Query 007041
Match_columns 620
No_of_seqs 258 out of 1052
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 15:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007041.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007041hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 6E-111 2E-115 918.0 30.0 424 109-589 3-431 (433)
2 1ia6_A Cellulase CEL9M; cellul 100.0 2E-109 7E-114 907.7 32.1 420 107-590 2-430 (441)
3 2xfg_A Endoglucanase 1; hydrol 100.0 1E-108 3E-113 906.2 33.8 435 104-590 19-463 (466)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 7E-109 3E-113 933.3 32.9 433 107-590 2-444 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 5E-108 2E-112 927.2 27.1 439 104-590 33-516 (611)
6 1g87_A Endocellulase 9G; endog 100.0 1E-106 5E-111 915.5 35.3 430 108-590 3-440 (614)
7 3gzk_A Cellulase; fold from GH 100.0 1E-103 3E-108 881.1 23.3 459 40-590 43-535 (537)
8 1clc_A Endoglucanase CELD; EC: 100.0 2E-102 6E-107 886.6 29.1 453 57-589 93-564 (639)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 5E-100 2E-104 863.1 29.1 497 40-589 43-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 3.5E-72 1.2E-76 626.1 21.3 458 40-585 43-563 (586)
11 2gz6_A N-acetyl-D-glucosamine 94.4 0.071 2.4E-06 56.1 7.9 141 176-355 52-199 (388)
12 2gz6_A N-acetyl-D-glucosamine 93.7 0.87 3E-05 47.6 14.5 80 271-355 55-142 (388)
13 3gt5_A N-acetylglucosamine 2-e 93.3 0.41 1.4E-05 50.9 11.2 122 198-355 69-200 (402)
14 3k7x_A LIN0763 protein; Q92DQ0 92.8 1 3.5E-05 47.2 13.2 123 198-356 109-241 (349)
15 3k7x_A LIN0763 protein; Q92DQ0 92.7 0.32 1.1E-05 51.0 9.2 66 274-355 51-119 (349)
16 3gt5_A N-acetylglucosamine 2-e 92.0 0.95 3.3E-05 48.1 11.9 136 200-355 192-337 (402)
17 2zzr_A Unsaturated glucuronyl 91.6 0.46 1.6E-05 50.9 8.9 127 199-355 132-273 (397)
18 1nc5_A Hypothetical protein YT 91.0 2.9 0.0001 43.9 14.4 70 271-355 43-114 (373)
19 2ahf_A Unsaturated glucuronyl 89.6 1.1 3.7E-05 47.7 9.5 127 200-355 107-248 (377)
20 3k4z_A Glycoside hydrolase fam 87.4 0.14 4.9E-06 52.5 0.8 40 40-79 224-264 (289)
21 1fp3_A N-acyl-D-glucosamine 2- 87.3 2.4 8.1E-05 44.6 10.3 119 201-355 14-149 (402)
22 1fp3_A N-acyl-D-glucosamine 2- 84.2 2 6.8E-05 45.3 7.8 85 264-355 244-341 (402)
23 3pmm_A Putative cytoplasmic pr 82.1 54 0.0018 34.4 20.4 113 200-355 25-137 (382)
24 3k11_A Putative glycosyl hydro 79.9 5.9 0.0002 42.9 9.6 115 197-347 287-417 (445)
25 3k11_A Putative glycosyl hydro 74.4 43 0.0015 36.2 14.4 75 272-355 85-172 (445)
26 2zbl_A Putative isomerase; N-a 70.7 12 0.00042 39.7 9.0 140 176-354 50-198 (421)
27 3pmm_A Putative cytoplasmic pr 69.7 51 0.0017 34.6 13.5 72 277-355 118-197 (382)
28 2zbl_A Putative isomerase; N-a 65.6 9.1 0.00031 40.7 6.7 88 263-355 243-343 (421)
29 3e6u_A LANC-like protein 1; al 64.1 41 0.0014 35.6 11.5 115 198-355 248-362 (411)
30 1gxm_A Pectate lyase; mechanis 63.6 41 0.0014 34.9 10.9 81 199-310 92-182 (332)
31 1nc5_A Hypothetical protein YT 57.1 11 0.00039 39.3 5.5 61 294-355 107-170 (373)
32 2g0d_A Nisin biosynthesis prot 48.3 1.4E+02 0.0049 30.8 12.4 72 271-355 281-352 (409)
33 2p0v_A Hypothetical protein BT 46.4 94 0.0032 33.9 10.6 99 201-308 205-318 (489)
34 1r76_A Pectate lyase; A-helica 44.2 78 0.0027 33.7 9.4 83 199-310 170-258 (408)
35 3e6u_A LANC-like protein 1; al 32.5 3E+02 0.01 28.8 11.8 66 272-352 78-144 (411)
36 2ahf_A Unsaturated glucuronyl 32.4 1.1E+02 0.0038 32.1 8.3 146 179-354 154-311 (377)
37 2v8i_A Pectate lyase; periplas 24.0 41 0.0014 36.5 3.1 73 273-355 377-453 (543)
38 2zzr_A Unsaturated glucuronyl 21.6 2.7E+02 0.0092 29.4 8.9 31 198-232 190-221 (397)
39 2fba_A Glucoamylase Glu1; (alp 21.2 2.5E+02 0.0084 30.5 8.7 75 200-309 183-260 (492)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=6.4e-111 Score=918.05 Aligned_cols=424 Identities=39% Similarity=0.685 Sum_probs=384.3
Q ss_pred hhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHHHHH
Q 007041 109 DNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIE 188 (620)
Q Consensus 109 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e 188 (620)
.+|.++|+++|+||++||||++|.+++++||++||+.||.+. ++||+|||||||||+||++|+++++++|+|+++|
T Consensus 3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e 78 (433)
T 1ks8_A 3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQ----GQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLID 78 (433)
T ss_dssp CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTT----CCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcC----cccCCCceeECCCCCeeccchHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999998765 8999999999999999999999999999999999
Q ss_pred hHHHHhhcCChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC---
Q 007041 189 YSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECS--- 265 (620)
Q Consensus 189 ~~~~~~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~--- 265 (620)
|++.|++++++||||||||||+|||||||+++ |.||+|||++.. ||.||.+||+|+++|++|+++
T Consensus 79 ~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----g~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~~y~~~~~~ 146 (433)
T 1ks8_A 79 FEAGYSSAGALDDGRKAVKWATDYFIKAHTSQ----NEFYGQVGQGDA--------DHAFWGRPEDMTMARPAYKIDTSR 146 (433)
T ss_dssp THHHHHHTTCHHHHHHHHHHHHHHHHHHCCBT----TBEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEECSSS
T ss_pred hHHhhhcCCchHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------CCcccCCHhhCCCCCceeeccCCC
Confidence 99999999999999999999999999999988 999999999866 999999999999999999876
Q ss_pred CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHHHHHh
Q 007041 266 SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYAT 344 (620)
Q Consensus 266 ~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aT 344 (620)
|++++++++|||||+|||||| .|++||++||++||++|+||++||+.|.+..+...++|+|+++.||++|||+|||+||
T Consensus 147 pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aT 226 (433)
T 1ks8_A 147 PGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRAT 226 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHh
Confidence 899999999999999999999 8999999999999999999999999998776666789999999999999999999999
Q ss_pred CChhhHHHhhcCCCCCCCccccCcCCCccccccchhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhhcCCCCc
Q 007041 345 GNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTT 424 (620)
Q Consensus 345 G~~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~~~~~ 424 (620)
|+++|++++++++ ..+........|+|++|..+++++|+++.. .+.|++.++..+|.++..
T Consensus 227 gd~~Yl~~~~~~~-----~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~-----------~~~~~~~~~~~~~~~~~~--- 287 (433)
T 1ks8_A 227 NDNTYLNTAESLY-----DEFGLQNWGGGLNWDSKVSGVQVLLAKLTN-----------KQAYKDTVQSYVNYLINN--- 287 (433)
T ss_dssp CCHHHHHHHHHHH-----HHTTGGGSCCCCCSSCCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHT---
T ss_pred CCHHHHHHHHHHH-----HhcCcCcCcCCcCccchhhHHHHHHhhccC-----------hHHHHHHHHHHHHHHHhc---
Confidence 9999999998753 111111234579999999999999988631 246778888888877742
Q ss_pred cccCC-CceeecCCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCCCceEee
Q 007041 425 WNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVG 503 (620)
Q Consensus 425 ~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG 503 (620)
...|| |+++.. .||||+|++|++|++++++++. +++++|+++|++|||||||+| ++|||||
T Consensus 288 ~~~tp~Gl~~~~--~WGs~~~~~n~a~l~~~~~~~~--------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG 349 (433)
T 1ks8_A 288 QQKTPKGLLYID--MWGTLRHAANAAFIMLEAAELG--------------LSASSYRQFAQTQIDYALGDG--GRSFVCG 349 (433)
T ss_dssp SCBCTTSCBCCC--STTHHHHHHHHHHHHHHHHHTT--------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTT
T ss_pred CCcCCCCceeec--CCchhHHHHHHHHHHHHHHhcC--------------CCHHHHHHHHHHhHhhccCCC--CcceEec
Confidence 46789 998864 5799999999999999999841 478999999999999999998 6899999
Q ss_pred cCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCCCCCcccccccccccccccccchHHHHHH
Q 007041 504 FGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAAL 583 (620)
Q Consensus 504 ~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~al 583 (620)
||+|+|++||||+++||.. +..|..| +.+++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++|
T Consensus 350 ~G~~~p~~pHHR~s~~~~~--~~~c~~~--~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~l 425 (433)
T 1ks8_A 350 FGSNPPTRPHHRSSSCPPA--PATCDWN--TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSAL 425 (433)
T ss_dssp SSSSCCSCCSCHHHHCCCT--TSCCSHH--HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCcchhhcCCCc--ccccccc--ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHH
Confidence 9999999999999999864 4588544 58889999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q 007041 584 VALSGE 589 (620)
Q Consensus 584 a~l~~~ 589 (620)
|+|...
T Consensus 426 a~l~~~ 431 (433)
T 1ks8_A 426 AALVAL 431 (433)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999864
No 2
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=2e-109 Score=907.69 Aligned_cols=420 Identities=33% Similarity=0.584 Sum_probs=371.5
Q ss_pred CchhHHHHHHHHHHHHHHhhcCCCCC-CCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHH
Q 007041 107 RPDNYTLALHKALMFFNAQRSGKLPK-HNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWS 185 (620)
Q Consensus 107 ~~~~Y~~~l~~sl~ff~~QRsG~lp~-~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~ 185 (620)
++++|.++|+++|+||++||||++|+ .++++||++||++||.+. ++||+|||||||||+||++|+++++++|+|+
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~ 77 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDV----GVDLTGGYHDAGDHVKFGLPQGYSAAILGWS 77 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTT----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCC----cccCCCCeeeCCCCCeeccchHHHHHHHHHH
Confidence 35789999999999999999999887 899999999999998755 9999999999999999999999999999999
Q ss_pred HHHhHHHHhhcCChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcce-eec
Q 007041 186 VIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPV-TEC 264 (620)
Q Consensus 186 ~~e~~~~~~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v-~~~ 264 (620)
++||++.|++.++++|||||||||+|||||||+++ +.||+|||++.. ||.||.+||+|+.+|++ |.+
T Consensus 78 ~~e~~~~~~~~g~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~~~y~~ 145 (441)
T 1ia6_A 78 LYEFKESFDATGNTTKMLQQLKYFTDYFLKSHPNS----TTFYYQVGEGNA--------DHTYWGAPEEQTGQRPSLYKA 145 (441)
T ss_dssp HHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HTTCCSCGGGCCSCCCCCEEE
T ss_pred HHHhHHHHhhcCcHHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCChhhCCCCCceeeEe
Confidence 99999999999999999999999999999999887 999999999866 99999999999999998 877
Q ss_pred C---CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHH
Q 007041 265 S---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWL 340 (620)
Q Consensus 265 ~---~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeL 340 (620)
+ |+++++|++|||||+|||||| .|++||++||++||++|+||++||+.+. ..++|+|+++.||++|||+||
T Consensus 146 ~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-----~~~~Y~ss~~~DE~~WAAa~L 220 (441)
T 1ia6_A 146 DPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-----GQSFYQATSFGDDLAWAATWL 220 (441)
T ss_dssp BTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-----CTTTSCCCCSHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCchhHHHHHHHHH
Confidence 5 789999999999999999999 8999999999999999999999998543 357999999999999999999
Q ss_pred HHHhCChhhHHHhhcCCCCCCCccccC--cCCCccccccchhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhh
Q 007041 341 YYATGNSSYLQLATTPGLGKHAGVFWG--ILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSY 418 (620)
Q Consensus 341 y~aTG~~~Yl~~a~~~~~~~~~~~~~~--~~~~~~~~Wd~~~~~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y 418 (620)
|+|||+++|+++++++.. +...... ......|+||+|..++++||+++.. ...|++.++..++.+
T Consensus 221 y~aTgd~~Yl~~a~~~~~--~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~-----------~~~~~~~~~~~~~~~ 287 (441)
T 1ia6_A 221 YTATNDSTYITDAEQFIT--LGNTMNENKMQDKWTMCWDDMYVPAALRLAQITG-----------KQIYKDAIEFNFNYW 287 (441)
T ss_dssp HHHHCCTHHHHHHHHHTT--C------CGGGCSSCSSSSCCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHh--hhhhcccccccCCCcCCccchHHHHHHHHHhccC-----------cHHHHHHHHHHHHHH
Confidence 999999999999987542 1111100 1124579999999999999988631 134666666666655
Q ss_pred cCCCCccccCC-CceeecCCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCC
Q 007041 419 LPTFTTWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRK 497 (620)
Q Consensus 419 ~~~~~~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~ 497 (620)
+ .....|| |+.+.. .||||+|++|++||+++|++++ ++++|+++|++|||||||+||++
T Consensus 288 ~---~~~~~tp~Gl~~~~--~WGs~~~~~~~a~l~~~~~~~~---------------~~~~y~~~A~~qldYiLG~NP~~ 347 (441)
T 1ia6_A 288 K---TQVTTTPGGLKWLS--NWGVLRYAAAESMVMLVYCKQN---------------PDQSLLDLAKKQVDYILGDNPAN 347 (441)
T ss_dssp H---HTSCBCTTSCBCCC--STTHHHHHHHHHHHHHHHHHHS---------------CCHHHHHHHHHHHHHHHTCSTTC
T ss_pred H---hhcccCCCCceecC--CcchHHHHHHHHHHHHHHHhhc---------------CHHHHHHHHHHHHHHhcCCCCCC
Confidence 4 2346799 998754 4799999999999999999853 56899999999999999999999
Q ss_pred CceEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCCCCCcccccccccccccccccch
Q 007041 498 MSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNA 577 (620)
Q Consensus 498 ~SyVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA 577 (620)
+|||||||+|+|++||||+++||.. .+.+.+.|||++|+|+||||||..|+|.|+|.+|++|||||||||
T Consensus 348 ~SyvvG~G~~~p~~pHHR~s~~~~~----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA 417 (441)
T 1ia6_A 348 MSYIIGYGSNWCIHPHHRAANGYTY----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNA 417 (441)
T ss_dssp CCSBTTSSSSCCSCCBCHHHHCCCC----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHH
T ss_pred ceeEEecCCCCCCCCcChhhccCCc----------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhH
Confidence 9999999999999999999998742 135678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 007041 578 GLVAALVALSGEK 590 (620)
Q Consensus 578 ~lv~ala~l~~~~ 590 (620)
+||++||+|....
T Consensus 418 ~~v~~la~l~~~~ 430 (441)
T 1ia6_A 418 GLVGVLAGAIKFF 430 (441)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 3
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=9.9e-109 Score=906.24 Aligned_cols=435 Identities=36% Similarity=0.575 Sum_probs=374.9
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHH
Q 007041 104 SHARPDNYTLALHKALMFFNAQRSGKL-PKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITML 182 (620)
Q Consensus 104 f~i~~~~Y~~~l~~sl~ff~~QRsG~l-p~~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L 182 (620)
+..++++|.++|+++|+||++||||++ |+.++++||++||+.||.+. ++||+|||||||||+||++|+|+++++|
T Consensus 19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~----~~DlsGGwyDAGD~~Ky~~~~a~t~~~L 94 (466)
T 2xfg_A 19 PATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDA----GIDLTGGWYDAGDHVKFNLPMSYSAAML 94 (466)
T ss_dssp --CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccc----cccCCCCceeCCCCCeeccccHHHHHHH
Confidence 456678999999999999999999998 99999999999999998765 8999999999999999999999999999
Q ss_pred HHHHHHhHHHHhhcCChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccee
Q 007041 183 SWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVT 262 (620)
Q Consensus 183 ~w~~~e~~~~~~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~ 262 (620)
+|+++||++.|++.++++|||||||||+|||||||+++ +.||+|||++.. ||.||.+||+|+.+|++|
T Consensus 95 ~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~W~~pe~~~~~R~~y 162 (466)
T 2xfg_A 95 GWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEK----DVYYYQVGDGHA--------DHAWWGPAEVMPMERPSY 162 (466)
T ss_dssp HHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TEEEEEESCHHH--------HHTCCSCGGGCCSCCCEE
T ss_pred HHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCCcccCCCCCcee
Confidence 99999999999999999999999999999999998887 999999999865 999999999999889988
Q ss_pred ecC---CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCC-CCcchhHHHHH
Q 007041 263 ECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNS-TSYWDEFIWGG 337 (620)
Q Consensus 263 ~~~---~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s-~~~~DE~~wAA 337 (620)
.++ |++++++++|||||+|||||| +|++||++||++||++|+||++||+.|.. +..+++|+| +++.||++|||
T Consensus 163 ~i~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~~~~~~Y~s~s~~~DEl~WAA 240 (466)
T 2xfg_A 163 KVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--TAANGFYNSWSGFYDELSWAA 240 (466)
T ss_dssp EEESSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--CTTTTTSCCSSCSHHHHHHHH
T ss_pred EecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--CccccccCCCCCCchHHHHHH
Confidence 764 899999999999999999999 99999999999999999999999998843 345789999 99999999999
Q ss_pred HHHHHHhCChhhHHHhhcCCCCCCC-ccccCcCCCccccccchhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHH
Q 007041 338 AWLYYATGNSSYLQLATTPGLGKHA-GVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMC 416 (620)
Q Consensus 338 aeLy~aTG~~~Yl~~a~~~~~~~~~-~~~~~~~~~~~~~Wd~~~~~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~ 416 (620)
+|||+|||+++|+++++.+...... .........+.|+||+|..++++||+++.. .+ . .|++.++..++
T Consensus 241 awLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~~----~----~~~~~~~~~~~ 310 (466)
T 2xfg_A 241 VWLYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKN--DN----G----KYKEAIERHLD 310 (466)
T ss_dssp HHHHHHHCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHHC--SS----C----HHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhcC--Cc----H----HHHHHHHHHHH
Confidence 9999999999999999875421000 000001223579999999999999998632 11 0 23344444444
Q ss_pred hhcCCC--CccccCC-CceeecCCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhcccccccc
Q 007041 417 SYLPTF--TTWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGK 493 (620)
Q Consensus 417 ~y~~~~--~~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~ 493 (620)
.++... ....+|| ||++... ||||||++|++||+++|++++. |+ .+.+++|+++|++|||||||+
T Consensus 311 ~~~~~~~~~~~~~tp~Gl~~~~~--Wgs~~~~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~ 378 (466)
T 2xfg_A 311 WWTTGYNGERITYTPKGLAWLDQ--WGSLRYATTTAFLACVYSDWEN--------GD--KEKAKTYLEFARSQADYALGS 378 (466)
T ss_dssp HHTTCBTTBCCCBCTTSCBCCCS--SSHHHHHHHHHHHHHHHHTCTT--------SC--HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhccCCCccccCCccccccCC--CCchHHHHHHHHHHHHHHHhcC--------CC--cccHHHHHHHHHHhHHhhcCC
Confidence 444321 2357799 9988764 7999999999999999999642 53 235899999999999999999
Q ss_pred CCCCCceEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCCCCCccccccccccccccc
Q 007041 494 NPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTL 573 (620)
Q Consensus 494 NP~~~SyVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaI 573 (620)
| ++|||||||+|+|++||||+++||.. .+.+++.|||++|+|+||||||..|+|.|+|.+|++|||||
T Consensus 379 N--~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvai 446 (466)
T 2xfg_A 379 T--GRSFVVGFGENPPKRPHHRTAHGSWA----------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVAC 446 (466)
T ss_dssp T--SSCCBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCH
T ss_pred C--CcceEeccCCCCCCCCcCchhccCcc----------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccch
Confidence 9 99999999999999999999988742 13456889999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHhhcCC
Q 007041 574 AGNAGLVAALVALSGEK 590 (620)
Q Consensus 574 d~NA~lv~ala~l~~~~ 590 (620)
||||+||++||+|....
T Consensus 447 d~NA~~v~~la~l~~~~ 463 (466)
T 2xfg_A 447 DYNAGFVGLLAKMYKLY 463 (466)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHc
Confidence 99999999999998753
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=7.4e-109 Score=933.26 Aligned_cols=433 Identities=39% Similarity=0.626 Sum_probs=383.0
Q ss_pred CchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHHH
Q 007041 107 RPDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSV 186 (620)
Q Consensus 107 ~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~ 186 (620)
++++|.++|+++|+||++||||++|+.++++||++|||.||.+. ++||+|||||||||+||++|+|++++||+|++
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~----~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~ 77 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADV----GLDLTGGWYDAGDHVKFGFPMAFTATMLAWGA 77 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccc----cccCCCceeECCCCCEeccchHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999998765 89999999999999999999999999999999
Q ss_pred HHhHHHHhhcCChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC-
Q 007041 187 IEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECS- 265 (620)
Q Consensus 187 ~e~~~~~~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~- 265 (620)
+||++.|++.++++|||||||||+|||||||+++ +.||.|||++.. ||.||.+||+|+.+|++|.++
T Consensus 78 ~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~m~~~r~~y~~~~ 145 (605)
T 1tf4_A 78 IESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA--------DHKWWGPAEVMPMERPSFKVDP 145 (605)
T ss_dssp HHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TBEEEEESCHHH--------HHHCCSCGGGCCSCCCEEEEBT
T ss_pred HHhHHHHhhcCCcccHHHHHHHHHHHHHHhccCC----CeEEEEeCCCCc--------CccccCChhhCCCCCceeEecC
Confidence 9999999999999999999999999999999887 899999999865 999999999999999999875
Q ss_pred --CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCC-CCcchhHHHHHHHHH
Q 007041 266 --SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNS-TSYWDEFIWGGAWLY 341 (620)
Q Consensus 266 --~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s-~~~~DE~~wAAaeLy 341 (620)
|+++++|++|||||+|||||| .|++||++||++||++|+||++||+.|.++.+ ++++|+| +++.||++|||+|||
T Consensus 146 ~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy 224 (605)
T 1tf4_A 146 SCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLY 224 (605)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHHHHHHHH
Confidence 789999999999999999999 89999999999999999999999999988777 7889999 999999999999999
Q ss_pred HHhCChhhHHHhhcCCCCCCCccccC-cCCCccccccchhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhhcC
Q 007041 342 YATGNSSYLQLATTPGLGKHAGVFWG-ILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLP 420 (620)
Q Consensus 342 ~aTG~~~Yl~~a~~~~~~~~~~~~~~-~~~~~~~~Wd~~~~~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~ 420 (620)
+|||+++|+++++.+...-....... ....+.|+||+|..++++||+++.. .+.|++.++.++|.+++
T Consensus 225 ~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~-----------~~~y~~~a~~~~~~~~~ 293 (605)
T 1tf4_A 225 KATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG-----------KQKYIDDANRWLDYWTV 293 (605)
T ss_dssp HHHCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHTTT
T ss_pred HHhCCHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHhccC-----------hHHHHHHHHHHHHHHhc
Confidence 99999999999987531000000000 0112579999999999999987631 25688889989898875
Q ss_pred CCC--ccccCC-CceeecCCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCC
Q 007041 421 TFT--TWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRK 497 (620)
Q Consensus 421 ~~~--~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~ 497 (620)
... ...+|| |+.+... ||||||++|++||+++|++++.. .++.++|+++|++|||||||+||++
T Consensus 294 ~~~~~~~~~tp~Gl~~~~~--WGs~~~~~n~a~l~~~~a~~~~~-----------~~~~~~y~~~A~~qidYiLG~Np~~ 360 (605)
T 1tf4_A 294 GVNGQRVPYSPGGMAVLDT--WGALRYAANTAFVALVYAKVIDD-----------PVRKQRYHDFAVRQINYALGDNPRN 360 (605)
T ss_dssp CBTTBCCCBCTTSCBCCCS--SSHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHHHHHHTCSTTC
T ss_pred ccCCCccccCCCcceecCC--ccHHHHHHHHHHHHHHHHHhccc-----------cccHHHHHHHHHHHHHHhcCCCCCC
Confidence 332 346799 9987764 79999999999999999997631 1357899999999999999999999
Q ss_pred CceEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCC-CCCcccccccccccccccccc
Q 007041 498 MSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDK-HDGFRDVRTNYNYTEPTLAGN 576 (620)
Q Consensus 498 ~SyVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~-~d~y~D~r~~y~~NEvaId~N 576 (620)
+|||||||+|+|++||||+++|+.. .+.+++.|||++|+|+||||||. .|+|.|+|.+|++||||||||
T Consensus 361 ~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~N 430 (605)
T 1tf4_A 361 SSYVVGFGNNPPRNPHHRTAHGSWT----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYN 430 (605)
T ss_dssp CCSBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGG
T ss_pred cceEecCCCCCCCCCcccccccCcc----------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccc
Confidence 9999999999999999999986421 12346788999999999999998 999999999999999999999
Q ss_pred hHHHHHHHHhhcCC
Q 007041 577 AGLVAALVALSGEK 590 (620)
Q Consensus 577 A~lv~ala~l~~~~ 590 (620)
|+||++||+|....
T Consensus 431 A~lv~~lA~l~~~~ 444 (605)
T 1tf4_A 431 AGFSSALAMLVEEY 444 (605)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc
Confidence 99999999999875
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=5.3e-108 Score=927.20 Aligned_cols=439 Identities=29% Similarity=0.480 Sum_probs=376.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcCCCCC-CCCCCCCCCCCCCCCCCC----------------------CCCCcccccc
Q 007041 104 SHARPDNYTLALHKALMFFNAQRSGKLPK-HNNVSWRGNSCLKDGKSA----------------------SSSISKDLVG 160 (620)
Q Consensus 104 f~i~~~~Y~~~l~~sl~ff~~QRsG~lp~-~~~~~Wr~~s~l~Dg~~~----------------------~~~~~~Dl~G 160 (620)
...++++|.++|+++|+||++||||++|+ .++++||++||++|+... .++.++||+|
T Consensus 33 ~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsG 112 (611)
T 2yik_A 33 SAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSG 112 (611)
T ss_dssp -----CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCC
T ss_pred cccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCCCcccCCC
Confidence 45677899999999999999999999987 789999999999998321 1356899999
Q ss_pred ccccCCCCcccccchHHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHhhc-----ccccccccCcEEEEecCCC
Q 007041 161 GFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKT-----FNHSADSISRMVAQVGAGD 235 (620)
Q Consensus 161 GWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~~~~~~~~dlldeikwg~D~Llkm-----~~~~~~~~g~~y~qVgd~~ 235 (620)
||||||||+||++|+++++++|+|+++||++.|++.++++|||||||||+|||||| +..+ |.||+|||++.
T Consensus 113 GwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~----g~~y~qVgdg~ 188 (611)
T 2yik_A 113 GFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNV----VAFCHQVGDGD 188 (611)
T ss_dssp SBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCE----EEEEEEESCHH
T ss_pred CceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCC----CcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 4444 89999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcceeecC---CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccC
Q 007041 236 TSGGSTTPNDHYCWMRPEDIDYDRPVTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRA 311 (620)
Q Consensus 236 ~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~---~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~ 311 (620)
. ||.||.+||+|+++|++|.++ |++++++++|||||+|||||| .|++||++||++||++|+||++||+
T Consensus 189 ~--------Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~ 260 (611)
T 2yik_A 189 I--------DHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPK 260 (611)
T ss_dssp H--------HTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred c--------cccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6 999999999999999998774 899999999999999999999 9999999999999999999999999
Q ss_pred CcCCCCccccCCCCCCCcchhHHHHHHHHHHHhCChhhHHHhhcCCCCCCCccccCcCCCccccccchhHHHHHHHHHHh
Q 007041 312 RYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLR 391 (620)
Q Consensus 312 ~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~lla~l~ 391 (620)
.|.++.+..+++|+|+++.||++|||+|||+|||+++|+++++.+.. .+. ...+.|+|+++..++++||+++.
T Consensus 261 ~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~-----~~~--~~~~~~~Wd~~~~g~~~lLa~~~ 333 (611)
T 2yik_A 261 GVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYYD-----YYA--PPGWIHCWNDVWSGTACILAEIN 333 (611)
T ss_dssp CCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCC-----TTS--TTTSCSBTTBCHHHHHHHHHHHH
T ss_pred cccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHH-----Hhc--cCCccCccccchHHHHHHHHhcc
Confidence 99877666788999999999999999999999999999999987531 111 12357999999999999998875
Q ss_pred hhcCCCCchHHHHHHHHHHHHHH----------HHhhcCC--CCccccCC-CceeecCCCCChHHHHHHHHHHHHHHhhh
Q 007041 392 LFLSPGYPYEEMLRTFHNQTSIT----------MCSYLPT--FTTWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDY 458 (620)
Q Consensus 392 ~~~~pg~p~~~~~~~~~~~~~~~----------~~~y~~~--~~~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~ 458 (620)
..... . ..++.+.|++.++.. +|..++. .....+|| |+.+.. .||||||++|++||+++|+++
T Consensus 334 ~~~~~-~-~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~--~WGs~~~~~~~afl~~~ya~~ 409 (611)
T 2yik_A 334 DLYDK-D-SQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLN--QWGSARYNTAAQLIALVYDKH 409 (611)
T ss_dssp HHHST-T-SSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSC--STTHHHHHHHHHHHHHHHHHT
T ss_pred ccccc-c-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccC--CCchHHHHHHHHHHHHHHHHh
Confidence 31100 0 112345676665543 2222211 12346789 998755 479999999999999999986
Q ss_pred hhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCCCceEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCC
Q 007041 459 LDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSS 538 (620)
Q Consensus 459 l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~ 538 (620)
+. ...++|+++|++|||||||+||+++|||||||+|+|++||||+++||.+ .+.+
T Consensus 410 ~~-------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~------------~~~p 464 (611)
T 2yik_A 410 HG-------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKD------------ANDS 464 (611)
T ss_dssp TT-------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCSC------------TTCC
T ss_pred cC-------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCccc------------ccCC
Confidence 42 2458999999999999999999999999999999999999999988631 3568
Q ss_pred CCCCCCccceeecCCCCCCCcccccccccccccccccchHHHHHHHHhhcCC
Q 007041 539 KPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEK 590 (620)
Q Consensus 539 ~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~~~ 590 (620)
.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|....
T Consensus 465 ~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~ 516 (611)
T 2yik_A 465 SPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFF 516 (611)
T ss_dssp SCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999999763
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1.3e-106 Score=915.48 Aligned_cols=430 Identities=34% Similarity=0.570 Sum_probs=377.4
Q ss_pred chhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHHHH
Q 007041 108 PDNYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVI 187 (620)
Q Consensus 108 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~ 187 (620)
.++|.++|+++|+||++||||++|+.++++||++||+.||.+. ++||+|||||||||+||++|+|+++++|+|+++
T Consensus 3 ~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~----~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~ 78 (614)
T 1g87_A 3 TYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDV----GVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLY 78 (614)
T ss_dssp CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGG----TSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccc----cccCCCCeeeCCCCcEeccccHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998765 899999999999999999999999999999999
Q ss_pred HhHHHHhhcCChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC--
Q 007041 188 EYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECS-- 265 (620)
Q Consensus 188 e~~~~~~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~-- 265 (620)
||++.|++.++++|||||||||+|||||||+++ +.||+|||++.. ||.||.+||+|+.+|++|.++
T Consensus 79 e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~~~~~r~~y~v~~~ 146 (614)
T 1g87_A 79 EDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTP----GVYYYQVGDGGK--------DHSWWGPAEVMQMERPSFKVDAS 146 (614)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HHTCCSCGGGCCSCCCEEEECSS
T ss_pred HhHHHHhhCCChHHHHHHHHHHHHHHHHhccCC----CcEEEEecCCCc--------CccccCCcccCCCCCcceEecCC
Confidence 999999999999999999999999999998887 999999999865 999999999999999998875
Q ss_pred -CccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHHHHH
Q 007041 266 -SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYA 343 (620)
Q Consensus 266 -~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~a 343 (620)
|+++++|++|||||+|||||| .|++||++||++||++|+||++||+.+. .+..+++|+|+++.||++|||+|||+|
T Consensus 147 ~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~ss~~~DEl~WAAawLy~A 224 (614)
T 1g87_A 147 KPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAG--YTAASGYYSSSSFYDDLSWAAVWLYLA 224 (614)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSCSHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCcCcCCcCCCCchhHHHHHHHHHHHH
Confidence 889999999999999999999 9999999999999999999999999764 334578999999999999999999999
Q ss_pred hCChhhHHHhhcCCCCCCC-ccccCcCCCccccccchhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhhcCCC
Q 007041 344 TGNSSYLQLATTPGLGKHA-GVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTF 422 (620)
Q Consensus 344 TG~~~Yl~~a~~~~~~~~~-~~~~~~~~~~~~~Wd~~~~~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~~~ 422 (620)
||+++|+++++.+...... .........+.|+||+|..++++||+++.. ...|++.++..++.+++..
T Consensus 225 Tgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~-----------~~~~~~~~~~~~~~~~~~~ 293 (614)
T 1g87_A 225 TNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLTN-----------KQLYKDSIEMNLDFWTTGV 293 (614)
T ss_dssp HCCHHHHHHHHHTGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTCB
T ss_pred hCCHHHHHHHHHHHHhhccccccccccccCCcCccchHHHHHHHHHhccC-----------cHHHHHHHHHHHHHhhhcc
Confidence 9999999999875311000 000001123579999999999999998642 1357777777777666432
Q ss_pred --CccccCC-CceeecCCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCCCc
Q 007041 423 --TTWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMS 499 (620)
Q Consensus 423 --~~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~~S 499 (620)
....+|| ||.+... ||||||++|++||+++|++++. |+ ...+++|+++|++|||||||+| ++|
T Consensus 294 ~~~~~~~tp~Gl~~~~~--Wgs~~~~~n~afl~~~y~~~~~--------~~--~~~~~~y~~~A~~qidYiLG~n--~~S 359 (614)
T 1g87_A 294 NGTRVSYTPKGLAWLFQ--WGSLRHATTQAFLAGVYAEWEG--------CT--PSKVSVYKDFLKSQIDYALGST--GRS 359 (614)
T ss_dssp TTBCCEECTTSCEECCS--SSHHHHHHHHHHHHHHHHHSTT--------SC--HHHHHHHHHHHHHHHHHHHTTT--SSC
T ss_pred CCCccccCCCCceeccC--CCcHHHHHHHHHHHHHHHHhhC--------CC--ccCHHHHHHHHHHHHHHhcCCC--Ccc
Confidence 2356799 9988764 6999999999999999999642 43 2358999999999999999998 689
Q ss_pred eEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCCCCCcccccccccccccccccchHH
Q 007041 500 YIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGL 579 (620)
Q Consensus 500 yVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~l 579 (620)
||||||+|+|++||||+++||.. .+.+++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+|
T Consensus 360 yvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~l 429 (614)
T 1g87_A 360 FVVGYGVNPPQHPHHRTAHGSWT----------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGF 429 (614)
T ss_dssp CBTTSSSSCCSCCBCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHH
T ss_pred eEeccCCCCCCCCcchhhccCcc----------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHH
Confidence 99999999999999999988742 13456889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 007041 580 VAALVALSGEK 590 (620)
Q Consensus 580 v~ala~l~~~~ 590 (620)
|++||+|....
T Consensus 430 v~~lA~l~~~~ 440 (614)
T 1g87_A 430 TGALAKMYKHS 440 (614)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999864
No 7
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=9.8e-104 Score=881.14 Aligned_cols=459 Identities=19% Similarity=0.227 Sum_probs=379.6
Q ss_pred CCccccccccccCCCcccceeEeeecceeecCeEEEEEcchhhhHHHhhhheeeeeeccCCCcCCCCCchhHHHHHHHHH
Q 007041 40 RPLDETQQSWLLGPTEKKKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKAL 119 (620)
Q Consensus 40 ~~~~~t~q~w~~~~~~~~~~~~~Dfs~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~i~~~~Y~~~l~~sl 119 (620)
.+++++...| .++++++|||.|++||+|+|.+ +. ..++|.|++++|.++|+++|
T Consensus 43 ~V~~g~~~~~------g~~~~~~DFS~~~~pG~Y~l~~-~~-------------------~S~~F~I~~~~Y~~~l~~sl 96 (537)
T 3gzk_A 43 AVFAGMTKPV------GGNWYVGDFTALRVPGTYTLTV-GT-------------------LEARVVIHRRAYRDVLEAML 96 (537)
T ss_dssp EEEEEECEEE------ETTEEEEECTTCCSCEEEEEEE-TT-------------------EEEEEEEETTTTHHHHHHHH
T ss_pred EEEEEeeecC------CCeEEEEeccCCCCCceEEEEE-cc-------------------ccCCceeCcchHHHHHHHHH
Confidence 4677777777 4568999999999999999986 32 12458999999999999999
Q ss_pred HHHHHhhcCC-CCCCCCCCCCCCCCCCC-CCCCCCCCccccccccccCCCCcccccchHHHHHHHHHHHHHhHHHHh---
Q 007041 120 MFFNAQRSGK-LPKHNNVSWRGNSCLKD-GKSASSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYE--- 194 (620)
Q Consensus 120 ~ff~~QRsG~-lp~~~~~~Wr~~s~l~D-g~~~~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~~--- 194 (620)
+||++||||+ +|+.++++||+++||.| +.......++||+|||||||||+||++|+++++++|+|++++|++.|+
T Consensus 97 ~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L~~a~~~~~~~~~~~~ 176 (537)
T 3gzk_A 97 RFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLLLAHEYFPAALAHVR 176 (537)
T ss_dssp HHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHTCC
T ss_pred HHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 9999999999 89889999999988754 322223468999999999999999999999999999999999999995
Q ss_pred ----hcCC--hhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCcc
Q 007041 195 ----AAGE--LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCS 268 (620)
Q Consensus 195 ----~~~~--~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~s 268 (620)
++++ +||||||||||+|||||||+++. |.+|+|||+..+ +..|.+||+|+.+|+++++++.+
T Consensus 177 ~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~---g~~y~~v~~~~w---------~g~~~~Pe~~~~~R~~~~~~t~~ 244 (537)
T 3gzk_A 177 PMRSVHRAPHLPPALEVAREEIAWLLTMQDPAT---GGVYHKVTTPSF---------PPLDTRPEDDDAPLVLSPISYAA 244 (537)
T ss_dssp CSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTT---CCBBSEEECSSC---------CCTTCCGGGCCSCEEECCBCHHH
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHhcccCCC---CeEEEEecCCCc---------CCCCcCcccCCCcceEeecCCcH
Confidence 3677 99999999999999999998543 899999997532 11248999999999999987543
Q ss_pred chHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcC-CCCccccCCCCCCCcchhHHHHHHHHHHHhCC
Q 007041 269 DLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYS-AGSAEAAKFYNSTSYWDEFIWGGAWLYYATGN 346 (620)
Q Consensus 269 dla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~-~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~ 346 (620)
+|++|||||+|||||| +|++||++||++||++|+||++||+.+. ++.+...++|+|+++.||++|||+|||+|||+
T Consensus 245 --~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd 322 (537)
T 3gzk_A 245 --TATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGD 322 (537)
T ss_dssp --HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCC
Confidence 7899999999999999 8999999999999999999999999864 34445578999999999999999999999999
Q ss_pred hhhHHHhhcCCCCCCCccccCcCCCccccccchhHHHHH--HHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhhcCCCCc
Q 007041 347 SSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAAL--LLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTT 424 (620)
Q Consensus 347 ~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~--lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~~~~~ 424 (620)
.+|+++++++.. . .+ .+.|+||+|..++++ ||+++.. .++ ...+++++.+++.++.++ +.
T Consensus 323 ~~Yl~~a~~~~~---~-~~-----~~~~~Wd~~~~~~~~~ll~~~~~~-~~~-~~~~~~~~~~~~~ad~~~-~~------ 384 (537)
T 3gzk_A 323 SAWARVCEPLLD---L-DL-----PWELGWADVALYGVMDYLRTPRAA-VSD-DVRNKVKSRLLRELDALA-AM------ 384 (537)
T ss_dssp GGGHHHHHHHHH---S-CC-----CCCCSSSCCHHHHHHHHHTSCGGG-SCH-HHHHHHHHHHHHHHHHHH-HH------
T ss_pred HHHHHHHHHhhh---c-cC-----CCccchHHhHHHHHHHHHhCcccc-CCH-HHHHHHHHHHHHHHHHHH-Hh------
Confidence 999999987531 0 11 247999999988775 3333211 010 012344555555555442 22
Q ss_pred cccCC-Cceeec-CCCCChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHH-HhccccccccCCCCCceE
Q 007041 425 WNRTR-GLIQLN-HGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFA-KTQIDYILGKNPRKMSYI 501 (620)
Q Consensus 425 ~~~tp-Gl~~~~-~~~wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A-~~qidYiLG~NP~~~SyV 501 (620)
...+| |+.+.+ ...||||++++|.+|++++++++ +++.+|+++| ++|||||||+||+++|||
T Consensus 385 ~~~~~~g~~~~~~~~~WGsn~~~~n~a~~l~~a~~~---------------~~~~~y~~~aa~~qidYiLG~NP~~~SyV 449 (537)
T 3gzk_A 385 AESHPFGIPMRDDDFIWGSNMVLLNRAMAFLLAEGV---------------GVLHPAAHTVAQRAADYLFGANPLGQCYV 449 (537)
T ss_dssp HHHSTTCCSCCGGGCCTTHHHHHHHHHHHHHHHGGG---------------TCCCTTHHHHHHHHHHHHBTCSTTCCBCB
T ss_pred ccCCCCceeecCCCCcccchHHHHHHHHHHHHHhhc---------------cCCHHHHHHHHHHhHHHhcCCCCCCceeE
Confidence 24577 887765 23689999999999999888873 3456899999 999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccceeecCCCCC----------------CCccccccc
Q 007041 502 VGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKH----------------DGFRDVRTN 565 (620)
Q Consensus 502 vG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~~----------------d~y~D~r~~ 565 (620)
||||+|+|++||||+++++ .+++++||+||||||.. |+|.|+|.+
T Consensus 450 vG~G~~~p~~pHHR~s~~~-------------------~~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D~~~~ 510 (537)
T 3gzk_A 450 TGFGQRPVRHPHHRPSVAD-------------------DVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDS 510 (537)
T ss_dssp BTCSSSCBCSCBCHHHHHH-------------------CTTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCCCTTC
T ss_pred ecCCCCCCCCCcchhhhcC-------------------CCCCCCCCCCccCCCcccccchhhhcccCCCcccCcCCCCcc
Confidence 9999999999999987642 13468999999999987 899999999
Q ss_pred ccccccccccchHHHHHHHHhhcCC
Q 007041 566 YNYTEPTLAGNAGLVAALVALSGEK 590 (620)
Q Consensus 566 y~~NEvaId~NA~lv~ala~l~~~~ 590 (620)
|++||||||||||||++||+|.+..
T Consensus 511 y~~nEvai~~NA~lv~~lA~l~~~~ 535 (537)
T 3gzk_A 511 YSTNEVAVYWNSPAVFVIAALLEAR 535 (537)
T ss_dssp HHHHBCCHHHHHHHHHHHHHHHSCC
T ss_pred ccccccchHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998764
No 8
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=1.8e-102 Score=886.62 Aligned_cols=453 Identities=18% Similarity=0.236 Sum_probs=379.3
Q ss_pred cceeEeeecceeecCeEEEEEcchhhhHHHhhhheeeeeeccCCCcCCCCCchhHHHHHHHHHHHHHHhhcC-CCCCCCC
Q 007041 57 KKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKALMFFNAQRSG-KLPKHNN 135 (620)
Q Consensus 57 ~~~~~~Dfs~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~i~~~~Y~~~l~~sl~ff~~QRsG-~lp~~~~ 135 (620)
++++.+|||.|++||+|+|.+.+. . ..++|.|++++|.++|+++|+||++|||| .||+.++
T Consensus 93 ~~~~~~DFS~~~~~G~Y~l~~~~~--------------~----~S~~F~I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~ 154 (639)
T 1clc_A 93 ETVYIADFSSVNEEGTYYLAVPGV--------------G----KSVNFKIAMNVYEDAFKTAMLGMYLLRCGTSVSATYN 154 (639)
T ss_dssp EEEEEEECTTCCSCEEEEEEETTT--------------E----ECCCEEECTTTTHHHHHHHHHHHHHTBCSSCEEEEET
T ss_pred CcEEEEEecccCCCceEEEEECCc--------------c----ccCCeeechhhhhHHHHHHHHHHHHhcCCCcCccccc
Confidence 778999999999999999987652 1 23468999999999999999999999999 6999899
Q ss_pred CC-CCCCCCCCCCCCC----CCCCccccccccccCCCCcccccchHHHHHHHHHHHHHhHHHHhh--------cCChhHH
Q 007041 136 VS-WRGNSCLKDGKSA----SSSISKDLVGGFYDAGDAIKFNFPQSFTITMLSWSVIEYSAKYEA--------AGELNHV 202 (620)
Q Consensus 136 ~~-Wr~~s~l~Dg~~~----~~~~~~Dl~GGWyDAGD~~Ky~~~~a~s~~~L~w~~~e~~~~~~~--------~~~~~dl 202 (620)
++ ||+++||.|+... .++.++||+|||||||||+||++|+++++++|+|+++||++.|++ +|+++|+
T Consensus 155 ~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ 234 (639)
T 1clc_A 155 GIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDF 234 (639)
T ss_dssp TEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHH
T ss_pred cCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHHHHHHHHHHHHhhhhhhccccCCccCCCcHHHH
Confidence 98 9999999887432 145699999999999999999999999999999999999999986 8999999
Q ss_pred HHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHHHHHh
Q 007041 203 KEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAAS 282 (620)
Q Consensus 203 ldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAlAaAs 282 (620)
|||||||+|||||||.++.. |.||+|||+..+ ||. .+||+|+.+|+++++ ++++++++|||||+||
T Consensus 235 ldeikwg~Dyllk~q~~~~~--g~~y~~vgd~~~--------~~~--~~Pe~~~~~R~~~~~--~s~~a~e~AAAlAaAS 300 (639)
T 1clc_A 235 LDELKYEIDWILTMQYPDGS--GRVAHKVSTRNF--------GGF--IMPENEHDERFFVPW--SSAATADFVAMTAMAA 300 (639)
T ss_dssp HHHHHHHHHHHHTTBCTTSS--CCBEEEEECSSC--------CCS--CCGGGCCSCCEEEEE--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCC--CeEEEEecCCCC--------CCC--CCchhcCCCceEecC--CcHHHHHHHHHHHHHH
Confidence 99999999999999875411 689999999866 664 899999999999985 5778999999999999
Q ss_pred cccc-CcHHHHHHHHHHHHHHHHHHHcccCC-cCCCCccccCCCCCCCcchhHHHHHHHHHHHhCChhhHHHhhcCCCCC
Q 007041 283 IVFK-DNKAYSQKLVHGAKTLFQFSRQQRAR-YSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGK 360 (620)
Q Consensus 283 ~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~-y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl~~a~~~~~~~ 360 (620)
|||| .|++||++||++||++|+||++||+. |.+.....+++|+|++|.||++|||+|||+|||+++|+++++.++
T Consensus 301 ~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~--- 377 (639)
T 1clc_A 301 RIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDEEYLRDFENRA--- 377 (639)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHH---
T ss_pred HhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchHHHHHHHHHHHHhCCHHHHHHHHHHH---
Confidence 9999 89999999999999999999999998 555555567899999999999999999999999999999998753
Q ss_pred CCccccCcCCCccccccchhHHHHHHHH-HHhhhcCCCCchHHHHHHHHHHHHHHHHhhcCCCCccccCC-CceeecCCC
Q 007041 361 HAGVFWGILDNSVLSWDNKLAGAALLLS-RLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTR-GLIQLNHGN 438 (620)
Q Consensus 361 ~~~~~~~~~~~~~~~Wd~~~~~a~~lla-~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~~~~~~~~tp-Gl~~~~~~~ 438 (620)
..+.. .....|+|++|..+++++|+ +......+. -.+++++.+++.++.+++. ...+| |+.+....+
T Consensus 378 --~~~~~-~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~-------~~~~~~g~~~~~~~~ 446 (639)
T 1clc_A 378 --AQFSK-KIEADFDWDNVANLGMFTYLLSERPGKNPA-LVQSIKDSLLSTADSIVRT-------SQNHGYGRTLGTTYY 446 (639)
T ss_dssp --HTCSS-SCCSSCCTTCCHHHHHHHHHHCCCSCCCHH-HHHHHHHHHHHHHHHHHHH-------HHTSTTCCTTTTCCC
T ss_pred --Hhhcc-ccCCCCCchhhHHHHHHHHHhhhhhccChH-HHHHHHHHHHHHHHHHHHh-------ccCCCCCcccCCCCC
Confidence 11110 11223599999998888877 322111110 0234455565555555543 24567 765422336
Q ss_pred CChHHHHHHHHHHHHHHhhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCCCceEeecCCCCCCCCCCCCCC
Q 007041 439 PQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGAS 518 (620)
Q Consensus 439 wgs~~~a~n~afl~~l~ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~ss 518 (620)
||||++++|.||+++++.++ +++++|+++|++|||||||+||+++|||||||+|+|++||||.++
T Consensus 447 WGsn~~~~~~a~~~~~a~~l---------------~~~~~~~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~ 511 (639)
T 1clc_A 447 WGCNGTVVRQTMILQVANKI---------------SPNNDYVNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSG 511 (639)
T ss_dssp TTHHHHHHHTHHHHHHHHHH---------------SCCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHH
T ss_pred CchHHHHHHHHHHHHHHHhc---------------CCHHHHHHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhc
Confidence 89999999999998887652 467899999999999999999999999999999999999999764
Q ss_pred CCCcccccccCCCccccCCCCCCCCCccceeecCCCC-CCCcccccccccccccccccchHHHHHHHHhhcC
Q 007041 519 IPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDK-HDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGE 589 (620)
Q Consensus 519 ~p~~~~~~~c~~G~~~~~~~~pn~~~l~GaLVGGPn~-~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~~ 589 (620)
++ | .|++++|+||||||. .|+|.|+|.+|++|||+|+|||+||++|+++...
T Consensus 512 ~~----------~---------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~~nA~~v~~la~~~~~ 564 (639)
T 1clc_A 512 AD----------G---------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAINWNAALIYALAGFVNY 564 (639)
T ss_dssp HS----------S---------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHHHHHHHHHHHHTTTTC
T ss_pred cC----------C---------CCCCCCeeeecCCCccccccccCcccceeccccccchHHHHHHHHHhhhc
Confidence 31 1 236799999999999 9999999999999999999999999999998764
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=5.5e-100 Score=863.13 Aligned_cols=497 Identities=18% Similarity=0.199 Sum_probs=391.5
Q ss_pred CCccccccccccCCCcccceeEeeecceeecCe-EEEEEcchhhhHHHhhhheeeeeeccCCCcCCCCCchhHHHHHHHH
Q 007041 40 RPLDETQQSWLLGPTEKKKKKYVDLGCIIVSRK-IFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNYTLALHKA 118 (620)
Q Consensus 40 ~~~~~t~q~w~~~~~~~~~~~~~Dfs~v~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~i~~~~Y~~~l~~s 118 (620)
.+++++...|..-....++++.+|||.|++||+ |+|.+.+... ..-+.++|.|++++|.++|+++
T Consensus 43 ~V~~g~~~~~~~~~~s~~~~~~~DFS~~~~pG~~Y~l~~~~~~~--------------g~~~S~~F~I~~~~Y~~~l~~s 108 (609)
T 1ut9_A 43 VVLEGYTEPKGLDKDSQDYVHWLDFSDFATEGIGYYFELPTVNS--------------PTNYSHPFDIRKDIYTQMKYDA 108 (609)
T ss_dssp EEEEEECEEEEEETTTTEEEEEEECTTCCCCEEEEEEECTTCCS--------------TTCBBCCEEECTTTTTTHHHHH
T ss_pred EEEEEeccCcccccCCCCeEEEEEccCccCCCCeEEEEECcccC--------------CCccccceEeCHHHHHHHHHHH
Confidence 466777766543222337889999999999999 8887642100 0012346999999999999999
Q ss_pred HHHHHHhhcCC---CCCCCCCCCCCCCCCCC-----C-CC-------------CCCCCccccccccccCCCCcccccchH
Q 007041 119 LMFFNAQRSGK---LPKHNNVSWRGNSCLKD-----G-KS-------------ASSSISKDLVGGFYDAGDAIKFNFPQS 176 (620)
Q Consensus 119 l~ff~~QRsG~---lp~~~~~~Wr~~s~l~D-----g-~~-------------~~~~~~~Dl~GGWyDAGD~~Ky~~~~a 176 (620)
|+||++||||. +|...+++|||++||.+ | .+ ...+.++||+|||||||||+||++|++
T Consensus 109 l~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a 188 (609)
T 1ut9_A 109 LAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYDAGDHGKYVVNGG 188 (609)
T ss_dssp HHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBCCSSSSCEEHHHHH
T ss_pred HHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCeeeCCCCCeecCchH
Confidence 99999999996 56666778998888765 0 01 012458999999999999999999999
Q ss_pred HHHHHHHHHHHHhHH-------HH--------hhcCChhHHHHHHHHHHHHHhhcccccccccC---cEEEEecCCCCCC
Q 007041 177 FTITMLSWSVIEYSA-------KY--------EAAGELNHVKEIIKWGTDYFLKTFNHSADSIS---RMVAQVGAGDTSG 238 (620)
Q Consensus 177 ~s~~~L~w~~~e~~~-------~~--------~~~~~~~dlldeikwg~D~Llkm~~~~~~~~g---~~y~qVgd~~~~~ 238 (620)
+++++|++.|+.++. .| +++|+++|||||||||+|||||||.++ + .+|.||+++..
T Consensus 189 ~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~----g~~~~~~g~v~~~~~-- 262 (609)
T 1ut9_A 189 IAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTE----KEDPSIAGMVHHKIH-- 262 (609)
T ss_dssp HHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCT----TTCGGGTTCEECEEE--
T ss_pred HHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCC----CCcceEEEEecCCCC--
Confidence 999888888887763 23 456889999999999999999999887 4 67788887654
Q ss_pred CCCCCCCCCCC---CCCCCCCCCcceeecCCccchHHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHHHHHcccCCcC
Q 007041 239 GSTTPNDHYCW---MRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYS 314 (620)
Q Consensus 239 g~~~~~DH~~W---~~Pe~~~~~R~v~~~~~~sdla~~~AAAlAaAs~vfk-~d~~yA~~lL~~A~~~y~~a~~~~~~y~ 314 (620)
||.+| .+||+|+++|++. .+++++++++|||||+|||||| .|++||++||++||++|+||++||+.|.
T Consensus 263 ------D~~w~g~~~~Pe~~~~~R~~~--~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~~~y~ 334 (609)
T 1ut9_A 263 ------DFRWTALGMLPHEDPQPRYLR--PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYA 334 (609)
T ss_dssp ------ESSCCCSSCCGGGCCSBEEEC--CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCTTCCB
T ss_pred ------CcccCCCCCChhhCCCceeec--CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 88666 5899999999874 3778889999999999999999 8999999999999999999999999997
Q ss_pred CCCc----cccCCCCCCCcchhHHHHHHHHHHHhCChhhHHHhhcCCCCCC-Ccccc-----C---cCCCccccccchhH
Q 007041 315 AGSA----EAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKH-AGVFW-----G---ILDNSVLSWDNKLA 381 (620)
Q Consensus 315 ~~~~----~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl~~a~~~~~~~~-~~~~~-----~---~~~~~~~~Wd~~~~ 381 (620)
+..+ ..+++|+|++|.||++|||+|||+|||+++|+++++.+..... ...+. . ......|+||+|..
T Consensus 335 ~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~~~ 414 (609)
T 1ut9_A 335 EYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTTQG 414 (609)
T ss_dssp CCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCCHH
T ss_pred ccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhhHH
Confidence 6532 3467999999999999999999999999999999987642100 00111 0 11234799999999
Q ss_pred HHHHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHhhcCCC-----CccccCC-CceeecCCCCChHHHHHHHHHHHHHH
Q 007041 382 GAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTF-----TTWNRTR-GLIQLNHGNPQPLQYVVNAAFLATLF 455 (620)
Q Consensus 382 ~a~~lla~l~~~~~pg~p~~~~~~~~~~~~~~~~~~y~~~~-----~~~~~tp-Gl~~~~~~~wgs~~~a~n~afl~~l~ 455 (620)
+++++|+.++.... +-..+++++.++..++.++|...+.. ....+|| |+ .||||+|++|++|+++++
T Consensus 415 ~~~~lla~~~~~l~-~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~------~WGs~~~~~n~a~~~~~a 487 (609)
T 1ut9_A 415 LGTITLALVENGLP-ATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGY------PWGSNSFILNQMIVMGYA 487 (609)
T ss_dssp HHHHHHHHSCCSSC-HHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSC------CTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccc-hhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCc------ccccCHHHHHHHHHHHHH
Confidence 99999986532111 00012445667777777777654321 1123456 55 579999999999998888
Q ss_pred hhhhhccCCCCccCCCCcCChHHHHHHHHhccccccccCCCCCceEeecCCCCCCCCCCCCCCCCCc----ccccccCCC
Q 007041 456 SDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKN----KIRYNCKGG 531 (620)
Q Consensus 456 ad~l~~~~~~g~~c~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~ss~p~~----~~~~~c~~G 531 (620)
.++ ++..+|+++|++|||||||+||+++|||||||+|+|++||||+++.+.+ ..+.+|..|
T Consensus 488 ~~~---------------~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~G 552 (609)
T 1ut9_A 488 YDF---------------TGDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISG 552 (609)
T ss_dssp HHH---------------HCCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCC
T ss_pred HHh---------------cChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCC
Confidence 774 3568999999999999999999999999999999999999998654321 134677655
Q ss_pred ccccCCCCCCCCCccceeecCCCCCCCcccccccccccccccccchHHHHHHHHhhcC
Q 007041 532 WKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGE 589 (620)
Q Consensus 532 ~~~~~~~~pn~~~l~GaLVGGPn~~d~y~D~r~~y~~NEvaId~NA~lv~ala~l~~~ 589 (620)
. -++..+||++ .|++||||+..|+|.|+|.+|++|||||||||+||++||+|...
T Consensus 553 g--p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 553 G--PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp C--CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred C--CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 3 3445566766 89999999999999999999999999999999999999999753
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.5e-72 Score=626.05 Aligned_cols=458 Identities=17% Similarity=0.188 Sum_probs=320.2
Q ss_pred CCcccccccccc-CCCcccceeEeeecceeecCeEEEEEcchhhhHHHhhhheeeeeeccCCCcCCCCCchhH-HHHHHH
Q 007041 40 RPLDETQQSWLL-GPTEKKKKKYVDLGCIIVSRKIFVWTVGTLLVSALLAGFITLIVKTVPRHHHSHARPDNY-TLALHK 117 (620)
Q Consensus 40 ~~~~~t~q~w~~-~~~~~~~~~~~Dfs~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~i~~~~Y-~~~l~~ 117 (620)
.+++++...+-. .+-..++++.+|||.|++||+|+|.+.+. + .++|.|++++| ..+|++
T Consensus 43 ~V~~G~~~~~g~~~~~s~~~~~~~DFS~~~~pG~Y~L~v~g~---------------~----S~pF~I~~~vy~~~~l~~ 103 (586)
T 3h7l_A 43 TVATFAVEEQGKVANWHQGYFYLIDFSSFTDSGDYFLQVEDS---------------R----SSTFTVGEHILLNQTLSD 103 (586)
T ss_dssp EEEEEEEEEEECCTTCTTCEEEEEECTTCCCCEEEEEEETTE---------------E----CCCEEEETTHHHHHHHHH
T ss_pred EEEEEeecCCccccccCCCcEEEEEccCCCCCceEEEEECCc---------------e----eCCeEEccchhhHHHHHH
Confidence 467777777632 11223789999999999999999987662 2 34699999997 899999
Q ss_pred HHHHHHHhhcCCC--CCCCCCCCCCCCCCCCCCCCCCCCccccccccccC-CCCcccccchHHHH-------HHHHHHHH
Q 007041 118 ALMFFNAQRSGKL--PKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDA-GDAIKFNFPQSFTI-------TMLSWSVI 187 (620)
Q Consensus 118 sl~ff~~QRsG~l--p~~~~~~Wr~~s~l~Dg~~~~~~~~~Dl~GGWyDA-GD~~Ky~~~~a~s~-------~~L~w~~~ 187 (620)
+|+||++||||++ +.+.+++|++. +.++||+|||||| |||+||++|+|||+ ++|+|+++
T Consensus 104 sl~ff~~QRsG~~~~~~d~~~~~~~~-----------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ~~~~~w~ll 172 (586)
T 3h7l_A 104 VIHYFKSQRCGGVFDQQDRQVPVLNA-----------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQTPMVVWNIL 172 (586)
T ss_dssp HHHHHHHTBCCHHHHHHTTSEEETTT-----------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCceeeecCC-----------CceeecccccccCCCCcceeccchhhhhhcccchhhHHHHHHH
Confidence 9999999999974 55677888863 2278999999999 99999999999998 69999999
Q ss_pred HhHHHHhhcC-----ChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCC--CCCCCCCCCCcc
Q 007041 188 EYSAKYEAAG-----ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYC--WMRPEDIDYDRP 260 (620)
Q Consensus 188 e~~~~~~~~~-----~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~--W~~Pe~~~~~R~ 260 (620)
++.+.+.... +++|||||||||+|||||||+++ |.||+||||. +. +.+ .+... ...|+.++.+|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~----g~~y~qVgd~-W~-~d~--~~R~~~~~~~~~~~~~~~y 244 (586)
T 3h7l_A 173 KGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEK----GFFYMTVFDK-WS-KDT--AQREICAYETQLGHKFDDY 244 (586)
T ss_dssp HHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTT----SCBBCEEECT-TC-CCG--GGCEEEEEETTTTEEESCC
T ss_pred HHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCC----CeEEEEecCC-CC-CCC--CccccccccCCCCCCCcce
Confidence 8888876533 38999999999999999999988 9999999986 21 000 00000 122333222333
Q ss_pred eeecCCccchHHHHHHHHHHHhccccCcHHH-HHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhH--HHHH
Q 007041 261 VTECSSCSDLAAEMAASLAAASIVFKDNKAY-SQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEF--IWGG 337 (620)
Q Consensus 261 v~~~~~~sdla~~~AAAlAaAs~vfk~d~~y-A~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~--~wAA 337 (620)
....+++ +|++|||||+|||||+ |++| +++||++|+++|+|+++|+.+|.+. +++++.||+ +|||
T Consensus 245 ~~~~~~~---agl~aAALA~Asrvf~-d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--------g~~~~~De~~~~WAA 312 (586)
T 3h7l_A 245 QAGFRQG---GGVAIAALAAASRLGV-HGEYDQQKYRNAAENGYWHLKEHNTQYLND--------GEENIIDEYCALLAS 312 (586)
T ss_dssp BCCGGGT---HHHHHHHHHHHTTSSS-CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--------SCCCHHHHHHHHHHH
T ss_pred ecCCCCc---HHHHHHHHHHHhcccC-CCCcChHHHHHHHHHHHHHHHhcCccccCC--------CCccchhHHHHHHHH
Confidence 3332234 7789999999999998 8889 9999999999999999999877543 246889999 9999
Q ss_pred HHHHHHhCChhhHHHhhcCCCCCCCccccCcCCCccccccc------------hhHHHHHHHHHHhhhcCCCCchHHHHH
Q 007041 338 AWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDN------------KLAGAALLLSRLRLFLSPGYPYEEMLR 405 (620)
Q Consensus 338 aeLy~aTG~~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~Wd~------------~~~~a~~lla~l~~~~~pg~p~~~~~~ 405 (620)
+|||+|||+.+||++++..... -...|... ....|.|.. ....+.+.|+++.......--.+.+.+
T Consensus 313 ~eLy~ATgd~~YL~~a~~~a~~-l~~~~~~~-~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~ 390 (586)
T 3h7l_A 313 VELFKATKETRYLEESRLWAQR-LVARQMSD-EQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKC 390 (586)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHH-HHTTEECC-SSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH-HHHhccCC-ccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHH
Confidence 9999999999999999863200 00011111 123466763 333333434443322221101223333
Q ss_pred HHHHHHHH--HHHh-----------hcCCCCccccCC-Cceeec--CCCC-ChHHHHHHHHHHHHHHhhhhhccCCCCcc
Q 007041 406 TFHNQTSI--TMCS-----------YLPTFTTWNRTR-GLIQLN--HGNP-QPLQYVVNAAFLATLFSDYLDAADTPGWY 468 (620)
Q Consensus 406 ~~~~~~~~--~~~~-----------y~~~~~~~~~tp-Gl~~~~--~~~w-gs~~~a~n~afl~~l~ad~l~~~~~~g~~ 468 (620)
.+++.++. .++. |+.......+++ ++++.+ .++| |||++++|.|++++++++++..
T Consensus 391 ~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~------- 463 (586)
T 3h7l_A 391 IVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIAS------- 463 (586)
T ss_dssp HHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCC-------
T ss_pred HHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCC-------
Confidence 33333331 1111 111111223344 555544 2489 9999999999999999885320
Q ss_pred CCCCcCChHHHHHHHHhccccccccCCCCCceEeecCCCCCCCCCCCCCCCCCcccccccCCCccccCCCCCCCCCccce
Q 007041 469 CGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGA 548 (620)
Q Consensus 469 c~~~~~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~ss~p~~~~~~~c~~G~~~~~~~~pn~~~l~Ga 548 (620)
-....+|+++|++|||||||+||+++|||||||+|+|+ ||.+. ++ + .+||.
T Consensus 464 ----~~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~------------~~-------~---~~pG~ 514 (586)
T 3h7l_A 464 ----QEIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY------------GF-------F---NAKGG 514 (586)
T ss_dssp ----HHHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG------------TB-------C---CCTTC
T ss_pred ----chhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc------------CC-------C---CCCcc
Confidence 00138999999999999999999999999999999876 78642 11 2 28999
Q ss_pred eecCCCCC--C----------CcccccccccccccccccchHHHHHHHH
Q 007041 549 LVAGPDKH--D----------GFRDVRTNYNYTEPTLAGNAGLVAALVA 585 (620)
Q Consensus 549 LVGGPn~~--d----------~y~D~r~~y~~NEvaId~NA~lv~ala~ 585 (620)
||||||.. | +..|.-.+|.-+|--|==-|=+..+++.
T Consensus 515 i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 515 VCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp BBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 99999864 1 2335567898889877655544444443
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=94.44 E-value=0.071 Score=56.08 Aligned_cols=141 Identities=6% Similarity=-0.002 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHhhc-ccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 007041 176 SFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKT-FNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPED 254 (620)
Q Consensus 176 a~s~~~L~w~~~e~~~~~~~~~~~~dlldeikwg~D~Llkm-~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~ 254 (620)
.+....++|++.+ .|...-+-+..++.++-+++||++- ++++ |++|+.+... +.|.+
T Consensus 52 l~~nar~i~~~a~---a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~----Gg~~~~~d~d---------------g~~~~ 109 (388)
T 2gz6_A 52 IWLQNRQVWTFSM---LCNQLEKRENWLKIARNGAKFLAQHGRDDE----GNWYFALTRG---------------GEPLV 109 (388)
T ss_dssp HHHHHHHHHHHHH---HHHHTCCCHHHHHHHHHHHHHHHHHSBCTT----SCBCSEECTT---------------SCBCC
T ss_pred HHHHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHhcCCCC----CCEEEEEcCC---------------CCccc
Confidence 3555666665544 2222124588999999999999995 5555 8888877311 11221
Q ss_pred CCCCcceeecCCccchHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHccc----CCcCCCCccccCCCCCCCcc
Q 007041 255 IDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQR----ARYSAGSAEAAKFYNSTSYW 330 (620)
Q Consensus 255 ~~~~R~v~~~~~~sdla~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~----~~y~~~~~~~~~~Y~s~~~~ 330 (620)
. .+.++ + -|-++.||+.++++.. ++ ++|+.|++++++..++- +.+....+... .+. +..
T Consensus 110 ~--~~~~~------~-~af~i~al~~~y~~tg-~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~-~~~--~~~ 172 (388)
T 2gz6_A 110 Q--PYNIF------S-DCFAAMAFSQYALASG-EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTR-PMK--ALA 172 (388)
T ss_dssp C--CCCHH------H-HHHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHTC--------------CC-CCE--ETH
T ss_pred C--CcchH------H-HHHHHHHHHHHHHHhC-CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCCCC-CCC--CCC
Confidence 1 12222 1 3467778888888875 65 45777888888777642 11111111000 111 112
Q ss_pred h--hHHHHHHHHHHHhCChhhHHHhhc
Q 007041 331 D--EFIWGGAWLYYATGNSSYLQLATT 355 (620)
Q Consensus 331 D--E~~wAAaeLy~aTG~~~Yl~~a~~ 355 (620)
+ -++.|.+.||++|++..|++.+..
T Consensus 173 ~~~~~~~all~l~~~t~d~~~~~~A~~ 199 (388)
T 2gz6_A 173 VPMILANLTLEMEWLLPQETLENVLAA 199 (388)
T ss_dssp HHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 2 346678999999999999987764
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=93.68 E-value=0.87 Score=47.62 Aligned_cols=80 Identities=9% Similarity=0.012 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcc-ccCcHHHHHHHHHHHHHHHHHHHcc----cCCcCCCC-ccccCCCCCCCcchh--HHHHHHHHHH
Q 007041 271 AAEMAASLAAASIV-FKDNKAYSQKLVHGAKTLFQFSRQQ----RARYSAGS-AEAAKFYNSTSYWDE--FIWGGAWLYY 342 (620)
Q Consensus 271 a~~~AAAlAaAs~v-fk~d~~yA~~lL~~A~~~y~~a~~~----~~~y~~~~-~~~~~~Y~s~~~~DE--~~wAAaeLy~ 342 (620)
-|.++.++|.|+++ ++ ++ .+++.|+++.+|..++ .+.+.... .++...-......|. +++|.+++|+
T Consensus 55 nar~i~~~a~a~~~~~~-~~----~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~ 129 (388)
T 2gz6_A 55 QNRQVWTFSMLCNQLEK-RE----NWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYAL 129 (388)
T ss_dssp HHHHHHHHHHHHHHTCC-CH----HHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-CH----HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHH
Confidence 56999999999999 66 55 4678888889998875 12221100 010000001111122 3568889999
Q ss_pred HhCChhhHHHhhc
Q 007041 343 ATGNSSYLQLATT 355 (620)
Q Consensus 343 aTG~~~Yl~~a~~ 355 (620)
+||+..|++.|.+
T Consensus 130 ~tg~~~~l~~A~~ 142 (388)
T 2gz6_A 130 ASGEEWAKDVAMQ 142 (388)
T ss_dssp HHCCHHHHHHHHH
T ss_pred HhCCHHHHHHHHH
Confidence 9999999998765
No 13
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.26 E-value=0.41 Score=50.92 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=65.7
Q ss_pred ChhHHHHHHHHHHHHHhh-cccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHH
Q 007041 198 ELNHVKEIIKWGTDYFLK-TFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAA 276 (620)
Q Consensus 198 ~~~dlldeikwg~D~Llk-m~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AA 276 (620)
+.+..++.++-+++||++ |.+++. |++|..+-++ .|.+. ++.+| +. |-++-
T Consensus 69 g~~~~l~~A~~~~~fl~~~~~d~~~---Gg~~~~~~dG----------------~~~~~--~~~ly------d~-Af~i~ 120 (402)
T 3gt5_A 69 GTAEYLDAVHHGLSYVRDVHRNPAT---GGYAWTLCDD----------------RVEDD--TNHCY------GL-AFVML 120 (402)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCTTT---SCBCSEEETT----------------EEEEC--CEEHH------HH-HHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCccCCC---CcEEEEeeCC----------------CCCcC--CcchH------HH-HHHHH
Confidence 568999999999999998 444332 5677666222 12100 12222 11 12333
Q ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHcc---c--CCcCCC-Cccc-cCCCCCCCcchh--HHHHHHHHHHHhCCh
Q 007041 277 SLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ---R--ARYSAG-SAEA-AKFYNSTSYWDE--FIWGGAWLYYATGNS 347 (620)
Q Consensus 277 AlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~---~--~~y~~~-~~~~-~~~Y~s~~~~DE--~~wAAaeLy~aTG~~ 347 (620)
||+.+.+. .+++ +|+.|+++++...++ + +-|... .+.. ...|. +..+- ++-|.+.||++||+.
T Consensus 121 al~~~~~t--gd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~--~~n~~m~l~eall~L~~~tgd~ 192 (402)
T 3gt5_A 121 AYSCGLKV--GIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYR--GQNANMHMCEAMLAAYEASGEQ 192 (402)
T ss_dssp HHHHHHHT--TCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCE--EHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHh--CChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCC--CCCHHHHHHHHHHHHHHhhCCH
Confidence 33332221 3553 566777777777764 1 222210 0000 01111 12222 455789999999999
Q ss_pred hhHHHhhc
Q 007041 348 SYLQLATT 355 (620)
Q Consensus 348 ~Yl~~a~~ 355 (620)
.|++.+..
T Consensus 193 ~~~~~a~~ 200 (402)
T 3gt5_A 193 RYLERALV 200 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 14
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=92.76 E-value=1 Score=47.16 Aligned_cols=123 Identities=11% Similarity=-0.014 Sum_probs=73.5
Q ss_pred ChhHHHHHHHHHHHHH-hhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHH
Q 007041 198 ELNHVKEIIKWGTDYF-LKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAA 276 (620)
Q Consensus 198 ~~~dlldeikwg~D~L-lkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AA 276 (620)
+-+..|+.++--.++| .+-+++. ..|+|+-++ + +..++. ..+ -+.++.
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~--~gGGi~W~~--------------------~------~~~~kn-ais--N~~~~~ 157 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDI--MGGGFAWRR--------------------P------QMYYKN-TPV--NAPFII 157 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSG--GGSCBEEET--------------------T------EEEEEE-HHH--HHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCC--CCCceEecC--------------------C------Cccccc-hhh--HHHHHH
Confidence 4578899999999999 5555432 014443332 1 112222 222 446777
Q ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHcc---c-CCcCCCCccccCCCCC--CCcc---hhHHHHHHHHHHHhCCh
Q 007041 277 SLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ---R-ARYSAGSAEAAKFYNS--TSYW---DEFIWGGAWLYYATGNS 347 (620)
Q Consensus 277 AlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~---~-~~y~~~~~~~~~~Y~s--~~~~---DE~~wAAaeLy~aTG~~ 347 (620)
++|..++++. |+ ++++.|+++|+|.+++ + +.+.++......-+.+ ..|. --++.|+++||++||++
T Consensus 158 ~la~l~~~tg-d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~ 232 (349)
T 3k7x_A 158 LSCWLYNELN-ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEA 232 (349)
T ss_dssp HHHHHHHHHC-CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHhC-CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcH
Confidence 7777778776 65 5788999999999873 1 2222221100000111 1111 14789999999999999
Q ss_pred hhHHHhhcC
Q 007041 348 SYLQLATTP 356 (620)
Q Consensus 348 ~Yl~~a~~~ 356 (620)
+||+.+...
T Consensus 233 ~yl~~a~~l 241 (349)
T 3k7x_A 233 IYLDTANKT 241 (349)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=92.67 E-value=0.32 Score=51.05 Aligned_cols=66 Identities=23% Similarity=0.361 Sum_probs=45.2
Q ss_pred HHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHH---HHHHHHHHhCChhhH
Q 007041 274 MAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIW---GGAWLYYATGNSSYL 350 (620)
Q Consensus 274 ~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~w---AAaeLy~aTG~~~Yl 350 (620)
+..+|.-++++.. |++ +++.|+++..+.......+. -.++.||..| |.+.+|++||+++||
T Consensus 51 ~~~~l~d~~~~tg-d~~----y~~~a~~~~~~~~~~~~~~~-----------~~~~~DD~a~~~la~~~aye~t~~~~yL 114 (349)
T 3k7x_A 51 LVEVRLDAYLRTK-KQA----DLEVAEKTYLHNKNRNGGTL-----------IHDFYDDMLWNALAAYRLYKATGKSIYL 114 (349)
T ss_dssp HHHHHHHHHHHHC-CHH----HHHHHHHHHHHHHHHTTSSS-----------CCSBHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHhC-CHH----HHHHHHHHHHHHHhcCCCCC-----------CccCccHHHHHHHHHHHHHHHHCCchHH
Confidence 3588999999886 665 56667777776665321111 1223455554 889999999999999
Q ss_pred HHhhc
Q 007041 351 QLATT 355 (620)
Q Consensus 351 ~~a~~ 355 (620)
+.++.
T Consensus 115 ~~A~~ 119 (349)
T 3k7x_A 115 EDAQL 119 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=91.99 E-value=0.95 Score=48.06 Aligned_cols=136 Identities=15% Similarity=0.068 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHhhcc-cccccccCcEEEEecCCCCCCCCCCCCCCCC-CCCCCCCCCCcceeecCCccchHHHHHHH
Q 007041 200 NHVKEIIKWGTDYFLKTF-NHSADSISRMVAQVGAGDTSGGSTTPNDHYC-WMRPEDIDYDRPVTECSSCSDLAAEMAAS 277 (620)
Q Consensus 200 ~dlldeikwg~D~Llkm~-~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~-W~~Pe~~~~~R~v~~~~~~sdla~~~AAA 277 (620)
+..++.++.-++.+++-+ ++++ +.+...+... + .. +..+ ...|.+. -|+ ..++||-++ |.+--
T Consensus 192 ~~~~~~a~~l~~~~~~~f~~~~~---g~l~e~~~~d-w---~~---~~~~~~~~~~~~--~~~-~~~~pGH~i--E~awl 256 (402)
T 3gt5_A 192 QRYLERALVLADRITRRQAAKAD---GLVWEHYDMR-W---EV---DWDYNRDNPKHL--FRP-WGFQPGHQT--EWAKL 256 (402)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTTT---TSCCSEECTT-S---CB---CTTTTTTSTTCS--SSC-SSBCHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCccC---CeeEEEECCC-C---CC---ccccccCCcccc--cCc-CCCCCChHH--HHHHH
Confidence 678888888888888643 3332 4444444321 1 00 1000 1112211 122 246788766 77777
Q ss_pred HHHHhccccCcHHHHHHHHHHHHHHHHHHHcc------cCCcCCCCccccCCCCCCCc--chhHHHHHHHHHHHhCChhh
Q 007041 278 LAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ------RARYSAGSAEAAKFYNSTSY--WDEFIWGGAWLYYATGNSSY 349 (620)
Q Consensus 278 lAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~------~~~y~~~~~~~~~~Y~s~~~--~DE~~wAAaeLy~aTG~~~Y 349 (620)
|-.++++.. ++ ++++.|+++++++.++ .+.+.....+....-.+..+ .-|.+-|++.||+.||++.|
T Consensus 257 Ll~~~~~~~-~~----~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~y 331 (402)
T 3gt5_A 257 LLILDRYIE-VE----WLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERY 331 (402)
T ss_dssp HHHHHHHCC-CT----THHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHhhC-cH----HHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHH
Confidence 777777764 43 4777788888877653 22221110000000011122 23788899999999999999
Q ss_pred HHHhhc
Q 007041 350 LQLATT 355 (620)
Q Consensus 350 l~~a~~ 355 (620)
++.+++
T Consensus 332 l~~a~~ 337 (402)
T 3gt5_A 332 WQWYDR 337 (402)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997653
No 17
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=91.59 E-value=0.46 Score=50.88 Aligned_cols=127 Identities=13% Similarity=0.023 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHH
Q 007041 199 LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASL 278 (620)
Q Consensus 199 ~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAl 278 (620)
-++.++.+.=.+|+|+.-+++. +++....+.. ..|. +.++ -++ +.+.+.+|
T Consensus 132 ~~~~~~~~~~aA~~L~~r~~~~----~g~iqsw~~~---------------~~~~----~~~~-iID-----~~mni~~L 182 (397)
T 2zzr_A 132 DVKALEATIKAADKLMERYQEK----GGFIQAWGEL---------------GYKE----HYRL-IID-----CLLNIQLL 182 (397)
T ss_dssp CHHHHHHHHHHHHHHHTTEETT----TTEECCSSST---------------TCGG----GCEE-ETT-----HHHHTHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCcC----CCEEEecccC---------------CCCC----CCce-eec-----hHhHHHHH
Confidence 4678888999999999877654 4443332211 1121 1122 222 33678899
Q ss_pred HHHhccccCcHHHHHHHHHHHHHHHHHHHcccC-CcCCCC--c-cccCC--CCCCCcchh---------HHHHHHHHHHH
Q 007041 279 AAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRA-RYSAGS--A-EAAKF--YNSTSYWDE---------FIWGGAWLYYA 343 (620)
Q Consensus 279 AaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~-~y~~~~--~-~~~~~--Y~s~~~~DE---------~~wAAaeLy~a 343 (620)
+-|++++. |+.|.+...++|+..-+......+ .|..-. + .+... ..-.++.|+ +++|.++||++
T Consensus 183 ~~A~~~~g-d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~ 261 (397)
T 2zzr_A 183 FFAYEQTG-DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRK 261 (397)
T ss_dssp HHHHHHHC-CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999997 888766666666666555532111 121100 0 01000 012344454 57788999999
Q ss_pred hCChhhHHHhhc
Q 007041 344 TGNSSYLQLATT 355 (620)
Q Consensus 344 TG~~~Yl~~a~~ 355 (620)
|++..||+.|+.
T Consensus 262 T~d~~yL~~A~~ 273 (397)
T 2zzr_A 262 MKDYQQIILFKG 273 (397)
T ss_dssp HCCHHHHHHHHH
T ss_pred HCCHHHHHHHHH
Confidence 999999998864
No 18
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=91.04 E-value=2.9 Score=43.90 Aligned_cols=70 Identities=13% Similarity=0.022 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcch--hHHHHHHHHHHHhCChh
Q 007041 271 AAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWD--EFIWGGAWLYYATGNSS 348 (620)
Q Consensus 271 a~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~D--E~~wAAaeLy~aTG~~~ 348 (620)
-|.+..+|+.++++.+ |+. +++.|++..++.....+. .. |.... -| .+.++.++||++||+++
T Consensus 43 ~G~~~~gl~~~y~~tg-d~~----y~~~a~~~~~~~~~~~g~-------l~--~~~~~-lDd~~~g~~ll~lY~~Tgd~~ 107 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATG-EKR----YFEYAKAYADLLIDDNGN-------LL--FRRDE-LDAIQAGLILFPLYEQTKDER 107 (373)
T ss_dssp HHHHHHHHHHHHHHHC-CHH----HHHHHHHHHHHHBCTTCC-------BC--CCTTC-GGGTGGGGGHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHhC-CHH----HHHHHHHHHHHHhCCCCc-------cc--CCCCC-cchHHHHHHHHHHHHHhCCHH
Confidence 4577888999999997 665 555666666664321111 01 22111 12 14678999999999999
Q ss_pred hHHHhhc
Q 007041 349 YLQLATT 355 (620)
Q Consensus 349 Yl~~a~~ 355 (620)
|++.+..
T Consensus 108 yl~~a~~ 114 (373)
T 1nc5_A 108 YVKAAKR 114 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=89.63 E-value=1.1 Score=47.66 Aligned_cols=127 Identities=15% Similarity=0.121 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHHH
Q 007041 200 NHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 279 (620)
Q Consensus 200 ~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAlA 279 (620)
+..++.+.=.+++|+.-+++. +++....+.. ..|+. ..++ -++. + ++..+|+
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~~----~g~i~sw~~~---------------~~~~~---~~~~-iID~---m--mni~~L~ 158 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRAD----AGIIQAWGPK---------------GDPEN---GGRI-IIDC---L--LNLPLLL 158 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEETT----TTEECCBSST---------------TCTTT---TTEE-EGGG---G--GGHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCC----CCeEEeccCC---------------CCCCC---CceE-Eech---H--HHHHHHH
Confidence 578888888999999887754 3333222110 11221 1122 2332 2 5688999
Q ss_pred HHhccccCcHHHHHHHHHHHHHHHHHHHcccCC-cCC---CCccccCC--CCCCCcchh---------HHHHHHHHHHHh
Q 007041 280 AASIVFKDNKAYSQKLVHGAKTLFQFSRQQRAR-YSA---GSAEAAKF--YNSTSYWDE---------FIWGGAWLYYAT 344 (620)
Q Consensus 280 aAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~-y~~---~~~~~~~~--Y~s~~~~DE---------~~wAAaeLy~aT 344 (620)
-|++++. |+.|.+...++|+..-+......+. |.. +...+... ..-.++.|+ +++|.++||++|
T Consensus 159 ~A~~~~g-d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T 237 (377)
T 2ahf_A 159 WAGEQTG-DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYL 237 (377)
T ss_dssp HHHHHHC-CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHH
Confidence 9999997 7877666566665555544221111 111 00011000 012344555 577889999999
Q ss_pred CChhhHHHhhc
Q 007041 345 GNSSYLQLATT 355 (620)
Q Consensus 345 G~~~Yl~~a~~ 355 (620)
++..||+.++.
T Consensus 238 ~d~~yL~~A~~ 248 (377)
T 2ahf_A 238 GNADLLETAKR 248 (377)
T ss_dssp TCHHHHHHHHH
T ss_pred CChHHHHHHHH
Confidence 99999998864
No 20
>3k4z_A Glycoside hydrolase family 9; cellulase, CBHA, CBM4, IG-like, cellulosome, CBM, sugar binding protein; HET: CBI XGP; 2.11A {Clostridium thermocellum dsm 4150}
Probab=87.36 E-value=0.14 Score=52.48 Aligned_cols=40 Identities=8% Similarity=0.003 Sum_probs=27.2
Q ss_pred CCccccccccccCCCcccceeEeeecceeecCe-EEEEEcc
Q 007041 40 RPLDETQQSWLLGPTEKKKKKYVDLGCIIVSRK-IFVWTVG 79 (620)
Q Consensus 40 ~~~~~t~q~w~~~~~~~~~~~~~Dfs~v~~~g~-~~~~~~~ 79 (620)
.++.++...|..-....++++++|||.|++||+ |+|...+
T Consensus 224 ~V~~g~~~~~~~~~~sg~~~~~~DFS~~~~~G~~Y~l~~~~ 264 (289)
T 3k4z_A 224 VVLEGYTEPKGLDKDSQDYVHWLDFSDFATEGIGYYFELPT 264 (289)
T ss_dssp EEEEEECEEEECC-----EEEEEECTTCCCCEEEEEEECTT
T ss_pred EEEEEeeeccccccCCCCeEEEEEccCcccCCCeEEEEECC
Confidence 455666666632221227899999999999999 9988766
No 21
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=87.25 E-value=2.4 Score=44.63 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHh-hcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHHH
Q 007041 201 HVKEIIKWGTDYFL-KTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 279 (620)
Q Consensus 201 dlldeikwg~D~Ll-km~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAlA 279 (620)
.+..|+.=-+.|++ ++++... |+|+..+... + .|-. .++.+ -.-|.++.++|
T Consensus 14 ~l~~~~~~~l~~w~~~~~D~~~---GGf~~~~~~d--------------g-~~~~--~~k~l-------~~nar~l~~~a 66 (402)
T 1fp3_A 14 RVGQELDRVMAFWLEHSHDREH---GGFFTCLGRD--------------G-RVYD--DLKYV-------WLQGRQVWMYC 66 (402)
T ss_dssp HHHHHHHHHHHHHHHHSBCTTT---SSBCCCBCTT--------------S-CBSC--CCEEH-------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCCCCC---CCEeeEECCC--------------C-CCCC--Cccch-------hhhHHHHHHHH
Confidence 34455555677777 6777653 6777776532 1 1221 11222 23568899999
Q ss_pred HHhccc--cCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCcccc-CCCCC-----------CCcch--hHHHHHHHHHHH
Q 007041 280 AASIVF--KDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAA-KFYNS-----------TSYWD--EFIWGGAWLYYA 343 (620)
Q Consensus 280 aAs~vf--k~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~-~~Y~s-----------~~~~D--E~~wAAaeLy~a 343 (620)
.|++++ ..++ ++++.|++..+|..++= +.. ... ++|.+ ....| -++||.++||++
T Consensus 67 ~a~~~~~~~~~~----~~l~~A~~~~~fl~~~~--~d~---~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~a 137 (402)
T 1fp3_A 67 RLYRKLERFHRP----ELLDAAKAGGEFLLRHA--RVA---PPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRV 137 (402)
T ss_dssp HHHHHCGGGCCH----HHHHHHHHHHHHHHHHT--BSS---TTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCH----HHHHHHHHHHHHHHHhc--cCc---CCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 999998 2255 57888999999988741 110 001 22211 11112 357899999999
Q ss_pred hCChhhHHHhhc
Q 007041 344 TGNSSYLQLATT 355 (620)
Q Consensus 344 TG~~~Yl~~a~~ 355 (620)
||+..|++.+.+
T Consensus 138 tgd~~~~~~A~~ 149 (402)
T 1fp3_A 138 TAEARYQSEAVD 149 (402)
T ss_dssp HCCHHHHHHHHH
T ss_pred hCCHHHHHHHHH
Confidence 999999987664
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=84.17 E-value=2 Score=45.25 Aligned_cols=85 Identities=13% Similarity=-0.007 Sum_probs=52.4
Q ss_pred cCCccchHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHH-Hcc------cCCcCC-CC-ccccCCCCCCC----cc
Q 007041 264 CSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFS-RQQ------RARYSA-GS-AEAAKFYNSTS----YW 330 (620)
Q Consensus 264 ~~~~sdla~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a-~~~------~~~y~~-~~-~~~~~~Y~s~~----~~ 330 (620)
++||=++ +.+-.|+.+++++. ++. +++.|+++++++ .++ .+.+.. .. .....++.+.. ..
T Consensus 244 ~~pgh~i--e~~wlL~~a~~~~~-~~~----~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~q 316 (402)
T 1fp3_A 244 QNPGHAL--EAGWFLLRHSSRSG-DAK----LRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPH 316 (402)
T ss_dssp ECHHHHH--HHHHHHHHHHHHTT-CHH----HHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHH
T ss_pred CCCCcHH--HHHHHHHHHHHHcC-ChH----HHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHH
Confidence 4566555 67778999999996 664 566777777777 442 222211 00 00011111110 01
Q ss_pred hhHHHHHHHHHHHhCChhhHHHhhc
Q 007041 331 DEFIWGGAWLYYATGNSSYLQLATT 355 (620)
Q Consensus 331 DE~~wAAaeLy~aTG~~~Yl~~a~~ 355 (620)
-|.+.|++.||++||+..|++.+++
T Consensus 317 aea~~a~l~ly~~tgd~~yl~~a~~ 341 (402)
T 1fp3_A 317 SEAMIAFLMGYSESGDPALLRLFYQ 341 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2779999999999999999987764
No 23
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=82.05 E-value=54 Score=34.42 Aligned_cols=113 Identities=11% Similarity=0.037 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHHH
Q 007041 200 NHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 279 (620)
Q Consensus 200 ~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAlA 279 (620)
.+|.+.|+--++-|+++.+.+ +.|-.++.++.. .|.. ...++-++ .|-+..+|.
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~----~~f~~~~~~~~~-------~d~k--------~~~~W~Wt-------~G~~~~gl~ 78 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDES----GQFLLRLDDGRV-------IDTK--------GWAGWEWT-------HGVGLYGIY 78 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTT----CTTCEECTTSCE-------ECSS--------STTSCSHH-------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcc----ccccccCCcccc-------ccCC--------CCcCcccc-------HHHHHHHHH
Confidence 456677777788888886664 566666543311 0111 11222222 457888888
Q ss_pred HHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHHHHHhCChhhHHHhhc
Q 007041 280 AASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATT 355 (620)
Q Consensus 280 aAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl~~a~~ 355 (620)
.++++.+ |+.|- +.|++.++......+... . .+.++ .+.+.++||+.||+++|++.+..
T Consensus 79 ~~ye~Tg-d~~y~----~~a~~~~~~~~~~~~~~~-n----~D~~~-------~~~~l~~lY~~Tgd~~Yl~~a~~ 137 (382)
T 3pmm_A 79 QYYQQTG-DIEMR----DIIDRWFADRFAEGATTK-N----VNTMA-------PFLTLAYRFEETGRMAYLPWLES 137 (382)
T ss_dssp HHHHHHC-CHHHH----HHHHHHHHHHHHHCCCCC-C----TTTTT-------THHHHHHHHHHHCCGGGHHHHHH
T ss_pred HHHHHHC-CHHHH----HHHHHHHHHHHcCCCCcC-c----ccchH-------HHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999887 76554 444443332222111100 0 01111 23467999999999999998753
No 24
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.93 E-value=5.9 Score=42.94 Aligned_cols=115 Identities=12% Similarity=0.017 Sum_probs=72.7
Q ss_pred CChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHH
Q 007041 197 GELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAA 276 (620)
Q Consensus 197 ~~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AA 276 (620)
.+.+++++.++=-++.|++.|+++ | +++||-|. |+ -|.-++| +|.+|.
T Consensus 287 ~~r~~l~~~~~~~a~~l~~~Q~~~----G-~W~~vld~-----------------~~-------~y~EsSa---TAmfay 334 (445)
T 3k11_A 287 PQRPKVMDYFRAHVRGVTALQSGE----G-FWHQLLDC-----------------ND-------SYLETSA---TAIYVY 334 (445)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCTT----S-CEESBTTC-----------------TT-------SCEEHHH---HHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCC----C-chhhccCC-----------------CC-------CCCCccH---HHHHHH
Confidence 467889999999999999999864 4 66676432 21 0111233 678999
Q ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccC---CcCCCCcccc------CCCCCCC--cc-----hhHHHHHHHH
Q 007041 277 SLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRA---RYSAGSAEAA------KFYNSTS--YW-----DEFIWGGAWL 340 (620)
Q Consensus 277 AlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~---~y~~~~~~~~------~~Y~s~~--~~-----DE~~wAAaeL 340 (620)
+|+-+.|.--.| +++++..|+++|+.+.++-. ... +.-.++ .+|.+.. .. --++||++||
T Consensus 335 gllkgvr~G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~-~v~~gtg~g~d~~~Y~~~p~~~~d~~G~G~fllA~~E~ 410 (445)
T 3k11_A 335 CLAHAINKGWID---AIAYGPVAQLGWHAVAGKINEEGQVE-GTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEM 410 (445)
T ss_dssp HHHHHHHHTSSC---HHHHHHHHHHHHHHHHTTBCTTSCBC-SCBCCCCCCSSHHHHHTCCBCTTCGGGHHHHHHHHHHH
T ss_pred HHHHHHHcCCCC---HHHHHHHHHHHHHHHHHhCCCCCCEe-ceeeccCCCCCchhhccCcccCCCCccHHHHHHHHHHH
Confidence 999888753234 35789999999999987421 111 100011 1333211 11 2489999999
Q ss_pred HHHhCCh
Q 007041 341 YYATGNS 347 (620)
Q Consensus 341 y~aTG~~ 347 (620)
++..++.
T Consensus 411 ~~l~~~~ 417 (445)
T 3k11_A 411 IRLLNTQ 417 (445)
T ss_dssp HHHHHHS
T ss_pred HHHhccC
Confidence 9987543
No 25
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=74.41 E-value=43 Score=36.15 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcc----------cCCcCCCCccccCCCCCCCcchh---HHHHHH
Q 007041 272 AEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ----------RARYSAGSAEAAKFYNSTSYWDE---FIWGGA 338 (620)
Q Consensus 272 ~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~----------~~~y~~~~~~~~~~Y~s~~~~DE---~~wAAa 338 (620)
|.+..+|+.++++.+ |+.| ++.|++..+|..++ .+..... .... +. .++-|+ ++|+-+
T Consensus 85 Gv~l~gl~~ay~~Tg-d~kY----~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~--~r~~-~~-~~~LDD~g~~~~~Li 155 (445)
T 3k11_A 85 GVTYSALIAAAETTG-DKRY----TDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ--LLQI-LT-PHALDDAGAVCTAMI 155 (445)
T ss_dssp HHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH--HHHH-HS-CCSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHhccchhhhhhhccCCeecc--cccc-cC-CCcchhHHHHHHHHH
Confidence 688999999999997 6544 44455444444331 1111000 0000 11 223333 458999
Q ss_pred HHHHHhCChhhHHHhhc
Q 007041 339 WLYYATGNSSYLQLATT 355 (620)
Q Consensus 339 eLy~aTG~~~Yl~~a~~ 355 (620)
+||++|++.+|++.+.+
T Consensus 156 ~lY~~T~d~~yl~~a~~ 172 (445)
T 3k11_A 156 KLRLKDESLPVDGLIQN 172 (445)
T ss_dssp HHHHHCTTCCCHHHHHH
T ss_pred HHHHhcCCHHHHHHHHH
Confidence 99999999999998874
No 26
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=70.71 E-value=12 Score=39.67 Aligned_cols=140 Identities=6% Similarity=-0.091 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHhhc-ccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 007041 176 SFTITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKT-FNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPED 254 (620)
Q Consensus 176 a~s~~~L~w~~~e~~~~~~~~~~~~dlldeikwg~D~Llkm-~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~ 254 (620)
.+....++|++.+-. . -+.++.++.++-+++||++- .+... |+||..|... |..|.
T Consensus 50 ~~~nar~i~~~a~a~---~--~g~~~~l~~A~~~~~fl~~~~~D~~~---GG~~~s~d~d--------------g~~~~- 106 (421)
T 2zbl_A 50 LWITARMLHVYSVAA---S--MGRPGAYDLVDHGIKAMNGALRDKKY---GGWYACVNDQ--------------GVVDA- 106 (421)
T ss_dssp HHHHHHHHHHHHHHH---H--TTCTTHHHHHHHHHHHHTTTTBCTTT---SSBCSEEETT--------------EEEEC-
T ss_pred HHHHHHHHHHHHHHH---H--cCChhHHHHHHHHHHHHHHhccCcCC---CeEEEEeCCC--------------CCcCC-
Confidence 355566666555432 2 24578999999999999985 33322 5677666211 22222
Q ss_pred CCCCcceeecCCccchHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcc---c--CCcCCC-CccccCCCCCCC
Q 007041 255 IDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ---R--ARYSAG-SAEAAKFYNSTS 328 (620)
Q Consensus 255 ~~~~R~v~~~~~~sdla~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~---~--~~y~~~-~~~~~~~Y~s~~ 328 (620)
...+| | =|.++.+++. +++.. ++. .++.|++++++..++ + +-|... ..+..+.-....
T Consensus 107 ---~k~ly------d-~Af~i~al~~-~~~tg-~~~----~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~ 170 (421)
T 2zbl_A 107 ---SKQGY------Q-HFFALLGAAS-AVTTG-HPE----ARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRG 170 (421)
T ss_dssp ---CEEHH------H-HHHHHHHHHH-HHTTT-CTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEE
T ss_pred ---chhHH------H-HHHHHHHHHH-HHHhC-Ccc----HHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCC
Confidence 11111 1 1355666666 56654 443 456677777777662 1 212110 000000000012
Q ss_pred cchh--HHHHHHHHHHHhCChhhHHHhh
Q 007041 329 YWDE--FIWGGAWLYYATGNSSYLQLAT 354 (620)
Q Consensus 329 ~~DE--~~wAAaeLy~aTG~~~Yl~~a~ 354 (620)
.... ++-|.+.||++||+..|++.+.
T Consensus 171 ~n~~m~~~~al~~l~~~tgd~~~~~~A~ 198 (421)
T 2zbl_A 171 GNANMHAVEAFLIVYDVTHDKKWLDRAL 198 (421)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 3333 3667889999999999997554
No 27
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=69.74 E-value=51 Score=34.62 Aligned_cols=72 Identities=13% Similarity=-0.021 Sum_probs=38.9
Q ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHHHHHc-ccC----CcCCCCccccCCCCCCCcchhHHHH---HHHHHHHhCChh
Q 007041 277 SLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQ-QRA----RYSAGSAEAAKFYNSTSYWDEFIWG---GAWLYYATGNSS 348 (620)
Q Consensus 277 AlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~-~~~----~y~~~~~~~~~~Y~s~~~~DE~~wA---AaeLy~aTG~~~ 348 (620)
+|....++-+ |+. +++.|+++.+++.+ .|. .+.... ....|...-|-|-++.+ -+++++.||+++
T Consensus 118 ~l~~lY~~Tg-d~~----Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~--~~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~ 190 (382)
T 3pmm_A 118 TLAYRFEETG-RMA----YLPWLESWAEWAMHEMPRTEQGGMQHMT--LAEENHQQMWDDTLMMTVLPLAKIGKLLNRPQ 190 (382)
T ss_dssp HHHHHHHHHC-CGG----GHHHHHHHHHHHHHTSCBCGGGCBCCCC--SSCCCTTEEETTHHHHTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhC-CHH----HHHHHHHHHHHHHhhCCCCcCCCeeeec--CCCCCCCcEEecchhhhHHHHHHHHHHHCCHH
Confidence 3444455443 664 56666666666643 221 111100 00123333455655443 478999999999
Q ss_pred hHHHhhc
Q 007041 349 YLQLATT 355 (620)
Q Consensus 349 Yl~~a~~ 355 (620)
|++.|..
T Consensus 191 y~d~A~~ 197 (382)
T 3pmm_A 191 YVEEATY 197 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=65.58 E-value=9.1 Score=40.66 Aligned_cols=88 Identities=15% Similarity=0.098 Sum_probs=52.5
Q ss_pred ecCCccchHHHHHHHHHHHhcccc--Cc--HHHHHHHHHHHHHHHHHHHcc-------cCCcCCCCccccCCCCCCCcc-
Q 007041 263 ECSSCSDLAAEMAASLAAASIVFK--DN--KAYSQKLVHGAKTLFQFSRQQ-------RARYSAGSAEAAKFYNSTSYW- 330 (620)
Q Consensus 263 ~~~~~sdla~~~AAAlAaAs~vfk--~d--~~yA~~lL~~A~~~y~~a~~~-------~~~y~~~~~~~~~~Y~s~~~~- 330 (620)
.++||-++ +.+=.|..++++.. .+ + .++++.|+++++++.++ .+.+..........=....++
T Consensus 243 ~~~pgh~i--E~~wlLl~~~~~~~~~~~~~~---~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~ 317 (421)
T 2zbl_A 243 GGTPGAWI--EWGRLMLHLHAALEARFETPP---AWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWP 317 (421)
T ss_dssp SBCHHHHH--HHHHHHHHHHHHHHHTTCCCC---THHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHH
T ss_pred CCCCChHH--HHHHHHHHHHHHcccccccch---HHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHH
Confidence 34577655 66777777777763 12 2 15778888888887552 232221110000000112223
Q ss_pred -hhHHHHHHHHHHHhCChhhHHHhhc
Q 007041 331 -DEFIWGGAWLYYATGNSSYLQLATT 355 (620)
Q Consensus 331 -DE~~wAAaeLy~aTG~~~Yl~~a~~ 355 (620)
-|.+-|++.||+.||+..|++.+.+
T Consensus 318 ~aea~~all~l~~~tgd~~yl~~a~~ 343 (421)
T 2zbl_A 318 IVEAMGTAYALYTLTDDSQYEEWYQK 343 (421)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3788899999999999999987653
No 29
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=64.11 E-value=41 Score=35.60 Aligned_cols=115 Identities=21% Similarity=0.197 Sum_probs=70.1
Q ss_pred ChhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHH
Q 007041 198 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAAS 277 (620)
Q Consensus 198 ~~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAA 277 (620)
+.+.+++.|+=.++|+++.+.++ ++ |-.......++.+..+ -| +.-++-+
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~-------------g~-------------wp~~~~~~~~~~~~wC-hG---~~Gi~~~ 297 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPS-------------GN-------------YPPCIGDNRDLLVHWC-HG---APGVIYM 297 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTT-------------SC-------------CCSBTTCCCCCCCSSS-SS---HHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhccC-------------CC-------------CCCCCCcccCcccccc-CC---cHHHHHH
Confidence 45678899999999999986433 11 2100011112333333 45 3356777
Q ss_pred HHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHHHHHhCChhhHHHhhc
Q 007041 278 LAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATT 355 (620)
Q Consensus 278 lAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl~~a~~ 355 (620)
+..+++++. |++|.+.+.++++..|+...- ..+..-.-| .++ .+..-..||+.|+++.|++.+..
T Consensus 298 l~~~~~~~~-~~~~~~~a~~~~~~~~~~g~~-----~~~~~lChG---~aG----~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 298 LIQAYKVFR-EEKYLCDAYQCADVIWQYGLL-----KKGYGLCHG---SAG----NAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp HHHHHHHHC-CHHHHHHHHHHHHHHHHHCSB-----TTCSCSTTS---HHH----HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHHHHhcCcc-----CCCCceecC---hHH----HHHHHHHHHHHhCCHHHHHHHHH
Confidence 888888886 888877777777777774210 011000111 111 56778899999999999987764
No 30
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=63.65 E-value=41 Score=34.89 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCC--CCCCCCCCcceeecCCccchHHHHHH
Q 007041 199 LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWM--RPEDIDYDRPVTECSSCSDLAAEMAA 276 (620)
Q Consensus 199 ~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~--~Pe~~~~~R~v~~~~~~sdla~~~AA 276 (620)
-+...+-|+=|++|||.||.++ |+ |. .|....+...+- =+-|+++.+.-
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~n----GG----------------------WpqFdpd~~~Yl~~Ip---FnDDvtarvLe 142 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYST----GA----------------------LPQFYPLKGGYSDHAT---FNDNGMAYALT 142 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTT----SC----------------------CBSEESCCSGGGGSEE---CGGGHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhccCCC----CC----------------------ccccCCCcccccccCC---cchHHHHHHHH
Confidence 3678899999999999998876 21 21 122211111121 13378889999
Q ss_pred HHHHHhc--------cccCcHHHHHHHHHHHHHHHHHHHccc
Q 007041 277 SLAAASI--------VFKDNKAYSQKLVHGAKTLFQFSRQQR 310 (620)
Q Consensus 277 AlAaAs~--------vfk~d~~yA~~lL~~A~~~y~~a~~~~ 310 (620)
+|+.... +|. |.+. .+...+.+++-+|..+..
T Consensus 143 lL~~~~~~~~~~~~~~~~-~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 143 VLDFAANKRAPFDTDVFS-DNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp HHHHHHTTCTTSCSTTSC-HHHH-HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhccCCccccccc-cchh-hhhHHHHHHHHHHHHHhh
Confidence 9988864 243 5566 778888999999998854
No 31
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=57.08 E-value=11 Score=39.33 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHH---HHHHHHhCChhhHHHhhc
Q 007041 294 KLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGG---AWLYYATGNSSYLQLATT 355 (620)
Q Consensus 294 ~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAA---aeLy~aTG~~~Yl~~a~~ 355 (620)
++++.|+++.+++.++|.. ..+.-.....|....+.|.++++. ++|++.||+.+|++.+..
T Consensus 107 ~yl~~a~~la~~l~~~~r~-~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT-SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC-TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC-CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4677888888888766521 111100011222344678876655 688899999999988865
No 32
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=48.26 E-value=1.4e+02 Score=30.81 Aligned_cols=72 Identities=6% Similarity=-0.037 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCCCCcchhHHHHHHHHHHHhCChhhH
Q 007041 271 AAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYL 350 (620)
Q Consensus 271 a~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s~~~~DE~~wAAaeLy~aTG~~~Yl 350 (620)
++-++-++..+.+++. |+.|.+.+.++++.+++. +....+..-+-|. . -.+.....||+.|++..|+
T Consensus 281 ~~Gi~~~l~~~~~~~~-d~~~~~~a~~~~~~~~~~-----~~~~~~~~LCHG~---a----G~~~~l~~l~~~~~~~~~~ 347 (409)
T 2g0d_A 281 GPGISLLYLYGGLALD-NDYFVDKAEKILESAMQR-----KLGIDSYMICHGY---S----GLIEICSLFKRLLNTKKFD 347 (409)
T ss_dssp HHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHH-----CTTCCSCCTTTSH---H----HHHHHHHHHHHHHCCCTTH
T ss_pred CHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHh-----ccCCCCCCCCChH---H----HHHHHHHHHHHHhCCHHHH
Confidence 3457778888888886 787766666666666654 1001110001111 1 1567778899999999999
Q ss_pred HHhhc
Q 007041 351 QLATT 355 (620)
Q Consensus 351 ~~a~~ 355 (620)
..+..
T Consensus 348 ~~a~~ 352 (409)
T 2g0d_A 348 SYMEE 352 (409)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 33
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=46.36 E-value=94 Score=33.89 Aligned_cols=99 Identities=13% Similarity=-0.016 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhhcccccccccC--cEEEEe--cCCCC----CCCCCCC--CCCCCCC--CCCCCCCCcceeecCCcc
Q 007041 201 HVKEIIKWGTDYFLKTFNHSADSIS--RMVAQV--GAGDT----SGGSTTP--NDHYCWM--RPEDIDYDRPVTECSSCS 268 (620)
Q Consensus 201 dlldeikwg~D~Llkm~~~~~~~~g--~~y~qV--gd~~~----~~g~~~~--~DH~~W~--~Pe~~~~~R~v~~~~~~s 268 (620)
..++-++--+++|..+|..+ + +.|.-. .+... ..|...| .-...|+ ||.++...+.++ .-|
T Consensus 205 ~w~~av~~il~~l~~eq~~~----~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~---ipS 277 (489)
T 2p0v_A 205 EWLQAIANVLKTFKEQQRKD----DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFL---VPS 277 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCSS----CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEE---HHH
T ss_pred HHHHHHHHHHHHHHHHhccc----CCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcc---hHH
Confidence 55578888999999987765 2 222211 00000 0000000 0112354 677665322222 223
Q ss_pred chHHHHHHHHHHHhcccc---CcHHHHHHHHHHHHHHHHHHHc
Q 007041 269 DLAAEMAASLAAASIVFK---DNKAYSQKLVHGAKTLFQFSRQ 308 (620)
Q Consensus 269 dla~~~AAAlAaAs~vfk---~d~~yA~~lL~~A~~~y~~a~~ 308 (620)
.+.++++|-.++.+.+ .+.++|+++.+.|+++-+-..+
T Consensus 278 --N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~ 318 (489)
T 2p0v_A 278 --NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKK 318 (489)
T ss_dssp --HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 3488899999988886 3788999999999998776655
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=44.18 E-value=78 Score=33.74 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCC--CCCCCCCCcceeecCCccchHHHHHH
Q 007041 199 LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWM--RPEDIDYDRPVTECSSCSDLAAEMAA 276 (620)
Q Consensus 199 ~~dlldeikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~--~Pe~~~~~R~v~~~~~~sdla~~~AA 276 (620)
-+...+-++=|++|||.||.++ | . |. .|....+...+- =+-|+++.+.-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~n----G---------G-------------WpqFdpdn~~y~~~Ip---FnDDvt~rvle 220 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPN----G---------G-------------WPQVWPLEGGYHDAIT---YNDDALVHVAE 220 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTT----S---------C-------------CBSBSSCCCGGGGSEE---CGGGHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCCC----C---------C-------------CcCcCccccccccCCC---cCcHHHHHHHH
Confidence 4678899999999999999876 2 1 21 233221112221 12377888888
Q ss_pred HHHHHhcc---cc-CcHHHHHHHHHHHHHHHHHHHccc
Q 007041 277 SLAAASIV---FK-DNKAYSQKLVHGAKTLFQFSRQQR 310 (620)
Q Consensus 277 AlAaAs~v---fk-~d~~yA~~lL~~A~~~y~~a~~~~ 310 (620)
.|+....- |. .++++..+...+.+++-+|+.+..
T Consensus 221 ~L~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 221 LLSDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp HHHHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhccCcccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 88887762 34 588888899999999999998854
No 35
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=32.55 E-value=3e+02 Score=28.80 Aligned_cols=66 Identities=21% Similarity=0.065 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCCCCccccCCCCC-CCcchhHHHHHHHHHHHhCChhhH
Q 007041 272 AEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNS-TSYWDEFIWGGAWLYYATGNSSYL 350 (620)
Q Consensus 272 ~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~~~~~~~~~Y~s-~~~~DE~~wAAaeLy~aTG~~~Yl 350 (620)
+-+|-.|+..+++++ |++|.+.+.+..+. ..++-. +. ..++++. .+ .+++.+.||+.+|+..+.
T Consensus 78 ~Gia~~l~~l~~~t~-d~~yl~~a~~~l~~----~~~~l~---~~---~~~~~~G~aG----~l~~l~~ly~~~g~~~~a 142 (411)
T 3e6u_A 78 AGIAVLYLHLYDVFG-DPAYLQLAHGYVKQ----SLNCLT---KR---SITFLCGDAG----PLAVAAVLYHKMNNEKQA 142 (411)
T ss_dssp HHHHHHHHHHHHHHC-CHHHHHHHHHHHHH----HHTTCC---SC---CCCTTTSTHH----HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhcC-CHHHHHHHHHHHHH----HHHHhc---cc---CCccccCcHH----HHHHHHHHHHHhCCHHHH
Confidence 356777888888886 66554444433333 333211 11 1234432 22 688889999999997644
Q ss_pred HH
Q 007041 351 QL 352 (620)
Q Consensus 351 ~~ 352 (620)
..
T Consensus 143 ~~ 144 (411)
T 3e6u_A 143 ED 144 (411)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 36
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=32.37 E-value=1.1e+02 Score=32.09 Aligned_cols=146 Identities=11% Similarity=0.002 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhHHHHhhcCChhHHHHHHHHHHHHHhhcc-cccccccCcEEEEec-CCCCCCCCCCCCCCCCCCCCCCCC
Q 007041 179 ITMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTF-NHSADSISRMVAQVG-AGDTSGGSTTPNDHYCWMRPEDID 256 (620)
Q Consensus 179 ~~~L~w~~~e~~~~~~~~~~~~dlldeikwg~D~Llkm~-~~~~~~~g~~y~qVg-d~~~~~g~~~~~DH~~W~~Pe~~~ 256 (620)
+..|+|+.... +-++.+++++=-++++++-+ +++ +.+||.+- |... |.. -|. |..+.--+
T Consensus 154 i~~L~~A~~~~--------gd~~y~~~A~~~a~~~l~~~~r~d----gs~~h~~~~D~~t--G~~---~~~-~t~qG~~d 215 (377)
T 2ahf_A 154 LPLLLWAGEQT--------GDPEYRRVAEAHALKSRRFLVRGD----DSSYHTFYFDPEN--GNA---IRG-GTHQGNTD 215 (377)
T ss_dssp HHHHHHHHHHH--------CCTHHHHHHHHHHHHHHHHTBBTT----SCBCSEEEECTTT--CCE---EEE-ECSSSSST
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCC----CCeEEEEEeeCCC--CCe---eeC-CCcCCcCC
Confidence 56677765542 45789999999999999965 444 66776653 1111 100 000 00000000
Q ss_pred CCcceeecCCccchHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHccc-C--C-cCC-CCccccCCCCCCCcch
Q 007041 257 YDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQR-A--R-YSA-GSAEAAKFYNSTSYWD 331 (620)
Q Consensus 257 ~~R~v~~~~~~sdla~~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~-~--~-y~~-~~~~~~~~Y~s~~~~D 331 (620)
+..+ +-| -|-++-+++...++-+ |+ ++|+.|+++-++..++- . . |.+ ..+.....+.+++-.-
T Consensus 216 ds~W----aRG---qAw~i~gl~~ly~~T~-d~----~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~Sa~a 283 (377)
T 2ahf_A 216 GSTW----TRG---QAWGIYGFALNSRYLG-NA----DLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASA 283 (377)
T ss_dssp TSCB----HHH---HHHHHHHHHHHHHHHT-CH----HHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCHHHHH
T ss_pred cchh----HHH---HHHHHHHHHHHHHHHC-Ch----HHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCCCHHH
Confidence 0000 011 1345555666666654 54 56888998888888752 1 1 221 1111111222221111
Q ss_pred hHHHHHHHHHHHhC-----ChhhHHHhh
Q 007041 332 EFIWGGAWLYYATG-----NSSYLQLAT 354 (620)
Q Consensus 332 E~~wAAaeLy~aTG-----~~~Yl~~a~ 354 (620)
=++.+-++|.+.|+ +..|++.+.
T Consensus 284 iaA~~Ll~L~~~~~~~~~~~~~Y~~~A~ 311 (377)
T 2ahf_A 284 ITACGLLEIASQLDESDPERQRFIDAAK 311 (377)
T ss_dssp HHHHHHHHHHHTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccccchHHHHHHHH
Confidence 23456677888886 566877654
No 37
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=23.97 E-value=41 Score=36.47 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=41.9
Q ss_pred HHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHcccCCcCC-CCccc--c-CCCCCCCcchhHHHHHHHHHHHhCChh
Q 007041 273 EMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSA-GSAEA--A-KFYNSTSYWDEFIWGGAWLYYATGNSS 348 (620)
Q Consensus 273 ~~AAAlAaAs~vfk~d~~yA~~lL~~A~~~y~~a~~~~~~y~~-~~~~~--~-~~Y~s~~~~DE~~wAAaeLy~aTG~~~ 348 (620)
++--+++.|.|+-+ |++ |.+-+..+...... +.... +.... . ..=+++.+ ++.|.+|||++|++..
T Consensus 377 ~yll~~vra~~~s~-D~~----Lw~~~~~ma~~~~l--gdi~~~~~~~~~~~~~~~~~sp~---lL~allEL~~atq~~~ 446 (543)
T 2v8i_A 377 EFLISYARAYAIDN-DPL----LWKVARGIANDQGL--GDIGTAPGKEVKVNMDTTNSDPY---ALFALLDLYHASQVAD 446 (543)
T ss_dssp HHHHHHHHHHHHSC-CHH----HHHHHHHHHHHTTC--EECTTBTTBSCEECTTCCCCCHH---HHHHHHHHHHHHCCHH
T ss_pred hhhHHHHHHHHcCC-CHH----HHHHHHHHHhhCCc--cccCCCcCcccccccCCCCcCHH---HHHHHHHHHHHhCCHH
Confidence 67778888888876 543 55555554433221 11110 00000 0 00111222 6889999999999999
Q ss_pred hHHHhhc
Q 007041 349 YLQLATT 355 (620)
Q Consensus 349 Yl~~a~~ 355 (620)
|++.|..
T Consensus 447 ~l~lA~~ 453 (543)
T 2v8i_A 447 YRKLAEK 453 (543)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998864
No 38
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=21.59 E-value=2.7e+02 Score=29.37 Aligned_cols=31 Identities=3% Similarity=-0.172 Sum_probs=23.2
Q ss_pred ChhHHHHHHHHHHHHHhhcc-cccccccCcEEEEec
Q 007041 198 ELNHVKEIIKWGTDYFLKTF-NHSADSISRMVAQVG 232 (620)
Q Consensus 198 ~~~dlldeikwg~D~Llkm~-~~~~~~~g~~y~qVg 232 (620)
+-++.+++++=-++++++-+ +++ |.+||.+-
T Consensus 190 gd~~y~~~A~~ha~~~l~~~~r~d----gs~~h~~~ 221 (397)
T 2zzr_A 190 GDEKYRQVAVNHFYASANNVVRDD----SSAFHTFY 221 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCTT----SCBCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCC----CCeEEEEE
Confidence 45889999998889888865 444 67777664
No 39
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=21.19 E-value=2.5e+02 Score=30.50 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=52.9
Q ss_pred hHHH-HHHHHHHHHHhhcccccccccCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecCCccchHHHHHHHH
Q 007041 200 NHVK-EIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASL 278 (620)
Q Consensus 200 ~dll-deikwg~D~Llkm~~~~~~~~g~~y~qVgd~~~~~g~~~~~DH~~W~~Pe~~~~~R~v~~~~~~sdla~~~AAAl 278 (620)
.++- ..||--+||+.+..+.. |+..|.. |. ...+-+ .+++-+||
T Consensus 183 ~~~~~~~i~~~l~~v~~~w~~p------------------------d~dlWEe-------r~--g~~~~T--~~~~~~AL 227 (492)
T 2fba_A 183 EDIYKNIIKPDLEYVIGYWDST------------------------GFDLWEE-------NQ--GRHFFT--SLVQQKAL 227 (492)
T ss_dssp HHHHHHTHHHHHHHHHHHTTSC------------------------EECTTSC-------CE--ECCHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC------------------------CCCCcCc-------cC--CCChHH--HHHHHHHH
Confidence 5665 78999999999987654 5667841 21 112223 34667777
Q ss_pred HHHhcccc--CcHHHHHHHHHHHHHHHHHHHcc
Q 007041 279 AAASIVFK--DNKAYSQKLVHGAKTLFQFSRQQ 309 (620)
Q Consensus 279 AaAs~vfk--~d~~yA~~lL~~A~~~y~~a~~~ 309 (620)
-.|+++-+ .+++.+++|.+.|.++.+...++
T Consensus 228 ~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~~ 260 (492)
T 2fba_A 228 AYAVDIAKSFDDGDFANTLSSTASTLESYLSGS 260 (492)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHh
Confidence 77766655 57889999999999998888775
Done!