|.-..
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN--Pvd~~t~ 126 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN--PVNTTVA 126 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS--CHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC--cchhHHH
Confidence 1 1 222221 123344568999999964 4554443
No 414
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.01 E-value=0.063 Score=51.93 Aligned_cols=37 Identities=16% Similarity=0.106 Sum_probs=32.3
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGK 197 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~ 197 (620)
.|+++.|.| .|.||+++|+.|...|++|++.+++...
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 39 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 39 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 477888887 5899999999999999999999988654
No 415
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=93.98 E-value=0.024 Score=60.30 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=49.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhC--CCEEE-EECCCCCCCCc-cccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSF--KMSVL-YFDVPEGKGKV-TFPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~Lkaf--G~~V~-~~dr~~~~~~~-~~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
-.+|||||+| +|+.-++.++.. ++++. ++|++...... +...++..+.++++++.+.|+|++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 3579999999 799888877765 67766 56887643321 12235666789999999999999999965
No 416
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.95 E-value=0.059 Score=53.61 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=45.4
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCC--C-c-----c-ccCCce-------ecCCHHhhhcCCcEEEE
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKG--K-V-----T-FPSAAR-------RMDTLNDLLAASDVISL 224 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~--~-~-----~-~~~g~~-------~~~sL~eLL~~sDvVil 224 (620)
.++|.|+|. |.||+.+++.|...|++|++.+|..... . . . ...++. ..+++.+++..+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 467999995 9999999999999999999999875321 0 0 0 011111 12345666777888877
Q ss_pred ccc
Q 007040 225 HCA 227 (620)
Q Consensus 225 ~lP 227 (620)
+.+
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 765
No 417
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.92 E-value=0.07 Score=55.96 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=63.7
Q ss_pred cEEEEEeCChhhHHHHHHHhhC---------CCEEE-EECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhh
Q 007040 163 LVLGIVGRSASARALATRSLSF---------KMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDET 232 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf---------G~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T 232 (620)
.+|||||+|.||+.+++.+... +++|. ++|++..... .+.. .....++++++ +.|+|+.++|.....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~-~~~~-~~~~~d~~~ll-~iDvVve~t~~~~~a 80 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR-AIPQ-ELLRAEPFDLL-EADLVVEAMGGVEAP 80 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC-SSCG-GGEESSCCCCT-TCSEEEECCCCSHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh-ccCc-ccccCCHHHHh-CCCEEEECCCCcHHH
Confidence 4699999999999999998765 46664 5576653322 2221 23456888888 999999999865321
Q ss_pred HhhcCHHHhhccCCCcEEEEcCCChh-hcHHHHHHHHHcC
Q 007040 233 IQIINAECLQHIKPGAFLVNTGSSQL-LDDCAVKQLLIDG 271 (620)
Q Consensus 233 ~~lI~~~~L~~MK~gAiLINvgRG~v-VDe~AL~~AL~~G 271 (620)
..+ ....|+.|.-+|...=..+ ...++|.++.++.
T Consensus 81 ~~~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 81 LRL----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp HHH----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred HHH----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 112 2234555656665432223 2445677666665
No 418
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.91 E-value=0.03 Score=57.84 Aligned_cols=88 Identities=9% Similarity=0.060 Sum_probs=54.7
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---c-CCHHh----hhc--CCcEEEEcccCC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---M-DTLND----LLA--ASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~-~sL~e----LL~--~sDvVil~lPlT 229 (620)
.|.+|.|+|. |.||..+++.++.+|++|++.+++....+.....+... . .++.+ +.. ..|+|+.++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5889999998 99999999999999999999998764433111111111 0 12221 111 367777666532
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
.-...+..|+++..+|.+|
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1234566677777777765
No 419
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=93.91 E-value=0.094 Score=49.12 Aligned_cols=68 Identities=13% Similarity=-0.099 Sum_probs=46.5
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCC--EEEEECCCCCCCCcc---ccCCceecCCHHhhhcCCcEEEEcccCCh
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKM--SVLYFDVPEGKGKVT---FPSAARRMDTLNDLLAASDVISLHCAVTD 230 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~--~V~~~dr~~~~~~~~---~~~g~~~~~sL~eLL~~sDvVil~lPlT~ 230 (620)
.+++|.|.| .|.||+.+++.|...|. +|++.+|+....... ........+++.+++ +|+|+.+.....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 467899998 89999999999999998 999999876541100 000011112333444 899999887654
No 420
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.90 E-value=0.06 Score=54.95 Aligned_cols=71 Identities=20% Similarity=0.121 Sum_probs=49.8
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----------cCCc-------eecCCHHhhhcCC
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF-----------PSAA-------RRMDTLNDLLAAS 219 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----------~~g~-------~~~~sL~eLL~~s 219 (620)
.+.+++|.|.|. |.||+.+++.|...|++|+++++......... ..++ ....++.+++..+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 367889999987 99999999999999999999998653211000 0111 1122456778888
Q ss_pred cEEEEcccCC
Q 007040 220 DVISLHCAVT 229 (620)
Q Consensus 220 DvVil~lPlT 229 (620)
|+|+.+....
T Consensus 104 d~vih~A~~~ 113 (352)
T 1sb8_A 104 DYVLHQAALG 113 (352)
T ss_dssp SEEEECCSCC
T ss_pred CEEEECCccc
Confidence 9988877643
No 421
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.88 E-value=0.026 Score=57.76 Aligned_cols=35 Identities=9% Similarity=-0.051 Sum_probs=32.5
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.|+++.|+|. |.||..+++.++..|++|++.+++.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5889999998 9999999999999999999999865
No 422
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.83 E-value=0.031 Score=57.45 Aligned_cols=89 Identities=11% Similarity=0.129 Sum_probs=55.3
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee---c--CCHHhhh----cCCcEEEEcccCChh
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR---M--DTLNDLL----AASDVISLHCAVTDE 231 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~---~--~sL~eLL----~~sDvVil~lPlT~~ 231 (620)
.|.+|.|+|.|.||...++.++.+|++|++.+++....+.....|... . .++.+.+ ...|+|+.++...+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 588999999999999999999999999999998764333111122111 0 1222222 245777666542211
Q ss_pred hHhhcCHHHhhccCCCcEEEEcC
Q 007040 232 TIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 232 T~~lI~~~~L~~MK~gAiLINvg 254 (620)
-...+..++++..+|.+|
T Consensus 246 -----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECS
T ss_pred -----HHHHHHHhccCCEEEEeC
Confidence 123456666777777665
No 423
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.83 E-value=0.031 Score=59.72 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=30.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhCC---CEEEEECCCCC
Q 007040 163 LVLGIVGRSASARALATRSLSFK---MSVLYFDVPEG 196 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG---~~V~~~dr~~~ 196 (620)
++|+|||.|.||+.+|+.|...| ..|.+++++..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~ 38 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLS 38 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHH
Confidence 47999999999999999999888 49999998764
No 424
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=93.82 E-value=0.55 Score=49.74 Aligned_cols=96 Identities=9% Similarity=0.079 Sum_probs=67.2
Q ss_pred eecCcEEEEEeCC--hhhHHHHHHHhhCCCEEEEECCCCCCCCcc-----------ccCCceecCCHHhhhcCCcEEEEc
Q 007040 159 RCRGLVLGIVGRS--ASARALATRSLSFKMSVLYFDVPEGKGKVT-----------FPSAARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 159 ~L~GktVGIIGlG--~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-----------~~~g~~~~~sL~eLL~~sDvVil~ 225 (620)
.+.|.+|+|||=+ ++..+.+..+..||++|.++.|..-..... ....+....++++.+..+|||..-
T Consensus 178 ~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~ 257 (358)
T 4h31_A 178 ALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTD 257 (358)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEE
Confidence 4789999999954 799999999999999999999864222110 011234567899999999999853
Q ss_pred ccC----Chhh---------HhhcCHHHhhc-cCCCcEEEEcC
Q 007040 226 CAV----TDET---------IQIINAECLQH-IKPGAFLVNTG 254 (620)
Q Consensus 226 lPl----T~~T---------~~lI~~~~L~~-MK~gAiLINvg 254 (620)
.=. .++. ..-|+.+.++. .||+++|.-+.
T Consensus 258 ~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 258 VWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 221 1111 11367888876 47888888764
No 425
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.82 E-value=0.025 Score=58.33 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=33.4
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhC--CCEEEEECCCCCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSF--KMSVLYFDVPEGK 197 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~Lkaf--G~~V~~~dr~~~~ 197 (620)
.|.+|.|+|.|.||...++.++.+ |++|++.+++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~ 208 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKH 208 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHH
Confidence 588999999999999999999999 9999999987543
No 426
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=93.82 E-value=0.059 Score=55.60 Aligned_cols=34 Identities=15% Similarity=-0.046 Sum_probs=30.8
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
++|.|.|. |.||+.+++.|...|++|+++++...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999986 99999999999999999999998764
No 427
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.80 E-value=0.065 Score=52.89 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=33.4
Q ss_pred eecCcEEEEEeC---ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVGR---SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIGl---G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.+.|+++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 368899999997 6999999999999999999999875
No 428
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=93.79 E-value=0.067 Score=54.44 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=45.5
Q ss_pred CcEEEEEeC-ChhhHHHHHHHh-hCCCEEE-EECCCCCC--CCc---c---ccCCceecCCHHhhhcCCcEEEEcc
Q 007040 162 GLVLGIVGR-SASARALATRSL-SFKMSVL-YFDVPEGK--GKV---T---FPSAARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~Lk-afG~~V~-~~dr~~~~--~~~---~---~~~g~~~~~sL~eLL~~sDvVil~l 226 (620)
.++|+|+|+ |.||+.+++.+. .-|++|. ++|+.... ... . ...++...+++++++..+|+|+-+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 358999998 999999999876 5588877 77776532 110 0 0113334567889998999999555
No 429
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.75 E-value=0.078 Score=52.83 Aligned_cols=68 Identities=21% Similarity=0.122 Sum_probs=47.6
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCc--------cccCCc-------eecCCHHhhhcCCcEEEEc
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKV--------TFPSAA-------RRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~--------~~~~g~-------~~~~sL~eLL~~sDvVil~ 225 (620)
.++|.|+| .|.||+.+++.|...|++|++.+|+...... ....++ ...+++.+++..+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46799998 5999999999999999999999987532100 001111 1223466778888988887
Q ss_pred ccCC
Q 007040 226 CAVT 229 (620)
Q Consensus 226 lPlT 229 (620)
.+..
T Consensus 84 a~~~ 87 (313)
T 1qyd_A 84 LAGG 87 (313)
T ss_dssp CCCS
T ss_pred Cccc
Confidence 7644
No 430
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.73 E-value=0.17 Score=53.59 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=61.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCC-CEEEEECCCCCCCCcc------ccCCce-ecCCHHhhhcCCcEEEEcccCChhhH
Q 007040 163 LVLGIVG-RSASARALATRSLSFK-MSVLYFDVPEGKGKVT------FPSAAR-RMDTLNDLLAASDVISLHCAVTDETI 233 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~------~~~g~~-~~~sL~eLL~~sDvVil~lPlT~~T~ 233 (620)
.+||||| .|.+|+++.++|..+- +++..+......+... +..... ...+.++++.++|+|++|+|....
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~s-- 91 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGAS-- 91 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHH--
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHHH--
Confidence 4699996 7999999999998764 4777665433232210 101111 112455666889999999996532
Q ss_pred hhcCHHHhhccCCCcEEEEcCCChhhcHHHHHH
Q 007040 234 QIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQ 266 (620)
Q Consensus 234 ~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~ 266 (620)
.+....+ .|+.+|+.+..-=.+..+.++
T Consensus 92 ----~~~~~~~-~g~~VIDlSsdfRl~~~~~y~ 119 (351)
T 1vkn_A 92 ----YDLVREL-KGVKIIDLGADFRFDDPGVYR 119 (351)
T ss_dssp ----HHHHTTC-CSCEEEESSSTTTCSSHHHHH
T ss_pred ----HHHHHHh-CCCEEEECChhhhCCchhhhh
Confidence 3334444 799999998654445444443
No 431
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.72 E-value=0.085 Score=53.30 Aligned_cols=39 Identities=13% Similarity=0.003 Sum_probs=33.9
Q ss_pred ceeecCcEEEEEeCC-h--hhHHHHHHHhhCCCEEEEECCCC
Q 007040 157 MRRCRGLVLGIVGRS-A--SARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 157 ~~~L~GktVGIIGlG-~--IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
+..+.|+++.|.|.+ . ||+++|+.|...|++|++.+++.
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 346899999999974 4 99999999999999999998874
No 432
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.71 E-value=0.064 Score=53.44 Aligned_cols=66 Identities=12% Similarity=-0.018 Sum_probs=47.7
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCC-CEEEEECCCCCCCC--ccccCCc-------eecCCHHhhhcCCcEEEEccc
Q 007040 162 GLVLGIVGR-SASARALATRSLSFK-MSVLYFDVPEGKGK--VTFPSAA-------RRMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG-~~V~~~dr~~~~~~--~~~~~g~-------~~~~sL~eLL~~sDvVil~lP 227 (620)
.++|.|.|. |.||+.+++.|...| ++|++.+|++.... .....++ ...+++.+++..+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999987 999999999999888 99999998764321 0001111 122356678889999998775
No 433
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.71 E-value=0.11 Score=56.62 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=69.1
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEE-EECCCCC-------CCC------------ccccCCceecCCHHhhhc-
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVL-YFDVPEG-------KGK------------VTFPSAARRMDTLNDLLA- 217 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~-~~dr~~~-------~~~------------~~~~~g~~~~~sL~eLL~- 217 (620)
++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+.. ... ..++ +... .+.++++.
T Consensus 232 ~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~-~a~~-i~~~ei~~~ 309 (440)
T 3aog_A 232 QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYP-KAEP-LPAADFWGL 309 (440)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCT-TSEE-CCHHHHTTC
T ss_pred CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCC-CceE-cCchhhhcC
Confidence 6889999999999999999999999999998 4454310 000 0011 1122 24456553
Q ss_pred CCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 218 ASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 218 ~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
.|||++-|.. .+.|+.+....++ ..+++-.+-+++- .+| .+.|.+..|.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 6999998765 3466666666674 6688888888864 333 3455554443
No 434
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.67 E-value=0.15 Score=51.67 Aligned_cols=72 Identities=14% Similarity=-0.028 Sum_probs=46.4
Q ss_pred eeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-----cCCc--eecCCHHhhhcCCcEEEEcccCC
Q 007040 158 RRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF-----PSAA--RRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 158 ~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-----~~g~--~~~~sL~eLL~~sDvVil~lPlT 229 (620)
..+.+++|.|.|. |.||+.+++.|...|++|+++++......... ...+ ...+-.+..+..+|+|+.+....
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPA 102 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcccc
Confidence 3467899999987 99999999999999999999998643211110 0111 12222334566789888776543
No 435
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.67 E-value=0.068 Score=53.09 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=32.9
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
++.|+++.|.|. |.||+++|+.|...|++|++.+++.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE 40 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 367899999975 7899999999999999999999875
No 436
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.65 E-value=0.14 Score=51.56 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=47.9
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-------cCC-------ceecCCHHhhhc--CCcEEE
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTF-------PSA-------ARRMDTLNDLLA--ASDVIS 223 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-------~~g-------~~~~~sL~eLL~--~sDvVi 223 (620)
.+++|.|.| .|.||+.+++.|...|++|++.++......... ... ....+++.+++. ..|+|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 467899998 699999999999999999999998764432110 001 112234556666 789888
Q ss_pred EcccCC
Q 007040 224 LHCAVT 229 (620)
Q Consensus 224 l~lPlT 229 (620)
.+....
T Consensus 84 h~A~~~ 89 (341)
T 3enk_A 84 HFAALK 89 (341)
T ss_dssp ECCCCC
T ss_pred ECcccc
Confidence 776543
No 437
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=93.65 E-value=0.18 Score=50.33 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=47.1
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhc--CCcEEEEcccCC
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLA--ASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~--~sDvVil~lPlT 229 (620)
+++|.|.| .|.||+.+++.|...|++|+++++.... + ....+++.+++. .+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-D------~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-N------LLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTC-C------TTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccC-C------ccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 57899998 5999999999999999999999876421 1 112245777787 899999887654
No 438
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=93.60 E-value=0.14 Score=50.53 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=45.3
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
++|.|.|. |.||+.+++.|. .|++|+++++...... ......+.+.+++.. +|+|+.+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~----~D~~d~~~~~~~~~~~~~d~vih~a~~~ 65 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFC----GDFSNPKGVAETVRKLRPDVIVNAAAHT 65 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSC----CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccccccc----ccCCCHHHHHHHHHhcCCCEEEECcccC
Confidence 46889986 999999999999 7999999998762211 111223456677776 99999877643
No 439
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=93.59 E-value=0.085 Score=54.61 Aligned_cols=71 Identities=18% Similarity=0.118 Sum_probs=51.3
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCC-CEEEEECCCCCCCCccc--cCCce-------ecCCHHhhhcCCcEEEEccc
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFK-MSVLYFDVPEGKGKVTF--PSAAR-------RMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG-~~V~~~dr~~~~~~~~~--~~g~~-------~~~sL~eLL~~sDvVil~lP 227 (620)
.+.+++|.|.|. |.||+.+++.|...| ++|+++++......... ..++. ..+.+.+++..+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 478899999995 999999999999999 99999998764321111 11111 12235667788999998876
Q ss_pred CC
Q 007040 228 VT 229 (620)
Q Consensus 228 lT 229 (620)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 440
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=93.57 E-value=0.1 Score=50.65 Aligned_cols=38 Identities=18% Similarity=0.055 Sum_probs=32.7
Q ss_pred ecCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCC
Q 007040 160 CRGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGK 197 (620)
Q Consensus 160 L~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~ 197 (620)
..|+++.|.| .|.||+++|+.|...|++|++.+++...
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 43 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE 43 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence 4688898887 5799999999999999999999988644
No 441
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.55 E-value=0.085 Score=55.47 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=56.8
Q ss_pred cEEEEEe-CChhhHHHHHHHhh-CCCEEEEECCCC---CCCCcc---cc--CC---ceecC--CHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVG-RSASARALATRSLS-FKMSVLYFDVPE---GKGKVT---FP--SA---ARRMD--TLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lka-fG~~V~~~dr~~---~~~~~~---~~--~g---~~~~~--sL~eLL~~sDvVil~lP 227 (620)
.+|+|+| .|.+|+.+.+.|.. -.+++..+..+. ..+... ++ .+ ....+ +.++++..+|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5799999 69999999999987 456777664333 222210 00 11 11111 45556589999999999
Q ss_pred CChhhHhhcCHHHhhccCCCcEEEEcCCChhh
Q 007040 228 VTDETIQIINAECLQHIKPGAFLVNTGSSQLL 259 (620)
Q Consensus 228 lT~~T~~lI~~~~L~~MK~gAiLINvgRG~vV 259 (620)
... +..+. . ..++.|+.+|+.+..-=.
T Consensus 85 ~~~-s~~~~-~---~~~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 85 HEV-SHDLA-P---QFLEAGCVVFDLSGAFRV 111 (337)
T ss_dssp HHH-HHHHH-H---HHHHTTCEEEECSSTTSS
T ss_pred hHH-HHHHH-H---HHHHCCCEEEEcCCcccc
Confidence 432 12221 1 224679999999865433
No 442
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.55 E-value=0.12 Score=56.54 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=69.3
Q ss_pred eecCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCC-cccc----------CCceecCCHHhhhc
Q 007040 159 RCRGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGK-VTFP----------SAARRMDTLNDLLA 217 (620)
Q Consensus 159 ~L~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~-~~~~----------~g~~~~~sL~eLL~ 217 (620)
.+.|++|+|+|+- .-...|++.|...|++|.+|||...... ..+. .......++.+.+.
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAAR 404 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHh
Confidence 4789999999974 4578899999999999999999863211 1111 02345567889999
Q ss_pred CCcEEEEcccCChhhHhhcCHHHh-hccCCCcEEEEcCCChhhcHHH
Q 007040 218 ASDVISLHCAVTDETIQIINAECL-QHIKPGAFLVNTGSSQLLDDCA 263 (620)
Q Consensus 218 ~sDvVil~lPlT~~T~~lI~~~~L-~~MK~gAiLINvgRG~vVDe~A 263 (620)
.+|+|+++.... +-+ -++-+.+ ..|+ +.++||+ |+ +.|.+.
T Consensus 405 ~ad~~vi~t~~~-~f~-~~~~~~~~~~~~-~~~i~D~-r~-~~~~~~ 446 (478)
T 2y0c_A 405 DADALVIVTEWK-IFK-SPDFVALGRLWK-TPVIFDG-RN-LYEPET 446 (478)
T ss_dssp TCSEEEECSCCG-GGG-SCCHHHHHTTCS-SCEEEES-SC-CSCHHH
T ss_pred CCCEEEEecCCh-Hhh-ccCHHHHHhhcC-CCEEEEC-CC-CCCHHH
Confidence 999999999875 222 3344444 4565 4788886 44 345443
No 443
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=93.54 E-value=0.22 Score=52.81 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=63.0
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccc---------cCC--ceecCCHHhhhcCCcEEEEcc
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTF---------PSA--ARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~---------~~g--~~~~~sL~eLL~~sDvVil~l 226 (620)
.+.|.+|+|||= +++..+++..+..||++|.+..|..-.....+ ..| +....+++ .++.+|||..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 378999999986 67888999999999999999998653322111 112 34567899 999999999632
Q ss_pred --cCC------hh----hH--hhcCHHHhhccCCCcEEEEc
Q 007040 227 --AVT------DE----TI--QIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 227 --PlT------~~----T~--~lI~~~~L~~MK~gAiLINv 253 (620)
... .+ .. --|+.+.++.+|++++|.-+
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHc 269 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHC 269 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEEC
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECC
Confidence 100 11 00 22466666666666666654
No 444
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=93.52 E-value=0.067 Score=51.38 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=59.6
Q ss_pred eecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhh---cCCcEEEEcccCC-h---
Q 007040 159 RCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLL---AASDVISLHCAVT-D--- 230 (620)
Q Consensus 159 ~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL---~~sDvVil~lPlT-~--- 230 (620)
.+.|+++.|.|. |.||+++|+.|...|++|++.+++..- + . ...+++++++ ...|+|+.+.-.. +
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-D--~----~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~ 75 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL-D--I----SDEKSVYHYFETIGAFDHLIVTAGSYAPAGK 75 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTC-C--T----TCHHHHHHHHHHHCSEEEEEECCCCCCCCSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCccc-C--C----CCHHHHHHHHHHhCCCCEEEECCCCCCCCCC
Confidence 467899999975 789999999999999999999987641 1 1 1112334443 4679998876533 1
Q ss_pred ------h-hH-----h-----hcCHHHhhccCCCcEEEEcCCC
Q 007040 231 ------E-TI-----Q-----IINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 231 ------~-T~-----~-----lI~~~~L~~MK~gAiLINvgRG 256 (620)
+ -. + .+....+..|+++..+||++..
T Consensus 76 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 76 VVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred cccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 1 00 0 1123455677777888888764
No 445
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.52 E-value=0.11 Score=54.34 Aligned_cols=68 Identities=12% Similarity=-0.009 Sum_probs=47.3
Q ss_pred cEEEEEe-CChhhHH-HH----HHHhhCC-CEE----------EEECCCCCCCCcc-ccCCc-eecCCHHhhhcC--CcE
Q 007040 163 LVLGIVG-RSASARA-LA----TRSLSFK-MSV----------LYFDVPEGKGKVT-FPSAA-RRMDTLNDLLAA--SDV 221 (620)
Q Consensus 163 ktVGIIG-lG~IG~~-vA----~~LkafG-~~V----------~~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~~--sDv 221 (620)
.+||||| +|.||+. .+ ..++..+ ..+ .++|++....... ...++ ..+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6666443 332 4888887543311 11234 356799999976 899
Q ss_pred EEEcccCCh
Q 007040 222 ISLHCAVTD 230 (620)
Q Consensus 222 Vil~lPlT~ 230 (620)
|++++|...
T Consensus 87 V~i~tp~~~ 95 (383)
T 3oqb_A 87 FFDAATTQA 95 (383)
T ss_dssp EEECSCSSS
T ss_pred EEECCCchH
Confidence 999999653
No 446
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.52 E-value=0.068 Score=56.00 Aligned_cols=67 Identities=15% Similarity=0.143 Sum_probs=43.8
Q ss_pred cEEEEEeCChhhHHHHHHHhh-CCCEEEEE-CCCCCCCCccc-----------c--------CCceecCCHHhhhcCCcE
Q 007040 163 LVLGIVGRSASARALATRSLS-FKMSVLYF-DVPEGKGKVTF-----------P--------SAARRMDTLNDLLAASDV 221 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka-fG~~V~~~-dr~~~~~~~~~-----------~--------~g~~~~~sL~eLL~~sDv 221 (620)
.+|||+|+|.||+.+++.|.. -+++|.+. |+.+....... . .+.....++++++..+|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 369999999999999999986 57887665 44321100000 0 001111256777789999
Q ss_pred EEEcccCC
Q 007040 222 ISLHCAVT 229 (620)
Q Consensus 222 Vil~lPlT 229 (620)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999965
No 447
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.49 E-value=0.15 Score=52.53 Aligned_cols=88 Identities=11% Similarity=0.040 Sum_probs=57.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhh-CCCEEEE-ECCCCCC--CC--cc----ccCCceecCCHHhhhcCCcEEEEcccCChh
Q 007040 163 LVLGIVG-RSASARALATRSLS-FKMSVLY-FDVPEGK--GK--VT----FPSAARRMDTLNDLLAASDVISLHCAVTDE 231 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lka-fG~~V~~-~dr~~~~--~~--~~----~~~g~~~~~sL~eLL~~sDvVil~lPlT~~ 231 (620)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+.... .. .. ...++....++++++..+|+|+-..+ |+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 4799999 99999999999874 5888664 4775422 11 00 12355566899999999999997764 22
Q ss_pred -hHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 232 -TIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 232 -T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
+... ....++.|.-+|-...|
T Consensus 100 a~~~~----~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 ASVLY----ANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HHHHH----HHHHHHHTCEEEECCCC
T ss_pred HHHHH----HHHHHHcCCCEEEECCC
Confidence 2211 22234456666655555
No 448
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.46 E-value=0.055 Score=58.97 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=66.2
Q ss_pred cEEEEEeCChhhHHHHHHHhh----------CCCEEE-EECCCCCCCCccccCCceecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLS----------FKMSVL-YFDVPEGKGKVTFPSAARRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka----------fG~~V~-~~dr~~~~~~~~~~~g~~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.+|||||+|.||+.+++.+.. .+++|. ++|++...... +..+.....++++++.+ .|+|+.++|..
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~-~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEA-LAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHH-HHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhh-hcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 579999999999999987753 466665 45665432221 11233456789999974 79999999963
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCChhh-cHHHHHHHHHcCCcc
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSSQLL-DDCAVKQLLIDGTLA 274 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG~vV-De~AL~~AL~~G~I~ 274 (620)
..-..+ ....|+.|.-+|..-=+.+. ...+|.++.++..+.
T Consensus 90 ~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 222222 23556666666654332222 235677777765543
No 449
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=93.43 E-value=0.033 Score=54.75 Aligned_cols=65 Identities=9% Similarity=0.090 Sum_probs=44.7
Q ss_pred EEEEEeC-ChhhHHHHHHHhhC--CCEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccC
Q 007040 164 VLGIVGR-SASARALATRSLSF--KMSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 164 tVGIIGl-G~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPl 228 (620)
+|.|.|. |.||+.+++.|... |++|++.+++..........++ ...+++.+++..+|+|+.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 3678886 99999999999988 9999999987643221001111 1223466788899999977653
No 450
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.43 E-value=0.055 Score=53.47 Aligned_cols=68 Identities=13% Similarity=0.074 Sum_probs=49.0
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCcc----ccCCceecCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVT----FPSAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~----~~~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
.+++|.|.| .|.||+.+++.|...|++|++.+++....... ........+++.+++...|+|+.+...
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 367899998 79999999999999999999999886443200 001111233466788899999987643
No 451
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.41 E-value=0.039 Score=56.11 Aligned_cols=87 Identities=11% Similarity=0.014 Sum_probs=56.6
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceec-CCHHhhhcCCcEEEEcccCChhhHhhcCHH
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRM-DTLNDLLAASDVISLHCAVTDETIQIINAE 239 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~-~sL~eLL~~sDvVil~lPlT~~T~~lI~~~ 239 (620)
.|.+|.|+|.|.+|...++.++.+|++|++.+ +....+.....|.... .+.+++-...|+|+-++... . + ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~-~----~-~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ-N----A-AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch-h----H-HH
Confidence 68899999999999999999999999999999 6544332222333211 12333334578888776532 1 1 23
Q ss_pred HhhccCCCcEEEEcC
Q 007040 240 CLQHIKPGAFLVNTG 254 (620)
Q Consensus 240 ~L~~MK~gAiLINvg 254 (620)
.+..++++..+|.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 567788888888874
No 452
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=93.40 E-value=0.082 Score=52.82 Aligned_cols=66 Identities=11% Similarity=0.032 Sum_probs=40.6
Q ss_pred CcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcC--CcEEEEcccC
Q 007040 162 GLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAA--SDVISLHCAV 228 (620)
Q Consensus 162 GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~--sDvVil~lPl 228 (620)
+++|.|.|. |.||+.+++.|...|++|++.+++..... ...........+.+++.. .|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 578999986 99999999999999999999997653211 111111223456677764 8999887754
No 453
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=93.38 E-value=0.14 Score=51.57 Aligned_cols=37 Identities=22% Similarity=0.085 Sum_probs=33.3
Q ss_pred eeecCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCC
Q 007040 158 RRCRGLVLGIVGR-SASARALATRSLSFKMSVLYFDVP 194 (620)
Q Consensus 158 ~~L~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~ 194 (620)
.++.|+++.|.|. |.||+++|+.|...|++|++.++.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999975 789999999999999999999876
No 454
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.38 E-value=0.078 Score=55.81 Aligned_cols=87 Identities=11% Similarity=-0.000 Sum_probs=50.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEEEEC-CCCCCCC--------c------------ccc-CCceecCCHHhhhcCC
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVLYFD-VPEGKGK--------V------------TFP-SAARRMDTLNDLLAAS 219 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~d-r~~~~~~--------~------------~~~-~g~~~~~sL~eLL~~s 219 (620)
.+|||+|+|+||+.+++.|... +++|.+++ ..+.... . .+. ..........+++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3799999999999999999866 68877664 2211000 0 000 0011112355666789
Q ss_pred cEEEEcccCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 220 DVISLHCAVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 220 DvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
|+|+.|+|..-... .. + -.+++.|+.+|..
T Consensus 83 DiV~eatg~~~s~~-~a--~-~~~l~aG~~VI~s 112 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQ-NL--E-NIYKPHKVKAILQ 112 (343)
T ss_dssp SEEEECCCTTHHHH-HH--H-HTTTTTTCEEEEC
T ss_pred CEEEECCCccccHH-HH--H-HHHHHCCCEEEEC
Confidence 99999998653111 11 0 2456667666653
No 455
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.38 E-value=0.14 Score=52.61 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=56.5
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCC--EEEEECC--CCCCCC---cccc------CCceecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVG-RSASARALATRSLSFKM--SVLYFDV--PEGKGK---VTFP------SAARRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~--~V~~~dr--~~~~~~---~~~~------~g~~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|+|+| .|.+|..++..|...|. ++..+|+ ...... .... .......+..+.++.||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4799999 99999999999987665 7888998 432111 0000 0111111225678999999999864
Q ss_pred Chh---hHh-h--cC-------HHHhhccCCCcEEEEcCCC
Q 007040 229 TDE---TIQ-I--IN-------AECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~~---T~~-l--I~-------~~~L~~MK~gAiLINvgRG 256 (620)
... ++. + .| .+.+....|++++++++-.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 321 110 0 01 1223344778899987543
No 456
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=93.37 E-value=0.13 Score=51.85 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=45.4
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCC--CEEEEECCCCCCCC-cc---c--cCCce-------ecCCHHhhhcCCcEEEEc
Q 007040 162 GLVLGIVG-RSASARALATRSLSFK--MSVLYFDVPEGKGK-VT---F--PSAAR-------RMDTLNDLLAASDVISLH 225 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG--~~V~~~dr~~~~~~-~~---~--~~g~~-------~~~sL~eLL~~sDvVil~ 225 (620)
+++|.|.| .|.||+.+++.|...| ++|++.++...... .. . ..++. ....+.+++..+|+|+.+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 57899998 6999999999999876 89999988642111 00 0 00111 112355667788999887
Q ss_pred ccCC
Q 007040 226 CAVT 229 (620)
Q Consensus 226 lPlT 229 (620)
....
T Consensus 83 A~~~ 86 (336)
T 2hun_A 83 AAES 86 (336)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7654
No 457
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.37 E-value=0.042 Score=57.52 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=56.8
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee-----cCCHHhhhc--------CCcEEEEcc
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR-----MDTLNDLLA--------ASDVISLHC 226 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~-----~~sL~eLL~--------~sDvVil~l 226 (620)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+.....|... ..++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 58899999999999999999999999 9999988764332111122211 122323222 367777766
Q ss_pred cCChhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 227 AVTDETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 227 PlT~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
... .+ -...+..++++..+|.+|-
T Consensus 262 G~~-~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVA-ET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCH-HH----HHHHHHHEEEEEEEEECSC
T ss_pred CCH-HH----HHHHHHHhccCCEEEEEec
Confidence 522 11 1234566777777777653
No 458
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.36 E-value=0.037 Score=54.47 Aligned_cols=66 Identities=8% Similarity=0.076 Sum_probs=46.5
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhC--CCEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVGR-SASARALATRSLSF--KMSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|.|.|. |.||+.+++.|... |++|++++++..........++ ...+++.+++..+|+|+.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 45788886 99999999999988 9999999987643221001111 1223466788899999877654
No 459
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.36 E-value=0.2 Score=54.18 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=66.7
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhh-CCCEEE-EECCCCC-------CCC------------ccccCCceecCCHHhhh-
Q 007040 159 RCRGLVLGIVGRSASARALATRSLS-FKMSVL-YFDVPEG-------KGK------------VTFPSAARRMDTLNDLL- 216 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~Lka-fG~~V~-~~dr~~~-------~~~------------~~~~~g~~~~~sL~eLL- 216 (620)
++.|++|.|.|+|++|+.+|+.|.. .|++|+ +.|.+.. ... ..++ +.... +.++++
T Consensus 206 ~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~-~a~~~-~~~eil~ 283 (415)
T 2tmg_A 206 DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYP-KGERI-TNEELLE 283 (415)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCS-SSEEE-CHHHHTT
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCC-CceEc-Cchhhhc
Confidence 5899999999999999999999998 999998 4444310 000 0010 11122 345554
Q ss_pred cCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 217 AASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 217 ~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
..||+++-|... +.|+.+....++ ..+++-.+-+++- .++ .+.|.+..|.
T Consensus 284 ~~~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPTT-PEA-DEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CCCcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCcccC-HHH-HHHHHHCCCE
Confidence 368888877653 366777666673 5677777777753 333 3445555443
No 460
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.33 E-value=0.1 Score=57.56 Aligned_cols=87 Identities=15% Similarity=0.067 Sum_probs=61.4
Q ss_pred cEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCC----ceecCCHHhh-hcCCcEEEEcccCChhhHhhcC
Q 007040 163 LVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSA----ARRMDTLNDL-LAASDVISLHCAVTDETIQIIN 237 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g----~~~~~sL~eL-L~~sDvVil~lPlT~~T~~lI~ 237 (620)
+++.|+|+|.+|+.+|+.|...|++|++.|.++....... .. ....+.|.++ +.++|.|+++++.. ..+++-
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d--~~ni~~ 425 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGIDRASGIIVTTNDD--STNIFL 425 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTTSCSEEEECCSCH--HHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCccccCEEEEECCCc--hHHHHH
Confidence 7899999999999999999999999999998876544221 11 1112234444 78899999999865 344555
Q ss_pred HHHhhccCCCcEEEE
Q 007040 238 AECLQHIKPGAFLVN 252 (620)
Q Consensus 238 ~~~L~~MK~gAiLIN 252 (620)
.-..+.+.+...+|-
T Consensus 426 ~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 426 TLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHCSSSEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 556666777744443
No 461
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.32 E-value=0.17 Score=51.91 Aligned_cols=38 Identities=18% Similarity=0.082 Sum_probs=33.8
Q ss_pred eecCcEEEEEe-CChhhHHHHHHHhh--CCCEEEEECCCCC
Q 007040 159 RCRGLVLGIVG-RSASARALATRSLS--FKMSVLYFDVPEG 196 (620)
Q Consensus 159 ~L~GktVGIIG-lG~IG~~vA~~Lka--fG~~V~~~dr~~~ 196 (620)
.+.+++|.|.| .|-||+.+++.|.. .|++|+++++...
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 47899999995 69999999999999 9999999998654
No 462
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.30 E-value=0.039 Score=56.78 Aligned_cols=38 Identities=16% Similarity=0.075 Sum_probs=34.1
Q ss_pred cCcEEEEEeCC-hhhHHHHHHHhhCCCEEEEECCCCCCC
Q 007040 161 RGLVLGIVGRS-ASARALATRSLSFKMSVLYFDVPEGKG 198 (620)
Q Consensus 161 ~GktVGIIGlG-~IG~~vA~~LkafG~~V~~~dr~~~~~ 198 (620)
.|.+|.|+|.| .||..+++.++.+|++|++.+++....
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~ 182 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 58899999998 999999999999999999999876543
No 463
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=93.29 E-value=0.22 Score=52.13 Aligned_cols=66 Identities=12% Similarity=-0.019 Sum_probs=52.8
Q ss_pred ecCcEEEE-----EeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcc
Q 007040 160 CRGLVLGI-----VGRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 160 L~GktVGI-----IGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~l 226 (620)
+. .+|++ ||=+++..+++..+..||++|.+..|..-........++....+++++++.+|||..-.
T Consensus 167 l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~ 237 (324)
T 1js1_X 167 PK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKN 237 (324)
T ss_dssp CE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECC
T ss_pred ee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecC
Confidence 56 88999 99999999999999999999999998654333212124555689999999999999833
No 464
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.29 E-value=0.12 Score=54.21 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=26.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEEEECC
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVLYFDV 193 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~dr 193 (620)
.+|||+|+|+||+.+++.|... +++|.+.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEEC
Confidence 3799999999999999999875 678776653
No 465
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=93.29 E-value=0.12 Score=52.19 Aligned_cols=67 Identities=13% Similarity=0.103 Sum_probs=46.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhhC--CCEEEEECCCCCCCC----ccc-cCCce-------ecCCHHhhhcCCcEEEEccc
Q 007040 163 LVLGIVG-RSASARALATRSLSF--KMSVLYFDVPEGKGK----VTF-PSAAR-------RMDTLNDLLAASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lkaf--G~~V~~~dr~~~~~~----~~~-~~g~~-------~~~sL~eLL~~sDvVil~lP 227 (620)
++|.|.| .|.||+.+++.|... |++|+++++...... ... ..++. ....+.+++..+|+|+.+..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 5789998 699999999999987 899999998652111 000 01111 12245677888999988876
Q ss_pred CC
Q 007040 228 VT 229 (620)
Q Consensus 228 lT 229 (620)
..
T Consensus 85 ~~ 86 (348)
T 1oc2_A 85 ES 86 (348)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 466
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=93.26 E-value=0.074 Score=55.68 Aligned_cols=89 Identities=9% Similarity=0.079 Sum_probs=52.3
Q ss_pred cEEEEEe-CChhhHHHHHHHhhC---CCEEEEECCCCCCCCccccCCc-eecCCHH-hhhcCCcEEEEcccCChhhHhhc
Q 007040 163 LVLGIVG-RSASARALATRSLSF---KMSVLYFDVPEGKGKVTFPSAA-RRMDTLN-DLLAASDVISLHCAVTDETIQII 236 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~Lkaf---G~~V~~~dr~~~~~~~~~~~g~-~~~~sL~-eLL~~sDvVil~lPlT~~T~~lI 236 (620)
.+|||+| +|.||+.+.+.|... .++|..+.............+. ....+++ +.+..+|+|+.|+|... +....
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~-s~~~a 82 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGEL-SAKWA 82 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHH-HHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchH-HHHHH
Confidence 5799999 999999999999865 4577766532222110000111 1111121 24568999999999542 22221
Q ss_pred CHHHhhccCCCcEEEEcCCC
Q 007040 237 NAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 237 ~~~~L~~MK~gAiLINvgRG 256 (620)
. .+++.|+.+|+.+--
T Consensus 83 -~---~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 83 -P---IAAEAGVVVIDNTSH 98 (336)
T ss_dssp -H---HHHHTTCEEEECSST
T ss_pred -H---HHHHcCCEEEEcCCc
Confidence 1 224568889987643
No 467
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=93.26 E-value=0.083 Score=57.68 Aligned_cols=109 Identities=7% Similarity=0.084 Sum_probs=66.1
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCC--------CCCCCc----------------cc--cCCceecCC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVP--------EGKGKV----------------TF--PSAARRMDT 211 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~--------~~~~~~----------------~~--~~g~~~~~s 211 (620)
.++.|++|.|=|+|++|..+|+.|...|++|++.+-+ .-..+. .+ ..+....+
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~- 309 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE- 309 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE-
T ss_pred CCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec-
Confidence 3589999999999999999999999999999876532 111000 00 00111111
Q ss_pred HHhh-hcCCcEEEEcccCChhhHhhcCHHHhhccCCC--cEEEEcCCChhhcHHHHHHHHHcCCcc
Q 007040 212 LNDL-LAASDVISLHCAVTDETIQIINAECLQHIKPG--AFLVNTGSSQLLDDCAVKQLLIDGTLA 274 (620)
Q Consensus 212 L~eL-L~~sDvVil~lPlT~~T~~lI~~~~L~~MK~g--AiLINvgRG~vVDe~AL~~AL~~G~I~ 274 (620)
-+++ --.|||.+-|. +.+.|+.+....++.. .++++-+-+.+-.+. .+.|.+..|.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA--~~iL~~rGIl 368 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIEA--TELFQQAGVL 368 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHH--HHHHHHTTCE
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHHH--HHHHHHCCCE
Confidence 1112 23588877554 4457777777777543 567777777654332 2455555554
No 468
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.25 E-value=0.13 Score=53.72 Aligned_cols=110 Identities=15% Similarity=0.026 Sum_probs=66.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--------CCEEE-EECCCCCCCCccc----------cCCce-ecC---CHHhhh-cC
Q 007040 163 LVLGIVGRSASARALATRSLSF--------KMSVL-YFDVPEGKGKVTF----------PSAAR-RMD---TLNDLL-AA 218 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--------G~~V~-~~dr~~~~~~~~~----------~~g~~-~~~---sL~eLL-~~ 218 (620)
.+|||||+|.||+.+++.+... +++|. ++|++.......+ ..++. ... ++++++ ..
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4799999999999999998754 36664 5576653322101 01111 223 788887 35
Q ss_pred CcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCChhh-cHHHHHHHHHcCCc
Q 007040 219 SDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQLL-DDCAVKQLLIDGTL 273 (620)
Q Consensus 219 sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~vV-De~AL~~AL~~G~I 273 (620)
.|+|+.++|.. .|.+.--.-....|+.|.-+|...-..+. ..++|.++.++..+
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv 141 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNR 141 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCC
Confidence 79999999975 21111112234556677777765444442 33557766655443
No 469
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.25 E-value=0.098 Score=52.68 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=45.9
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccC
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPl 228 (620)
++|.|.| .|.||+.+++.|...|++|++++++..........++ ...+++.+++..+|+|+.+...
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 5899998 5999999999999999999999987654321111011 1123466778889999887764
No 470
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.24 E-value=0.15 Score=51.36 Aligned_cols=67 Identities=21% Similarity=0.193 Sum_probs=45.1
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCc-------------cccCCceecCCHHhhhcC--CcEEEEcc
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKV-------------TFPSAARRMDTLNDLLAA--SDVISLHC 226 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~-------------~~~~g~~~~~sL~eLL~~--sDvVil~l 226 (620)
++|.|.| .|.||+.+++.|...|++|+++++....... ..........++.+++.. .|+|+.+.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 4688998 6999999999999999999999875321110 000001112245667777 89998877
Q ss_pred cCC
Q 007040 227 AVT 229 (620)
Q Consensus 227 PlT 229 (620)
...
T Consensus 82 ~~~ 84 (347)
T 1orr_A 82 GQV 84 (347)
T ss_dssp CCC
T ss_pred ccc
Confidence 653
No 471
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.13 E-value=0.027 Score=58.16 Aligned_cols=68 Identities=10% Similarity=0.017 Sum_probs=46.6
Q ss_pred cEEEEEeCChhhHHHHHHHhhC--------CCEEE-EECCCCCCCCcc-ccCCc-eecCCHHhhhcC--CcEEEEcccCC
Q 007040 163 LVLGIVGRSASARALATRSLSF--------KMSVL-YFDVPEGKGKVT-FPSAA-RRMDTLNDLLAA--SDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf--------G~~V~-~~dr~~~~~~~~-~~~g~-~~~~sL~eLL~~--sDvVil~lPlT 229 (620)
.+|||||+|.||+.-++.++.. +++|. ++|+++...... ...++ ..+.+++++|++ .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999887776543 23544 668876433211 11232 356789999965 79999999965
Q ss_pred h
Q 007040 230 D 230 (620)
Q Consensus 230 ~ 230 (620)
-
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 3
No 472
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=93.05 E-value=0.24 Score=51.83 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=53.2
Q ss_pred cEEEEEeCChhhHHHHHHHhh-CCCEEEEECCC-CCCCC-----------cccc------------CCc----eecCCHH
Q 007040 163 LVLGIVGRSASARALATRSLS-FKMSVLYFDVP-EGKGK-----------VTFP------------SAA----RRMDTLN 213 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka-fG~~V~~~dr~-~~~~~-----------~~~~------------~g~----~~~~sL~ 213 (620)
.+|||+|+|+||+.+++.|.. -+++|.+.+.. ..... ..+. .+. ....+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 379999999999999999875 46887766531 11100 0010 000 0112566
Q ss_pred hh-h--cCCcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 214 DL-L--AASDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 214 eL-L--~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
++ + ..+|+|+.|+|..... +..-.+++.|+..|.++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~-----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTM-----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSH-----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhhH-----HHHHHHHhCCCeEEEeccC
Confidence 65 2 5789999999955221 1223456778666666554
No 473
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=92.98 E-value=0.12 Score=50.58 Aligned_cols=39 Identities=15% Similarity=0.029 Sum_probs=34.0
Q ss_pred eecCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCC
Q 007040 159 RCRGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGK 197 (620)
Q Consensus 159 ~L~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~ 197 (620)
.+.|+++.|.| .|.||+++|+.|...|++|++.+++...
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 51 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA 51 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 47889988887 5899999999999999999999987644
No 474
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=92.97 E-value=0.14 Score=52.71 Aligned_cols=34 Identities=21% Similarity=-0.016 Sum_probs=30.6
Q ss_pred cEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 163 LVLGIVG-RSASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 163 ktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
++|.|.| .|.||+.+++.|...|++|+++++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 59 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 59 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence 5799998 699999999999999999999998754
No 475
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.97 E-value=0.037 Score=57.65 Aligned_cols=37 Identities=11% Similarity=0.048 Sum_probs=33.0
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGK 197 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~ 197 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~ 227 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESR 227 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence 58899999999999999999999999 79999876533
No 476
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=92.96 E-value=0.26 Score=52.14 Aligned_cols=88 Identities=14% Similarity=0.188 Sum_probs=54.2
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEEEECC-CCCCC--------C---ccccC------------C--cee--cCCHH
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVLYFDV-PEGKG--------K---VTFPS------------A--ARR--MDTLN 213 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~~~dr-~~~~~--------~---~~~~~------------g--~~~--~~sL~ 213 (620)
.+|||+|+|.||+.+.+.|... .++|.+.+. ..... . ..+.. + ... ..+++
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 3899999999999999999876 788877763 32110 0 00000 0 001 11444
Q ss_pred hh-h--cCCcEEEEcccCChhhHhhcCHHHhhccCCCc--EEEEcCC
Q 007040 214 DL-L--AASDVISLHCAVTDETIQIINAECLQHIKPGA--FLVNTGS 255 (620)
Q Consensus 214 eL-L--~~sDvVil~lPlT~~T~~lI~~~~L~~MK~gA--iLINvgR 255 (620)
++ + ..+|+|+.|+|.... . +..-.+++.|+ ++|+.+-
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s-~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTT-E----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCS-H----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhh-H----HHHHHHHHcCCcEEEEeCCC
Confidence 44 2 579999999995422 1 12234467788 9998864
No 477
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.87 E-value=0.038 Score=56.78 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=32.8
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.|++|.|+|. |.||..+++.++..|++|++.+++..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~ 191 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE 191 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5889999997 99999999999999999999998653
No 478
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=92.86 E-value=0.15 Score=50.91 Aligned_cols=65 Identities=11% Similarity=-0.032 Sum_probs=44.9
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECC-CCCCCCc-----c----------ccCCceecCCHHhhhcCCcEEEE
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDV-PEGKGKV-----T----------FPSAARRMDTLNDLLAASDVISL 224 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr-~~~~~~~-----~----------~~~g~~~~~sL~eLL~~sDvVil 224 (620)
|++|.|.| .|-||+.+++.|...|++|++..+ ....... . .........++.++++.+|+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 57899998 699999999999999999999887 4321000 0 00011223456778889999988
Q ss_pred cc
Q 007040 225 HC 226 (620)
Q Consensus 225 ~l 226 (620)
+.
T Consensus 81 ~A 82 (322)
T 2p4h_X 81 TA 82 (322)
T ss_dssp CC
T ss_pred cC
Confidence 76
No 479
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.82 E-value=0.13 Score=53.22 Aligned_cols=68 Identities=18% Similarity=0.044 Sum_probs=49.3
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCc-------eecCCHHhhhcCCcEEEEcccC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAA-------RRMDTLNDLLAASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~-------~~~~sL~eLL~~sDvVil~lPl 228 (620)
.+++|.|.|. |.||+.+++.|...|++|+++++...........++ ...+++.+++..+|+|+.+...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 5789999987 999999999999999999999987644321111111 1122466778889999887654
No 480
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.80 E-value=0.039 Score=57.57 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=54.8
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee-----cCCHHhhhc-----CCcEEEEcccCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR-----MDTLNDLLA-----ASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~-----~~sL~eLL~-----~sDvVil~lPlT 229 (620)
.|.+|.|+| .|.||..+++.++.+|++|++.+++....+.....|... ..++.+.+. ..|+|+.++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 588999999 799999999999999999999998753322111112110 012222221 35777766653
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCC
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGS 255 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgR 255 (620)
+ . -...+..|+++..+|.+|.
T Consensus 242 ~----~-~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 A----M-FDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp H----H-HHHHHHHEEEEEEEEECCC
T ss_pred H----H-HHHHHHHHhcCCEEEEEeC
Confidence 1 1 1234566666666666654
No 481
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=92.79 E-value=0.069 Score=58.28 Aligned_cols=106 Identities=14% Similarity=0.090 Sum_probs=63.0
Q ss_pred cEEEEEeCChhhHHHHHHHhhC-CCEEE-EECCCCCCCCccc----c--------------------CCceecCCHHhhh
Q 007040 163 LVLGIVGRSASARALATRSLSF-KMSVL-YFDVPEGKGKVTF----P--------------------SAARRMDTLNDLL 216 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lkaf-G~~V~-~~dr~~~~~~~~~----~--------------------~g~~~~~sL~eLL 216 (620)
.+|||||+|.||+.++..+... +++|. ++|++........ . .....+.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4699999999999999988754 77755 5677764322111 1 0133567899999
Q ss_pred cC--CcEEEEcccCChhhHhhcCHHHhhccCCCcEEEEcCCCh-hhcHHHHHHHHHcCC
Q 007040 217 AA--SDVISLHCAVTDETIQIINAECLQHIKPGAFLVNTGSSQ-LLDDCAVKQLLIDGT 272 (620)
Q Consensus 217 ~~--sDvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINvgRG~-vVDe~AL~~AL~~G~ 272 (620)
+. .|+|++++|.. .. |. .-.+..|+.|.-++...-.- +..-..|.++-++..
T Consensus 104 ~d~dIDaVviaTp~p-~~-H~--e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~G 158 (446)
T 3upl_A 104 SNPLIDVIIDATGIP-EV-GA--ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQG 158 (446)
T ss_dssp TCTTCCEEEECSCCH-HH-HH--HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEcCCCh-HH-HH--HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhC
Confidence 84 89999999854 21 11 12344455565555321111 122344555555433
No 482
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.78 E-value=0.12 Score=51.37 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=34.8
Q ss_pred eeecCcEEEEEeCC---hhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 158 RRCRGLVLGIVGRS---ASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 158 ~~L~GktVGIIGlG---~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.+|.||++.|-|.+ .||+++|+.|...|++|++.+++..
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 46899999999975 6999999999999999999998753
No 483
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.72 E-value=0.79 Score=49.73 Aligned_cols=38 Identities=18% Similarity=-0.036 Sum_probs=35.4
Q ss_pred eeecCcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCC
Q 007040 158 RRCRGLVLGIVGRSASARALATRSLSFKMSVLYFDVPE 195 (620)
Q Consensus 158 ~~L~GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~ 195 (620)
.++.|++|.|||.|.+|.+.++.|...|++|+++++..
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 46899999999999999999999999999999999854
No 484
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=92.68 E-value=0.16 Score=53.24 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=35.1
Q ss_pred ceeecCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCC
Q 007040 157 MRRCRGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPE 195 (620)
Q Consensus 157 ~~~L~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~ 195 (620)
...|.+.+|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 31 q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 31 QKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 457899999999999999999999999998 899998653
No 485
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.63 E-value=0.059 Score=56.57 Aligned_cols=37 Identities=14% Similarity=0.049 Sum_probs=33.2
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCC-CEEEEECCCCCC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFK-MSVLYFDVPEGK 197 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG-~~V~~~dr~~~~ 197 (620)
.|.+|.|+|.|.||...++.++.+| .+|++.+++...
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 232 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 232 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHH
Confidence 5889999999999999999999999 599999987643
No 486
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.63 E-value=0.089 Score=56.55 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=61.6
Q ss_pred cCcEEEEEeCC----------hhhHHHHHHHhhCCCEEEEECCCCCCCC-----ccccC---C---ceecCCHHhhhcCC
Q 007040 161 RGLVLGIVGRS----------ASARALATRSLSFKMSVLYFDVPEGKGK-----VTFPS---A---ARRMDTLNDLLAAS 219 (620)
Q Consensus 161 ~GktVGIIGlG----------~IG~~vA~~LkafG~~V~~~dr~~~~~~-----~~~~~---g---~~~~~sL~eLL~~s 219 (620)
.|++|+|+|+. .-...|++.|...|++|.+|||...... ..+.. . .....++.+.+..+
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 68999999997 5689999999999999999999742211 01110 0 12346788899999
Q ss_pred cEEEEcccCChhhHhhcCHHHhhccCCCcEEEEc
Q 007040 220 DVISLHCAVTDETIQIINAECLQHIKPGAFLVNT 253 (620)
Q Consensus 220 DvVil~lPlT~~T~~lI~~~~L~~MK~gAiLINv 253 (620)
|+|+++.... +-+.+ + .+.|+ +.++|++
T Consensus 392 d~~vi~~~~~-~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGDE-LFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCCG-GGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCcH-HHHhh-h---HHhcC-CCEEEEC
Confidence 9999999874 33222 2 34565 6788886
No 487
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.63 E-value=0.033 Score=57.03 Aligned_cols=90 Identities=19% Similarity=0.044 Sum_probs=57.0
Q ss_pred cCcEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCcc-ccCCcee---c--CCHHhhh-----cCCcEEEEcccC
Q 007040 161 RGLVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKVT-FPSAARR---M--DTLNDLL-----AASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~~-~~~g~~~---~--~sL~eLL-----~~sDvVil~lPl 228 (620)
.|++|.|+|. |.||..+++.++..|++|++.+++....+.. ...+... . .++.+.+ ...|+|+.++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5889999999 9999999999999999999999875432211 1122211 0 1222221 136777776652
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcCCC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTGSS 256 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvgRG 256 (620)
. .-...+..|+++..+|.+|..
T Consensus 229 --~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 --E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCCG
T ss_pred --c----hHHHHHHHHhhCCEEEEEeec
Confidence 1 123456677777777777643
No 488
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=92.61 E-value=0.1 Score=54.04 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=44.8
Q ss_pred cEEEEEeCChhhHHHHHHHhh--CCCEE-EEECCCCCC-CCc-cccCCce-ecCCHHhhhc-----CCcEEEEccc
Q 007040 163 LVLGIVGRSASARALATRSLS--FKMSV-LYFDVPEGK-GKV-TFPSAAR-RMDTLNDLLA-----ASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGlG~IG~~vA~~Lka--fG~~V-~~~dr~~~~-~~~-~~~~g~~-~~~sL~eLL~-----~sDvVil~lP 227 (620)
.+|||||+|.||+.+++.+.. -++++ .++|+++.. ... ....+.. ...++++++. ..|+|+.++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 479999999999999999944 46665 466777654 221 1122332 2356777764 4799999999
No 489
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.59 E-value=0.18 Score=55.10 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=71.4
Q ss_pred eecCcEEEEEeC----------ChhhHHHHHHHhhCCCEEEEECCCCCCCC--cccc---------CCceecCCHHhhhc
Q 007040 159 RCRGLVLGIVGR----------SASARALATRSLSFKMSVLYFDVPEGKGK--VTFP---------SAARRMDTLNDLLA 217 (620)
Q Consensus 159 ~L~GktVGIIGl----------G~IG~~vA~~LkafG~~V~~~dr~~~~~~--~~~~---------~g~~~~~sL~eLL~ 217 (620)
.+.|++|+|+|+ ..-...|++.|...|++|.+|||...... .... ..+....++.+.+.
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 368999999997 45678999999999999999999863211 0000 01233467888999
Q ss_pred CCcEEEEcccCChhhHhhcCHHHh-hccCCCcEEEEcCCChhhcHHHHHH
Q 007040 218 ASDVISLHCAVTDETIQIINAECL-QHIKPGAFLVNTGSSQLLDDCAVKQ 266 (620)
Q Consensus 218 ~sDvVil~lPlT~~T~~lI~~~~L-~~MK~gAiLINvgRG~vVDe~AL~~ 266 (620)
.+|+|++++... +-+ -++-+.+ +.|+...++|++ |+ ++|.+.+.+
T Consensus 412 ~ad~~vi~t~~~-~f~-~~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~~ 457 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFV-ELNYSQIHNDMQHPAAIFDG-RL-ILDQKALRE 457 (481)
T ss_dssp TCSEEEECSCCG-GGT-TSCHHHHHHHSCSSCEEEES-SS-CSCHHHHHH
T ss_pred CCCEEEEcCCcH-Hhh-ccCHHHHHHhcCCCCEEEEC-CC-CCCHHHHHh
Confidence 999999999875 222 2354444 467766688885 55 456555443
No 490
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.58 E-value=0.041 Score=56.42 Aligned_cols=36 Identities=6% Similarity=-0.055 Sum_probs=33.1
Q ss_pred cCcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCC
Q 007040 161 RGLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEG 196 (620)
Q Consensus 161 ~GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~ 196 (620)
.|++|.|+| .|.||..+++.++..|++|++.+++..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 184 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE 184 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 688999999 899999999999999999999998653
No 491
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=92.55 E-value=0.21 Score=54.44 Aligned_cols=107 Identities=9% Similarity=0.115 Sum_probs=72.0
Q ss_pred ecCcEEEEEeCC----hhhHHHHHHHhhC-CCEEEEECCCCCCCCccccCCceecCCHHhhhcCCcEEEEcccCChhhHh
Q 007040 160 CRGLVLGIVGRS----ASARALATRSLSF-KMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAASDVISLHCAVTDETIQ 234 (620)
Q Consensus 160 L~GktVGIIGlG----~IG~~vA~~Lkaf-G~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~sDvVil~lPlT~~T~~ 234 (620)
+.-++|.|||.+ .+|..+++.|+.. +..|+.++|.... -.|...+.++.++-...|++++++|.. .+..
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~-----i~G~~~y~sl~~lp~~~Dlavi~vp~~-~~~~ 79 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-----VQGVKAYKSVKDIPDEIDLAIIVVPKR-FVKD 79 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-----ETTEECBSSTTSCSSCCSEEEECSCHH-HHHH
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCe-----ECCEeccCCHHHcCCCCCEEEEecCHH-HHHH
Confidence 456789999998 8899999999988 5899999987421 146666778999888899999999943 3334
Q ss_pred hcCHHHhhccCCCcEEEEc-CCChhhc-----HHHHHHHHHcCCcc
Q 007040 235 IINAECLQHIKPGAFLVNT-GSSQLLD-----DCAVKQLLIDGTLA 274 (620)
Q Consensus 235 lI~~~~L~~MK~gAiLINv-gRG~vVD-----e~AL~~AL~~G~I~ 274 (620)
++. +..+. .-..+++.+ +-.+.-+ +.++.+.+++..+.
T Consensus 80 ~v~-e~~~~-Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 80 TLI-QCGEK-GVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHH-HHHHH-TCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHH-HHHHc-CCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 443 23332 233333333 3322223 67788877765554
No 492
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=92.54 E-value=0.089 Score=49.23 Aligned_cols=59 Identities=15% Similarity=0.180 Sum_probs=41.6
Q ss_pred EEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCceecCCHHhhhcC---CcEEEEccc
Q 007040 164 VLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARRMDTLNDLLAA---SDVISLHCA 227 (620)
Q Consensus 164 tVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~~~sL~eLL~~---sDvVil~lP 227 (620)
++.|.| .|.||+.+++.|. .|++|++.+++.... .......+++++++.. .|+|+.+.-
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~----~~D~~~~~~~~~~~~~~~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDV----TVDITNIDSIKKMYEQVGKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSE----ECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccce----eeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence 688886 5899999999999 999999999875311 1111222345555554 799988764
No 493
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=92.53 E-value=0.25 Score=53.48 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=31.7
Q ss_pred eecCcEEEEEeCChhhHHHHHHHhhCCCEEE-EECC
Q 007040 159 RCRGLVLGIVGRSASARALATRSLSFKMSVL-YFDV 193 (620)
Q Consensus 159 ~L~GktVGIIGlG~IG~~vA~~LkafG~~V~-~~dr 193 (620)
++.|+++.|.|+|++|+.+|+.|..+|++|+ +.|.
T Consensus 207 ~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 207 GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5899999999999999999999999999998 4454
No 494
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.50 E-value=0.4 Score=48.09 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=38.0
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhC-CCEEEE-ECCCCCCCCccccCCceecCCHHhhhc-CCcEEEEccc
Q 007040 163 LVLGIVGR-SASARALATRSLSF-KMSVLY-FDVPEGKGKVTFPSAARRMDTLNDLLA-ASDVISLHCA 227 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~Lkaf-G~~V~~-~dr~~~~~~~~~~~g~~~~~sL~eLL~-~sDvVil~lP 227 (620)
++|+|+|. |+||+.+++.+... |++|.+ +|+. .++++++. .+|+|+-+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccC
Confidence 36999995 99999999999865 898874 4542 24666665 7999995554
No 495
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.49 E-value=0.037 Score=57.40 Aligned_cols=142 Identities=15% Similarity=0.109 Sum_probs=77.3
Q ss_pred cCcEEEEE-eCChhhHHHHHHHhhCCCEEEEECCCCCCCCccccCCcee-----cCCHHhhh-----cCCcEEEEcccCC
Q 007040 161 RGLVLGIV-GRSASARALATRSLSFKMSVLYFDVPEGKGKVTFPSAARR-----MDTLNDLL-----AASDVISLHCAVT 229 (620)
Q Consensus 161 ~GktVGII-GlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~~~g~~~-----~~sL~eLL-----~~sDvVil~lPlT 229 (620)
.|++|.|+ |.|.||..+++.++..|++|++.+++....+.....+... ..++.+.+ ...|+|+.++...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 58899999 6899999999999999999999998764322111111110 01222222 1367776666521
Q ss_pred hhhHhhcCHHHhhccCCCcEEEEcCCChhhcHHHHHHHHHcCCcceeEeecCCCCCCCCccccCCCcEEE-cCCCCCCcH
Q 007040 230 DETIQIINAECLQHIKPGAFLVNTGSSQLLDDCAVKQLLIDGTLAGCALDGAEGPQWMEAWVREMPNVLI-LPRSADYSE 308 (620)
Q Consensus 230 ~~T~~lI~~~~L~~MK~gAiLINvgRG~vVDe~AL~~AL~~G~I~GAaLDV~E~P~~~~spL~~~pNVIl-TPHiAg~T~ 308 (620)
.-...+..|+++..+|.+|... +... ..+| -.+++. .|+.+ .-.......
T Consensus 247 ------~~~~~~~~l~~~G~iv~~g~~~-------------~~~~-~~~~--------~~~~~~-~~~~i~g~~~~~~~~ 297 (353)
T 4dup_A 247 ------YFERNIASLAKDGCLSIIAFLG-------------GAVA-EKVN--------LSPIMV-KRLTVTGSTMRPRTA 297 (353)
T ss_dssp ------GHHHHHHTEEEEEEEEECCCTT-------------CSEE-EEEE--------CHHHHH-TTCEEEECCSTTSCH
T ss_pred ------HHHHHHHHhccCCEEEEEEecC-------------CCcc-cCCC--------HHHHHh-cCceEEEEeccccch
Confidence 1133456666666666665321 0000 0011 011211 23322 333444454
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Q 007040 309 EVWMEIRDKAISVLQTFFFDGVI 331 (620)
Q Consensus 309 ea~~~~~~~a~enL~~~L~~G~~ 331 (620)
+.........++.+.+++..|+.
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~g~l 320 (353)
T 4dup_A 298 EEKRAIRDDLLSEVWPLLEAGTV 320 (353)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTSS
T ss_pred hhhHHHHHHHHHHHHHHHHCCCc
Confidence 44555666667777778888874
No 496
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=92.49 E-value=0.18 Score=50.91 Aligned_cols=65 Identities=14% Similarity=0.004 Sum_probs=46.3
Q ss_pred CcEEEEEe-CChhhHHHHHHHhhCCCEEEEECCCCCCCCc-----ccc--CCc-------eecCCHHhhhcCCcEEEEcc
Q 007040 162 GLVLGIVG-RSASARALATRSLSFKMSVLYFDVPEGKGKV-----TFP--SAA-------RRMDTLNDLLAASDVISLHC 226 (620)
Q Consensus 162 GktVGIIG-lG~IG~~vA~~LkafG~~V~~~dr~~~~~~~-----~~~--~g~-------~~~~sL~eLL~~sDvVil~l 226 (620)
+++|.|.| .|-||+.+++.|...|++|++..++...... ... ..+ .....+.+++..+|+|+.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 68899999 7999999999999999999988776532110 000 111 12245677888999998765
No 497
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.45 E-value=0.082 Score=54.54 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=50.3
Q ss_pred ecCcEEEEEe-CChhhHHHHHHHhhC-CC-EEEEECCCCCCCC-----------ccccCCceecCCHHhhhcCCcEEEEc
Q 007040 160 CRGLVLGIVG-RSASARALATRSLSF-KM-SVLYFDVPEGKGK-----------VTFPSAARRMDTLNDLLAASDVISLH 225 (620)
Q Consensus 160 L~GktVGIIG-lG~IG~~vA~~Lkaf-G~-~V~~~dr~~~~~~-----------~~~~~g~~~~~sL~eLL~~sDvVil~ 225 (620)
+.|++|.|.| .|.||+.+++.|... |+ +|+++++...... ..+...+...+.+.+++...|+|+.+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 6789999998 699999999999988 98 9999998753211 00000111223466788899999988
Q ss_pred ccCC
Q 007040 226 CAVT 229 (620)
Q Consensus 226 lPlT 229 (620)
....
T Consensus 99 Aa~~ 102 (344)
T 2gn4_A 99 AALK 102 (344)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 498
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=92.40 E-value=0.086 Score=51.68 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=47.7
Q ss_pred cEEEEEeC-ChhhHHHHHHHhhCCCEEEEECCCCCCCCc----cccCCceecCCHHhhhcCCcEEEEcccCC
Q 007040 163 LVLGIVGR-SASARALATRSLSFKMSVLYFDVPEGKGKV----TFPSAARRMDTLNDLLAASDVISLHCAVT 229 (620)
Q Consensus 163 ktVGIIGl-G~IG~~vA~~LkafG~~V~~~dr~~~~~~~----~~~~g~~~~~sL~eLL~~sDvVil~lPlT 229 (620)
++|.|.|. |.||+.+++.|...|++|++++++...... .........+.+.+++...|+|+.+....
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 74 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS 74 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCC
Confidence 57899987 999999999999999999999987643210 00001112234667888899999887543
No 499
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.40 E-value=0.047 Score=56.49 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=54.6
Q ss_pred cCcEEEEEeCChhhHHHHHHHhhCCC-EEEEECCCCCCCCccccCCcee-----cCCHH----hhhc--CCcEEEEcccC
Q 007040 161 RGLVLGIVGRSASARALATRSLSFKM-SVLYFDVPEGKGKVTFPSAARR-----MDTLN----DLLA--ASDVISLHCAV 228 (620)
Q Consensus 161 ~GktVGIIGlG~IG~~vA~~LkafG~-~V~~~dr~~~~~~~~~~~g~~~-----~~sL~----eLL~--~sDvVil~lPl 228 (620)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|... ..++. ++.. ..|+|+.++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 58889999999999999999999999 8999998764322111122211 01121 1111 36777766653
Q ss_pred ChhhHhhcCHHHhhccCCCcEEEEcC
Q 007040 229 TDETIQIINAECLQHIKPGAFLVNTG 254 (620)
Q Consensus 229 T~~T~~lI~~~~L~~MK~gAiLINvg 254 (620)
... -...+..++++..+|.+|
T Consensus 246 ~~~-----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VHT-----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTH-----HHHHHHHEEEEEEEEECC
T ss_pred hHH-----HHHHHHHHhcCCEEEEec
Confidence 211 123455666666666665
No 500
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.40 E-value=0.046 Score=59.58 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=48.2
Q ss_pred CcEEEEEeCChhhHHHHHHHhhCCCEEEEECCCCCCCCccc-cCCc-------eecCCHHhh-hcCCcEEEEcccCC
Q 007040 162 GLVLGIVGRSASARALATRSLSFKMSVLYFDVPEGKGKVTF-PSAA-------RRMDTLNDL-LAASDVISLHCAVT 229 (620)
Q Consensus 162 GktVGIIGlG~IG~~vA~~LkafG~~V~~~dr~~~~~~~~~-~~g~-------~~~~sL~eL-L~~sDvVil~lPlT 229 (620)
.|+|-|+|+|.+|+.+|+.|...|+.|++.|..+....... ..++ ...+.|.++ +.+||+++.+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 57899999999999999999999999999998864332111 0111 122235554 67899988777643
Done!