Citrus Sinensis ID: 007046

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
Protein Sequence
MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccEEcEEEcccccEEEEEEEcccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccEEEcccccccEEEcccccccccccEEEEEEcccccEEEEEEccccccccccHHHHHcccccccEEEEEcccccccccccccccccccccccEEEEEEccEEEEEccccccccccccccccccccEEEEEEccccHHHHHHccccccccHHHHHHHHHHHHHHHHHcEEEcccccccHHcccccccccccccEEccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEcccccccccccHHHEEEEEEEccccccEEEEEEEEccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccEEEEEEHcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEccccHHHEEEccccEEEEEcccHHHHHccccccccccccccccHHHccHHHHcHHHccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHcccccHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEEcccccccccccccEEEEEEccEEEEEEEEEcccccccccEEEEEcccccccEEEEEEEEEEcccccccEEEEEcccccccEEEEEccccccccccccccccccccccEEEEccccEEEEEcccccccccccccEccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEccccccccccccccEEcccccccccccccccccccccHHHHHHcccccccccc
Coil and Loop (DISEMBL)
magkvaagqpadfeyevfddsdhlRTAVAtsndtnawikpsALKLRHrigrgpfgEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFyegsvgdrmaqlkggklsLSNVFRYAIDLAQGILQLHSKgilvlnlkpfnfilneadravlgdvgiphlllgiplpssdlprrlgtpnymapeqwqpevrgpisfetdswGFACSIIEMLtgvqprcgrsvDEIYDAVVRrqeippipsglppaveNVLLGCFeydlrsrplMTDILRVFksdggwtghgsrilpdksssgytewflskedlkvddvvrsrkppnsfkpenmdvpegrvvgvehntegeSFVLVRVHGIHDPLRVHVSALERVTFglaagdwvrlkeedrrhspvgilhsiqrdgsvaVGFLGLETLWKGHFSELQMAESYCVGQFVrlkanvvspqfewprkregvwatgricmvvpngclivrfpgrltfgeqcssfladpaeVEVVTFntcpgmvkkyqHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSviqkdgqhvdgqvagnpawlppsmanmlskgtsaaagr
Flexible Loop (DISEMBL)
magkvaagqpadfeyevfddsDHLRTAVatsndtnawikpsaLKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLtgvqprcgRSVDEIYDAVVRRQEIppipsglppavENVLLGCFEYDLRSRPLMTDILRVFKsdggwtghgsrilpdksssgytewflskedlkvddvvrsrkppnsfkpenmdvpeGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGilhsiqrdgsVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKAnvvspqfewprkregvwatgriCMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKgtsaaagr
Low Complexity Region (SEG)
MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVgiphlllgiplpSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Disordered region (IsUnstruct)
*************EYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS***********YMA*EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILP****SGYTEWFLSKEDL***************************VGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL*************************************************
Disordered Region (DISOPRED)
*************************************IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKI*****************DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG*****S**PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS*******************************************************************************************TFGLAAGD*******************IQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQF*W***REGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGR*******************************WLPPSMANML**********
Disordered Region (DISEMBL)
********QPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK*******************HVDGQVAGNPAWLPPSMANML**********
Disordered Region (DISPRO)
***********************LRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILP**SSSGYTE*FLSKEDL*VDD*VRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL****************************AWLPPSMANMLSKG*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	620	2.2.26 [Sep-21-2011]
Q9FY48	1625	E3 ubiquitin-protein liga	no	no	0.420	0.160	0.295	3e-29
P51957	841	Serine/threonine-protein	yes	no	0.391	0.288	0.257	7e-14
Q2MHE4	390	Serine/threonine-protein	no	no	0.322	0.512	0.260	1e-13
O14299	1401	MAP kinase kinase kinase	yes	no	0.420	0.186	0.259	1e-13
Q9Z1J2	792	Serine/threonine-protein	yes	no	0.391	0.306	0.261	2e-13
Q5B4Z3	1346	Cytokinesis protein sepH	yes	no	0.364	0.167	0.274	4e-13
Q54XJ4	1495	Probable serine/threonine	yes	no	0.261	0.108	0.327	5e-13
A2QHV0	1336	Cytokinesis protein sepH	yes	no	0.446	0.207	0.266	5e-13
Q5BKK4	418	Serine/threonine-protein	yes	no	0.390	0.578	0.271	7e-13
Q6GPN6	434	Serine/threonine-protein	N/A	no	0.390	0.557	0.274	8e-13

>sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2

 Score =  130 bits (327), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 33/294 (11%)

Query: 43  LKLRHRIGR----GPFG--EVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           +KL  +IG     G FG  E+W AT       C   H VAVK +   ++  +  +  +L 
Sbjct: 137 MKLVRQIGEESSSGGFGGVEMWDATVAGGGGRCK--HRVAVKKMTLTEDMDVEWMQGQLE 194

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
            L         +C   G+  ++G +C++M    GSV   M Q   G+L+L  + RY  D+
Sbjct: 195 SLRRASMWCRNVCTFHGVVKMDGSLCLLMDRCFGSVQSEM-QRNEGRLTLEQILRYGADV 253

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG---- 212
           A+G+ +LH+ G++ +N+KP N +L+ +  AV+ D G+  +L   P      P        
Sbjct: 254 ARGVAELHAAGVICMNIKPSNLLLDASGNAVVSDYGLAPILKK-PTCQKTRPEFDSSKVT 312

Query: 213 --------TPNYMAPEQWQP------EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
                   +P+Y APE W P      E    +S E+D+W F C+++EM TG  P  G S 
Sbjct: 313 LYTDCVTLSPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSR 372

Query: 259 DEIYDAVVRRQEIPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +EI+ AVV+ +++PP     +  G+P  +  ++  C ++    RP    +L  F
Sbjct: 373 EEIFQAVVKARKVPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNAMLATF 426

Mediates E2-dependent protein ubiquitination. Acts as a negative regulator of abscisic acid signaling. Required for ABI5 degradation.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo sapiens GN=NEK4 PE=1 SV=2

 Score = 79.7 bits (195), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 17/260 (6%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G+G +GEV L  H     D  +Y  V  K+       R R   E+   L  + +    +
Sbjct: 12  VGKGSYGEVTLVKH---RRDGKQY--VIKKLNLRNASSRERRAAEQEAQLLSQLKHPNIV 66

Query: 109 CWLQGISVINGKICIIMKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
            + +     +G + I+M F EG  GD   ++ + KG  L  + V  + + +A  +  LH 
Sbjct: 67  TYKESWEGGDGLLYIVMGFCEG--GDLYRKLKEQKGQLLPENQVVEWFVQIAMALQYLHE 124

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
           K IL  +LK  N  L   +   +GD+GI  +L      +S L   +GTP YM+PE +   
Sbjct: 125 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENHCDMASTL---IGTPYYMSPELFS-- 179

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
              P ++++D W   C + EM T       + ++ +   ++  + +PP+P    P +  +
Sbjct: 180 -NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPRDYSPELAEL 237

Query: 286 LLGCFEYDLRSRPLMTDILR 305
           +          RP +  ILR
Sbjct: 238 IRTMLSKRPEERPSVRSILR 257

Seems to act exclusively upon threonine residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 11/211 (5%)

Query: 122 CIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
           CII ++  +G++   + + +   LS+  V R A+D+++G+  LHS+G++  +LK  N +L
Sbjct: 161 CIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLL 220

Query: 181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           N+  R  + D G   L         +    +GT  +MAPE  +     P + + D + F 
Sbjct: 221 NDEMRVKVADFGTSCL----ETQCREAKGNMGTYRWMAPEMIK---EKPYTRKVDVYSFG 273

Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 300
             + E+ T + P  G +  +   AV  + E PP+P+   PA+ +++  C+  +   RP  
Sbjct: 274 IVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDF 333

Query: 301 TDILRVFKSDGGWTGHGSRILPDKSSSGYTE 331
           ++I+ V +        G   LP  S +  T+
Sbjct: 334 SNIVAVLEKYDECVKEG---LPLTSHASLTK 361

Serine/threonine kinase involved in the control of stomatal movement in response to CO(2). Shows a reduced response to ABA or light compared to CO(2).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wis4 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 51/312 (16%)

Query: 17   VFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW----------LATHYLST 66
            VF + D ++ A + SN T  W      +  H +  G FG+V+          LA   +  
Sbjct: 1017 VFRNRDFIKLASSFSNITIRW------QQGHFVRSGMFGDVYTGVNMETGDLLAVKEIKL 1070

Query: 67   EDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK 126
            +D   +     +I + +       +LERLN           +    G+ V   K+ I M+
Sbjct: 1071 QDSRTFRSTVDQIHNEM------TVLERLNH--------PNVVTYYGVEVHREKVYIFME 1116

Query: 127  FYEG-SVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 184
            F +G S+ D +A    G++   NV + Y + L +G+  +HS+ IL  ++KP N +L+   
Sbjct: 1117 FCQGGSLADLLAH---GRIEDENVLKVYVVQLLEGLAYIHSQHILHRDIKPANILLDHRG 1173

Query: 185  RAVLGDVGIPHLLLGIPLPSS----------DLPRRLGTPNYMAPEQWQPEVRGPISFET 234
                 D G     L +  P+           +L    GTP YMAPE      +G      
Sbjct: 1174 MIKYSDFGSA---LYVSPPTDPEVRYEDIQPELQHLAGTPMYMAPEIILGTKKGDFG-AM 1229

Query: 235  DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--LPPAVENVLLGCFEY 292
            D W   C I+EM+TG  P      +      V     P IP    +     + +  CFE 
Sbjct: 1230 DIWSLGCVILEMMTGSTPWSEMDNEWAIMYHVAAMHTPSIPQNEKISSLARDFIEQCFER 1289

Query: 293  DLRSRPLMTDIL 304
            D   RP   D+L
Sbjct: 1290 DPEQRPRAVDLL 1301

Involved in a signal transduction pathway that is activated in under conditions of heat shock, oxidative stress or limited nutrition. Unlike win1, it is not activated by changes in the osmolarity of the extracellular environment. Activates the wis1 MAP kinase kinase by phosphorylation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q9Z1J2|NEK4_MOUSE Serine/threonine-protein kinase Nek4 OS=Mus musculus GN=Nek4 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 17/260 (6%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +GRG +GEV L  H     D  +Y  V  K+       R R   E+   L  + +    +
Sbjct: 12  VGRGSYGEVTLVKH---RRDGKQY--VIKKLNLRNASSRERRAAEQEAQLLSQLKHPNIV 66

Query: 109 CWLQGISVINGKICIIMKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
            + +     +G + I+M F EG  GD   ++ + KG  L  S V  + + +A  +  LH 
Sbjct: 67  TYKESWEGGDGLLYIVMGFCEG--GDLYRKLKEQKGQLLPESQVVEWFVQIAMALQYLHE 124

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
           K IL  +LK  N  L   +   +GD+GI  +L      +S L   +GTP YM+PE +   
Sbjct: 125 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENHGDMASTL---IGTPYYMSPELFS-- 179

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
              P ++++D W   C + EM T       + ++ +   ++  + +PP+P      +  +
Sbjct: 180 -NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPKVYSTELAEL 237

Query: 286 LLGCFEYDLRSRPLMTDILR 305
           +          RP +  ILR
Sbjct: 238 IRTMLSRRPEERPSVRSILR 257

Seems to act exclusively upon threonine residues.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5B4Z3|SEPH_EMENI Cytokinesis protein sepH OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sepH PE=3 SV=2

 Score = 77.0 bits (188), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 22/248 (8%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDLFLKCQGVE 106
           +GRG FG V+ A ++ + E       VAVK   L  + +  +RV++  ++   LK     
Sbjct: 66  LGRGAFGSVYRALNWNTGE------TVAVKQIKLADLPKSELRVIMLEID--LLKNLDHP 117

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            I   QG       + II+++ E      +A+   G+   + V  Y   +  G+L LH +
Sbjct: 118 NIVKYQGFVKSAETLNIILEYCENGSLHSIAK-NFGRFPETLVGVYMSQVLHGLLYLHDQ 176

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
           G++  ++K  N +  +     L D G+     G+   S      +GTP +MAPE    E+
Sbjct: 177 GVIHRDIKGANILTTKEGLVKLADFGVASRTTGLSESSV-----VGTPYWMAPEVI--EL 229

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G  +  +D W   C++IE+L G  P    + +  ++  V    + PP+P G  PAV++ 
Sbjct: 230 SGATT-ASDIWSLGCTVIELLEGKPPYYNLQPMPALFRIV--NDDHPPLPQGASPAVKDF 286

Query: 286 LLGCFEYD 293
           L+ CF+ D
Sbjct: 287 LMQCFQKD 294

Required for early events during cytokinesis including localization of cytoskeletal components to the cytokinetic ring.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 12/174 (6%)

Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 182
           I+M+F E    +++ + + G L  S V  Y   +  G+  LH +G++  ++K  N +++ 
Sbjct: 99  IVMEFIENGSLEKIIK-RHGLLPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLIST 157

Query: 183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRL--GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
                L D G+   +  +   SSD P     GTP +MAPE  Q  ++G IS   D W   
Sbjct: 158 DGSIKLADFGVATKVSDL---SSDNPDDTFAGTPYWMAPEVIQ--MQG-ISTACDVWSLG 211

Query: 241 CSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 293
           C+IIE+LTG  P  G +    +Y  V  +++ PPIP G+  A+++ LL CF+ D
Sbjct: 212 CTIIELLTGTPPYFGLAPAAALYKIV--QEDHPPIPPGISAALKDFLLNCFKKD 263

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2QHV0|SEPH_ASPNC Cytokinesis protein sepH OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sepH PE=3 SV=1

 Score = 76.6 bits (187), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 35/312 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLKCQGVE 106
           +G+G FG V+ A ++ + E       VAVK +  V   +  +RV++  ++   LK     
Sbjct: 65  LGKGAFGSVYRALNWNTGE------TVAVKQIKLVDLPKSELRVIMLEID--LLKNLDHP 116

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            I   QG       + II+++ E      +A+   G+   + V  Y   +  G+L LH +
Sbjct: 117 NIVKYQGFVKSAETLNIILEYCENGSLHSIAK-NFGRFPENLVGLYMSQVLHGLLYLHEQ 175

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
           G++  ++K  N +  +     L D G+     G+   S      +GTP +MAPE    E+
Sbjct: 176 GVIHRDIKGANILTTKEGLVKLADFGVASRTTGLSESSV-----VGTPYWMAPEVI--EL 228

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G  +  +D W   C++IE+L G  P    + +  ++  V    + PP+P G  PAV++ 
Sbjct: 229 SGATT-ASDIWSLGCTVIELLEGKPPYYNLQPMPALFRIV--NDDHPPLPQGASPAVKDF 285

Query: 286 LLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSR---ILPDKSSSGYTEWFLS----KED 338
           L+ CF+ D   R     +L+       W  +  R   ++P KS+  Y E   S     E 
Sbjct: 286 LMQCFQKDPNLRVSARKLLK-----HPWIVNARRSDSVVPKKSTE-YEEAVKSVQEWNEA 339

Query: 339 LKVDDVVRSRKP 350
           L+  D    RKP
Sbjct: 340 LRSPDTGTLRKP 351

Required for early events during cytokinesis including localization of cytoskeletal components to the cytokinetic ring.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5BKK4|SGK1_XENTR Serine/threonine-protein kinase Sgk1 OS=Xenopus tropicalis GN=sgk1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 31/273 (11%)

Query: 34  TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMR 89
           +N   KPS  +    IG+G FG+V LA H     + DE    AVK+L       K++   
Sbjct: 76  SNPHAKPSDFQFLKIIGKGSFGKVLLARH-----NADEKF-YAVKVLQKKAILKKKEEKH 129

Query: 90  VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
           ++ ER  ++ LK      +  L        ++  I+ +  G  G+    L+  +  L   
Sbjct: 130 IMSER--NVLLKNVKHPFLVGLHFSFQTTSRLYFILDYING--GELFYHLQRERCFLEPR 185

Query: 150 FR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
            R YA ++A  +  LHS  I+  +LKP N +L+     +L D G+    +    P+    
Sbjct: 186 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTDFGLCKENIE---PNGTTS 242

Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
              GTP Y+APE      + P     D W     + EML G+ P   R+  E+YD ++ +
Sbjct: 243 TFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 299

Query: 269 QEIPPIPSGLPPAV----ENVLLGCFEYDLRSR 297
                 P  L P +     N+L G  + D   R
Sbjct: 300 ------PLQLKPNITNSARNLLEGLLQKDRTKR 326

Protein kinase that may play an important role in cellular stress response (By similarity). Plays an important role in activating certain potassium, sodium, and chloride channels, suggesting an involvement in the regulation of processes such as cell survival, neuronal excitability, and renal sodium excretion.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6GPN6|SGK1A_XENLA Serine/threonine-protein kinase Sgk1-A OS=Xenopus laevis GN=sgk1-a PE=2 SV=1

 Score = 76.3 bits (186), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 31/273 (11%)

Query: 34  TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMR 89
           +N   KPS  +    IG+G FG+V LA H       DE    AVK+L       K++   
Sbjct: 92  SNPHAKPSDFQFLKIIGKGSFGKVLLARH-----QADEKF-YAVKVLQKKAILKKKEEKH 145

Query: 90  VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
           ++ ER  ++ LK      +  L        ++  I+ +  G  G+    L+  +  L   
Sbjct: 146 IMSER--NVLLKNVKHPFLVGLHFSFQTTSRLYFILDYING--GELFYHLQRERCFLEPR 201

Query: 150 FR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
            R YA ++A  +  LHS  I+  +LKP N +L+     VL D G+    +    P+    
Sbjct: 202 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---PNGTTS 258

Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
              GTP Y+APE      + P     D W     + EML G+ P   R+  E+YD ++ +
Sbjct: 259 TFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 315

Query: 269 QEIPPIPSGLPPAV----ENVLLGCFEYDLRSR 297
                 P  L P +     N+L G  + D   R
Sbjct: 316 ------PLQLKPNITNSARNLLEGLLQKDRTKR 342

Protein kinase that may play an important role in cellular stress response (By similarity). Plays an important role in activating certain potassium, sodium, and chloride channels, suggesting an involvement in the regulation of processes such as cell survival, neuronal excitability, and renal sodium excretion.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	620
255548886	632	protein kinase, putative [Ricinus commun	1.0	0.981	0.688	0.0
296082051	750	unnamed protein product [Vitis vinifera]	0.979	0.809	0.696	0.0
225430314	638	PREDICTED: uncharacterized protein LOC10	0.979	0.951	0.696	0.0
224089274	583	predicted protein [Populus trichocarpa]	0.920	0.979	0.736	0.0
224141907	562	predicted protein [Populus trichocarpa]	0.893	0.985	0.725	0.0
449437150	626	PREDICTED: uncharacterized protein LOC10	0.982	0.972	0.653	0.0
225442924	630	PREDICTED: uncharacterized protein LOC10	0.998	0.982	0.643	0.0
297743474	946	unnamed protein product [Vitis vinifera]	0.922	0.604	0.663	0.0
255553227	658	protein kinase, putative [Ricinus commun	0.993	0.936	0.625	0.0
297798736	612	kinase family protein [Arabidopsis lyrat	0.964	0.977	0.655	0.0

>gi|255548886|ref|XP_002515499.1| protein kinase, putative [Ricinus communis] gi|223545443|gb|EEF46948.1| protein kinase, putative [Ricinus communis]

 Score =  896 bits (2316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/632 (68%), Positives = 523/632 (82%), Gaps = 12/632 (1%)

Query: 1   MAGKVAAGQPA-DFEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MAGKV   QPA  FEYE+F+ D D LRT VA+SN +  WI P  LKLRHRIGRGPFG+VW
Sbjct: 1   MAGKVVPAQPATSFEYELFEGDYDRLRTVVASSNQSTPWIDPENLKLRHRIGRGPFGDVW 60

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LATH+ STED DEYHEVA+K+LHPVKED +RVLL++ +DLFLKC G+EG+C ++GIS+IN
Sbjct: 61  LATHHHSTEDYDEYHEVALKMLHPVKEDHVRVLLDKFDDLFLKCGGIEGVCLIRGISIIN 120

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GKICIIM+FYEGS+GD+MA+ KGGK+SL++V RY I+LAQG+L+LH+K +LVLNLK  NF
Sbjct: 121 GKICIIMRFYEGSIGDKMARRKGGKISLADVLRYGIELAQGVLELHAKDLLVLNLKSSNF 180

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +LNE D+A+LGDVGIP+LLLGIPL SSD+   LGTPNYMAPEQWQPEVRGP+S ETDSWG
Sbjct: 181 LLNENDQAILGDVGIPYLLLGIPLRSSDMSYMLGTPNYMAPEQWQPEVRGPLSAETDSWG 240

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           FAC ++EMLTG+QP  GRSV+EIYD VVR+QE P IP GLPP VENVL  CFEYD R+RP
Sbjct: 241 FACGVVEMLTGIQPWSGRSVEEIYDLVVRKQEKPRIPEGLPPPVENVLHSCFEYDFRNRP 300

Query: 299 LMTDILRVFKS-------DGGWTGHGSRILPDKS-SSGYTEWFLSKEDLKVDDVVRSRKP 350
           LM DILR+FKS       DGGW   GSR + DKS  +GY++WFL K+ L+V D VRSRKP
Sbjct: 301 LMKDILRIFKSSQNAVYGDGGWRELGSRTILDKSGGTGYSKWFLLKDHLQVGDTVRSRKP 360

Query: 351 PNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWV 410
            NS K ENMDVPE  VVG+E + + + F+LVRV GIHDPLRV +  LERVTFGLAAGDWV
Sbjct: 361 LNSSKSENMDVPEAIVVGLERDADQDGFLLVRVLGIHDPLRVPILTLERVTFGLAAGDWV 420

Query: 411 RLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANV 470
           RLKEE++RHSPVGILHSI RDGSVAVGF+G+ET WKG+ SELQMA+SY VGQFVRLKA +
Sbjct: 421 RLKEENKRHSPVGILHSINRDGSVAVGFIGVETFWKGNSSELQMAKSYFVGQFVRLKAKI 480

Query: 471 VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNT 530
           +SP+FEWPRKR+G WATG+I  ++PNGCL+V FPGRLTFGE+ ++FLADP EVE V+FNT
Sbjct: 481 LSPRFEWPRKRQGAWATGKIRHILPNGCLVVNFPGRLTFGEEHNTFLADPGEVEEVSFNT 540

Query: 531 CPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQH 590
           CPGMVKKYQHLED+HWAVRPL IALGLFTAM++G  VG+K+  +K +KL+S+V+Q D Q 
Sbjct: 541 CPGMVKKYQHLEDIHWAVRPLLIALGLFTAMKVGVFVGKKMGRSKGRKLESNVVQNDDQP 600

Query: 591 VDGQVAGNP--AWLPPSMANMLSKGTSAAAGR 620
           + G  +G+   AW PPS+AN+L   T+AA  R
Sbjct: 601 MAGPSSGHSGQAWFPPSVANILGVTTAAAPPR 632

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082051|emb|CBI21056.3| unnamed protein product [Vitis vinifera]

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/619 (69%), Positives = 512/619 (82%), Gaps = 12/619 (1%)

Query: 1   MAGKVAAGQPAD-FEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MAGK AA Q A  FE+E+F+ D DHLRT VAT N  + WI P+ LKLRHRIGRGPFG+VW
Sbjct: 113 MAGKAAATQSAAAFEFELFEGDPDHLRTVVATPNLISPWIDPATLKLRHRIGRGPFGDVW 172

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LAT +L  ED DEYHEVA+K+LHP+KED M+V+L++L +LF KCQG++G+CWL GISVI+
Sbjct: 173 LATQHLFAEDYDEYHEVAIKMLHPIKEDLMKVVLDKLENLFSKCQGLKGVCWLHGISVIS 232

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GKICIIMKFYEGS+GD+MA LKGGKLSL ++ RY IDLAQ IL+LHSK ILVLNLKP+NF
Sbjct: 233 GKICIIMKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNF 292

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +L++ D A+LGD+GIP+LLL IPLPSSD+ RRLGTPNYMAPEQWQPEVRGP+S ETDSWG
Sbjct: 293 LLDQNDEAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWG 352

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           F CSI+EMLTGVQP CG+SV+E++D+VVR+QE P IPSGLPPAVE V++GCF YD RSRP
Sbjct: 353 FGCSIVEMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRP 412

Query: 299 LMTDILRVFK-------SDGGWTGHGSRILPDKS-SSGYTEWFLSKEDLKVDDVVRSRKP 350
            M +IL  FK       SDGGWTG GSR + D    +GY+EWFLSKE+  V D+VRSRKP
Sbjct: 413 SMKNILEAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKP 472

Query: 351 PNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWV 410
           P+S KPENMDVP G VVG+E +++ + +VLVRV GIHDPLRVH   LERVT GLAAGDWV
Sbjct: 473 PHSCKPENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWV 532

Query: 411 RLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANV 470
           RL+ EDRR+S VGILHSI RDGSV VGF+G+ETLWKG  + LQMAESYC GQFVRLKANV
Sbjct: 533 RLETEDRRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANV 592

Query: 471 VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNT 530
           +SP+FEWPRKR G WATGRI  V+PNGCL+V FPGRL  G++CSSFLADPAEVE+V+FNT
Sbjct: 593 LSPRFEWPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNT 652

Query: 531 CPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK--LRGAKAKKLQSSVIQKDG 588
            PG+VKKYQHLED HWAVRPL IALGLF+AM+ G  VG+K  +  +K K+ QS++ Q + 
Sbjct: 653 SPGLVKKYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNES 712

Query: 589 QHVDGQVAGNPAWLPPSMA 607
           Q +D Q AGN AWLP ++A
Sbjct: 713 QRLDNQTAGNAAWLPQTVA 731

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430314|ref|XP_002282747.1| PREDICTED: uncharacterized protein LOC100268069 [Vitis vinifera] gi|147822641|emb|CAN70648.1| hypothetical protein VITISV_025237 [Vitis vinifera]

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/619 (69%), Positives = 512/619 (82%), Gaps = 12/619 (1%)

Query: 1   MAGKVAAGQPAD-FEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MAGK AA Q A  FE+E+F+ D DHLRT VAT N  + WI P+ LKLRHRIGRGPFG+VW
Sbjct: 1   MAGKAAATQSAAAFEFELFEGDPDHLRTVVATPNLISPWIDPATLKLRHRIGRGPFGDVW 60

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LAT +L  ED DEYHEVA+K+LHP+KED M+V+L++L +LF KCQG++G+CWL GISVI+
Sbjct: 61  LATQHLFAEDYDEYHEVAIKMLHPIKEDLMKVVLDKLENLFSKCQGLKGVCWLHGISVIS 120

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GKICIIMKFYEGS+GD+MA LKGGKLSL ++ RY IDLAQ IL+LHSK ILVLNLKP+NF
Sbjct: 121 GKICIIMKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNF 180

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +L++ D A+LGD+GIP+LLL IPLPSSD+ RRLGTPNYMAPEQWQPEVRGP+S ETDSWG
Sbjct: 181 LLDQNDEAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWG 240

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           F CSI+EMLTGVQP CG+SV+E++D+VVR+QE P IPSGLPPAVE V++GCF YD RSRP
Sbjct: 241 FGCSIVEMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRP 300

Query: 299 LMTDILRVFK-------SDGGWTGHGSRILPDKS-SSGYTEWFLSKEDLKVDDVVRSRKP 350
            M +IL  FK       SDGGWTG GSR + D    +GY+EWFLSKE+  V D+VRSRKP
Sbjct: 301 SMKNILEAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKP 360

Query: 351 PNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWV 410
           P+S KPENMDVP G VVG+E +++ + +VLVRV GIHDPLRVH   LERVT GLAAGDWV
Sbjct: 361 PHSCKPENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWV 420

Query: 411 RLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANV 470
           RL+ EDRR+S VGILHSI RDGSV VGF+G+ETLWKG  + LQMAESYC GQFVRLKANV
Sbjct: 421 RLETEDRRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANV 480

Query: 471 VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNT 530
           +SP+FEWPRKR G WATGRI  V+PNGCL+V FPGRL  G++CSSFLADPAEVE+V+FNT
Sbjct: 481 LSPRFEWPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNT 540

Query: 531 CPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK--LRGAKAKKLQSSVIQKDG 588
            PG+VKKYQHLED HWAVRPL IALGLF+AM+ G  VG+K  +  +K K+ QS++ Q + 
Sbjct: 541 SPGLVKKYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNES 600

Query: 589 QHVDGQVAGNPAWLPPSMA 607
           Q +D Q AGN AWLP ++A
Sbjct: 601 QRLDNQTAGNAAWLPQTVA 619

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089274|ref|XP_002308671.1| predicted protein [Populus trichocarpa] gi|222854647|gb|EEE92194.1| predicted protein [Populus trichocarpa]

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/580 (73%), Positives = 498/580 (85%), Gaps = 9/580 (1%)

Query: 1   MAGKVAAGQPAD-FEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWL 59
           MA KV   QP   FE+E+++D DHLRT VA+S+     I P+ LKLRHRIGRGPFG+VWL
Sbjct: 1   MASKVVPAQPVTPFEFELYEDPDHLRTVVASSSQPTPRIDPAKLKLRHRIGRGPFGDVWL 60

Query: 60  ATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING 119
           ATH+ STED DE HEVAVK+LHP+KE+ MRV+L++ ++LF KCQG+E +C+L GISVING
Sbjct: 61  ATHHQSTEDYDECHEVAVKMLHPIKEEHMRVVLDKFDNLFSKCQGIENVCFLHGISVING 120

Query: 120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
           KICI+MKFYEGSVGD+MA+LKGGKLSL +V RY I LAQGI QLH+K ILV NLKP +F+
Sbjct: 121 KICIVMKFYEGSVGDKMARLKGGKLSLPDVLRYGIVLAQGIAQLHAKEILVFNLKPCSFL 180

Query: 180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 239
           LNE D+AVLGDVGIP LL GIPLPS+D+ RRLGTPNYMAPEQWQPE+RGP+SFETDSWGF
Sbjct: 181 LNENDQAVLGDVGIPFLLFGIPLPSADMSRRLGTPNYMAPEQWQPEIRGPVSFETDSWGF 240

Query: 240 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
            CS++EMLTGVQP  G+SV+EIY++VVR+QE P IP GLPP VENVLLGCFEYDLRSRPL
Sbjct: 241 GCSVVEMLTGVQPWRGKSVEEIYESVVRKQEKPRIPEGLPPPVENVLLGCFEYDLRSRPL 300

Query: 300 MTDILRVFKS-------DGGWTGHGSRILPDK-SSSGYTEWFLSKEDLKVDDVVRSRKPP 351
           MTDI+RVFKS       DGGWTG GSR   +K S +GYTEWFLSK+ L+V D+VRSR+PP
Sbjct: 301 MTDIVRVFKSSQNAVFVDGGWTGFGSRTTLEKFSGTGYTEWFLSKDHLQVGDMVRSRRPP 360

Query: 352 NSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVR 411
           NS KPENMDVPEG VVG+E + + + FVLVRVHGIHDPLR+ VS LERVTFGLAAGDWV 
Sbjct: 361 NSCKPENMDVPEGTVVGLERDPDRDGFVLVRVHGIHDPLRLPVSTLERVTFGLAAGDWVH 420

Query: 412 LKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVV 471
           LKEEDRRHSPVGILHSI+RDGSVAVGF+G+ETLWKG+ SELQMAE Y VGQFVR +ANV+
Sbjct: 421 LKEEDRRHSPVGILHSIKRDGSVAVGFIGVETLWKGNSSELQMAEPYFVGQFVRPRANVL 480

Query: 472 SPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTC 531
           SP+FEWPRK  G WATGRI  ++PNGCLIV+FPGRLT G++ SSFLADPAEVEVV+FN+C
Sbjct: 481 SPRFEWPRKTGGAWATGRIWWILPNGCLIVKFPGRLTIGQENSSFLADPAEVEVVSFNSC 540

Query: 532 PGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL 571
           PG+VKKYQH ED HWAVRPL IALG+FTAM++GF VG+K+
Sbjct: 541 PGVVKKYQHFEDFHWAVRPLVIALGIFTAMKVGFFVGKKI 580

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141907|ref|XP_002324302.1| predicted protein [Populus trichocarpa] gi|222865736|gb|EEF02867.1| predicted protein [Populus trichocarpa]

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/562 (72%), Positives = 485/562 (86%), Gaps = 8/562 (1%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           LKLRHRIGRGPFG+VWLATH+ STED DEYHEVAVK+L P+KE+ MR++L++ + LF KC
Sbjct: 1   LKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAVKMLQPLKEEHMRLVLDKFDGLFSKC 60

Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
           QGVE +C+L GISV+NGKICI+MKFYEGS+GD+MA LKGGKL+L +V RY I+LAQGI +
Sbjct: 61  QGVENVCFLHGISVMNGKICIVMKFYEGSIGDKMALLKGGKLTLPDVLRYGIELAQGIAE 120

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW 222
           LH+K ILVLNLKP +F+LNE D+AVLGD+GIP+LL GIPL SSD+P RLGTPNYMAPEQW
Sbjct: 121 LHAKEILVLNLKPCSFLLNENDQAVLGDIGIPYLLFGIPLTSSDMPWRLGTPNYMAPEQW 180

Query: 223 QPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
           QPE+RGPIS ETDSWGF CSI+EMLTGV P CG+S++EIYD+VVR+QE P IP GLPP V
Sbjct: 181 QPEIRGPISSETDSWGFGCSIVEMLTGVLPWCGKSIEEIYDSVVRKQEKPHIPEGLPPPV 240

Query: 283 ENVLLGCFEYDLRSRPLMTDILRVFKS-------DGGWTGHGSRILPDKSS-SGYTEWFL 334
           EN+LLGCFEYDLRSRPLMTDILRVFKS       DGGWTG GSR + +KSS +GYTEWFL
Sbjct: 241 ENILLGCFEYDLRSRPLMTDILRVFKSSQNAVFVDGGWTGFGSRTILEKSSGAGYTEWFL 300

Query: 335 SKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHV 394
           SK+ L+V D+VRSR+PPNS KPENMDVPEG VVG+E N + + FVLV VHGIHDPLR+ V
Sbjct: 301 SKDHLQVGDMVRSRRPPNSCKPENMDVPEGTVVGLERNPDRDGFVLVSVHGIHDPLRLPV 360

Query: 395 SALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQM 454
           S LE+V+FGLAAGDWV LKEE+ +HSPVGILHSI RDGSVAVGF+G+ETLWKG +SELQM
Sbjct: 361 STLEKVSFGLAAGDWVHLKEENNKHSPVGILHSINRDGSVAVGFIGVETLWKGKYSELQM 420

Query: 455 AESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCS 514
           AESY VGQFVRLK NV+SP+FEWPRK  G WATG+I  ++PNGCLIV+FPGR T G++ S
Sbjct: 421 AESYFVGQFVRLKTNVLSPRFEWPRKTGGAWATGKIWWILPNGCLIVKFPGRFTIGQENS 480

Query: 515 SFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGA 574
           SFLADPAEVEVV+FNTCPG+VKKYQHLED HWAVRPL IALG+FTAM++GF  G+K+R +
Sbjct: 481 SFLADPAEVEVVSFNTCPGVVKKYQHLEDFHWAVRPLVIALGIFTAMKVGFFTGKKIRRS 540

Query: 575 KAKKLQSSVIQKDGQHVDGQVA 596
           +  + + + +Q +GQ+ DGQ +
Sbjct: 541 RVNRPRGNAVQSNGQYTDGQTS 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437150|ref|XP_004136355.1| PREDICTED: uncharacterized protein LOC101208616 [Cucumis sativus] gi|449525714|ref|XP_004169861.1| PREDICTED: uncharacterized LOC101208616 [Cucumis sativus]

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/617 (65%), Positives = 512/617 (82%), Gaps = 8/617 (1%)

Query: 1   MAGKVAAGQPA-DFEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           M+ + AA QP   FEYE+ D D+DH+RT VA+SN ++  I+PS +KLRHRIGRG FG+VW
Sbjct: 1   MSTQEAASQPVPSFEYELLDGDTDHVRTVVASSNYSSPRIEPSKVKLRHRIGRGVFGDVW 60

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LATH+ ST+D DEYHEVAVK+L+PVKED MRV+L++L D F KCQ  +G+C L G+S+I 
Sbjct: 61  LATHHQSTKDYDEYHEVAVKMLNPVKEDHMRVVLDKLEDRFYKCQAAKGVCRLYGVSIIG 120

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GK+CIIMKFYEGS+ D+MA+LK GKLS  +V RY I+LAQGI +LHSK ILVLN+KP N 
Sbjct: 121 GKLCIIMKFYEGSIADKMARLKDGKLSPPDVLRYGINLAQGIFELHSKEILVLNMKPSNM 180

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +L   D+A+LGD+GIP LL  +P+P+SD+ +RLGTPNYMAPEQWQPEVRGPIS+ETDSWG
Sbjct: 181 LLTTKDQAILGDIGIPFLLHSVPIPNSDIVQRLGTPNYMAPEQWQPEVRGPISYETDSWG 240

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           FAC IIEMLTGVQP  G+SVDEI+ +VVR+QE P IPSGLPP +ENVLLGCFEYDLRSRP
Sbjct: 241 FACCIIEMLTGVQPWRGKSVDEIFHSVVRKQEKPCIPSGLPPLIENVLLGCFEYDLRSRP 300

Query: 299 LMTDILRVFKS----DGGWTGHG-SRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNS 353
           LMTDIL VF+S    +G W   G S++L   S++G+TEWFLSK+ L+V+D+VRSRKP NS
Sbjct: 301 LMTDILNVFQSFQHVNGDWQAIGSSKVLNKSSATGHTEWFLSKDHLQVNDLVRSRKPLNS 360

Query: 354 FKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLK 413
            K +NM++PEG++VG+E  TE ++FVLVRV GIHDP+RV+ S LERV+FGLAAGDW+RLK
Sbjct: 361 CKSDNMNIPEGKIVGLEGETEKDAFVLVRVRGIHDPVRVYASTLERVSFGLAAGDWIRLK 420

Query: 414 EEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSP 473
           E D++HSPVGILHSI R G+VAV F+G+ETLWKG+ S+ QMAES+CVGQFVR+KA+++ P
Sbjct: 421 EADKKHSPVGILHSIDRVGNVAVAFIGVETLWKGNSSQFQMAESFCVGQFVRIKASILRP 480

Query: 474 QFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPG 533
           +FEW RK+  VWATG+I  ++PNGCL+V+FPG L+F E+C+S++ADPAEVEVV F+TCPG
Sbjct: 481 RFEWLRKKGSVWATGKIWWILPNGCLMVKFPGILSFKEECNSYMADPAEVEVVNFSTCPG 540

Query: 534 MVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDG 593
           MVKKYQHLED HW+VRP+ IA G+FTAM++G + G+  R +K KK QS+++  + QHV+G
Sbjct: 541 MVKKYQHLEDFHWSVRPILIAFGMFTAMKLGIAFGKVGR-SKVKKGQSNLVYCESQHVEG 599

Query: 594 QVAGNPAWLPPSMANML 610
           Q   NPAW+PP + N+L
Sbjct: 600 QNTNNPAWIPPPVKNIL 616

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442924|ref|XP_002265172.1| PREDICTED: uncharacterized protein LOC100268161 isoform 1 [Vitis vinifera] gi|359482371|ref|XP_003632763.1| PREDICTED: uncharacterized protein LOC100268161 isoform 2 [Vitis vinifera]

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/631 (64%), Positives = 499/631 (79%), Gaps = 12/631 (1%)

Query: 1   MAGKV-AAGQPADFEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MA K+ AA  PA FEYE+F+ D DHLRT  ATS   + WI P++LKL+HRIGRG FG+VW
Sbjct: 1   MAEKIGAAPPPASFEYELFEGDPDHLRTVAATSTQLSPWIDPASLKLKHRIGRGLFGDVW 60

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LATH+ S +D DEYHEVAVK+LH ++ED M++ L++   +FLKC+ ++G+CWL GIS+  
Sbjct: 61  LATHHQSADDYDEYHEVAVKMLHTIREDHMQMFLDKFAGIFLKCRQLKGVCWLHGISIKT 120

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GK+CI MKFYEGSVGDRMA LKGGKL LS+V RY I+LA+GI++LHS G+LVLNLKP NF
Sbjct: 121 GKVCIAMKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNF 180

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +LNE D+ VLGD+GIP+LLLGIPLP+ D+  RLGTPNYMAPEQW+PEVRGPIS ETD+WG
Sbjct: 181 LLNEHDQVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWG 240

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           F CSI+EMLTGVQP CGRS++EIY +VV +QE P IPSGLPP VENVL GCFEYDLR+RP
Sbjct: 241 FGCSIVEMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRP 300

Query: 299 LMTDILRVFK-------SDGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKP 350
           LM DIL+ F+       SDGGW G  SR   ++S+S GYT WFLSK+ L V D+VRSRKP
Sbjct: 301 LMVDILQAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKP 360

Query: 351 PNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWV 410
            N+ KP+ MDVPEG VVG + + + + FVLV++ G H+PLRVHVS LERVT GL   DWV
Sbjct: 361 LNACKPQIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWV 420

Query: 411 RLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANV 470
           RLKE +R+HS VGILHS+QRDGSVAVGFLGLETLW+GH SELQMAE+Y VGQFVRLK NV
Sbjct: 421 RLKEPNRKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNV 480

Query: 471 VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNT 530
            +P+F+WPRK+ G W TGRI  V+PNGCL+VRFPGR  FG + +SFLADPAEVE+V+F+ 
Sbjct: 481 FTPRFDWPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDK 540

Query: 531 CPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQH 590
           C G+V+KY H+ED HWAVRPL IA G+FT +++G  VG  +   + +K   ++   DGQ 
Sbjct: 541 CHGVVEKYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNV-CVRMRKSPRNLTPNDGQC 599

Query: 591 VDGQVAGNPAWLPPSMANMLSK-GTSAAAGR 620
            DGQ  GNPAW+PP++AN+L + G   A  R
Sbjct: 600 QDGQAGGNPAWIPPTVANILFREGPPTATAR 630

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743474|emb|CBI36341.3| unnamed protein product [Vitis vinifera]

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/582 (66%), Positives = 471/582 (80%), Gaps = 10/582 (1%)

Query: 1   MAGKV-AAGQPADFEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MA K+ AA  PA FEYE+F+ D DHLRT  ATS   + WI P++LKL+HRIGRG FG+VW
Sbjct: 74  MAEKIGAAPPPASFEYELFEGDPDHLRTVAATSTQLSPWIDPASLKLKHRIGRGLFGDVW 133

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LATH+ S +D DEYHEVAVK+LH ++ED M++ L++   +FLKC+ ++G+CWL GIS+  
Sbjct: 134 LATHHQSADDYDEYHEVAVKMLHTIREDHMQMFLDKFAGIFLKCRQLKGVCWLHGISIKT 193

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           GK+CI MKFYEGSVGDRMA LKGGKL LS+V RY I+LA+GI++LHS G+LVLNLKP NF
Sbjct: 194 GKVCIAMKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNF 253

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +LNE D+ VLGD+GIP+LLLGIPLP+ D+  RLGTPNYMAPEQW+PEVRGPIS ETD+WG
Sbjct: 254 LLNEHDQVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWG 313

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           F CSI+EMLTGVQP CGRS++EIY +VV +QE P IPSGLPP VENVL GCFEYDLR+RP
Sbjct: 314 FGCSIVEMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRP 373

Query: 299 LMTDILRVFK-------SDGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKP 350
           LM DIL+ F+       SDGGW G  SR   ++S+S GYT WFLSK+ L V D+VRSRKP
Sbjct: 374 LMVDILQAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKP 433

Query: 351 PNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWV 410
            N+ KP+ MDVPEG VVG + + + + FVLV++ G H+PLRVHVS LERVT GL   DWV
Sbjct: 434 LNACKPQIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWV 493

Query: 411 RLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANV 470
           RLKE +R+HS VGILHS+QRDGSVAVGFLGLETLW+GH SELQMAE+Y VGQFVRLK NV
Sbjct: 494 RLKEPNRKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNV 553

Query: 471 VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNT 530
            +P+F+WPRK+ G W TGRI  V+PNGCL+VRFPGR  FG + +SFLADPAEVE+V+F+ 
Sbjct: 554 FTPRFDWPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDK 613

Query: 531 CPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLR 572
           C G+V+KY H+ED HWAVRPL IA G+FT +++G  VG  ++
Sbjct: 614 CHGVVEKYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNVK 655

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553227|ref|XP_002517656.1| protein kinase, putative [Ricinus communis] gi|223543288|gb|EEF44820.1| protein kinase, putative [Ricinus communis]

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/630 (62%), Positives = 489/630 (77%), Gaps = 14/630 (2%)

Query: 1   MAGKVAAGQPA-DFEYEVFD-DSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVW 58
           MA K+   +PA  FEY +F+ D DHLRT VAT    + WI+P+ LKL+HRIGRG FG+VW
Sbjct: 33  MAEKIRVPEPATSFEYMLFEGDPDHLRTVVATPTQISPWIEPAELKLKHRIGRGIFGDVW 92

Query: 59  LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
           LATH+ S++D DEYHEVAVK+LHP+KED  ++ +++   LFLKC+ + G+ WL GIS++N
Sbjct: 93  LATHHQSSDDFDEYHEVAVKMLHPLKEDLTQIFVDKFEKLFLKCREILGVGWLHGISIMN 152

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           G+ICI MKFY+GS+ DR+A +KGGKL LS++ RY IDLA+GI +LHS G+LVLNLKP NF
Sbjct: 153 GQICIAMKFYKGSIADRIALVKGGKLQLSDILRYGIDLAKGIQELHSIGLLVLNLKPSNF 212

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           ++NE D AVLGD GI  LL GIPL +S++  RLGTPNYMAPEQW+PEVRGPISFETDSWG
Sbjct: 213 LINEHDHAVLGDFGISFLLHGIPLLNSEMALRLGTPNYMAPEQWEPEVRGPISFETDSWG 272

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           F CSI+EMLTGVQP  G+S++EIY +VV +QE P IP+GLPPAVENVL GCF+YDLR+RP
Sbjct: 273 FGCSIVEMLTGVQPFFGKSIEEIYQSVVIKQETPQIPNGLPPAVENVLGGCFQYDLRNRP 332

Query: 299 LMTDILRVFKSDG-------GWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPP 351
           LM D+L  F S         GW G  SR L  KSS  YT W+LS+++L++ D VRSRKP 
Sbjct: 333 LMEDVLHAFHSSQNAVNSGEGWVGLESRALSGKSSGSYTAWYLSRDNLQLGDTVRSRKPL 392

Query: 352 NSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVR 411
           N+ KP+ MDVP+G +VG + N +   FVLV+V G+H+PLRV  S LERVTFG A GDWV 
Sbjct: 393 NACKPQTMDVPKGTLVGPDSNDDRNGFVLVKVAGLHNPLRVQESTLERVTFGFAEGDWVY 452

Query: 412 LKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVV 471
           LKEE   HSPVGILHS+QRDG VAVGF+GLETLW G +S+LQMA++Y VGQFVRLKAN+V
Sbjct: 453 LKEETSMHSPVGILHSVQRDGGVAVGFVGLETLWMGTYSDLQMAKAYYVGQFVRLKANLV 512

Query: 472 SPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTC 531
           + +F+WPRKR G WATGRI  V+ NGCLIV FPGRL FG++ ++FLADPAEVEVV+F+TC
Sbjct: 513 TARFKWPRKRGGGWATGRISQVLSNGCLIVSFPGRLVFGDESNTFLADPAEVEVVSFDTC 572

Query: 532 PGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHV 591
           PG+++KYQH+ED HW+VRPL IALGLFTAM++  SVGR +    + KL+      +G   
Sbjct: 573 PGVMEKYQHVEDFHWSVRPLAIALGLFTAMKLTLSVGRSI----STKLRKGRKSGEGHSQ 628

Query: 592 DGQVAGNPAWLPPSMANMLSK-GTSAAAGR 620
           DGQ  GN AWLPP +AN+L K G  AA  R
Sbjct: 629 DGQGGGNAAWLPPPVANILFKEGVPAATVR 658

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798736|ref|XP_002867252.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313088|gb|EFH43511.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/612 (65%), Positives = 482/612 (78%), Gaps = 14/612 (2%)

Query: 1   MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLA 60
           MA K+ AG+P D EYE+ +       A  TS     W+  S LKLRHRIGRGPFG+VWLA
Sbjct: 1   MASKIIAGKPDDSEYEIIEGESESALAAGTS----PWMNSSTLKLRHRIGRGPFGDVWLA 56

Query: 61  THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK 120
           TH+ STED DE+HEVA+K+LHP+KED+ RV++++  DLF KCQGVE +C L+G+S I+GK
Sbjct: 57  THHQSTEDYDEHHEVAIKMLHPIKEDQRRVVVDKFEDLFSKCQGVENVCLLRGVSSISGK 116

Query: 121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
           ICIIMKFYEGSVGD+MA+LKGGKLSL +V RY +DLA GIL+LHSKG L+LNLKP NF+L
Sbjct: 117 ICIIMKFYEGSVGDKMARLKGGKLSLPDVLRYGVDLATGILELHSKGFLILNLKPSNFLL 176

Query: 181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           ++ D+AVLGDVGIP+LLL IPLPSSD+  RLGTP+YMAPEQWQPEVRGP+SFETDSWGF 
Sbjct: 177 SDNDKAVLGDVGIPYLLLSIPLPSSDMTVRLGTPSYMAPEQWQPEVRGPMSFETDSWGFG 236

Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 300
           CSI+EMLTGVQP  GRS DEIYD VVR+QE   IP+ +PP ++N+L GCF YDLRSRP M
Sbjct: 237 CSIVEMLTGVQPWSGRSADEIYDLVVRKQEKLSIPNTIPPPLDNLLRGCFMYDLRSRPSM 296

Query: 301 TDILRVFKS------DGGWTGHGSR-ILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNS 353
           TDIL V KS      +  W G  SR I+    + GYTEWFLSK+ L+V D VRSRKP NS
Sbjct: 297 TDILLVLKSLQSLEEEQVWRGIDSREIMKSSGTLGYTEWFLSKDHLQVGDTVRSRKPANS 356

Query: 354 FKPENMDVPEGRVVGVEHN-TEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRL 412
            K ENMDVPEG VVG+E + T+ + F+LV+VHG+HDPLRVHVS LERVT GLA+GDWVRL
Sbjct: 357 CKHENMDVPEGIVVGLERDTTDPDGFMLVKVHGVHDPLRVHVSVLERVTSGLASGDWVRL 416

Query: 413 K-EEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVV 471
           K  +D+RHSPVG+LHSI R+G+VAVGF+GL TLWKG  S+LQMA++Y VGQFV+LK NVV
Sbjct: 417 KVRKDKRHSPVGVLHSIDREGNVAVGFIGLPTLWKGTSSQLQMAKAYSVGQFVKLKTNVV 476

Query: 472 SPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTC 531
            P+F+W RK  G+WATGRI  V+PNGCL V FPG L FGE+  S LADPAEVE+V FNTC
Sbjct: 477 IPRFKWMRKSRGIWATGRISQVLPNGCLEVDFPGVLPFGEEHGSCLADPAEVEIVNFNTC 536

Query: 532 PGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL-RGAKAKKLQSSVIQKDGQH 590
            G+VKKYQHLED+HWAVRPL IA+GL TAM++GF VG+K+ R    K+   S  Q D + 
Sbjct: 537 QGVVKKYQHLEDIHWAVRPLLIAMGLLTAMKLGFFVGKKIGRSKDGKQRDGSSGQDDCKI 596

Query: 591 VDGQVAGNPAWL 602
            DG+ +G   WL
Sbjct: 597 PDGKGSGKSKWL 608

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	620
TAIR|locus:2116545	611	AT4G32250 [Arabidopsis thalian	0.964	0.978	0.629	1.8e-206
TAIR|locus:2185061	1625	KEG "AT5G13530" [Arabidopsis t	0.404	0.154	0.273	9.2e-21
TAIR|locus:2121154	575	STY46 "serine/threonine/tyrosi	0.461	0.497	0.256	1.2e-13
WB|WBGene00003472	1420	mtk-1 [Caenorhabditis elegans	0.479	0.209	0.239	5.8e-13
TAIR|locus:2827943	546	STY8 "serine/threonine/tyrosin	0.419	0.476	0.244	1.7e-12
TAIR|locus:2077417	1367	MAPKKK6 "mitogen-activated pro	0.477	0.216	0.254	1.9e-12
UNIPROTKB|E1C5S2	786	NEK4 "Uncharacterized protein"	0.395	0.311	0.240	2.4e-12
TAIR|locus:2092890	1368	MAPKKK7 "mitogen-activated pro	0.387	0.175	0.273	2.5e-12
UNIPROTKB|E1BWZ5	838	NEK4 "Uncharacterized protein"	0.395	0.292	0.240	2.7e-12
POMBASE|SPAC9G1.02	1401	wis4 "MAP kinase kinase kinase	0.451	0.199	0.255	5.4e-12

TAIR|locus:2116545 AT4G32250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
 Identities = 385/612 (62%), Positives = 467/612 (76%)

Query:     1 MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLA 60
             MA K+ AG+P D EYE+ +       A  TS     W+  S LKLRHRIGRGPFG+VWLA
Sbjct:     1 MASKIIAGKPDDTEYEIIEGESESALAAGTS----PWMNSSTLKLRHRIGRGPFGDVWLA 56

Query:    61 THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK 120
             TH+ STED DE+HEVA+K+L+P+KED+ RV++++  DLF KCQG+E +C L+G+S INGK
Sbjct:    57 THHQSTEDYDEHHEVAIKMLYPIKEDQRRVVVDKFEDLFSKCQGLENVCLLRGVSSINGK 116

Query:   121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
             IC++MKFYEGS+GD+MA+LKGGKLSL +V RY +DLA GIL+LHSKG L+LNLKP NF+L
Sbjct:   117 ICVVMKFYEGSLGDKMARLKGGKLSLPDVLRYGVDLATGILELHSKGFLILNLKPSNFLL 176

Query:   181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
             ++ D+A+LGDV            SSD+  RLGTPNYMAPEQWQP+VRGP+SFETDSWGF 
Sbjct:   177 SDNDKAILGDVGIPYLLLSIPLPSSDMTERLGTPNYMAPEQWQPDVRGPMSFETDSWGFG 236

Query:   241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 300
             CSI+EMLTGVQP  GRS DEIYD VVR+QE   IPS +PP +EN+L GCF YDLRSRP M
Sbjct:   237 CSIVEMLTGVQPWSGRSADEIYDLVVRKQEKLSIPSSIPPPLENLLRGCFMYDLRSRPSM 296

Query:   301 TDILRVFKS------DGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKPPNS 353
             TDIL V KS      +    G  SR +   S++ GYTEWFLSK+ L+V D VRSRKP NS
Sbjct:   297 TDILLVLKSLQNSEEEQVRRGIDSREIRKSSATLGYTEWFLSKDHLQVRDTVRSRKPANS 356

Query:   354 FKPENMDVPEGRVVGVEHN-TEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRL 412
              K ENMDVPEG VVG+E + T+ + FVLV+VHG+HDPLRVHVS LERVT GLA+GDWVRL
Sbjct:   357 CKHENMDVPEGMVVGLERDSTDPDGFVLVKVHGVHDPLRVHVSVLERVTNGLASGDWVRL 416

Query:   413 K-EEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVV 471
             K  +D+RHSPVG+LHSI R+G+VAVGF+GL TLWKG  S+LQMA+ Y VGQFV+LKANVV
Sbjct:   417 KVRKDKRHSPVGVLHSIDREGNVAVGFIGLPTLWKGTSSQLQMAKVYSVGQFVKLKANVV 476

Query:   472 SPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTC 531
              P+F+W RK  G+WATGRI  V+PNGCL V FPG L FGE+  S+LADPAEVE+V FNTC
Sbjct:   477 IPRFKWMRKGRGIWATGRISQVLPNGCLEVDFPGMLPFGEEHGSYLADPAEVEIVNFNTC 536

Query:   532 PGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL-RGAKAKKLQSSVIQKDGQH 590
              G V+KYQHLED HWAVRPL IA+GL TAM++G  V +K+ R    K+   S  Q D + 
Sbjct:   537 QGAVEKYQHLEDFHWAVRPLLIAMGLLTAMKLGICVRKKIGRSKDGKQRDGSTGQGDCKI 596

Query:   591 VDGQVAGNPAWL 602
              DG+ +    WL
Sbjct:   597 PDGKGSDKSKWL 608

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2185061 KEG "AT5G13530" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
 Identities = 77/282 (27%), Positives = 126/282 (44%)

Query:    52 GPFG--EVWLATHYLSTEDCDEYHEVAVK---ILHPVKEDRMRVLLERLNDLFLKCQGVE 106
             G FG  E+W AT       C   H VAVK   +   +  + M+  LE L    + C+ V 
Sbjct:   150 GGFGGVEMWDATVAGGGGRCK--HRVAVKKMTLTEDMDVEWMQGQLESLRRASMWCRNV- 206

Query:   107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGG-KLSL-----SNVFRYAIDL-AQG 159
               C   G+  ++G +C++M    GSV   M + +G   L       ++V R   +L A G
Sbjct:   207 --CTFHGVVKMDGSLCLLMDRCFGSVQSEMQRNEGRLTLEQILRYGADVARGVAELHAAG 264

Query:   160 ILQLHSKGILVLNLKPFNFILNEADRA-VLGDVXXXXXXXXXXXXSSDLPRRLGT--PNY 216
             ++ ++ K   +L     N ++++   A +L                  L     T  P+Y
Sbjct:   265 VICMNIKPSNLLLDASGNAVVSDYGLAPILKKPTCQKTRPEFDSSKVTLYTDCVTLSPHY 324

Query:   217 MAPEQWQP------EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
              APE W P      E    +S E+D+W F C+++EM TG  P  G S +EI+ AVV+ ++
Sbjct:   325 TAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSREEIFQAVVKARK 384

Query:   271 IPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
             +PP     +  G+P  +  ++  C ++    RP    +L  F
Sbjct:   385 VPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNAMLATF 426

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IGI;IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0048589 "developmental growth" evidence=IMP

GO:0006952 "defense response" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0005769 "early endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0043621 "protein self-association" evidence=IPI

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0016197 "endosomal transport" evidence=IMP

GO:0032940 "secretion by cell" evidence=IMP

TAIR|locus:2121154 STY46 "serine/threonine/tyrosine kinase 46" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 79/308 (25%), Positives = 138/308 (44%)

Query:    25 RTAVATSND-TNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP 82
             RT V   ND T+ W I    LK  H+I  G +G+++  T+      C +  EVA+K+L P
Sbjct:   270 RTHVPIPNDGTDVWEINLKHLKFGHKIASGSYGDLYKGTY------CSQ--EVAIKVLKP 321

Query:    83 VKEDRMRVLLERLNDLFLKCQ-GVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLK 140
              + D   +  E   ++F+  +   + +    G       +CI+ +F  G SV D + + K
Sbjct:   322 ERLDS-DLEKEFAQEVFIMRKVRHKNVVQFIGACTKPPHLCIVTEFMPGGSVYDYLHKQK 380

Query:   141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             G    L  +F+ AID+ +G+  LH   I+  +LK  N +++E +   + D          
Sbjct:   381 G-VFKLPTLFKVAIDICKGMSYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQT 439

Query:   201 XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
                +++     GT  +MAPE  + +   P   + D + +   + E+LTG  P    +  +
Sbjct:   440 GVMTAET----GTYRWMAPEVIEHK---PYDHKADVFSYGIVLWELLTGKLPYEYMTPLQ 492

Query:   261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRI 320
                 VV++   P IP    P +  +L   +E+D   RP  ++I+   +      G     
Sbjct:   493 AAVGVVQKGLRPTIPKNTHPKLAELLERLWEHDSTQRPDFSEIIEQLQEIAKEVGEEGEE 552

Query:   321 LPDKSSSG 328
                KSS+G
Sbjct:   553 -KKKSSTG 559

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

WB|WBGene00003472 mtk-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 209 (78.6 bits), Expect = 5.8e-13, P = 5.8e-13
 Identities = 77/321 (23%), Positives = 132/321 (41%)

Query:    16 EVFDDSDHLRTAVATSNDTNAWIK-PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHE 74
             +V  D +     +AT  D     K P    L   I  G FG V  A       D D +  
Sbjct:  1099 KVITDDNRRNFVLAT--DKKITTKAPFQWALLDHIASGSFGSVHRAM------DIDSHRV 1150

Query:    75 VAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD 134
             +A K++  ++ +  + +   +N +F +    E +    G+ V +  + I M++      +
Sbjct:  1151 IAAKVMR-IQRENHKAIESEIN-IFRQLIH-ENLVKYYGVQVEDSDVIIFMEYCSQGTLE 1207

Query:   135 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 194
             R+     GK+ L  V +Y   L + +  LHS  I+  ++KP N  L++     LGD    
Sbjct:  1208 RICH---GKMDLKMVRQYTNSLLRAVQYLHSHKIIHRDIKPANIFLDKCTVLKLGDFGCS 1264

Query:   195 XXXXXXXXXSSDLPRRLGTPNYMAPEQW----QPEVRGPISF---ETDSWGFACSIIEML 247
                        +     GTP +MAPE +    + E  G  S      D W    +++ M+
Sbjct:  1265 SRLVESSTVYGEFQTTAGTPQFMAPEIYSYGEKDETTGSYSGYGRSVDIWALGATVVNMM 1324

Query:   248 TGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
             TG  P  G++  +I  A+  R++ P  P  +   P V+     CFE+    RP   ++L+
Sbjct:  1325 TGKVPFEGQTRHQIAFALCFRKQKPTYPDIADKRPDVKRFFDNCFEFLPNDRPTAAELLQ 1384

Query:   306 VFKSDGGWTGHGSRILPDKSS 326
                ++   T      +PD  S
Sbjct:  1385 TTFANVNITFQDENHIPDYQS 1405

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0016246 "RNA interference" evidence=IMP

TAIR|locus:2827943 STY8 "serine/threonine/tyrosine kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 69/282 (24%), Positives = 133/282 (47%)

Query:    31 SNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR 89
             ++ T+ W I  + LK+  ++  G +G++   T+      C +  EVA+K L P + +   
Sbjct:   273 TDGTDEWEIDVTQLKIEKKVASGSYGDLHRGTY------CSQ--EVAIKFLKPDRVNN-E 323

Query:    90 VLLERLNDLFL--KCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSL 146
             +L E   ++F+  K +    + +L G    +  +CI+ +F   GS+ D + + K     L
Sbjct:   324 MLREFSQEVFIMRKVRHKNVVQFL-GACTRSPTLCIVTEFMARGSIYDFLHKQKCA-FKL 381

Query:   147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD 206
               + + A+D+A+G+  LH   I+  +LK  N +++E     + D             +++
Sbjct:   382 QTLLKVALDVAKGMSYLHQNNIIHRDLKTANLLMDEHGLVKVADFGVARVQIESGVMTAE 441

Query:   207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
                  GT  +MAPE  + +   P + + D + +A  + E+LTG  P    +  +    VV
Sbjct:   442 T----GTYRWMAPEVIEHK---PYNHKADVFSYAIVLWELLTGDIPYAFLTPLQAAVGVV 494

Query:   267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
             ++   P IP    P V+ +L  C+  D   RPL  +I+ + +
Sbjct:   495 QKGLRPKIPKKTHPKVKGLLERCWHQDPEQRPLFEEIIEMLQ 536

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IGI

GO:0007015 "actin filament organization" evidence=RCA

TAIR|locus:2077417 MAPKKK6 "mitogen-activated protein kinase kinase kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 82/322 (25%), Positives = 142/322 (44%)

Query:    45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDLFLKC 102
             L   IG+G +G V++    L  E+ D    VA+K   L  + ++ +  +++ + DL LK 
Sbjct:    22 LGDEIGKGAYGRVYIG---LDLENGDF---VAIKQVSLENIGQEDLNTIMQEI-DL-LKN 73

Query:   103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                + I    G       + II+++ E GS+ + +   K G    S V  Y   + +G++
Sbjct:    74 LNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVTVYIAQVLEGLV 133

Query:   162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
              LH +G++  ++K  N +  +     L D             +  +   +GTP +MAPE 
Sbjct:   134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADFNTHSV---VGTPYWMAPEV 190

Query:   222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPP 280
                E+ G +   +D W   C+IIE+LT V P    + +  +Y  V  + + PPIP  L P
Sbjct:   191 I--ELSG-VCAASDIWSVGCTIIELLTCVPPYYDLQPMPALYRIV--QDDTPPIPDSLSP 245

Query:   281 AVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLK 340
              + + L  CF+ D R RP    +L        W  +  R L        T  ++ + D  
Sbjct:   246 DITDFLRLCFKKDSRQRPDAKTLL-----SHPWIRNSRRALRSSLRHSGTIRYMKETDSS 300

Query:   341 VD-DVVRSRKPPNSFKPENMDV 361
              + D   S++   S   E ++V
Sbjct:   301 SEKDAEGSQEVVESVSAEKVEV 322

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0007009 "plasma membrane organization" evidence=IGI

GO:0009555 "pollen development" evidence=IGI

UNIPROTKB|E1C5S2 NEK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 200 (75.5 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 62/258 (24%), Positives = 113/258 (43%)

Query:    49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
             +G+G +GEV L  H    +D  +Y    + + H     R R   E+   L  + +    +
Sbjct:    12 VGKGSYGEVSLVRH---RQDSKQYVIKKLNLKHA--SSRERKAAEQEAQLLSQLKHPNIV 66

Query:   109 CWLQGISVINGKICIIMKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
              + +     +G + I+M F EG  +  R+ + KG  L  + V  + + +A  +  LH K 
Sbjct:    67 AYRESWQGEDGLLYIVMGFCEGGDLYHRLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 126

Query:   168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
             IL  +LK  N  L   +   +GD+            +S L   +GTP YM+PE +  +  
Sbjct:   127 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTL---IGTPYYMSPELFSNK-- 181

Query:   228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
              P ++++D W   C + EM T       + ++ +   ++  + +PP+P    P +  ++ 
Sbjct:   182 -PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPKDYSPQLVEIIQ 239

Query:   288 GCFEYDLRSRPLMTDILR 305
                      RP +  ILR
Sbjct:   240 TMLSKRPEQRPSVKSILR 257

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

TAIR|locus:2092890 MAPKKK7 "mitogen-activated protein kinase kinase kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 70/256 (27%), Positives = 120/256 (46%)

Query:    45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
             L   IG+G +G V+     L  E+ D      V + + V+ED +  +++ + DL LK   
Sbjct:    22 LGDEIGKGAYGRVYKG---LDLENGDFVAIKQVSLENIVQED-LNTIMQEI-DL-LKNLN 75

Query:   105 VEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
              + I    G S     + II+++ E GS+ + +   K G    S V  Y   + +G++ L
Sbjct:    76 HKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135

Query:   164 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
             H +G++  ++K  N +  +     L D             +  +   +GTP +MAPE   
Sbjct:   136 HEQGVIHRDIKGANILTTKEGLVKLADFGVATKLNEADVNTHSV---VGTPYWMAPEVI- 191

Query:   224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAV 282
              E+ G +   +D W   C++IE+LT V P    + +  ++  V  + + PPIP  L P +
Sbjct:   192 -EMSG-VCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIV--QDDNPPIPDSLSPDI 247

Query:   283 ENVLLGCFEYDLRSRP 298
              + L  CF+ D R RP
Sbjct:   248 TDFLRQCFKKDSRQRP 263

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007009 "plasma membrane organization" evidence=IGI

GO:0009555 "pollen development" evidence=IGI

UNIPROTKB|E1BWZ5 NEK4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 62/258 (24%), Positives = 113/258 (43%)

Query:    49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
             +G+G +GEV L  H    +D  +Y    + + H     R R   E+   L  + +    +
Sbjct:    12 VGKGSYGEVSLVRH---RQDSKQYVIKKLNLKHA--SSRERKAAEQEAQLLSQLKHPNIV 66

Query:   109 CWLQGISVINGKICIIMKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
              + +     +G + I+M F EG  +  R+ + KG  L  + V  + + +A  +  LH K 
Sbjct:    67 AYRESWQGEDGLLYIVMGFCEGGDLYHRLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 126

Query:   168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
             IL  +LK  N  L   +   +GD+            +S L   +GTP YM+PE +  +  
Sbjct:   127 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTL---IGTPYYMSPELFSNK-- 181

Query:   228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
              P ++++D W   C + EM T       + ++ +   ++  + +PP+P    P +  ++ 
Sbjct:   182 -PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPKDYSPQLVEIIQ 239

Query:   288 GCFEYDLRSRPLMTDILR 305
                      RP +  ILR
Sbjct:   240 TMLSKRPEQRPSVKSILR 257

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

POMBASE|SPAC9G1.02 wis4 "MAP kinase kinase kinase Wis4" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 200 (75.5 bits), Expect = 5.4e-12, P = 5.4e-12
 Identities = 81/317 (25%), Positives = 128/317 (40%)

Query:     4 KVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHY 63
             ++A G   D    VF + D ++ A + SN T  W      +  H +  G FG+V+   + 
Sbjct:  1006 RLAIGHVLDDS--VFRNRDFIKLASSFSNITIRW------QQGHFVRSGMFGDVYTGVN- 1056

Query:    64 LSTEDCDEYHEVAVKILHPVKE--DRMR---VLLERLNDLFLKCQGVEGICWLQGISVIN 118
             + T D     E+ ++     +   D++     +LERLN           +    G+ V  
Sbjct:  1057 METGDLLAVKEIKLQDSRTFRSTVDQIHNEMTVLERLNH--------PNVVTYYGVEVHR 1108

Query:   119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKGILVLNLKPF 176
              K+ I M+F +G S+ D +A    G++   NV + Y + L +G+  +HS+ IL  ++KP 
Sbjct:  1109 EKVYIFMEFCQGGSLADLLAH---GRIEDENVLKVYVVQLLEGLAYIHSQHILHRDIKPA 1165

Query:   177 NFILNEADRAVLGDVXXXXXXX-------XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGP 229
             N +L+        D                      +L    GTP YMAPE      +G 
Sbjct:  1166 NILLDHRGMIKYSDFGSALYVSPPTDPEVRYEDIQPELQHLAGTPMYMAPEIILGTKKGD 1225

Query:   230 ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--LPPAVENVLL 287
                  D W   C I+EM+TG  P      +      V     P IP    +     + + 
Sbjct:  1226 FG-AMDIWSLGCVILEMMTGSTPWSEMDNEWAIMYHVAAMHTPSIPQNEKISSLARDFIE 1284

Query:   288 GCFEYDLRSRPLMTDIL 304
              CFE D   RP   D+L
Sbjct:  1285 QCFERDPEQRPRAVDLL 1301

GO:0000165 "MAPK cascade" evidence=IC

GO:0004709 "MAP kinase kinase kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=ISM

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IGI

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0031098 "stress-activated protein kinase signaling cascade" evidence=IGI

GO:0051403 "stress-activated MAPK cascade" evidence=NAS

GO:0051519 "activation of bipolar cell growth" evidence=IMP

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032670001 SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence); (638 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	620
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-31
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-31
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-28
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-27
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-25
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-24
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-22
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-21
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-21
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-20
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-20
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-19
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-19
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-18
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-17
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	5e-15
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-15
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-13
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-13
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-13
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	8e-13
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-12
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-12
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-12
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-12
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-12
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-12
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-11
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-11
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-11
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-11
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-11
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-11
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-10
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-10
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-10
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-10
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-10
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-10
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-10
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-10
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-09
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-09
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-09
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-09
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	8e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	9e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	9e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-07
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-07
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-07
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	5e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	8e-07
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-07
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-06
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	6e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-06
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	9e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	9e-06
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	6e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-05
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	7e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	7e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	7e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	6e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	8e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.001
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.001
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.001
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.001
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.001
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.002
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.002
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.002
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.002
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.002
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.003
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.003
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.004
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.004
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.004
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  120 bits (303), Expect = 3e-31
 Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 48/261 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FG V+LA       D     +VA+KI+       +   L R  ++  K      I
Sbjct: 1   LGEGGFGTVYLA------RDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH-PNI 53

Query: 109 CWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L G+      + ++M++ E GS+ D + +   GKLS   + R  + + +G+  LHS G
Sbjct: 54  VKLYGVFEDENHLYLVMEYCEGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYLHSNG 112

Query: 168 ILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
           I+  +LKP N +L+  + +  L D G+  LL             +GTP YMAPE    + 
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT---IVGTPAYMAPEVLLGK- 168

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
            G  S ++D W     + E+                                 P +++++
Sbjct: 169 -GYYSEKSDIWSLGVILYEL---------------------------------PELKDLI 194

Query: 287 LGCFEYDLRSRPLMTDILRVF 307
               + D   RP   +IL   
Sbjct: 195 RKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  121 bits (306), Expect = 4e-31
 Identities = 70/269 (26%), Positives = 104/269 (38%), Gaps = 36/269 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVL------LERL 95
                +GRG FG V+LA     T +      +AVK   L    E+ +  L      L  L
Sbjct: 3   TRGELLGRGSFGSVYLAL-DKDTGE-----LMAVKSVELSGDSEEELEALEREIRILSSL 56

Query: 96  NDLFL-KCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
               + +  G E              + I +++   GS+   +   K GKL    + +Y 
Sbjct: 57  QHPNIVRYYGSE-------RDEEKNTLNIFLEYVSGGSLSSLLK--KFGKLPEPVIRKYT 107

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             + +G+  LHS GI+  ++K  N +++      L D G    L  I         R GT
Sbjct: 108 RQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVR-GT 166

Query: 214 PNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQ 269
           P +MA     PEV          D W   C++IEM TG  P    G  +  +Y  +    
Sbjct: 167 PYWMA-----PEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALY-KIGSSG 220

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           E P IP  L    ++ L  C   D + RP
Sbjct: 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRP 249

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  114 bits (288), Expect = 1e-28
 Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 23/267 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLK 101
           ++  ++G G FG+V+LA     T        VA+K++    +K+DR R+L E      LK
Sbjct: 2   EILEKLGEGSFGKVYLARD-KKTG-----KLVAIKVIKKKKIKKDRERILREIK---ILK 52

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGI 160
                 I  L  +     K+ ++M++ EG  GD    LK  G+LS      Y   +   +
Sbjct: 53  KLKHPNIVRLYDVFEDEDKLYLVMEYCEG--GDLFDLLKKRGRLSEDEARFYLRQILSAL 110

Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE 220
             LHSKGI+  +LKP N +L+E     L D G+   L      ++     +GTP YMAPE
Sbjct: 111 EYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT----FVGTPEYMAPE 166

Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPS-GL 278
                         D W     + E+LTG  P  G   + E++  + + +   P P   +
Sbjct: 167 VLL---GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDI 223

Query: 279 PPAVENVLLGCFEYDLRSRPLMTDILR 305
            P  ++++      D   R    + L+
Sbjct: 224 SPEAKDLIRKLLVKDPEKRLTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  113 bits (282), Expect = 4e-27
 Identities = 72/350 (20%), Positives = 122/350 (34%), Gaps = 30/350 (8%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVE 106
           +G G FGEV+LA              VA+K+L    E +        R   +        
Sbjct: 8   LGEGSFGEVYLARDR---------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLH 164
            I  L       G + ++M++ +G   + + +  G  G LS S        +   +  LH
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 165 SKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPR---RLGTPNYMAPE 220
           SKGI+  ++KP N +L+   R V L D G+  LL      SS        +GTP YMAPE
Sbjct: 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178

Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-----------RQ 269
                     S  +D W    ++ E+LTG+ P  G          ++             
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR--VFKSDGGWTGHGSRILPDKSSS 327
             P  P  +  A  ++L      D ++R   +  L   +           S +L    S+
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSA 298

Query: 328 GYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGES 377
                     +  +  +       +  K ++ +  +        ++   S
Sbjct: 299 PLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNS 348

Length = 384

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  106 bits (266), Expect = 1e-25
 Identities = 71/264 (26%), Positives = 106/264 (40%), Gaps = 21/264 (7%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVE 106
           ++G G FG V+ A H   T        VAVKIL    E         R   +  +     
Sbjct: 6   KLGSGSFGTVYKAKH-KGTGK-----IVAVKILKKRSEKSKKDQTARREIRILRRLSH-P 58

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHS 165
            I  L         + ++M++ EG  GD    L +GG LS     + A+ + +G+  LHS
Sbjct: 59  NIVRLIDAFEDKDHLYLVMEYCEG--GDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHS 116

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
            GI+  +LKP N +L+E     + D G+   LL     SS L   +GTP YMAPE     
Sbjct: 117 NGIIHRDLKPENILLDENGVVKIADFGLAKKLLK---SSSSLTTFVGTPWYMAPEVLL-- 171

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP---RCGRSVDEIYDAVVRRQEIPPIP--SGLPP 280
                  + D W     + E+LTG  P          ++   ++        P  S    
Sbjct: 172 GGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSE 231

Query: 281 AVENVLLGCFEYDLRSRPLMTDIL 304
             ++++  C   D   RP   +IL
Sbjct: 232 EAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  101 bits (255), Expect = 3e-24
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 52/278 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVA--VKILHPVKEDRMRVLLE------------- 93
           IG+G FG+V+L        D   Y  V   + + +  +++R   L E             
Sbjct: 8   IGKGSFGKVYLVRR---KSDGKLY--VLKEIDLSNMSEKEREDALNEVKILKKLNHPNII 62

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-----GGKLSLSN 148
           +  + F +                 GK+CI+M++ +G  GD   ++K     G       
Sbjct: 63  KYYESFEE----------------KGKLCIVMEYADG--GDLSQKIKKQKKEGKPFPEEQ 104

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
           +  + + L   +  LHS+ IL  ++KP N  L       LGD GI  +L      + DL 
Sbjct: 105 ILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS----TVDLA 160

Query: 209 R-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
           +  +GTP Y++PE  Q     P ++++D W   C + E+ T   P  G ++ E+   +++
Sbjct: 161 KTVVGTPYYLSPELCQ---NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            Q  PPIPS     + N++    + D   RP +  IL+
Sbjct: 218 GQ-YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 97.7 bits (244), Expect = 8e-23
 Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 27/212 (12%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           ++  +IG+G FGEV+ A H  + +      EVA+K++    +++   ++  +  +  KC+
Sbjct: 3   EILEKIGKGGFGEVYKARHKRTGK------EVAIKVIKLESKEKKEKIINEIQ-ILKKCK 55

Query: 104 -----GVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
                   G  +L+       ++ I+M+F   GS+ D + +     L+ S +     +L 
Sbjct: 56  HPNIVKYYG-SYLK-----KDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELL 108

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
           +G+  LHS GI+  ++K  N +L       L D G+   L      ++     +GTP +M
Sbjct: 109 KGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT----MVGTPYWM 164

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
           APE        P  ++ D W    + IE+  G
Sbjct: 165 APEVIN---GKPYDYKADIWSLGITAIELAEG 193

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 97.1 bits (242), Expect = 1e-22
 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 16/190 (8%)

Query: 120 KICIIMKFYEGSVGD-----RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLK 174
           K+CI+M++     GD        + K   +    ++R  I L +G+  LH + IL  +LK
Sbjct: 73  KLCIVMEYAPF--GDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLK 130

Query: 175 PFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET 234
             N +L   D   +GD+GI  +L      +     ++GTP+YMAPE W+     P S+++
Sbjct: 131 SANILLVANDLVKIGDLGISKVLKKNMAKT-----QIGTPHYMAPEVWK---GRPYSYKS 182

Query: 235 DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
           D W   C + EM T   P   RS+ ++   V R +  PPIP      ++N +    +   
Sbjct: 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-YPPIPPIYSQDLQNFIRSMLQVKP 241

Query: 295 RSRPLMTDIL 304
           + RP    IL
Sbjct: 242 KLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 93.7 bits (233), Expect = 2e-21
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
           GK+ I+M++ E G +   +   +G  L    V+R+ I +  G+  LHSK IL  ++K  N
Sbjct: 72  GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN 131

Query: 178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDS 236
             L+  D   +GD+G+  LL      +++     +GTP Y++PE  + +   P + ++D 
Sbjct: 132 LFLDAYDNVKIGDLGVAKLL----SDNTNFANTIVGTPYYLSPELCEDK---PYNEKSDV 184

Query: 237 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYD 293
           W     + E  TG  P    +      A++    R   PP+       +  ++  C   D
Sbjct: 185 WALGVVLYECCTGKHPFDANN----QGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKD 240

Query: 294 LRSRPLMTDILR 305
            R RP    +LR
Sbjct: 241 YRQRPDTFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 92.6 bits (231), Expect = 5e-21
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 21/272 (7%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF--L 100
           L L  ++G G FGEV+  T  L  +   +  EVAVK L     ++      R   +   L
Sbjct: 1   LTLGKKLGEGAFGEVYKGT--LKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL 58

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
               +  +  L G+      + I+M++   G + D + + +  +LSLS++  +A+ +A+G
Sbjct: 59  DHPNI--VK-LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARG 115

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP---NY 216
           +  L SK  +  +L   N ++ E     + D G     L   L   D  +  G      +
Sbjct: 116 MEYLESKNFIHRDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYKVKGGKLPIRW 170

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           MAPE  +    G  + ++D W F   + E+ T G +P  G S  E+ + + +     P P
Sbjct: 171 MAPESLK---EGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKG-YRLPKP 226

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
              PP +  ++L C+  D   RP  ++++ + 
Sbjct: 227 PNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 91.1 bits (227), Expect = 2e-20
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 22/272 (8%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF--L 100
           L L  ++G G FGEV+     L  +   +  EVAVK L     ++      R   +   L
Sbjct: 1   LTLGKKLGEGAFGEVYKGK--LKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL 58

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
               V  +  L G+      + I+M++ E G +   + +    KLSLS++  +A+ +A+G
Sbjct: 59  DHPNV--VK-LLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARG 114

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP---NY 216
           +  L SK  +  +L   N ++ E     + D G     L   L   D  R+ G      +
Sbjct: 115 MEYLESKNFIHRDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYRKRGGKLPIRW 169

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           MAPE  +    G  + ++D W F   + E+ T G QP  G S +E+ + +       P P
Sbjct: 170 MAPESLK---EGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNG-YRLPQP 225

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
              PP + +++L C+  D   RP  ++++ + 
Sbjct: 226 PNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 89.1 bits (221), Expect = 8e-20
 Identities = 71/274 (25%), Positives = 114/274 (41%), Gaps = 19/274 (6%)

Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL- 98
           P+  +    +G+G FG V+L        D D   E+AVK +    +       + +N L 
Sbjct: 1   PTNWRRGKLLGQGAFGRVYLCY------DVDTGRELAVKQVPFDPDSPE--TKKEVNALE 52

Query: 99  ----FLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYA 153
                LK    E I    G    +  + I M++  G SV D++     G L+ +   +Y 
Sbjct: 53  CEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYT 110

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             + +G+  LHS  I+  ++K  N + + A    LGD G    L  I    + +    GT
Sbjct: 111 RQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGT 170

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           P +M+PE    E  G    + D W   C+++EMLT   P            +  +   P 
Sbjct: 171 PYWMSPEVISGEGYGR---KADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ 227

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +PS + P   N L   F  + + RP   ++LR F
Sbjct: 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 88.3 bits (220), Expect = 1e-19
 Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 39/281 (13%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           L+L  ++G G FGEV+  T     E  +   +VAVK L   KE       E   + FL+ 
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTET--KVAVKTL---KEGAS----EEEREEFLE- 50

Query: 103 QGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFR 151
              E           I  L G+      + I+ ++   G + D + +  G KL+L ++ +
Sbjct: 51  ---EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQ 106

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG----IPLPSSDL 207
            A+ +A+G+  L SK  +  +L   N ++ E     + D G+   +             L
Sbjct: 107 MALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKL 166

Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
           P       +MAPE  +    G  + ++D W F   + E+ T G QP  G S +E+ + + 
Sbjct: 167 P-----IKWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELL- 217

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
                 P P   P  +  ++L C+ YD   RP  ++++   
Sbjct: 218 EDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 36/261 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRV------LLERLNDLFL 100
           IGRG FG V+   +     +  ++  VA+K   L  +KE+ ++       LL+ L     
Sbjct: 8   IGRGAFGVVYKGLN----LETGDF--VAIKQISLEKIKEEALKSIMQEIDLLKNLKH--- 58

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
                  I    G    +  + II+++ E GS+   +   K G    S V  Y   + QG
Sbjct: 59  -----PNIVKYIGSIETSDSLYIILEYAENGSLRQIIK--KFGPFPESLVAVYVYQVLQG 111

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYM 217
           +  LH +G++  ++K  N +  +     L D G     +   L          +GTP +M
Sbjct: 112 LAYLHEQGVIHRDIKAANILTTKDGVVKLADFG-----VATKLNDVSKDDASVVGTPYWM 166

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +       S  +D W   C++IE+LTG  P    +       +V+    PP+P G
Sbjct: 167 APEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH-PPLPEG 222

Query: 278 LPPAVENVLLGCFEYDLRSRP 298
           + P +++ L+ CF+ D   RP
Sbjct: 223 ISPELKDFLMQCFQKDPNLRP 243

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 83.8 bits (208), Expect = 8e-18
 Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 39/259 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMR-VLLERLNDLFLKCQG 104
           IG G F  V LA       + +   E A+KIL     +KE +++ V +E+  ++  +  G
Sbjct: 9   IGEGSFSTVVLAK------EKETNKEYAIKILDKRQLIKEKKVKYVKIEK--EVLTRLNG 60

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQ 162
             GI  L         +  ++++     G+ + Q   K G L       YA ++   +  
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPN--GE-LLQYIRKYGSLDEKCTRFYAAEILLALEY 117

Query: 163 LHSKGILVLNLKPFNFILNEADRA---------VLGDVGIPHLLLGIPLPSSDLPRRL-- 211
           LHSKGI+  +LKP N +L++             VL     P    G          +   
Sbjct: 118 LHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177

Query: 212 ------GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
                 GT  Y++PE        P    +D W   C I +MLTG  P  G +    +  +
Sbjct: 178 RFASFVGTAEYVSPELLN---EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234

Query: 266 VRRQEIPPIPSGLPPAVEN 284
           ++ +     P   PP  ++
Sbjct: 235 LKLE--YSFPPNFPPDAKD 251

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 80.6 bits (200), Expect = 5e-17
 Identities = 65/267 (24%), Positives = 104/267 (38%), Gaps = 50/267 (18%)

Query: 49  IGRGPFGEVWLATH----------YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V L              L  +   +  EV     H + E   R +L R+N  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVE----HTLTE---RNILSRINHP 53

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           F+    V+     Q       K+ +++++  G  G+  + L K G+ S      YA ++ 
Sbjct: 54  FI----VKLHYAFQT----EEKLYLVLEYAPG--GELFSHLSKEGRFSEERARFYAAEIV 103

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL------ 211
             +  LHS GI+  +LKP N +L+      L D G+          + +L          
Sbjct: 104 LALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGL----------AKELSSEGSRTNTF 153

Query: 212 -GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
            GTP Y+APE              D W     + EMLTG  P       EIY+ +++   
Sbjct: 154 CGTPEYLAPEVLL---GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP- 209

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSR 297
               P  L P   +++ G  + D   R
Sbjct: 210 -LRFPEFLSPEARDLISGLLQKDPTKR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 75.0 bits (184), Expect = 5e-15
 Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 17/260 (6%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G+G +GEV L  H     D  +Y  V  K+       R R   E+   L  + +    +
Sbjct: 8   VGKGSYGEVSLVRH---RTDGKQY--VIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV 62

Query: 109 CWLQGISVINGKICIIMKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
            + +     +G + I+M F EG  GD   ++ + KG  L  + V  + + +A  +  LH 
Sbjct: 63  AYRESWEGEDGLLYIVMGFCEG--GDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE 120

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
           K IL  +LK  N  L   +   +GD+GI  +L      +S L   +GTP YM+PE +  +
Sbjct: 121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTL---IGTPYYMSPELFSNK 177

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
              P ++++D W   C + EM T       + ++ +   ++   ++PP+P    P +  +
Sbjct: 178 ---PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRII-EGKLPPMPKDYSPELGEL 233

Query: 286 LLGCFEYDLRSRPLMTDILR 305
           +          RP +  ILR
Sbjct: 234 IATMLSKRPEKRPSVKSILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 74.9 bits (185), Expect = 6e-15
 Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 46/283 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER----LNDLFLKCQG 104
           +G G FGEV+     L  +D  +  EVAVK L     +  R    +    +  L     G
Sbjct: 3   LGEGAFGEVYKGK--LKGKD-GKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-----G 54

Query: 105 VEGICWLQGISVINGKICIIMKFYEG--------SVGDRMAQLKGGKLSLSNVFRYAIDL 156
              +  L G+      + +++++ EG                 +   LSL ++  +AI +
Sbjct: 55  HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI 114

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD---------L 207
           A+G+  L SK  +  +L   N ++ E     + D G     L   +   D         L
Sbjct: 115 AKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFG-----LSRDVYDDDYYRKKTGGKL 169

Query: 208 PRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
           P R     +MAPE     ++  I + ++D W F   + E+ T G  P  G S +E+ + +
Sbjct: 170 PIR-----WMAPES----LKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL 220

Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
            R+    P P   P  +  ++L C++ D   RP  ++++   +
Sbjct: 221 -RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 63/251 (25%), Positives = 95/251 (37%), Gaps = 38/251 (15%)

Query: 44  KLRHRIGRGPFGEVW----------LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +L   IG+G FG+V            A  Y++ + C E   V   +L        R +L+
Sbjct: 3   ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVR-NVL------NERRILQ 55

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD-RMAQLKGGKLSLSNVFRY 152
            LN  FL          L         + +++    G  GD R    +  K S   V  +
Sbjct: 56  ELNHPFL--------VNLWYSFQDEENMYLVVDLLLG--GDLRYHLSQKVKFSEEQVKFW 105

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
             ++   +  LHSKGI+  ++KP N +L+E     + D  I   +     P +      G
Sbjct: 106 ICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKV----TPDTLTTSTSG 161

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-- 270
           TP YMAPE    +     S   D W    +  E L G +P  G S   I D +  +QE  
Sbjct: 162 TPGYMAPEVLCRQGY---SVAVDWWSLGVTAYECLRGKRPYRGHS-RTIRDQIRAKQETA 217

Query: 271 IPPIPSGLPPA 281
               P+     
Sbjct: 218 DVLYPATWSTE 228

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (175), Expect = 7e-14
 Identities = 78/275 (28%), Positives = 117/275 (42%), Gaps = 24/275 (8%)

Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL- 98
           P   +L   +GRG FGEV+L        D D   E+AVK + P   D      E +N L 
Sbjct: 1   PVNWRLGKLLGRGAFGEVYLCY------DADTGRELAVKQV-PFDPDSQETSKE-VNALE 52

Query: 99  ----FLKCQGVEGICWLQGI--SVINGKICIIMKFYEG-SVGDRMAQLKG-GKLSLSNVF 150
                LK    + I    G        K+ I +++  G S+ D   QLK  G L+ +   
Sbjct: 53  CEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKD---QLKAYGALTENVTR 109

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
           RY   + QG+  LHS  I+  ++K  N + + A    LGD G    +  I +  + +   
Sbjct: 110 RYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSV 169

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
            GTP +M+PE    E  G    + D W  AC+++EMLT   P            +  +  
Sbjct: 170 TGTPYWMSPEVISGEGYGR---KADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT 226

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            P +P G+  A  + L   F  + + RP    +LR
Sbjct: 227 KPMLPDGVSDACRDFLKQIF-VEEKRRPTAEFLLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 37/242 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-------RVLLERLNDLFLK 101
           I +G +G V+LA    ST D       A+K+   +K+  M       +VL ER  D+  +
Sbjct: 1   ISKGAYGRVFLAKK-KSTGDI-----YAIKV---IKKADMIRKNQVDQVLTER--DILSQ 49

Query: 102 CQG---VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLA 157
            Q    V+     QG       + ++M++  G  GD  + L+  G L       Y  ++ 
Sbjct: 50  AQSPYVVKLYYSFQGKK----NLYLVMEYLPG--GDLASLLENVGSLDEDVARIYIAEIV 103

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VGIPHLLLGIPLPSSDLPRRLG 212
             +  LHS GI+  +LKP N +++      L D     VG+    + +     +  R +G
Sbjct: 104 LALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVG 163

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           TP+Y+APE     +    S   D W   C + E L G+ P  G + +EI+  ++   +I 
Sbjct: 164 TPDYIAPEVI---LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG-KIE 219

Query: 273 PI 274
             
Sbjct: 220 WP 221

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 77/287 (26%), Positives = 112/287 (39%), Gaps = 58/287 (20%)

Query: 45  LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKI---------LHPVKEDRMRVLLERL 95
             ++IG G FG+V+ A       + D    +AVK                D M+VL E L
Sbjct: 4   RGNKIGGGTFGKVYTAV------NLDTGELMAVKEIRIQDNDPKTIKEIADEMKVL-ELL 56

Query: 96  NDLFL-KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
               L K  GVE         V   K+ I M++  G   + + +  G  L    +  Y +
Sbjct: 57  KHPNLVKYYGVE---------VHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTL 106

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---- 210
            L +G+  LHS GI+  ++KP N  L+      LGD G    L      ++         
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKL----KNNTTTMGEEVQS 162

Query: 211 -LGTPNYMAPEQWQPEVRGPISFET--------DSWGFACSIIEMLTGVQP--RCGRSVD 259
             GTP YMAPE         I+           D W   C ++EM TG +P         
Sbjct: 163 LAGTPAYMAPEV--------ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214

Query: 260 EIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            ++   V     PPIP    L P  ++ L  C E D + RP  +++L
Sbjct: 215 IMFH--VGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 70.3 bits (173), Expect = 2e-13
 Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 39/287 (13%)

Query: 41  SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           S L+    +G+G  G V+   H  + +        A+K +H   ++  R  L R      
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGK------IYALKKIHVDGDEEFRKQLLRELKTLR 54

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
            C+    +    G     G+I I++++ + GS+ D +   K GK+    +   A  + +G
Sbjct: 55  SCE-SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLK--KVGKIPEPVLAYIARQILKG 111

Query: 160 ILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL------- 211
           +  LH+K  I+  ++KP N ++N      + D GI          S  L   L       
Sbjct: 112 LDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGI----------SKVLENTLDQCNTFV 161

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV---QPRCGRSVDEIYDAVVRR 268
           GT  YM+PE+ Q E     S+  D W    +++E   G     P    S  E+  A+   
Sbjct: 162 GTVTYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-D 217

Query: 269 QEIPPIPSGL-PPAVENVLLGCFEYDLRSRPLMTDILR---VFKSDG 311
              P +P+    P   + +  C + D + RP   ++L+   + K+D 
Sbjct: 218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKADN 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 31/214 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL----LERLNDLFL---- 100
           +G+G FGEV  A    +T       ++  K L     ++M +L    LE++N  F+    
Sbjct: 1   LGKGGFGEV-CAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLA 59

Query: 101 -KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
              +    +C +  +S++NG     +K++  +VG+R        L +  V  Y+  +  G
Sbjct: 60  YAFESKTHLCLV--MSLMNGGD---LKYHIYNVGER-------GLEMERVIHYSAQITCG 107

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD-LPRRLGTPNYMA 218
           IL LHS  I+  ++KP N +L++     L D+G     L + L     + +R GT  YMA
Sbjct: 108 ILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLG-----LAVELKDGKTITQRAGTNGYMA 162

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           PE  + E   P S+  D +   CSI EM+ G  P
Sbjct: 163 PEILKEE---PYSYPVDWFAMGCSIYEMVAGRTP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 69.8 bits (171), Expect = 3e-13
 Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 39/232 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLFLKCQG 104
           I +G FG V+LA    +     +Y   A+K+L       K     V  ER     +  QG
Sbjct: 4   ISKGAFGSVYLAKKRST----GDY--FAIKVLKKSDMIAKNQVTNVKAERAI---MMIQG 54

Query: 105 ----VEGICWLQGISVINGK-ICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQ 158
               V  + +    S  +   + ++M++  G  GD  + +K  G L      +Y  ++  
Sbjct: 55  ESPYVAKLYY----SFQSKDYLYLVMEYLNG--GDCASLIKTLGGLPEDWAKQYIAEVVL 108

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYM 217
           G+  LH +GI+  ++KP N ++++     L D G+    L          ++  GTP+Y+
Sbjct: 109 GVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL--------ENKKFVGTPDYL 160

Query: 218 APEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
           APE     + G      +D W   C I E L G  P    + D ++D ++ R
Sbjct: 161 APET----ILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 68.4 bits (167), Expect = 8e-13
 Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 29/266 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR----VLLERLNDLFLKCQG 104
           IG G FG+++LA     +E C    E+ +  + PVKE        +LL ++    +    
Sbjct: 8   IGEGSFGKIYLAKAKSDSEHC-VIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNI---- 61

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGIL 161
           V      Q     NG++ I+M++ +G  GD M ++   +G   S   +  + + ++ G+ 
Sbjct: 62  VTFFASFQE----NGRLFIVMEYCDG--GDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 162 QLHSKGILVLNLKPFNFILNEADR-AVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAP 219
            +H + IL  ++K  N  L++    A LGD GI   L      S +L    +GTP Y++P
Sbjct: 116 HIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND----SMELAYTCVGTPYYLSP 171

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
           E  Q     P + +TD W   C + E+ T   P  G ++ ++   + +     PI     
Sbjct: 172 EICQNR---PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-FAPISPNFS 227

Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR 305
             + +++   F+   R RP +T IL+
Sbjct: 228 RDLRSLISQLFKVSPRDRPSITSILK 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 73/254 (28%), Positives = 112/254 (44%), Gaps = 23/254 (9%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IG+G FG+V LA       D   Y   AVK+L       K+++  ++ ER  ++ LK   
Sbjct: 3   IGKGSFGKVLLAKR---KSDGSFY---AVKVLQKKTILKKKEQNHIMAER--NVLLKNLK 54

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQL 163
              +  L        K+  ++ +  G  G+    L+  +  L    R YA ++A  I  L
Sbjct: 55  HPFLVGLHYSFQTAEKLYFVLDYVNG--GELFFHLQRERCFLEPRARFYAAEVASAIGYL 112

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS  I+  +LKP N +L+     VL D G+     G+  P        GTP Y+APE  +
Sbjct: 113 HSLNIIYRDLKPENILLDSQGHVVLTDFGLCK--EGVE-PEETTSTFCGTPEYLAPEVLR 169

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
            E   P     D W     + EML G+ P   R V ++YD ++ +     +P G   A  
Sbjct: 170 KE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL--QLPGGKTVAAC 224

Query: 284 NVLLGCFEYDLRSR 297
           ++L+G    D R R
Sbjct: 225 DLLVGLLHKDQRRR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 26/270 (9%)

Query: 45  LRHRIGRGPFGEVWLA--THYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLF 99
           L+ R+G+G FG V+L      ++ E      E+ V  L+P   V+ ++   LL +L+   
Sbjct: 4   LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH-- 61

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDL 156
                   I       +     CII ++ EG  +  ++ +LK  G  LS + V  + I L
Sbjct: 62  ------PAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQL 115

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPN 215
             G+  +H + IL  +LK  N  L   +   +GD G+  LL+G    S DL     GTP 
Sbjct: 116 LLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG----SCDLATTFTGTPY 170

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YM+PE  + +  G  S ++D W   C + EM        G++   +   +V     P +P
Sbjct: 171 YMSPEALKHQ--GYDS-KSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLP 226

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                 + +++      D   RP   +ILR
Sbjct: 227 ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 42/274 (15%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-- 105
           ++G G FG V        +    +   VAVK L   K      L + ++D   +   +  
Sbjct: 2   KLGDGSFGVVRRGE---WSTSGGKVIPVAVKCLKSDK------LSDIMDDFLKEAAIMHS 52

Query: 106 ---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
              E +  L G+ V+   + ++ +    GS+ DR+ +   G   +S +  YA+ +A G+ 
Sbjct: 53  LDHENLIRLYGV-VLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMR 111

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG--------T 213
            L SK  +  +L   N +L   D+  +GD G              L R L          
Sbjct: 112 YLESKRFIHRDLAARNILLASDDKVKIGDFG--------------LMRALPQNEDHYVME 157

Query: 214 PNYMAPEQW-QPEVRGPISFE--TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
            +   P  W  PE     +F   +D W F  ++ EM T G +P  G S  +I   + +  
Sbjct: 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG 217

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           E    P   P  + NV+L C+ ++   RP    +
Sbjct: 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAAL 251

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 67.0 bits (163), Expect = 2e-12
 Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 26/268 (9%)

Query: 37  WIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W  P   LKL  ++G G FGEVW+AT+       +++ +VAVK + P     +   L   
Sbjct: 1   WEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAFLAEA 52

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI 154
           N   +K    + +  L  + V    I II +F   GS+ D +   +G K  L  +  ++ 
Sbjct: 53  N--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 109

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
            +A+G+  +  +  +  +L+  N +++ +    + D G+  +     +  ++   R G  
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV-----IEDNEYTAREGAK 164

Query: 215 NYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               P +W  PE    G  + ++D W F   ++E++T G  P  G S  E+  A+ R   
Sbjct: 165 ---FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR 221

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +P   +  P  + N+++ C++     RP
Sbjct: 222 MPRPEN-CPEELYNIMMRCWKNRPEERP 248

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 66.7 bits (163), Expect = 6e-12
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 37/261 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
           +G+G FG+V LA      +  +E+   A+K L   K+D   V+LE   D  ++C  VE  
Sbjct: 3   LGKGSFGKVMLA----ELKGTNEFF--AIKAL---KKD---VVLE---DDDVECTMVERR 47

Query: 108 ----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDL 156
                     +  L         +  +M++  G  GD M  ++  G+   +    YA ++
Sbjct: 48  VLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG--GDLMFHIQSSGRFDEARARFYAAEI 105

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
             G+  LH KGI+  +LK  N +L++     + D G+    +     +S      GTP+Y
Sbjct: 106 ICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF---CGTPDY 162

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE  + +     +   D W F   + EML G  P  G   DE++D++    + P  P 
Sbjct: 163 IAPEILKGQK---YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSI--LNDRPHFPR 217

Query: 277 GLPPAVENVLLGCFEYDLRSR 297
            +    ++ L   FE D   R
Sbjct: 218 WISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 65.6 bits (160), Expect = 8e-12
 Identities = 65/273 (23%), Positives = 117/273 (42%), Gaps = 29/273 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRMRVLLERLNDLFLKC 102
           IG+G +G V+LA +  + E       +AVK +          + R + +++ L       
Sbjct: 9   IGKGTYGRVYLALNVTTGE------MMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL 62

Query: 103 QGVE--GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
           + ++   I    G       + I +++  G S+G  +     G+     V  +   + +G
Sbjct: 63  KDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEG 120

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  LHSKGIL  +LK  N +++      + D GI      I     ++  + G+  +MAP
Sbjct: 121 LAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ-GSVFWMAP 179

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPIP- 275
           E      +G  S + D W   C ++EM  G +P    S +E   A+ +   ++  PPIP 
Sbjct: 180 EVIHSYSQG-YSAKVDIWSLGCVVLEMFAGRRP---WSDEEAIAAMFKLGNKRSAPPIPP 235

Query: 276 ---SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                L P   + L  CF  +  +RP   ++L+
Sbjct: 236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 66.0 bits (161), Expect = 8e-12
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 14/137 (10%)

Query: 120 KICIIMKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF 176
            +C++M    G  GD    +  +       +    YA  +  G+  LH + I+  +LKP 
Sbjct: 67  DLCLVMTLMNG--GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPE 124

Query: 177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETD 235
           N +L++      G+V I  L L + L      + R GTP YMAPE  Q EV     F  D
Sbjct: 125 NVLLDD-----HGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV---YDFSVD 176

Query: 236 SWGFACSIIEMLTGVQP 252
            +   C++ EM+ G  P
Sbjct: 177 WFALGCTLYEMIAGRSP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 65.6 bits (160), Expect = 9e-12
 Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 22/264 (8%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEG 107
           +G+G +G V+ A       D      +A+K + P ++ R ++ L E +            
Sbjct: 16  LGKGTYGIVYAA------RDLSTQVRIAIKEI-PERDSRYVQPLHEEI--ALHSYLKHRN 66

Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL--SNVFRYAIDLAQGILQLHS 165
           I    G    NG   I M+   G     + + K G L      +  Y   + +G+  LH 
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Query: 166 KGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGI-PLPSSDLPRRLGTPNYMAPEQWQ 223
             I+  ++K  N ++N     V + D G    L GI P   +      GT  YMAPE   
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET----FTGTLQYMAPEVID 182

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
              RG      D W   C+I+EM TG  P    G     ++   + +   P IP  L   
Sbjct: 183 KGPRG-YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH-PEIPESLSAE 240

Query: 282 VENVLLGCFEYDLRSRPLMTDILR 305
            +N +L CFE D   R    D+L+
Sbjct: 241 AKNFILRCFEPDPDKRASAHDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 24/266 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I   ++KL  ++G G FGEVW+  +  ST       +VAVK L P     ++  LE  N 
Sbjct: 3   IPRESIKLVKKLGAGQFGEVWMGYYNNST-------KVAVKTLKPGTMS-VQAFLEEAN- 53

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             +K    + +  L  +      I II ++  +GS+ D +   +GGK+ L  +  ++  +
Sbjct: 54  -LMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI 112

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           A+G+  +  K  +  +L+  N +++E+    + D G+  +     +  ++   R G    
Sbjct: 113 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV-----IEDNEYTAREGAK-- 165

Query: 217 MAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 272
             P +W  PE    G  + ++D W F   + E++T G  P  G S  ++  A+ R   +P
Sbjct: 166 -FPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP 224

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRP 298
                 P  + +++  C++     RP
Sbjct: 225 R-MENCPDELYDIMKTCWKEKAEERP 249

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 15/121 (12%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 210
           YA ++  G+  LH +  +  +LKP N +L++     + D+G     L + +P  +  R R
Sbjct: 107 YAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLG-----LAVKIPEGESIRGR 161

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
           +GT  YMAPE    +         D WG  C I EM+ G  P  GR         V+R+E
Sbjct: 162 VGTVGYMAPEVLNNQRYT---LSPDYWGLGCLIYEMIEGQSPFRGRK------EKVKREE 212

Query: 271 I 271
           +
Sbjct: 213 V 213

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 13/176 (7%)

Query: 124 IMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 182
           +M+F  G  GD M  ++  G+  L     YA ++  G+  LHSKGI+  +LK  N +L+ 
Sbjct: 74  VMEFLNG--GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR 131

Query: 183 ADRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 241
                + D G+    + G    S+      GTP+Y+APE  Q       +F  D W F  
Sbjct: 132 DGHIKIADFGMCKENVFGDNRAST----FCGTPDYIAPEILQGL---KYTFSVDWWSFGV 184

Query: 242 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
            + EML G  P  G   DE+++++  R + P  P  +    +++L   FE D   R
Sbjct: 185 LLYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDILEKLFERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 22/263 (8%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL-LERLNDLFLKCQGVEG 107
           +G G FG V+     L+ +D D +    V +    +  +  V  LE+   L  K Q    
Sbjct: 8   LGSGSFGSVYEG---LNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH-PN 63

Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I    G       + I ++    GS+   +   K G      +  Y   +  G+  LH +
Sbjct: 64  IVQYLGTEREEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDR 121

Query: 167 GILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
             +  ++K  N IL + +  V L D G+   ++      S      G+P +MAPE    +
Sbjct: 122 NTVHRDIKGAN-ILVDTNGVVKLADFGMAKQVVEFSFAKS----FKGSPYWMAPEVIAQQ 176

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV---VRRQEIPPIPSGLPPAV 282
             G      D W   C+++EM TG  P    S  E   AV    R +E+PPIP  L    
Sbjct: 177 --GGYGLAADIWSLGCTVLEMATGKPPW---SQLEGVAAVFKIGRSKELPPIPDHLSDEA 231

Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
           ++ +L C + D   RP   ++L 
Sbjct: 232 KDFILKCLQRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 31/263 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IG+G FG+V LA H       +E    AVK+L       K++   ++ ER  ++ LK   
Sbjct: 3   IGKGSFGKVLLARH-----KAEEKF-YAVKVLQKKAILKKKEEKHIMSER--NVLLKNVK 54

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQL 163
              +  L        K+  ++ +  G  G+    L+  +  L    R YA ++A  +  L
Sbjct: 55  HPFLVGLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPRARFYAAEIASALGYL 112

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS  I+  +LKP N +L+     VL D G+    +     +       GTP Y+APE   
Sbjct: 113 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---HNGTTSTFCGTPEYLAPEVLH 169

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
            +   P     D W     + EML G+ P   R+  E+YD ++ +      P  L P + 
Sbjct: 170 KQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNIT 220

Query: 284 N----VLLGCFEYDLRSRPLMTD 302
           N    +L G  + D   R    D
Sbjct: 221 NSARHLLEGLLQKDRTKRLGAKD 243

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 9/187 (4%)

Query: 121 ICIIMKFYEG-SVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           + I M++  G SV D   QLK  G L+ S   +Y   + +G+  LHS  I+  ++K  N 
Sbjct: 81  LTIFMEYMPGGSVKD---QLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANI 137

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           + + A    LGD G    L  I +  + +    GTP +M+PE    E  G    + D W 
Sbjct: 138 LRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGR---KADVWS 194

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             C+++EMLT   P            +  +   P +PS +     +  LGC   + R RP
Sbjct: 195 LGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD-FLGCIFVEARHRP 253

Query: 299 LMTDILR 305
              ++LR
Sbjct: 254 SAEELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 63.3 bits (154), Expect = 6e-11
 Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 30/268 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FGEV+  T             VAVK L     D+ +    +   L         I
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH-PNI 61

Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK--------LSLSNVFRYAIDLAQGI 160
             L G+ ++N    IIM+  EG  GD ++ L+  +        L+L  +    +D+A+G 
Sbjct: 62  VKLLGVCLLNEPQYIIMELMEG--GDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119

Query: 161 LQLHSKGILVLNLKPFNFILNE----ADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTP- 214
           + L     +  +L   N +++E    ADR V +GD G     L   +  SD  R+ G   
Sbjct: 120 VYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG-----LARDIYKSDYYRKEGEGL 174

Query: 215 ---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               +MAPE     + G  + ++D W F   + E+LT G QP    +  E+   V     
Sbjct: 175 LPVRWMAPESL---LDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR 231

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +   P   P  +  ++  C+  D   RP
Sbjct: 232 LQK-PENCPDKIYQLMTNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 63.5 bits (154), Expect = 9e-11
 Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 43/234 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
           +G+G FG+V LA      +  DE +  A+KIL   K+D +      + D  ++C  VE  
Sbjct: 8   LGKGSFGKVMLAER----KGTDELY--AIKIL---KKDVV------IQDDDVECTMVEKR 52

Query: 108 ----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDL 156
                     +  L        ++  +M++  G  GD M Q++  G+    +   YA ++
Sbjct: 53  VLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYQIQQVGRFKEPHAVFYAAEI 110

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTP 214
           A G+  LHSKGI+  +LK  N +L+      + D G+   ++  G+   +       GTP
Sbjct: 111 AIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTF-----CGTP 165

Query: 215 NYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           +Y+APE   +QP  +       D W F   + EML G  P  G   DE++ +++
Sbjct: 166 DYIAPEIIAYQPYGK-----SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 62.2 bits (151), Expect = 1e-10
 Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 24/264 (9%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
           +IG G FG+  L       ED  +Y   E+ +  + P + +  R  +  L+++       
Sbjct: 7   KIGEGSFGKAILVKS---KEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-----KH 58

Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
             I   Q     NG + I+M + EG  GD   ++   +G       +  + + +   +  
Sbjct: 59  PNIVQYQESFEENGNLYIVMDYCEG--GDLYKKINAQRGVLFPEDQILDWFVQICLALKH 116

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAPEQ 221
           +H + IL  ++K  N  L +     LGD GI  +L      + +L R  +GTP Y++PE 
Sbjct: 117 VHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS----TVELARTCIGTPYYLSPEI 172

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
            +     P + ++D W   C + EM T        ++  +   ++R    PP+ S     
Sbjct: 173 CENR---PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR-GSYPPVSSHYSYD 228

Query: 282 VENVLLGCFEYDLRSRPLMTDILR 305
           + N++   F+ + R RP +  IL 
Sbjct: 229 LRNLVSQLFKRNPRDRPSVNSILE 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 53/278 (19%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-------RMRVLLERLNDLFLK 101
           IGRG +G V+   H  +         VA+KI++    D       R   LL +L     +
Sbjct: 9   IGRGAYGAVYRGKHVPTG------RVVALKIINLDTPDDDVSDIQREVALLSQL-----R 57

Query: 102 CQGVEGI-----CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLS---LSNVFRYA 153
                 I      +L+G  +      IIM++ EG  G     +K G ++   +S + R  
Sbjct: 58  QSQPPNITKYYGSYLKGPRL-----WIIMEYAEG--GSVRTLMKAGPIAEKYISVIIR-- 108

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
            ++   +  +H  G++  ++K  N ++       L D G+  LL       S     +GT
Sbjct: 109 -EVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF---VGT 164

Query: 214 PNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCG----RSVDEIYDAVVR 267
           P +MAPE     +     ++T  D W    +I EM TG  P       R++  I  +   
Sbjct: 165 PYWMAPEV----ITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP 220

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           R E     +G    +   +  C + + + R    ++L+
Sbjct: 221 RLE----DNGYSKLLREFVAACLDEEPKERLSAEELLK 254

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 62.8 bits (153), Expect = 1e-10
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 47/249 (18%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMR-VLLER--------- 94
           ++G+G +G+V+LA      +D  E   VA+K +      K + +R VL ER         
Sbjct: 8   QVGQGGYGQVFLA----KKKDTGEI--VALKRMKKSLLFKLNEVRHVLTERDILTTTKSE 61

Query: 95  -LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRY 152
            L  L    Q  E              + + M++  G  GD    L   G LS  +   Y
Sbjct: 62  WLVKLLYAFQDDE-------------YLYLAMEYVPG--GDFRTLLNNLGVLSEDHARFY 106

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
             ++ + +  LH  G +  +LKP NF+++ +    L D G+      +   +S     +G
Sbjct: 107 MAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKG--IVTYANS----VVG 160

Query: 213 TPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           +P+YMAPE     +RG    F  D W   C + E L G  P  G + +E ++ +   +E 
Sbjct: 161 SPDYMAPEV----LRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET 216

Query: 272 PPIPSGLPP 280
              P    P
Sbjct: 217 LQRPVYDDP 225

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQG- 104
           +G+G FG+V LA      E    Y   AVK+L     +++D +   +     L L     
Sbjct: 3   LGKGSFGKVMLAR---LKESGRLY---AVKVLKKDVILQDDDVECTMTEKRILSLARNHP 56

Query: 105 --VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGIL 161
              +  C  Q       ++  +M+F  G  GD M  + K  +   +    YA ++   ++
Sbjct: 57  FLTQLYCCFQTPD----RLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEITSALM 110

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            LH KGI+  +LK  N +L+      L D G+    +     +S      GTP+Y+APE 
Sbjct: 111 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF---CGTPDYIAPEI 167

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
            Q  + GP     D W     + EML G  P    + D++++A++  + + P
Sbjct: 168 LQEMLYGP---SVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 216

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 9/118 (7%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 210
           YA ++  G+  LH + I+  +LKP N +L++      G + I  L L + +P  +  R R
Sbjct: 107 YAAEITCGLEDLHRERIVYRDLKPENILLDD-----YGHIRISDLGLAVEIPEGETIRGR 161

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
           +GT  YMAPE  + E     +F  D WG  C I EM+ G  P   R      + V RR
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 62.4 bits (152), Expect = 2e-10
 Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 49/280 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRM-------RVLLERLNDL 98
           +G+G FG+V LA     T++       AVK+L     +++D +       RVL       
Sbjct: 3   LGKGSFGKVLLA-ELKGTDEL-----YAVKVLKKDVILQDDDVECTMTEKRVLALAGKHP 56

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL     +     Q       ++  +M++  G  GD M  + + G+        YA ++ 
Sbjct: 57  FL----TQLHSCFQTKD----RLFFVMEYVNG--GDLMFHIQRSGRFDEPRARFYAAEIV 106

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
            G+  LH +GI+  +LK  N +L+      + D G+     GI L         GTP+Y+
Sbjct: 107 LGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCK--EGI-LGGVTTSTFCGTPDYI 163

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE    +   P     D W     + EML G  P  G   DE++ +++  +     P  
Sbjct: 164 APEILSYQ---PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--VRYPRW 218

Query: 278 LPPAVENVL-----------LGCFEY---DLRSRPLMTDI 303
           L    +++L           LGC      D++  P   +I
Sbjct: 219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 28/270 (10%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGV 105
           +IG+G FG+V+      +TE       VAVK        + + + L E      LK    
Sbjct: 2   KIGKGNFGDVYKGVLKGNTE-------VAVKTCRSTLPPDLKRKFLQE---AEILKQYDH 51

Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQL 163
             I  L G+ V    I I+M+   G  G  +  L  K  +L++  + + ++D A G+  L
Sbjct: 52  PNIVKLIGVCVQKQPIYIVMELVPG--GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYL 109

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
            SK  +  +L   N ++ E +   + D G+     G     SD  +++       P +W 
Sbjct: 110 ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI-------PIKWT 162

Query: 224 -PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
            PE    G  + E+D W +   + E  + G  P  G S  +  + +     +P  P   P
Sbjct: 163 APEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPA-PQLCP 221

Query: 280 PAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             +  ++L C+ YD  +RP  ++I    + 
Sbjct: 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 61.4 bits (149), Expect = 3e-10
 Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 38/262 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLER-----LNDLFL 100
           +G+G FG+V+L          D     A+K+L        DR+R  +ER     +N  F 
Sbjct: 4   LGQGSFGKVFLVRKITGP---DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPF- 59

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQG 159
                  I  L       GK+ +I+ F  G  GD   +L K    +  +V  Y  +LA  
Sbjct: 60  -------IVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALA 110

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR----LGTPN 215
           +  LHS GI+  +LKP N +L+E     L D G+          S D  ++     GT  
Sbjct: 111 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAYSFCGTVE 163

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YMAPE      R   +   D W F   + EMLTG  P  G+   E    +++ +    +P
Sbjct: 164 YMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--GMP 218

Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
             L P  +++L   F+ +  +R
Sbjct: 219 QFLSPEAQSLLRALFKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 34/280 (12%)

Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLND 97
           P+  +L   +G+G FG V+L        D D   E+AVK +   P   +  +     +N 
Sbjct: 1   PTNWRLGKLLGQGAFGRVYLCY------DADTGRELAVKQVQFDPESPETSK----EVNA 50

Query: 98  LFLKCQGVEGICWLQGISV-------INGKICIIMKFY-EGSVGDRMAQLKG-GKLSLSN 148
           L  + Q ++ +   + +         +   + I M+    GS+ D   QLK  G L+ + 
Sbjct: 51  LECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKD---QLKSYGALTENV 107

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
             +Y   + +G+  LHS  I+  ++K  N + +      LGD G    L  I L  + + 
Sbjct: 108 TRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMK 167

Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
              GTP +M+PE    E  G    + D W   C+++EMLT   P    +  E   A+ + 
Sbjct: 168 SVTGTPYWMSPEVISGEGYGR---KADIWSVGCTVVEMLTEKPP---WAEFEAMAAIFKI 221

Query: 269 QEIPPIPSGLPPAVENV---LLGCFEYDLRSRPLMTDILR 305
              P  P  LPP V +     L     + + RP   ++LR
Sbjct: 222 ATQPTNPV-LPPHVSDHCRDFLKRIFVEAKLRPSADELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 60.5 bits (147), Expect = 5e-10
 Identities = 62/286 (21%), Positives = 119/286 (41%), Gaps = 30/286 (10%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           LK   ++G G FG+V L   Y    D +   +VAVK L+   E++ R   ER  ++ L+ 
Sbjct: 6   LKFIKQLGEGHFGKVELC-RYDPLGD-NTGEQVAVKSLNHSGEEQHRSDFEREIEI-LRT 62

Query: 103 QGVEGICWLQGISVINGK--ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
              E I   +G+    G   + +IM++   GS+ D + + +  +++L  +  ++  + +G
Sbjct: 63  LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKG 121

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  L S+  +  +L   N ++   D   + D G+  +     LP       +  P   +P
Sbjct: 122 MDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV-----LPEDKDYYYVKEPG-ESP 175

Query: 220 EQW-QPEV--RGPISFETDSWGFACSIIEMLTGVQP------------RCGRSVDEIYDA 264
             W  PE       S  +D W F  ++ E+ T   P               +    +   
Sbjct: 176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235

Query: 265 VVRRQEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           +   +E    P P   P  V +++  C+E + + RP   D++ +  
Sbjct: 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 60.3 bits (146), Expect = 5e-10
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 22/192 (11%)

Query: 127 FYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 184
           F E   G  ++ L  K G    + +  Y   L +G+  LH   I+  ++K  N +++   
Sbjct: 81  FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG 140

Query: 185 RAV-LGDVGIPHLLLGIPLPSSDLPRR-------LGTPNYMAPEQWQPEVRGPISFETDS 236
           + + + D G    L      ++            LGT  +MAPE  + E  G      D 
Sbjct: 141 QRLRIADFGAAARL------AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSC---DV 191

Query: 237 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYD 293
           W   C IIEM T   P            + +       P IP  L P + +V L C E  
Sbjct: 192 WSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQ 251

Query: 294 LRSRPLMTDILR 305
              RP   ++L+
Sbjct: 252 PEDRPPSRELLK 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 59.6 bits (144), Expect = 8e-10
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 27/263 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-VLLERL---NDLFLKCQG 104
           +G G FG   L  H  S +          K    V++ R   VLL ++   N +  K + 
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFK-ES 66

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL---SNVFRYAIDLAQGIL 161
            E           +G + I+M++ +G  GD M ++K  +  L     + ++ + +  G+ 
Sbjct: 67  FEA----------DGHLYIVMEYCDG--GDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQ 114

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            +H K +L  ++K  N  L +  +  LGD G   LL     P +     +GTP Y+ PE 
Sbjct: 115 HIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS---PGAYACTYVGTPYYVPPEI 171

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
           W+     P + ++D W   C + E+ T   P    S   +   V  +    P+PS     
Sbjct: 172 WE---NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYE 227

Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           + +++   F+ + RSRP  T IL
Sbjct: 228 LRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 59.8 bits (145), Expect = 9e-10
 Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           ++   + L+  +G G FG+V+L   Y   E  ++   VAVK L     +  R   ER  +
Sbjct: 2   VQRDTIVLKRELGEGAFGKVFLGECY-HLEPENDKELVAVKTLKETASNDARKDFEREAE 60

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEG--------SVGDRMAQLKG-----GKL 144
           L L     E I    G+        ++ ++ E         S G   A LK      G+L
Sbjct: 61  L-LTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGEL 119

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 204
           +LS + + A+ +A G++ L S+  +  +L   N ++       +GD G+        + +
Sbjct: 120 TLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR-----DVYT 174

Query: 205 SDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +D  R  G    M P +W P    +    + E+D W F   + E+ T G QP  G S +E
Sbjct: 175 TDYYRVGGHT--MLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + + + + + +   P   P  V +++LGC++ D + R  + DI 
Sbjct: 233 VIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRINIKDIH 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 46/273 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDE--YHEVAVKIL-HPVKEDRMR--VLLERLN------- 96
           +G+G FGE   AT Y  TED     + EV +  L    + D +   V+L  L        
Sbjct: 8   LGKGAFGE---ATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAY 64

Query: 97  -DLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAI 154
            + F+                 +  + I M++  G ++ D++ + KG       V  Y  
Sbjct: 65  YNHFMD----------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLF 108

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---L 211
            +   +  +H  GIL  ++K  N  L +A    LGD GI  +L       S+       +
Sbjct: 109 QIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKIL------GSEYSMAETVV 162

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTP YM+PE  Q       +F++D W   C + E+LT  +     +   +   +V+    
Sbjct: 163 GTPYYMSPELCQGV---KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG-NY 218

Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            P+ S     + +++    + D   RP   ++L
Sbjct: 219 TPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 210
           YA +L  G+  L  + I+  +LKP N +L+  DR   G + I  L L + +P  +  R R
Sbjct: 107 YAAELCCGLEDLQRERIVYRDLKPENILLD--DR---GHIRISDLGLAVQIPEGETVRGR 161

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
           +GT  YMAPE    E     +F  D WG  C I EM+ G  P   R      + V RR
Sbjct: 162 VGTVGYMAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 49/267 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMR-------VLLERLNDL 98
           IG+G FG+V LA H     D   Y   AVK+L     +K+   +       VLL+ +   
Sbjct: 3   IGKGSFGKVLLAKH---KADGKFY---AVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP 56

Query: 99  FL-----KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-Y 152
           FL       Q  +             K+  ++ +  G  G+    L+  +       R Y
Sbjct: 57  FLVGLHYSFQTAD-------------KLYFVLDYVNG--GELFFHLQRERSFPEPRARFY 101

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
           A ++A  +  LHS  I+  +LKP N +L+     VL D G+     GI   S       G
Sbjct: 102 AAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK--EGIE-HSKTTSTFCG 158

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           TP Y+APE  + +   P     D W     + EML G+ P   R   E+YD ++ +    
Sbjct: 159 TPEYLAPEVLRKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK---- 211

Query: 273 P--IPSGLPPAVENVLLGCFEYDLRSR 297
           P  +   +  +  ++L G  + D   R
Sbjct: 212 PLRLKPNISVSARHLLEGLLQKDRTKR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 31/263 (11%)

Query: 41  SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
             L L   IG G FG V L   Y          +VAVK    +K D           +  
Sbjct: 6   QKLTLGEIIGEGEFGAV-LQGEYTG-------QKVAVKN---IKCDVTAQAFLEETAVMT 54

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
           K    + +  L G+ + NG + I+M+   +G++ + +       +S+  + ++++D+A+G
Sbjct: 55  KLHH-KNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEG 112

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  L SK ++  +L   N +++E   A + D G+  +              +G  N   P
Sbjct: 113 MEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV------------GSMGVDNSKLP 160

Query: 220 EQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            +W  PE       S ++D W +   + E+ + G  P    S+ E+ + V +   + P P
Sbjct: 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEP-P 219

Query: 276 SGLPPAVENVLLGCFEYDLRSRP 298
            G P  V  ++  C+E + + RP
Sbjct: 220 EGCPADVYVLMTSCWETEPKKRP 242

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 37/272 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE------DRMRVL 91
           I   +L+L  ++G G FGEVW+ T   +T+       VAVK L P         +  +++
Sbjct: 3   IPRESLQLIKKLGNGQFGEVWMGTWNGNTK-------VAVKTLKPGTMSPESFLEEAQIM 55

Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
            +  +D  ++   V          V    I I+ ++  +GS+ D +   +G  L L N+ 
Sbjct: 56  KKLRHDKLVQLYAV----------VSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLV 105

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
             A  +A G+  +     +  +L+  N ++ +     + D G+  L+       ++   R
Sbjct: 106 DMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLI-----EDNEYTAR 160

Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE     + G  + ++D W F   + E++T G  P  G +  E+ + V 
Sbjct: 161 QGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 217

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           R   +P  P   P ++  ++L C++ D   RP
Sbjct: 218 RGYRMP-CPQDCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 27/287 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    + L   +G+G FG V+           +    VA+K ++      MR  +E LN+
Sbjct: 3   LPREKITLIRELGQGSFGMVYEGL-AKGVVKGEPETRVAIKTVNE--NASMRERIEFLNE 59

Query: 98  L-FLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLK--------GGKLSLS 147
              +K      +  L G+        ++M+   +G +   +   +         G  +L 
Sbjct: 60  ASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQ 119

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
              + A ++A G+  L +K  +  +L   N ++ E     +GD G+   +       +D 
Sbjct: 120 KFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY-----ETDY 174

Query: 208 PRRLGT---P-NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
            R+ G    P  +MAPE  +    G  + ++D W F   + EM T   QP  G S +E+ 
Sbjct: 175 YRKGGKGLLPVRWMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVL 231

Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             V+    +   P   P  +  ++  C++Y+ + RP   +I+   K 
Sbjct: 232 KFVIDGGHLDL-PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 41/233 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRM-------RVLLERLNDL 98
           +G+G FG+V LA      +  DE +  A+KIL     +++D +       RVL  +    
Sbjct: 8   LGKGSFGKVMLA----ERKGTDELY--AIKILKKDVVIQDDDVECTMVEKRVLALQDKPP 61

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLA 157
           FL          L        ++  +M++  G  GD M  ++  GK        YA +++
Sbjct: 62  FLT--------QLHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFKEPQAVFYAAEIS 111

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTPN 215
            G+  LH +GI+  +LK  N +L+      + D G+   H++ G+   +       GTP+
Sbjct: 112 VGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTF-----CGTPD 166

Query: 216 YMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           Y+APE   +QP  +       D W +   + EML G  P  G   DE++ +++
Sbjct: 167 YIAPEIIAYQPYGK-----SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 214

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 57.4 bits (138), Expect = 5e-09
 Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 34/267 (12%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLKCQGVE 106
           RIG+G FGEV+      + E       VA+KI+     ED +  + + +  +  +C    
Sbjct: 11  RIGKGSFGEVYKGIDNRTKE------VVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDS-P 62

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            I    G  +   K+ IIM++  G  G  +  LK G L  + +     ++ +G+  LHS+
Sbjct: 63  YITRYYGSYLKGTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREILKGLDYLHSE 120

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
             +  ++K  N +L+E     L D G+   L    +  +     +GTP +MAPE  +   
Sbjct: 121 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK--- 174

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE--- 283
           +    F+ D W    + IE+  G  P            +   + +  IP   PP +E   
Sbjct: 175 QSAYDFKADIWSLGITAIELAKGEPP---------NSDLHPMRVLFLIPKNSPPTLEGQY 225

Query: 284 -----NVLLGCFEYDLRSRPLMTDILR 305
                  +  C   D R RP   ++L+
Sbjct: 226 SKPFKEFVEACLNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 57.2 bits (138), Expect = 5e-09
 Identities = 74/288 (25%), Positives = 113/288 (39%), Gaps = 45/288 (15%)

Query: 37  WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPV---KEDRMRVL 91
           WIK +       IG G FG V+L  +  S E       +AVK   L  V    +DR R +
Sbjct: 2   WIKGAL------IGSGSFGSVYLGMNASSGE------LMAVKQVELPSVSASSKDRKRSM 49

Query: 92  LERLND--LFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSN 148
           L+ L      LK    E I    G S+    + I +++  G SV   +     G    + 
Sbjct: 50  LDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETL 107

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
           V  +   + +G+  LH++GI+  ++K  N +++      + D GI   L      S    
Sbjct: 108 VRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKL---EANSLSTK 164

Query: 209 RRLGTPNYMAPEQWQ-PEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
                P+      W  PEV    S+  + D W   C ++EMLTG  P         +   
Sbjct: 165 TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP---------FPDC 215

Query: 266 VRRQEI--------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            + Q I        P IPS +     + L   FE D   RP   ++L+
Sbjct: 216 TQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 57.3 bits (139), Expect = 5e-09
 Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 39/224 (17%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +L  RIG G +G+V+ A    + E       VA+K+          + LE  +D  +  Q
Sbjct: 6   ELIQRIGSGTYGDVYKARDIATGE------LVAIKV----------IKLEPGDDFEIIQQ 49

Query: 104 GVE--------GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKG--GKLSLSNVFRY 152
            +          I    G  +   K+ I+M++  G S+ D     +G   +L ++ V R 
Sbjct: 50  EISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRE 109

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-- 210
            +   +G+  LH  G +  ++K  N +L E     L D G+   L      ++ + +R  
Sbjct: 110 TL---KGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQL------TATIAKRKS 160

Query: 211 -LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 253
            +GTP +MAPE    E +G    + D W    + IE+     P 
Sbjct: 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPM 204

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 57.5 bits (139), Expect = 7e-09
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 45/234 (19%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
           +G+G FG+V LA    +    DE +  A+KIL   K+D   V+++   D  ++C  VE  
Sbjct: 8   LGKGSFGKVMLAERKGT----DELY--AIKIL---KKD---VIIQ---DDDVECTMVEKR 52

Query: 108 ----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDL 156
                     +  L        ++  +M++  G  GD M  ++  GK    +   YA ++
Sbjct: 53  VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGKFKEPHAVFYAAEI 110

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI--PHLLLGIPLPSSDLPRRL-GT 213
           A G+  LHSKGI+  +LK  N +L+      + D G+   ++  G         R   GT
Sbjct: 111 AIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG------KTTRTFCGT 164

Query: 214 PNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
           P+Y+APE   +QP  +       D W F   + EML G  P  G   DE++ ++
Sbjct: 165 PDYIAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI 213

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 56.9 bits (137), Expect = 8e-09
 Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 33/284 (11%)

Query: 41  SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           SA++    +G   FG+++    YL     D    VA+K L  +   +     ++   L  
Sbjct: 5   SAVRFMEELGECAFGKIYKGHLYLP--GMDHAQLVAIKTLKDINNPQQWGEFQQEASLMA 62

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-----------------GSVGDRMAQLKGGK 143
           +      +C L G+      +C++ ++                   G   D    +K   
Sbjct: 63  ELHHPNIVCLL-GVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKS-S 120

Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 203
           L   +    AI +A G+  L S   +  +L   N ++ E     + D+G     L   + 
Sbjct: 121 LDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG-----LSREIY 175

Query: 204 SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
           S+D  R    P  + P +W P    + G  S ++D W F   + E+ + G+QP  G S  
Sbjct: 176 SADYYRV--QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ 233

Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           E+ + +VR++++ P     PP + +++  C++     RP   DI
Sbjct: 234 EVIE-MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.9 bits (137), Expect = 9e-09
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 21/226 (9%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IG+G FG+V LA   L   D   Y   AVK+L       ++++  ++ ER  ++ LK   
Sbjct: 3   IGKGSFGKVLLAKRKL---DGKCY---AVKVLQKKIVLNRKEQKHIMAER--NVLLKNVK 54

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQL 163
              +  L        K+  ++ F  G  G+    L+  +       R YA ++A  +  L
Sbjct: 55  HPFLVGLHYSFQTTEKLYFVLDFVNG--GELFFHLQRERSFPEPRARFYAAEIASALGYL 112

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS  I+  +LKP N +L+     VL D G+    +     ++      GTP Y+APE  +
Sbjct: 113 HSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF---CGTPEYLAPEVIR 169

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
            +   P     D W     + EML G+ P   R V E+YD ++ + 
Sbjct: 170 KQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 22/274 (8%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFL 100
            ++  +IGRG F EV+ AT  L      +   VA+K +    + + + R    +  DL L
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLL------DGVPVALKKVQIFDLMDAKARADCIKEIDL-L 56

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK--LSLSNVFRYAIDLA 157
           K      +       + + ++ I+++  + G +   +   K  K  +    V++Y + L 
Sbjct: 57  KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             +  +HS+ ++  ++KP N  +       LGD+G+          +  L   +GTP YM
Sbjct: 117 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYM 173

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV--VRRQEIPPIP 275
           +PE+         +F++D W   C + EM     P  G  ++ +Y     + + + PP+P
Sbjct: 174 SPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPLP 229

Query: 276 SG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           S      +  ++  C   D   RP +T +  V K
Sbjct: 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 55.7 bits (135), Expect = 2e-08
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 27/202 (13%)

Query: 118 NGKICIIMKFYEGSVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLH--------S 165
           N  + I+M++ EG  GD +AQL    K  +  +   F + I L Q +L L+         
Sbjct: 73  NQTLYIVMEYCEG--GD-LAQLIQKCKKERKYIEEEFIWRI-LTQLLLALYECHNRSDPG 128

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQ 223
             +L  +LKP N  L+  +   LGD G     L   L       +  +GTP YM+PEQ  
Sbjct: 129 NTVLHRDLKPANIFLDANNNVKLGDFG-----LAKILGHDSSFAKTYVGTPYYMSPEQLN 183

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
                    ++D W   C I E+     P   R+  ++  + ++  +   IP      + 
Sbjct: 184 ---HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL-ASKIKEGKFRRIPYRYSSELN 239

Query: 284 NVLLGCFEYDLRSRPLMTDILR 305
            V+      D   RP   ++L+
Sbjct: 240 EVIKSMLNVDPDKRPSTEELLQ 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 23/244 (9%)

Query: 41  SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDL 98
           +  ++  +IGRG F EV+ AT  L  +       VA+K +    + + + R    +  DL
Sbjct: 2   ANFQIEKKIGRGQFSEVYRATCLLDRK------PVALKKVQIFEMMDAKARQDCVKEIDL 55

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYA 153
             +      I +L    + + ++ I+++      GD    +K  K     +    V++Y 
Sbjct: 56  LKQLNHPNVIKYLDSF-IEDNELNIVLEL--ADAGDLSQMIKYFKKQKRLIPERTVWKYF 112

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
           + L   +  +HS+ ++  ++KP N  +       LGD+G+          +  L   +GT
Sbjct: 113 VQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGT 169

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEIP 272
           P YM+PE+         +F++D W   C + EM     P  G  ++       + + + P
Sbjct: 170 PYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP 226

Query: 273 PIPS 276
           P+P+
Sbjct: 227 PLPT 230

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 23/192 (11%)

Query: 124 IMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 182
           +M++  G  GD M  ++   K  L     YA ++  G+  LHSKGI+  +LK  N +L+ 
Sbjct: 74  VMEYLNG--GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT 131

Query: 183 ADRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 241
                + D G+    +LG     +      GTP+Y+APE    +         D W F  
Sbjct: 132 DGHIKIADFGMCKENMLG----DAKTCTFCGTPDYIAPEILLGQKYN---TSVDWWSFGV 184

Query: 242 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------E 291
            + EML G  P  G   +E++ ++  R + P  P  L    +++L+  F          +
Sbjct: 185 LLYEMLIGQSPFHGHDEEELFQSI--RMDNPCYPRWLTREAKDILVKLFVREPERRLGVK 242

Query: 292 YDLRSRPLMTDI 303
            D+R  P   +I
Sbjct: 243 GDIRQHPFFREI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 35/268 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-----RMRVLLERLNDLFLKCQ 103
           +G+G FGEV+  T    T        VAVK     KED     +++ L E      LK  
Sbjct: 3   LGKGNFGEVFKGTLKDKTP-------VAVKT---CKEDLPQELKIKFLSEAR---ILKQY 49

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK--LSLSNVFRYAIDLAQGIL 161
               I  L G+      I I+M+   G  GD ++ L+  K  L    + ++A+D A G+ 
Sbjct: 50  DHPNIVKLIGVCTQRQPIYIVMELVPG--GDFLSFLRKKKDELKTKQLVKFALDAAAGMA 107

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            L SK  +  +L   N ++ E +   + D G+          SS L +         P +
Sbjct: 108 YLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ--------IPIK 159

Query: 222 WQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           W  PE    G  S E+D W +   + E  + GV P  G +  +  + V +   +   P  
Sbjct: 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM-SCPQK 218

Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDILR 305
            P  V  V+  C++Y   +RP  +++ +
Sbjct: 219 CPDDVYKVMQRCWDYKPENRPKFSELQK 246

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 24/209 (11%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 27  KIGEGSTGIVCIATVKSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 78

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F EG ++ D +   +  +  ++ V    + + + +  LH++
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLKALSVLHAQ 135

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D G    +      S ++PRR   +GTP +MAPE   
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKSLVGTPYWMAPELIS 189

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
              R P   E D W     +IEM+ G  P
Sbjct: 190 ---RLPYGPEVDIWSLGIMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 26/278 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I   +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E    
Sbjct: 3   IPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQEA--- 52

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             +K    E +  L  + V    I I+ ++  +GS+ D +    G  L L  +   A  +
Sbjct: 53  QVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI 111

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP-- 214
           A G+  +     +  +L+  N ++ E     + D G+  L     +  ++   R G    
Sbjct: 112 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFP 166

Query: 215 -NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 272
             + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R   + 
Sbjct: 167 IKWTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM- 222

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 223 PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 259

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 54.7 bits (131), Expect = 4e-08
 Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 27/230 (11%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +A    S        +VAVK++   K+ R  +L   +  + ++    + 
Sbjct: 28  KIGEGSTGIVCIAREKHSGR------QVAVKMMDLRKQQRRELLFNEV--VIMRDYQHQN 79

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F +G ++ D ++Q +  +  ++ V    +   Q +  LHS+
Sbjct: 80  VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVL---QALCYLHSQ 136

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D G    +      S D+P+R   +GTP +MAPE   
Sbjct: 137 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKSLVGTPYWMAPEVIS 190

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
              R P   E D W     +IEM+ G  P      D    A+ R ++ PP
Sbjct: 191 ---RTPYGTEVDIWSLGIMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 234

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 54.0 bits (130), Expect = 7e-08
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 123 IIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
           ++M++  G  G+  + L+  G+ S S    YA ++   +  LHSK I+  +LKP N +L+
Sbjct: 78  MLMEYVPG--GELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD 135

Query: 182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           +     L D G    L        D    L GTP Y+APE  Q +         D W   
Sbjct: 136 KEGHIKLTDFGFAKKL-------RDRTWTLCGTPEYLAPEVIQSKGHNK---AVDWWALG 185

Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVV 266
             I EML G  P    +   IY+ ++
Sbjct: 186 ILIYEMLVGYPPFFDDNPFGIYEKIL 211

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 34/298 (11%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERL 95
           IK   + L+  +G G FG+V+LA  Y  +   D+   VAVK L   K+  +  R   +R 
Sbjct: 2   IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKML-VAVKAL---KDPTLAARKDFQRE 57

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIM---------KFYEGSVGDRMAQLKG----- 141
            +L    Q  E I    G+      + ++          KF      D M  + G     
Sbjct: 58  AELLTNLQH-EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 116

Query: 142 -GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
            G+L LS +   A  +A G++ L S+  +  +L   N ++       +GD G+       
Sbjct: 117 KGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----- 171

Query: 201 PLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
            + S+D  R  G  + M P +W P    +    + E+D W F   + E+ T G QP    
Sbjct: 172 DVYSTDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 229

Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWT 314
           S  E+ + + + + +   P   P  V +++LGC++ + + R  + +I ++  + G  T
Sbjct: 230 SNTEVIECITQGRVLER-PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 53.5 bits (129), Expect = 8e-08
 Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 37/270 (13%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLK 101
           L+    +G G  G V    H  +         +AVK +   + E   + +L  L D+  K
Sbjct: 3   LEYLGELGAGNSGVVSKVLHRPTG------KIMAVKTIRLEINEAIQKQILREL-DILHK 55

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
           C     I    G    NG I I M++ +G   D++ +   G++    + + A+ + +G+ 
Sbjct: 56  CNS-PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLT 114

Query: 162 QLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-----GTPN 215
            LH K  I+  ++KP N ++N   +  L D G+          S  L   L     GT +
Sbjct: 115 YLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGV----------SGQLVNSLAKTFVGTSS 164

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYD---AVVRRQE 270
           YMAPE+ Q       S   D W    S+IE+ TG  P        D I++    +V   E
Sbjct: 165 YMAPERIQGNDYSVKS---DIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV--NE 219

Query: 271 IPP-IPSG-LPPAVENVLLGCFEYDLRSRP 298
            PP +PSG   P  ++ +  C   D R RP
Sbjct: 220 PPPRLPSGKFSPDFQDFVNLCLIKDPRERP 249

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 53.9 bits (130), Expect = 9e-08
 Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
           +C +M++  G  GD M  +     S      YA  +  G+  LH   I+  +LK  N +L
Sbjct: 77  VCFVMEYAAG--GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL 134

Query: 181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET------ 234
           +      + D G+    +G            GTP ++APE         +  ET      
Sbjct: 135 DTEGFVKIADFGLCKEGMG---FGDRTSTFCGTPEFLAPE---------VLTETSYTRAV 182

Query: 235 DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           D WG    I EML G  P  G   +E++D++V
Sbjct: 183 DWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV 214

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 24/209 (11%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   +        +VAVK +   K+ R  +L   +  + ++      
Sbjct: 26  KIGEGSTGIVCIATDKSTGR------QVAVKKMDLRKQQRRELLFNEV--VIMRDYQHPN 77

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  +    ++  ++ ++M+F EG ++ D +   +  +  ++ V    +   + +  LH++
Sbjct: 78  IVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVL---KALSFLHAQ 134

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D G    +      S ++PRR   +GTP +MAPE   
Sbjct: 135 GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV------SKEVPRRKSLVGTPYWMAPEVIS 188

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
              R P   E D W     +IEM+ G  P
Sbjct: 189 ---RLPYGTEVDIWSLGIMVIEMVDGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 30/270 (11%)

Query: 37  WIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLE 93
           W  P   LKL  ++G G FGEVW+  +       + + +VA+K L   K+  M     L 
Sbjct: 1   WEVPRETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSL---KQGSMSPEAFLA 50

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRY 152
             N   +K      +  L  + V    I II ++ E GS+ D +   +G KL+++ +   
Sbjct: 51  EAN--LMKQLQHPRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDM 107

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
           A  +A+G+  +  K  +  +L+  N +++E     + D G+  L     +  ++   R G
Sbjct: 108 AAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARL-----IEDNEYTAREG 162

Query: 213 TPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
                 P +W  PE    G  + ++D W F   + E++T G  P  G +  E+   + R 
Sbjct: 163 AK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG 219

Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             + P P   P  +  ++  C++     RP
Sbjct: 220 YRM-PRPDNCPEELYELMRLCWKEKPEERP 248

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 54.9 bits (132), Expect = 1e-07
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 19/134 (14%)

Query: 164 HSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGIPLPSSDLPRR----LGTPNY 216
           H++GI+  +LKP N ++++      A + D GI  LL G+         R    LGTP Y
Sbjct: 96  HNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTY 155

Query: 217 MAPEQWQPEVRGPISFETD--SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI 274
            APEQ + E   P++  +D  +WG     +E LTG +   G SV EI       Q++ P+
Sbjct: 156 CAPEQLRGE---PVTPNSDLYAWGLI--FLECLTGQRVVQGASVAEIL-----YQQLSPV 205

Query: 275 PSGLPPAVENVLLG 288
              LPP +    LG
Sbjct: 206 DVSLPPWIAGHPLG 219

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 37/272 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE------DRMRVL 91
           I   +L+L  ++G+G FGEVW+ T   +T+       VA+K L P            +++
Sbjct: 3   IPRESLRLDVKLGQGCFGEVWMGTWNGTTK-------VAIKTLKPGTMMPEAFLQEAQIM 55

Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
            +  +D  +    V          V    I I+ +F  +GS+ D + +  G  L L  + 
Sbjct: 56  KKLRHDKLVPLYAV----------VSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLV 105

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
             A  +A G+  +     +  +L+  N ++ +     + D G+  L+       ++   R
Sbjct: 106 DMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLI-----EDNEYTAR 160

Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE     + G  + ++D W F   + E++T G  P  G    E+ + V 
Sbjct: 161 QGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE 217

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           R   +P  P G P ++  ++  C++ D   RP
Sbjct: 218 RGYRMP-CPQGCPESLHELMKLCWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 24/209 (11%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   + +      +VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 29  KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFNEV--VIMRDYHHEN 80

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F EG ++ D +   +  +  ++ V    + + + +  LH++
Sbjct: 81  VVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQ 137

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D G    +      S ++P+R   +GTP +MAPE   
Sbjct: 138 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV------SKEVPKRKSLVGTPYWMAPEVIS 191

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
              R P   E D W     +IEM+ G  P
Sbjct: 192 ---RLPYGTEVDIWSLGIMVIEMIDGEPP 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 56/282 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--------VKEDR-M 88
           I   +LKL  ++G G FGEVW+ T   +T       +VAVK L P        ++E + M
Sbjct: 3   IPRESLKLERKLGAGQFGEVWMGTWNGTT-------KVAVKTLKPGTMSPEAFLQEAQIM 55

Query: 89  RVLL-ERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSL 146
           + L  ++L  L+  C   E              I I+ ++   GS+ D +   +G KL L
Sbjct: 56  KKLRHDKLVQLYAVCSEEE-------------PIYIVTEYMSKGSLLDFLKSGEGKKLRL 102

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             +   A  +A+G+  L S+  +  +L   N ++ E     + D G              
Sbjct: 103 PQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFG-------------- 148

Query: 207 LPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
           L R +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G 
Sbjct: 149 LARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM 208

Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +  E+ + V R   + P P   P  + +++L C++ D   RP
Sbjct: 209 TNREVLEQVERGYRM-PRPPNCPEELYDLMLQCWDKDPEERP 249

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 64/278 (23%), Positives = 110/278 (39%), Gaps = 45/278 (16%)

Query: 37  WIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W +P     L  ++G G FGEVW                VA+KIL   K D +       
Sbjct: 1   WERPREEFTLERKLGSGYFGEVWEGLWKNRVR-------VAIKIL---KSDDLLKQ---- 46

Query: 96  NDLFLKCQGVEG-----ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNV 149
            D   + Q ++      +  L  +  +   + II +  E GS+   +   +G  L ++++
Sbjct: 47  QDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASL 106

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
              A  +A+G+  L  +  +  +L   N ++ E     + D G              L R
Sbjct: 107 IDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG--------------LAR 152

Query: 210 RLGTPNYMA-----PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
            +    Y++     P +W  PE    G  S ++D W F   + EM T G  P  G +  E
Sbjct: 153 LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE 212

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +YD +     +P  P+  P  +  ++L C+  +   RP
Sbjct: 213 VYDQITAGYRMPC-PAKCPQEIYKIMLECWAAEPEDRP 249

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 28/273 (10%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           ++   L+    +G G  G V    H  +         +A K++H   +  +R  + R   
Sbjct: 2   LRNEDLETISDLGAGNGGSVSKVKHIPTGT------VMAKKVVHIGAKSSVRKQILRELQ 55

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           +  +C+    I    G  +    IC+ M+F +    DR+ + KGG + +  + + A+ + 
Sbjct: 56  IMHECRS-PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVV 113

Query: 158 QGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           +G+  L++   I+  ++KP N ++N   +  L D G+   L+     +S     +GT  Y
Sbjct: 114 EGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI-----NSIADTFVGTSTY 168

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE--------IYDAVVR- 267
           M+PE+ Q    G  + ++D W    SIIE+  G  P    ++D+        I D + + 
Sbjct: 169 MSPERIQG---GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI 225

Query: 268 RQEIPP-IPSG-LPPAVENVLLGCFEYDLRSRP 298
            QE PP +PS   P  + + +  C   D   RP
Sbjct: 226 VQEPPPRLPSSDFPEDLRDFVDACLLKDPTERP 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 31/285 (10%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           IK   + L+  +G G FG+V+LA  H L  E   +   VAVK L    E   R   +R  
Sbjct: 2   IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQ--DKMLVAVKALKEASES-ARQDFQREA 58

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
           +L    Q  + I    G+      + ++ ++      +R  +  G              G
Sbjct: 59  ELLTVLQH-QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPG 117

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
           +L+L  +   A  +A G++ L S   +  +L   N ++ +     +GD G+        +
Sbjct: 118 QLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DI 172

Query: 203 PSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
            S+D  R  G    M P +W P    +    + E+D W F   + E+ T G QP    S 
Sbjct: 173 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230

Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            E  + + + +E+   P   PP V  ++ GC++ + + R ++ DI
Sbjct: 231 TEAIECITQGRELER-PRTCPPEVYAIMQGCWQREPQQRMVIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD-LPRR 210
           YA ++  G+  LH + I+  +LKP N +L++     + D+G     L + +P    +  R
Sbjct: 107 YAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLG-----LAVHVPEGQTIKGR 161

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 36/268 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERLNDLFLKCQGVE 106
           +GRG FG V L           +   V +K +    + +D           +        
Sbjct: 8   VGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQNECQ-VLKLLSHPN 60

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHS 165
            I + +   + +  + I+M++  G       Q +    L    +  + + +   +  +H+
Sbjct: 61  IIEYYENF-LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119

Query: 166 KGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQP 224
           K IL  +LK  N +L++    V +GD GI  +L       S     +GTP Y++PE  + 
Sbjct: 120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS----KSKAYTVVGTPCYISPELCEG 175

Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV--------VRRQEIPPIPS 276
           +   P + ++D W   C + E+          S+   ++A         +      PI  
Sbjct: 176 K---PYNQKSDIWALGCVLYELA---------SLKRAFEAANLPALVLKIMSGTFAPISD 223

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDIL 304
              P +  ++L     D   RP ++ I+
Sbjct: 224 RYSPDLRQLILSMLNLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 52.1 bits (125), Expect = 4e-07
 Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 44/251 (17%)

Query: 30  TSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR 89
           T  DT++W K S  ++   +G G FG V +A H  +     EY   A+K L   +  +M+
Sbjct: 8   TKPDTSSW-KLSDFEMGETLGTGSFGRVRIAKHKGT----GEY--YAIKCLKKREILKMK 60

Query: 90  ---------VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL- 139
                     +L  L+  F+    V  +C  Q       ++  +++F  G  G+    L 
Sbjct: 61  QVQHVAQEKSILMELSHPFI----VNMMCSFQD----ENRVYFLLEFVVG--GELFTHLR 110

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 199
           K G+        Y  +L      LHSK I+  +LKP N +L+      + D G       
Sbjct: 111 KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGF------ 164

Query: 200 IPLPSSDLPRRL----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG 255
               +  +P R     GTP Y+APE  Q +  G      D W     + E + G  P   
Sbjct: 165 ----AKKVPDRTFTLCGTPEYLAPEVIQSKGHGK---AVDWWTMGVLLYEFIAGYPPFFD 217

Query: 256 RSVDEIYDAVV 266
            +   IY+ ++
Sbjct: 218 DTPFRIYEKIL 228

Length = 329

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 51.5 bits (123), Expect = 4e-07
 Identities = 66/286 (23%), Positives = 108/286 (37%), Gaps = 51/286 (17%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLAT--------------HYLSTEDCDEYHEVAVKILHPV 83
           I PS L L   IG G FG VWL                  +S ED  E  +V +K+ HP 
Sbjct: 1   IHPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHP- 59

Query: 84  KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
                     +L  L+             G+      IC++ +F E        + + GK
Sbjct: 60  ----------KLVQLY-------------GVCTERSPICLVFEFMEHGCLSDYLRAQRGK 96

Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 203
            S   +    +D+ +G+  L S  ++  +L   N ++ E     + D G+   +L     
Sbjct: 97  FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156

Query: 204 SSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
           SS      GT     P +W  PEV      S ++D W F   + E+ + G  P   RS  
Sbjct: 157 SST-----GTK---FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS 208

Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           E+ + +     +   P     +V  ++  C++     RP  + +L 
Sbjct: 209 EVVETINAGFRLYK-PRLASQSVYELMQHCWKERPEDRPSFSLLLH 253

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 41/276 (14%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W I  ++++L  ++G G FGEVW      +T        VAVK L P     M       
Sbjct: 1   WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTP-------VAVKTLKP---GTMDP----- 45

Query: 96  NDLFLKCQGV------EGICWLQGISVINGKICII---MKFYEGSVGDRMAQLKGGKLSL 146
              FL    +        +  L  +  +   I I+   MK+  GS+ + +    G  L L
Sbjct: 46  -KDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY--GSLLEYLQGGAGRALKL 102

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             +   A  +A G+  L ++  +  +L   N ++ E +   + D G+  ++         
Sbjct: 103 PQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIK-----EDI 157

Query: 207 LPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
              R G      P +W  PE       S ++D W F   + E++T G  P  G +  E+ 
Sbjct: 158 YEAREGAK---FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL 214

Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             V +   +P  P G P  + +++L C++ D   RP
Sbjct: 215 QQVDQGYRMPC-PPGCPKELYDIMLDCWKEDPDDRP 249

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 52.0 bits (124), Expect = 5e-07
 Identities = 73/274 (26%), Positives = 104/274 (37%), Gaps = 63/274 (22%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV L       +  D  H  A+KIL       KE    +  ER  D+ ++  G
Sbjct: 9   IGRGAFGEVRL------VQKKDTGHIYAMKILRKADMLEKEQVAHIRAER--DILVEADG 60

Query: 105 VEGICWLQGI--SVINGK-ICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGI 160
                W+  +  S  + + + +IM+F  G  GD M  L K   LS      Y  +    I
Sbjct: 61  A----WVVKMFYSFQDKRNLYLIMEFLPG--GDMMTLLMKKDTLSEEATQFYIAETVLAI 114

Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-------------PSSDL 207
             +H  G +  ++KP N +L+      L D G   L  G+               P SD 
Sbjct: 115 DAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFG---LCTGLKKAHRTEFYRNLTHNPPSDF 171

Query: 208 P----------------RR------LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 245
                            RR      +GTP+Y+APE +       +    D W     + E
Sbjct: 172 SFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL---CDWWSLGVIMYE 228

Query: 246 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
           ML G  P C  +  E Y  V+  +E    P  +P
Sbjct: 229 MLIGYPPFCSETPQETYRKVMNWKETLVFPPEVP 262

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (122), Expect = 6e-07
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 13/181 (7%)

Query: 119 GKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
            K+ +++ F  G  G+    L + G+  LS    Y  +L   +  LH   ++  +LKP N
Sbjct: 66  EKLYLVLAFING--GELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPEN 123

Query: 178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDS 236
            +L+      L D G    L  + +   D      GTP Y+APE              D 
Sbjct: 124 ILLDYQGHIALCDFG----LCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA---VDW 176

Query: 237 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
           W     + EMLTG+ P    +V+E+Y  ++  QE    P G     +++L+G    D   
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKIL--QEPLRFPDGFDRDAKDLLIGLLSRDPTR 234

Query: 297 R 297
           R
Sbjct: 235 R 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 50.7 bits (121), Expect = 7e-07
 Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 27/269 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLN---DLFLKCQ 103
           +G+G +G V+           ++   +AVK   L            E+L    DL    +
Sbjct: 8   LGKGAYGTVYCGL-------TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60

Query: 104 GVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
            V  + +L G  + +  I I M+F  G S+   + +   G L      +Y   +  G+  
Sbjct: 61  HVNIVQYL-GTCLDDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAY 117

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL--LGIPLPSSDLPRRL-GTPNYMAP 219
           LH+  ++  ++K  N +L       L D G    L  +G+    S++ + + GTP +MAP
Sbjct: 118 LHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDAVVRRQEIPPIPS 276
           E       G  S   D W   C++ EM TG  P    S+D    ++     R  +P +P 
Sbjct: 178 EVINESGYGRKS---DIWSIGCTVFEMATGKPPLA--SMDRLAAMFYIGAHRGLMPRLPD 232

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILR 305
               A  + +  C   D   RP    +LR
Sbjct: 233 SFSAAAIDFVTSCLTRDQHERPSALQLLR 261

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.4 bits (120), Expect = 8e-07
 Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 27/270 (10%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK----ILHPVKEDRMRVLLERLNDLFLKCQ 103
           RIGRG FGEV+  +  L  ++      VAVK     L P  + + + L E      LK  
Sbjct: 2   RIGRGNFGEVF--SGRLRADNT----PVAVKSCRETLPP--DLKAKFLQEAR---ILKQY 50

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               I  L G+      I I+M+  +G       + +G +L +  + +   + A G+  L
Sbjct: 51  SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYL 110

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
            SK  +  +L   N ++ E +   + D G+          S+   +++       P +W 
Sbjct: 111 ESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI-------PVKWT 163

Query: 224 -PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
            PE    G  S E+D W F   + E  + G  P    S  +  +A+ +   +P  P   P
Sbjct: 164 APEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPC-PELCP 222

Query: 280 PAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            AV  ++  C+EYD   RP  + + +  +S
Sbjct: 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 51.2 bits (122), Expect = 9e-07
 Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 64/292 (21%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV L       +  D  H  A+KIL       KE    +  ER  D+ ++   
Sbjct: 9   IGRGAFGEVRL------VQKKDTGHVYAMKILRKADMLEKEQVGHIRAER--DILVEADS 60

Query: 105 VEGICWLQGI-----SVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
           +    W+  +       +N  + +IM+F  G  GD M  L K   L+      Y  +   
Sbjct: 61  L----WVVKMFYSFQDKLN--LYLIMEFLPG--GDMMTLLMKKDTLTEEETQFYIAETVL 112

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL-----------LGIPLPSS-- 205
            I  +H  G +  ++KP N +L+      L D G+   L           L   LPS   
Sbjct: 113 AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFT 172

Query: 206 -------------DLPRR------LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
                           RR      +GTP+Y+APE +       +    D W     + EM
Sbjct: 173 FQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKL---CDWWSLGVIMYEM 229

Query: 247 LTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP---PAVENVLLGCFEYDLR 295
           L G  P C  +  E Y  V+  +E    P  +P    A + +L  C E++ R
Sbjct: 230 LIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHR 281

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 50.6 bits (121), Expect = 9e-07
 Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 34/203 (16%)

Query: 118 NGKICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNL 173
           N ++ I+M   EG  +G+    LK    + +   ++   + +   +  LH  K I+  +L
Sbjct: 81  NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDL 140

Query: 174 KPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFE 233
            P N +L E D+  + D G    L     P S L   +GT  Y  PE  + E   P   +
Sbjct: 141 TPNNIMLGEDDKVTITDFG----LAKQKQPESKLTSVVGTILYSCPEIVKNE---PYGEK 193

Query: 234 TDSWGFACSIIEMLTGVQP---------RCGRSVDEIYDAVVRRQEIPPIPSGL-PPAVE 283
            D W F C + +M T +QP            + V+ +Y+         P+P G+    V 
Sbjct: 194 ADVWAFGCILYQMCT-LQPPFYSTNMLSLATKIVEAVYE---------PLPEGMYSEDVT 243

Query: 284 NVLLGCFEYDLRSRPLMTDILRV 306
           +V+  C   D  +RP   DI++V
Sbjct: 244 DVITSCLTPDAEARP---DIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 41/221 (18%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLERLNDLF-LKCQGV 105
            IG+G FGEV+ A     T        VA+K++   + ED +  + + +  L   +   +
Sbjct: 8   CIGKGSFGEVYKA-IDKRTNQ-----VVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYI 61

Query: 106 ---EGICWLQGISVING-KICIIMKFYE-GSVGDRMAQLKGGKL---SLSNVFRYAIDLA 157
               G       S + G K+ IIM++   GS  D    LK GKL    ++ + R   ++ 
Sbjct: 62  TKYYG-------SFLKGSKLWIIMEYCGGGSCLD---LLKPGKLDETYIAFILR---EVL 108

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTP 214
            G+  LH +G +  ++K  N +L+E     L D G+   L      +S + +R   +GTP
Sbjct: 109 LGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQL------TSTMSKRNTFVGTP 162

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG 255
            +MAPE  +   +     + D W    + IE+  G  P   
Sbjct: 163 FWMAPEVIK---QSGYDEKADIWSLGITAIELAKGEPPLSD 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 27/258 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV+           D     A+K L      +K+     L ER+    +    
Sbjct: 2   IGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 55

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQL 163
              I  +        K+C I+    G  GD    L + G  S   +  YA ++  G+  +
Sbjct: 56  CPFIVCMTYAFHTPDKLCFILDLMNG--GDLHYHLSQHGVFSEKEMRFYATEIILGLEHM 113

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           H++ ++  +LKP N +L+E     + D+G     L            +GT  YMAPE  Q
Sbjct: 114 HNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMAPEVLQ 168

Query: 224 PEVRGPISFETDSW-GFACSIIEMLTGVQP-RCGRSVD--EIYDAVVRRQEIPPIPSGLP 279
              +G     +  W    C + ++L G  P R  ++ D  EI D +     +  +P    
Sbjct: 169 ---KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTVNV-ELPDSFS 223

Query: 280 PAVENVLLGCFEYDLRSR 297
           P ++++L G  + D+  R
Sbjct: 224 PELKSLLEGLLQRDVSKR 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 37/276 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERL 95
              + L+    IG G  G+V+      +       H +AVK +     KE+  R+L++  
Sbjct: 12  ADLNDLENLGEIGSGTCGQVYKMRFKKTG------HVMAVKQMRRTGNKEENKRILMDL- 64

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-------GKLSLSN 148
            D+ LK      I    G  + +  + I M+     +   + +++G       GK++++ 
Sbjct: 65  -DVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAI 123

Query: 149 VFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
           V        + +  L  K G++  ++KP N +L+ +    L D GI   L+     S   
Sbjct: 124 V--------KALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD----SKAK 171

Query: 208 PRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAV 265
            R  G   YMAPE+  P    P      D W    S++E+ TG  P      + E+   +
Sbjct: 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKI 231

Query: 266 VRRQEIPPIPS---GLPPAVENVLLGCFEYDLRSRP 298
           +  QE PP      G  P   + +  C   D R RP
Sbjct: 232 L--QEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRP 265

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 53/224 (23%), Positives = 84/224 (37%), Gaps = 56/224 (25%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------R-MRVLLERLNDL 98
           ++G G +G V+ A      +   E   VA+K +    E+        R + +L E     
Sbjct: 6   KLGEGTYGVVYKARD----KKTGEI--VALKKIRLDNEEEGIPSTALREISLLKE----- 54

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
            LK      I  L  +     K+ ++ ++ +  +   + + + G LS + +      L +
Sbjct: 55  -LKH---PNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDK-RPGPLSPNLIKSIMYQLLR 109

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL--LLGIPLPSSDLPRRLGTPN- 215
           G+   HS  IL  +LKP N ++N      L D G   L    GIPL +        T   
Sbjct: 110 GLAYCHSHRILHRDLKPQNILINRDGVLKLADFG---LARAFGIPLRTY-------THEV 159

Query: 216 ----YMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTG 249
               Y APE       +   V        D W   C   EM+TG
Sbjct: 160 VTLWYRAPEILLGSKHYSTAV--------DIWSVGCIFAEMITG 195

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 120 KICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           ++ +++++  G  GD M  + +  KL   +   YA ++   +  LH +GI+  +LK  N 
Sbjct: 70  RLFLVIEYVNG--GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNV 127

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +L+      L D G+    LG   P        GTPNY+APE  + E  G   F  D W 
Sbjct: 128 LLDADGHIKLTDYGMCKEGLG---PGDTTSTFCGTPNYIAPEILRGEEYG---FSVDWWA 181

Query: 239 FACSIIEMLTGVQP 252
               + EM+ G  P
Sbjct: 182 LGVLMFEMMAGRSP 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 27/276 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           IK   + L+  +G G FG+V+LA  Y    + D+   VAVK L     D  R    R  +
Sbjct: 2   IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKIL-VAVKTLKDA-SDNARKDFHREAE 59

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIM---------KFYEGSVGDRMAQLKGG---KLS 145
           L    Q  E I    G+ V    + ++          KF      D +   +G    +L+
Sbjct: 60  LLTNLQH-EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELT 118

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
            S +   A  +A G++ L S+  +  +L   N ++ E     +GD G+        + S+
Sbjct: 119 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-----DVYST 173

Query: 206 DLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
           D  R  G  + M P +W P    +    + E+D W     + E+ T G QP    S +E+
Sbjct: 174 DYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 231

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
            + + + + +   P   P  V +++LGC++ +   R
Sbjct: 232 IECITQGRVLQR-PRTCPKEVYDLMLGCWQREPHMR 266

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 64/289 (22%), Positives = 111/289 (38%), Gaps = 63/289 (21%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ----- 103
           IG G +G+V+ A H  + +       VA+KI+  ++++   +  E  N L          
Sbjct: 14  IGEGTYGKVYKARHKKTGQ------LVAIKIMDIIEDEEEEIKEE-YNILRKYSNHPNIA 66

Query: 104 GVEGICWLQGISVINGKICIIMKFYE-GSVGD--RMAQLKGGKLSLSNVFRYAI-DLAQG 159
              G    +     + ++ ++M+    GSV D  +  + KG +L       Y + +  +G
Sbjct: 67  TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLK-EEWIAYILRETLRG 125

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNY 216
           +  LH   ++  ++K  N +L +     L D G+   L       S L RR   +GTP +
Sbjct: 126 LAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL------DSTLGRRNTFIGTPYW 179

Query: 217 MAPE----QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           MAPE      QP+        +D W    + IE+  G  P C               ++ 
Sbjct: 180 MAPEVIACDEQPDAS--YDARSDVWSLGITAIELADGKPPLC---------------DMH 222

Query: 273 P------IPSGLPPAV----------ENVLLGCFEYDLRSRPLMTDILR 305
           P      IP   PP +           + +  C   +   RP M ++L 
Sbjct: 223 PMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 21/113 (18%)

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR------LGTPNY 216
           LH++GI+  +LKP N +L+      L D G           +  L          GTP Y
Sbjct: 109 LHNRGIIYRDLKPENLLLDSNGYVKLVDFGF----------AKKLKSGQKTWTFCGTPEY 158

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVR 267
           +APE      +G   F  D W     + E+LTG  P      D  EIY+ +++
Sbjct: 159 VAPEIILN--KG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK 208

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 52/237 (21%)

Query: 47  HRIGRGPFGEVW----LATH-------YLSTEDCDEYHEVA---VKILHPVKEDRMRVLL 92
             +G G +G V      AT        +  +ED ++  + A   VK+L  ++ +     +
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN----I 62

Query: 93  ERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRY 152
             L + F +                 G++ ++ ++ E ++ + +    GG L    V  Y
Sbjct: 63  VNLKEAFRR----------------KGRLYLVFEYVERTLLELLEASPGG-LPPDAVRSY 105

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
              L Q I   HS  I+  ++KP N +++E+    L D G    L     P+S L   + 
Sbjct: 106 IWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA--RPASPLTDYVA 163

Query: 213 TPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIY 262
           T  Y APE       +   V        D W   C + E+L G     G S +D++Y
Sbjct: 164 TRWYRAPELLVGDTNYGKPV--------DVWAIGCIMAELLDGEPLFPGDSDIDQLY 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 49.0 bits (116), Expect = 3e-06
 Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 29/288 (10%)

Query: 22  DHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH 81
           + LRT V+  +    + +        +IG+G  G V+ A       D     EVA+K ++
Sbjct: 6   EKLRTIVSIGDPKKKYTR------YEKIGQGASGTVFTAI------DVATGQEVAIKQIN 53

Query: 82  PVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLK 140
             K+ +  +++  +  L +K      I       ++  ++ ++M++  G S+ D + +  
Sbjct: 54  LQKQPKKELIINEI--LVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC 111

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
             +  ++ V R  +   Q +  LH+  ++  ++K  N +L       L D G       I
Sbjct: 112 MDEAQIAAVCRECL---QALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFG---FCAQI 165

Query: 201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VD 259
               S     +GTP +MAPE    +  GP   + D W      IEM+ G  P    + + 
Sbjct: 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMVEGEPPYLNENPLR 222

Query: 260 EIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            +Y  ++     P +  P  L P   + L  C E D+  R    ++L+
Sbjct: 223 ALY--LIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G +G V+ A H  + +       VA+K++ PV+ED     + +   +  +C     I
Sbjct: 11  LGEGSYGSVYKAIHKETGQ------VVAIKVV-PVEEDLQE--IIKEISILKQCDS-PYI 60

Query: 109 CWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLH 164
               G    N  + I+M++   GSV D M ++    L+   ++ +    +   +G+  LH
Sbjct: 61  VKYYGSYFKNTDLWIVMEYCGAGSVSDIM-KITNKTLTEEEIAAILYQTL---KGLEYLH 116

Query: 165 SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQP 224
           S   +  ++K  N +LNE  +A L D G+   L       + +   +GTP +MA     P
Sbjct: 117 SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV---IGTPFWMA-----P 168

Query: 225 EVRGPISFE--TDSWGFACSIIEMLTGVQPR 253
           EV   I +    D W    + IEM  G  P 
Sbjct: 169 EVIQEIGYNNKADIWSLGITAIEMAEGKPPY 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 41/241 (17%)

Query: 26  TAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE 85
           ++ A+ +  +A    S L+  +RIG G  G V+   H  +          A+K+++   E
Sbjct: 59  SSSASGSAPSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGR------LYALKVIYGNHE 112

Query: 86  DRMRVLLER----LNDL----FLKCQGVEGICWLQGISVINGKICIIMKFYEGSV--GDR 135
           D +R  + R    L D+     +KC  +            NG+I ++++F +G    G  
Sbjct: 113 DTVRRQICREIEILRDVNHPNVVKCHDMFDH---------NGEIQVLLEFMDGGSLEGTH 163

Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH 195
           +A     +  L++V R  +    GI  LH + I+  ++KP N ++N A    + D G+  
Sbjct: 164 IAD----EQFLADVARQILS---GIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSR 216

Query: 196 LLLGI--PLPSSDLPRRLGTPNYMAPEQWQPEVRGPI--SFETDSWGFACSIIEMLTGVQ 251
           +L     P  SS     +GT  YM+PE+   ++       +  D W    SI+E   G  
Sbjct: 217 ILAQTMDPCNSS-----VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF 271

Query: 252 P 252
           P
Sbjct: 272 P 272

Length = 353

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 48.0 bits (114), Expect = 5e-06
 Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 31/282 (10%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS +  +  IG G FGEV+     +      +   VA+K L P   ++ R       D
Sbjct: 2   IHPSHITKQKVIGAGEFGEVFRGILKMPGR---KEVAVAIKTLKPGYTEKQR------QD 52

Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            FL    + G      I  L+G+        II ++ E    D+  +   G+ S   +  
Sbjct: 53  -FLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVG 111

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-----LPSSD 206
               +A G+  L     +  +L   N ++N      + D G+  +L   P          
Sbjct: 112 MLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGK 171

Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
           +P R   P  +A  ++        +  +D W F   + E+++ G +P    S  E+  A+
Sbjct: 172 IPIRWTAPEAIAYRKF--------TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI 223

Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
                +P  P   P AV  ++L C++ D   RP   DI+ + 
Sbjct: 224 NDGFRLPA-PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 48.0 bits (114), Expect = 6e-06
 Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 30/214 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV+           D     A+K L      +K+     L ER+    +    
Sbjct: 2   IGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 55

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQL 163
              I  +        K+  I+    G  GD    L + G  S + +  YA ++  G+  +
Sbjct: 56  CPFIVCMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEAEMRFYAAEIILGLEHM 113

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-----LGTPNYMA 218
           H++ ++  +LKP N +L+E     + D+G+          + D  ++     +GT  YMA
Sbjct: 114 HNRFVVYRDLKPANILLDEHGHVRISDLGL----------ACDFSKKKPHASVGTHGYMA 163

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           PE  Q  V    S   D +   C + ++L G  P
Sbjct: 164 PEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.8 bits (113), Expect = 6e-06
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 16/146 (10%)

Query: 117 INGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKP 175
           ++ ++ ++M+F   GSV D +   KG  L    +     ++ +G+  LH   ++  ++K 
Sbjct: 80  MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG 139

Query: 176 FNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPE----QWQPEVRG 228
            N +L E     L D G+   L         + RR   +GTP +MAPE       P+   
Sbjct: 140 QNVLLTENAEVKLVDFGVSAQL------DRTVGRRNTFIGTPYWMAPEVIACDENPD--A 191

Query: 229 PISFETDSWGFACSIIEMLTGVQPRC 254
              F++D W    + IEM  G  P C
Sbjct: 192 TYDFKSDLWSLGITAIEMAEGAPPLC 217

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 47.7 bits (113), Expect = 7e-06
 Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 19/213 (8%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
            +L  RIG G +G+V+ A +     +  E   + V  L P  ED   V  E +  +   C
Sbjct: 11  FELIQRIGSGTYGDVYKARNV----NTGELAAIKVIKLEP-GEDFAVVQQEII--MMKDC 63

Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
           +    + +  G  +   K+ I M+F  G     +  + G  LS S +   + +  QG+  
Sbjct: 64  KHSNIVAYF-GSYLRRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYY 121

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAP 219
           LHSKG +  ++K  N +L +     L D G+   +      ++ + +R   +GTP +MAP
Sbjct: 122 LHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI------TATIAKRKSFIGTPYWMAP 175

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           E    E +G  +   D W    + IE L  +QP
Sbjct: 176 EVAAVERKGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 47.8 bits (114), Expect = 7e-06
 Identities = 62/282 (21%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 41  SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           SA++    +G G FG+V+         +      VA+K L    E +++    +  +L  
Sbjct: 5   SAVRFLEELGEGAFGKVYKG-ELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMS 63

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE--------------GSVGDRMAQLKGGK-LS 145
             Q    +C L G+       C++ ++                  VG           L 
Sbjct: 64  DLQHPNIVCLL-GVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
            S+    AI +A G+  L S   +  +L   N ++ E     + D G+   +      S+
Sbjct: 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIY-----SA 177

Query: 206 DLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
           D  R       + P +W P    + G  + E+D W F   + E+ + G+QP  G S  E+
Sbjct: 178 DYYRVQS--KSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +  RQ + P P   P  V  +++ C+      RP   DI
Sbjct: 236 IEMIRSRQ-LLPCPEDCPARVYALMIECWNEIPARRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDL 207
           +++Y + L   +  +HSK I+  ++KP N  +  A   V LGD+G     LG    S   
Sbjct: 108 IWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT-ATGVVKLGDLG-----LGRFFSSKTT 161

Query: 208 P--RRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 264
                +GTP YM+PE+    +     +F++D W   C + EM     P  G  ++ +Y  
Sbjct: 162 AAHSLVGTPYYMSPER----IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSL 216

Query: 265 V--VRRQEIPPIPSGLPPA-VENVLLGCFEYDLRSRPLMTDILRVFK 308
              + + + PP+P+      + +++  C   D   RP ++ +L+V K
Sbjct: 217 CKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 48.1 bits (114), Expect = 8e-06
 Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 16/187 (8%)

Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
           +G+I I M+  +G   D++ + K G++    + + +I + +G+  L  K  I+  ++KP 
Sbjct: 75  DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 133

Query: 177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
           N ++N      L D G+   L+      S     +GT +YM+PE+ Q       S ++D 
Sbjct: 134 NILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQGT---HYSVQSDI 185

Query: 237 WGFACSIIEMLTG---VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 293
           W    S++EM  G   + P   + ++ ++   V      P  S   P           Y 
Sbjct: 186 WSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGD---PAESETSPRPRPPGRPLSSYG 242

Query: 294 LRSRPLM 300
             SRP M
Sbjct: 243 PDSRPPM 249

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 24/265 (9%)

Query: 37  WIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W   S  LKL   IG+G FG+V L  +           +VAVK L          L E  
Sbjct: 1   WAINSKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDSTAAQAFLAE-- 50

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI 154
             +    +    +  L G+ +    + I+ ++   GS+ D +       ++L+    +A+
Sbjct: 51  ASVMTTLRHPNLVQ-LLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFAL 109

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
           D+ +G+  L  K  +  +L   N +++E   A + D G+          S  LP +    
Sbjct: 110 DVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAK-EASQGQDSGKLPVK---- 164

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP 273
            + APE  +       S ++D W F   + E+ + G  P     + ++   V +   +  
Sbjct: 165 -WTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEA 220

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRP 298
            P G PP V  V+  C+E D   RP
Sbjct: 221 -PEGCPPEVYKVMKDCWELDPAKRP 244

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 8e-06
 Identities = 65/280 (23%), Positives = 99/280 (35%), Gaps = 84/280 (30%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR------VLLER------- 94
            IGRG FGEVWL          D     A+K+L   K D ++      V  ER       
Sbjct: 8   VIGRGAFGEVWLVRDK------DTGQVYAMKVLR--KSDMIKRNQIAHVRAERDILADAD 59

Query: 95  ---LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
              +  L+   Q  E              + ++M++  G  GD M       L   +VF 
Sbjct: 60  SPWIVKLYYSFQDEE-------------HLYLVMEYMPG--GDLM-----NLLIRKDVFP 99

Query: 152 ------YAIDLAQGILQLHSKGILVLNLKPFNFILNE------------------ADRAV 187
                 Y  +L   +  +H  G +  ++KP N +++                    DR  
Sbjct: 100 EETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159

Query: 188 LGDVGIPHLLLGIPLPSSDLPRRL--------GTPNYMAPEQWQPEVRG-PISFETDSWG 238
             +     L     L      ++         GTP+Y+APE     +RG P   E D W 
Sbjct: 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV----LRGTPYGLECDWWS 215

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIP 275
               + EML G  P    ++ E Y+ ++  +E    PP P
Sbjct: 216 LGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDP 255

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 47.5 bits (113), Expect = 8e-06
 Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 39/279 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           ++ + + ++H++G G +GEV+                VAVK L   KED M V      +
Sbjct: 3   MERTDITMKHKLGGGQYGEVYEG--VWKKYSL----TVAVKTL---KEDTMEV------E 47

Query: 98  LFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
            FLK   V        +  L G+        II +F   G++ D + +    +++   + 
Sbjct: 48  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 107

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG---IPLPSSDL 207
             A  ++  +  L  K  +  +L   N ++ E     + D G+  L+ G        +  
Sbjct: 108 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 167

Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
           P +   P  +A  ++        S ++D W F   + E+ T G+ P  G  + ++Y+ + 
Sbjct: 168 PIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 219

Query: 267 R--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           +  R E P    G PP V  ++  C++++   RP   +I
Sbjct: 220 KGYRMERPE---GCPPKVYELMRACWQWNPSDRPSFAEI 255

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 47.4 bits (113), Expect = 9e-06
 Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 41/293 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERL 95
           +   ++ L   +G G FGEV+   +     D  E  +VAVK L     ++D    L+E L
Sbjct: 3   VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVEL-QVAVKTLPESCSEQDESDFLMEAL 61

Query: 96  -----NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
                N         + I  L G+S       I+++   G  GD  + L+  +       
Sbjct: 62  IMSKFNH--------QNIVRLIGVSFERLPRFILLELMAG--GDLKSFLRENRPRPERPS 111

Query: 144 -LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAV-LGDVGIPHLLLG 199
            L++ ++   A D+A+G   L     +  ++   N +L      R   + D G+   +  
Sbjct: 112 SLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYR 171

Query: 200 IPLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
                +   R+ G    M P +W P    + G  + +TD W F   + E+ + G  P  G
Sbjct: 172 -----ASYYRKGGRA--MLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPG 224

Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           R+  E+ + V     + P P G P  V  ++  C+++    RP    IL   +
Sbjct: 225 RTNQEVMEFVTGGGRLDP-PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 47.7 bits (113), Expect = 9e-06
 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 13/205 (6%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG + +V L    +  +  +  + + V     V +D     ++    +F +      +
Sbjct: 3   IGRGSYAKVLL----VRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 58

Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L        ++  ++++  G  GD M  + +  KL   +   Y+ +++  +  LH +G
Sbjct: 59  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 116

Query: 168 ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVR 227
           I+  +LK  N +L+      L D G+    L    P        GTPNY+APE  + E  
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL---RPGDTTSTFCGTPNYIAPEILRGEDY 173

Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
           G   F  D W     + EM+ G  P
Sbjct: 174 G---FSVDWWALGVLMFEMMAGRSP 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 47.4 bits (112), Expect = 9e-06
 Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 17/206 (8%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLKCQGVE 106
           RIG+G FGEV+         D      VA+KI+     ED +  + + +  +  +C    
Sbjct: 11  RIGKGSFGEVFKGI------DNRTQQVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDS-P 62

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            +    G  +   K+ IIM++  G  G  +  L+ G      +     ++ +G+  LHS+
Sbjct: 63  YVTKYYGSYLKGTKLWIIMEYLGG--GSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE 120

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
             +  ++K  N +L+E     L D G+   L    +  +     +GTP +MAPE  Q   
Sbjct: 121 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIQ--- 174

Query: 227 RGPISFETDSWGFACSIIEMLTGVQP 252
           +     + D W    + IE+  G  P
Sbjct: 175 QSAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.2 bits (113), Expect = 1e-05
 Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 57/239 (23%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---------RVLLERLNDLF 99
           +G G FG V L  H   +         A+KIL   K  ++         + +L+ +   F
Sbjct: 9   LGTGSFGRVMLVRH-KGSGKY-----YALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF 62

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
                   +  L G    +  + ++M++  G  G+  + L K G+        YA   AQ
Sbjct: 63  --------LVNLYGSFQDDSNLYLVMEYVPG--GELFSHLRKSGRFPEPVARFYA---AQ 109

Query: 159 GILQ---LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL---- 211
            +L    LHS  I+  +LKP N +L+      + D G                +R+    
Sbjct: 110 VVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFG--------------FAKRVKGRT 155

Query: 212 ----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
               GTP Y+APE              D W     I EML G  P    +  +IY+ ++
Sbjct: 156 YTLCGTPEYLAPEIIL---SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL 211

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 34/274 (12%)

Query: 49  IGRGPFGEVWLATHYLSTEDC-DEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +GRG FGEV+LA       +       V VK L   K++ ++    R  D+F K    + 
Sbjct: 13  LGRGEFGEVFLA--KAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH-KN 69

Query: 108 ICWLQGISVINGKICIIMKFYEGSVGD----------RMAQLKGGKLSLSNVFRYAIDLA 157
           +  L G+        +I+++ +  +GD          +  +LK   LS          +A
Sbjct: 70  VVRLLGLCREAEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIA 127

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI------PLPSSDLPRRL 211
            G+  L +   +  +L   N +++ + R V   V +  L   +       L ++ +P R 
Sbjct: 128 LGMDHLSNARFVHRDLAARNCLVS-SQREV--KVSLLSLSKDVYNSEYYKLRNALIPLR- 183

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               ++APE  Q       S ++D W F   + E+ T G  P  G S +E+ + +   + 
Sbjct: 184 ----WLAPEAVQ---EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             P+P G P  +  ++  C+  + + RP  ++++
Sbjct: 237 ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELV 270

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 33/287 (11%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  S ++    +G   FG+V+   H   T   ++   VA+K L    E  +R   +    
Sbjct: 2   INLSTVRFMEELGEDRFGKVYKG-HLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAM 60

Query: 98  LFLKCQGVEGICWL------QGISVINGKIC-------IIMKFYEGSVG----DRMAQLK 140
           +  + Q    +C L      Q +S+I            ++M+     VG    D+  +  
Sbjct: 61  MRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK-- 118

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
              L  ++       +A G+  L S  ++  +L   N ++ +     + D+G     L  
Sbjct: 119 -STLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLG-----LFR 172

Query: 201 PLPSSDLPRRLGTPNYMAPEQW-QPE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
            + ++D  + +G  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG 
Sbjct: 173 EVYAADYYKLMG--NSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230

Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           S  ++ + ++R +++ P P   P  V  ++L C+      RP   DI
Sbjct: 231 SNQDVIE-MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 43/242 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP------------VKEDRMRVLLER-- 94
           +G+G FG+V LA      +  DE +  A+K+L              + E R+  L  +  
Sbjct: 3   LGKGSFGKVMLA----ELKGTDEVY--AIKVLKKDVILQDDDVDCTMTEKRILALAAKHP 56

Query: 95  -LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRY 152
            L  L    Q  +             ++  +M++  G  GD M Q+ +  K        Y
Sbjct: 57  FLTALHCCFQTKD-------------RLFFVMEYVNG--GDLMFQIQRSRKFDEPRSRFY 101

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
           A ++   ++ LH  G++  +LK  N +L+      L D G+     GI L         G
Sbjct: 102 AAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKE--GI-LNGVTTTTFCG 158

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           TP+Y+APE  Q    GP     D W     + EM+ G  P    + D+++++++    + 
Sbjct: 159 TPDYIAPEILQELEYGP---SVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY 215

Query: 273 PI 274
           P+
Sbjct: 216 PV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 34/267 (12%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLKCQGVE 106
           +IG+G FGEV+         D      VA+KI+     ED +  + + +  +  +C    
Sbjct: 11  KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEIT-VLSQCDS-P 62

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            +    G  + + K+ IIM++  G  G  +  L+ G L  + +     ++ +G+  LHS+
Sbjct: 63  YVTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSE 120

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
             +  ++K  N +L+E     L D G+   L    +  +     +GTP +MAPE  +   
Sbjct: 121 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK--- 174

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE--- 283
           +     + D W    + IE+  G  P       E++   V    +  IP   PP +E   
Sbjct: 175 QSAYDSKADIWSLGITAIELAKGEPPH-----SELHPMKV----LFLIPKNNPPTLEGNY 225

Query: 284 -----NVLLGCFEYDLRSRPLMTDILR 305
                  +  C   +   RP   ++L+
Sbjct: 226 SKPLKEFVEACLNKEPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 44/185 (23%), Positives = 69/185 (37%), Gaps = 16/185 (8%)

Query: 120 KICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           K+ +I+ +  G  G+    L +    + S V  Y  ++   +  LH  GI+  ++K  N 
Sbjct: 79  KLHLILDYVNG--GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENI 136

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPI---SFET 234
           +L+     VL D G+    L       +      GT  YMAPE     +RG         
Sbjct: 137 LLDSEGHVVLTDFGLSKEFLA---EEEERAYSFCGTIEYMAPEV----IRGGSGGHDKAV 189

Query: 235 DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QEIPPIPSGLPPAVENVLLGCFEY 292
           D W       E+LTG  P            + RR  +  PP P  +     + +    E 
Sbjct: 190 DWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEK 249

Query: 293 DLRSR 297
           D + R
Sbjct: 250 DPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 46.9 bits (111), Expect = 3e-05
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 24/196 (12%)

Query: 120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR--------YAIDLAQGILQLHSKGILVL 171
           K+ +IM++  GS GD   Q+K  +L     F+        Y I LA  + ++HS+ ++  
Sbjct: 139 KLLLIMEY--GSGGDLNKQIKQ-RLKEHLPFQEYEVGLLFYQIVLA--LDEVHSRKMMHR 193

Query: 172 NLKPFNFILNEADRAVLGDVGIPHLL---LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG 228
           +LK  N  L       LGD G        + + + SS      GTP Y+APE W+   R 
Sbjct: 194 DLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS----FCGTPYYLAPELWE---RK 246

Query: 229 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 288
             S + D W     + E+LT  +P  G S  EI   V+   +  P P  +   ++ +L  
Sbjct: 247 RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL-YGKYDPFPCPVSSGMKALLDP 305

Query: 289 CFEYDLRSRPLMTDIL 304
               +   RP    +L
Sbjct: 306 LLSKNPALRPTTQQLL 321

Length = 478

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 51/224 (22%), Positives = 81/224 (36%), Gaps = 53/224 (23%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           RIG G  G V+ A    + E       VA+K          +V L RL          E 
Sbjct: 7   RIGEGAHGIVFKAKDRETGE------TVALK----------KVALRRLEGGIPNQALRE- 49

Query: 108 ICWLQGISVIN-----------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
           I  LQ                     ++M++    + + +   +   L  + V  Y   L
Sbjct: 50  IKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEER-PLPEAQVKSYMRML 108

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR----RLG 212
            +G+  +H+ GI+  +LKP N +++      + D G+  L       S + PR    ++ 
Sbjct: 109 LKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLF------SEEEPRLYSHQVA 162

Query: 213 TPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGV 250
           T  Y APE      ++ P V        D W   C   E+L G 
Sbjct: 163 TRWYRAPELLYGARKYDPGV--------DLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 67/279 (24%), Positives = 96/279 (34%), Gaps = 70/279 (25%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL------------HPVKEDRMRVLLERLN 96
           IGRG FGEV L     +       H  A+K L            H V+ +R  +L E  N
Sbjct: 9   IGRGAFGEVRLVQKKDTG------HIYAMKKLRKSEMLEKEQVAH-VRAER-DILAEADN 60

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
              +K          Q        + +IM++  G  GD M  L K    +      Y  +
Sbjct: 61  PWVVKLY-----YSFQD----ENYLYLIMEYLPG--GDMMTLLMKKDTFTEEETRFYIAE 109

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI----------------PHLLLG 199
               I  +H  G +  ++KP N +L+      L D G+                 H L  
Sbjct: 110 TILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPS 169

Query: 200 IPLPSSDLP-------------RR------LGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
             L     P             RR      +GTP+Y+APE +          E D W   
Sbjct: 170 NFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNK---ECDWWSLG 226

Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
             + EML G  P C  +  E Y  ++  +E    P  +P
Sbjct: 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVP 265

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 19/147 (12%)

Query: 116 VINGKICIIMKFYE-GSVGDRMAQL--KGG--KLSLSNVFRYAIDLAQGILQLHSKGILV 170
           V+  ++ ++M +   GS+ D M     +GG  +  ++ V +   ++ +G+  LHS G + 
Sbjct: 69  VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLK---EVLKGLEYLHSNGQIH 125

Query: 171 LNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-----LGTPNYMAPEQWQPE 225
            ++K  N +L E     + D G+   L        D  R+     +GTP +MAPE  + +
Sbjct: 126 RDIKAGNILLGEDGSVKIADFGVSASLA----DGGDRTRKVRKTFVGTPCWMAPEVME-Q 180

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP 252
           V G   F+ D W F  + IE+ TG  P
Sbjct: 181 VHG-YDFKADIWSFGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 46.0 bits (109), Expect = 4e-05
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQ 221
           +HSK ++  ++K  N +L       LGD G   +       S D+ R   GTP Y+APE 
Sbjct: 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATV--SDDVGRTFCGTPYYVAPEI 216

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
           W+   R P S + D +     + E+LT  +P  G +++E+    +  +   P+P  + P 
Sbjct: 217 WR---RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-YDPLPPSISPE 272

Query: 282 VENVLLGCFEYDLRSRP-----LMTDILRVFKS 309
           ++ ++      D + RP     L   I ++F S
Sbjct: 273 MQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305

Length = 496

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 16/143 (11%)

Query: 120 KICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           ++ ++M+F   GSV D +   KG  L    +     ++ +G+  LH+  ++  ++K  N 
Sbjct: 93  QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNV 152

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPE----QWQPEVRGPIS 231
           +L E     L D G+   L         + RR   +GTP +MAPE       P+      
Sbjct: 153 LLTENAEVKLVDFGVSAQL------DRTVGRRNTFIGTPYWMAPEVIACDENPD--ATYD 204

Query: 232 FETDSWGFACSIIEMLTGVQPRC 254
           + +D W    + IEM  G  P C
Sbjct: 205 YRSDIWSLGITAIEMAEGAPPLC 227

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 45.9 bits (109), Expect = 6e-05
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 24/124 (19%)

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN----------------EADRA 186
           K S+         +   I  +HSKG+L  +LKP N +L                 + +  
Sbjct: 109 KTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEE 168

Query: 187 VLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRG-PISFETDSWGFACSII 244
            L D+ +      I   S  +P ++ GTP+YMAPE+    + G P S  TD +     + 
Sbjct: 169 DLLDIDVD--ERNICYSSMTIPGKIVGTPDYMAPER----LLGVPASESTDIYALGVILY 222

Query: 245 EMLT 248
           +MLT
Sbjct: 223 QMLT 226

Length = 932

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 6e-05
 Identities = 60/249 (24%), Positives = 92/249 (36%), Gaps = 47/249 (18%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--------HPVKEDRMRVLLERLNDLF 99
           +IG G +G V+ A   L+     E   VA+K +         P    R   LL+ LN   
Sbjct: 6   KIGEGTYGVVYKARDKLT----GEI--VAIKKIKLRFESEGIPKTALREIKLLKELNH-- 57

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD--RMAQLKGGKLSLSNVFRYAIDLA 157
                   I  L  +    G + ++ +F +  +    +  Q     L  S +  Y   L 
Sbjct: 58  ------PNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRG---LPESLIKSYLYQLL 108

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
           QG+   HS GIL  +LKP N ++N      L D G+         P +     + T  Y 
Sbjct: 109 QGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH---YVVTRWYR 165

Query: 218 APE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQE 270
           APE       +   V        D W   C   E+L+      G+S +D+++   + R  
Sbjct: 166 APELLLGDKGYSTPV--------DIWSVGCIFAELLSRRPLFPGKSEIDQLFK--IFRTL 215

Query: 271 IPPIPSGLP 279
             P P   P
Sbjct: 216 GTPDPEVWP 224

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 45.6 bits (108), Expect = 7e-05
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 128 YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH---SKGILVLNLKPFNFILNEAD 184
           +E   G  ++++    LS     + AI +A+ +  LH   S  ++V NL P   I++  D
Sbjct: 762 HEYIEGKNLSEVLRN-LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD 820

Query: 185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 244
                    PHL L +P       +   +  Y+APE  +      I+ ++D +GF   +I
Sbjct: 821 E--------PHLRLSLPGLLCTDTKCFISSAYVAPETRE---TKDITEKSDIYGFGLILI 869

Query: 245 EMLTGVQP 252
           E+LTG  P
Sbjct: 870 ELLTGKSP 877

Length = 968

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 27/216 (12%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL--K 101
           +L  R+G G +G+V+ A +  + E        AVKI+     D   ++ +   ++F+  +
Sbjct: 12  ELIQRVGSGTYGDVYKARNLHTGE------LAAVKIIKLEPGDDFSLIQQ---EIFMVKE 62

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQG 159
           C+    + +  G  +   K+ I M++  G     +  + G   +L ++ V R  +   QG
Sbjct: 63  CKHCNIVAYF-GSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETL---QG 118

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNY 216
           +  LHSKG +  ++K  N +L +     L D G+   +      ++ + +R   +GTP +
Sbjct: 119 LAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI------TATIAKRKSFIGTPYW 172

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           MAPE    E  G  +   D W    + IE L  +QP
Sbjct: 173 MAPEVAAVEKNGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
           G  +S+ NV  +   L +G+   H + IL  +LKP N ++NE     L D G   L    
Sbjct: 97  GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFG---LARAK 153

Query: 201 PLPSSDLPRRLGTPNYMAPEQW--QPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
            +P+      + T  Y  P+      E   PI    D WG  C + EM TG     G +V
Sbjct: 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPI----DMWGVGCILYEMATGRPMFPGSTV 209

Query: 259 DEIYDAVVRRQEIP 272
            E    + R    P
Sbjct: 210 KEELHLIFRLLGTP 223

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.8 bits (106), Expect = 7e-05
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 14/159 (8%)

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKGILVLNLKPFN 177
           GK+ +I+++  G  G+    L+   + + +    Y  +++  +  LH +GI+  +LKP N
Sbjct: 73  GKLYLILEYLSG--GELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPEN 130

Query: 178 FILNEADRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 235
            +L+      L D G+    +  G    +       GT  YMAPE       G      D
Sbjct: 131 ILLDAQGHVKLTDFGLCKESIHEGTVTHTF-----CGTIEYMAPEILMRSGHGK---AVD 182

Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIPP 273
            W     + +MLTG  P    +  +  D +++ +  +PP
Sbjct: 183 WWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP 221

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 44.7 bits (106), Expect = 8e-05
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
           +G+I I M+  +G   D++ + K G++  + + + +I + +G+  L  K  I+  ++KP 
Sbjct: 71  DGEISICMEHMDGGSLDQVLK-KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPS 129

Query: 177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
           N ++N      L D G+   L+      S     +GT +YM+PE+ Q       + ++D 
Sbjct: 130 NILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQGT---HYTVQSDI 181

Query: 237 WGFACSIIEMLTGVQP 252
           W    S++EM  G  P
Sbjct: 182 WSLGLSLVEMAIGRYP 197

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 37/212 (17%)

Query: 47  HRIGRGPFGEVWLATHYLSTE---------DCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           H IG G FG V+ AT+  + E            + +E    I+  VK  +    L+  N 
Sbjct: 27  HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ---LKHPNT 83

Query: 98  LFLK-CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
           +  K C   E   WL            +M++  GS  D    L+  K  L  V   AI  
Sbjct: 84  IEYKGCYLKEHTAWL------------VMEYCLGSASD---LLEVHKKPLQEVEIAAITH 128

Query: 157 A--QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
              QG+  LHS  ++  ++K  N +L E  +  L D G          P++     +GTP
Sbjct: 129 GALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA----SKSSPANSF---VGTP 181

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
            +MAPE       G    + D W    + IE+
Sbjct: 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 42/292 (14%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH----PVKEDRMRVLLERLNDL 98
           LK    +G G FG+V L  +  + +   E   VAVK L            +  +  L  L
Sbjct: 6   LKKIRVLGEGHFGKVSLYCYDPANDGTGEM--VAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 99  FLK-CQGVEGICWLQGISVINGKIC-IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
           + +     +G C  QG     GK   +IM++    +G     L   KL+L+ +  +A  +
Sbjct: 64  YHENIVKYKGCCSEQG-----GKGLQLIMEYV--PLGSLRDYLPKHKLNLAQLLLFAQQI 116

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
            +G+  LHS+  +  +L   N +L + DR V +GD G     L   +P      R+   +
Sbjct: 117 CEGMAYLHSQHYIHRDLAARNVLL-DNDRLVKIGDFG-----LAKAVPEGHEYYRV-RED 169

Query: 216 YMAPEQW-QPEV--RGPISFETDSWGFACSIIEMLTG--------------VQPRCGR-S 257
             +P  W   E       S+ +D W F  ++ E+LT               + P+ G+ +
Sbjct: 170 GDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMT 229

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           V  + + + R   + P P   P  V  ++  C+E + + RP    ++ + K 
Sbjct: 230 VVRLIELLERGMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 50/286 (17%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL-- 95
           I+   + L   IG G FG+V+    Y+S E+  E   VAVK     K      + E+   
Sbjct: 3   IQREDITLGRCIGEGQFGDVYQGV-YMSPEN--EKIAVAVKT---CKNCTSPSVREKFLQ 56

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI 154
               ++      I  L G+   N  + I+M+    G +   +   K   L L+++  Y+ 
Sbjct: 57  EAYIMRQFDHPHIVKLIGVITEN-PVWIVMELAPLGELRSYLQVNKY-SLDLASLILYSY 114

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD-------- 206
            L+  +  L SK  +  ++   N +++  D   LGD G+   L        D        
Sbjct: 115 QLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL-------EDESYYKASK 167

Query: 207 --LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCG-RS 257
             LP +     +MAPE         I+F      +D W F   + E+L  GV+P  G ++
Sbjct: 168 GKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN 214

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            D I    +   E  P+P   PP + +++  C+ YD   RP  T++
Sbjct: 215 NDVI--GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 62/239 (25%), Positives = 93/239 (38%), Gaps = 27/239 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQGV 105
           IGRG FGEV        TE        A+KIL+    +K        E  N L      V
Sbjct: 9   IGRGAFGEV-AVVKMKHTERI-----YAMKILNKWEMLKRAETACFREERNVL------V 56

Query: 106 EGIC-WLQGISVI---NGKICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQG 159
            G C W+  +         + ++M +Y G  GD +  L     +L       Y  ++   
Sbjct: 57  NGDCQWITTLHYAFQDENYLYLVMDYYVG--GDLLTLLSKFEDRLPEDMARFYIAEMVLA 114

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           I  +H    +  ++KP N +L+      L D G    +       S +   +GTP+Y++P
Sbjct: 115 IHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVA--VGTPDYISP 172

Query: 220 E--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           E  Q   +  G    E D W     + EML G  P    S+ E Y  ++  +E    PS
Sbjct: 173 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS 231

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 23/137 (16%)

Query: 119 GKICIIMKFYEG----SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLK 174
             I I M++ EG    S+  ++ + +GG++    + + A  + +G+  LHS+ I+  ++K
Sbjct: 74  SSIGIAMEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIK 132

Query: 175 PFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-----GTPNYMAPEQWQPEVRGP 229
           P N +L    +  L D G+          S +L   L     GT  YMAPE+ Q     P
Sbjct: 133 PSNILLTRKGQVKLCDFGV----------SGELVNSLAGTFTGTSFYMAPERIQ---GKP 179

Query: 230 ISFETDSWGFACSIIEM 246
            S  +D W    +++E+
Sbjct: 180 YSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 211
           Y+ +++  +  LH +GI+  +LK  N +L+      L D G+    +    P        
Sbjct: 101 YSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---PGDTTSTFC 157

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           GTPNY+APE  + E  G   F  D W     + EM+ G  P
Sbjct: 158 GTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRSP 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
           G  +++ NV  +   L +G+   H + +L  +LKP N ++NE     L D G   L    
Sbjct: 98  GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAK 154

Query: 201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCGRSV 258
            +P+      + T  Y  P+     + G   + T  D WG  C   EM TG     G +V
Sbjct: 155 SIPTKTYSNEVVTLWYRPPDI----LLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV 210

Query: 259 DE 260
           +E
Sbjct: 211 EE 212

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 43.7 bits (103), Expect = 2e-04
 Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 22/211 (10%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK-ILHPVKEDRMRVLLERLNDLFLK 101
           ++ +  +G G  G V+ A H L+         +AVK I   +  +  + ++  L  L+ K
Sbjct: 3   IQYQEILGHGNGGTVYKAYHLLTRR------ILAVKVIPLDITVELQKQIMSELEILY-K 55

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
           C     I +     V N +I I  +F +G   D        K+    + R A+ + +G+ 
Sbjct: 56  CDSPYIIGFYGAFFVEN-RISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLT 109

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            L S  IL  ++KP N ++N   +  L D G+   L+     +S     +GT  YMAPE+
Sbjct: 110 YLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV-----NSIAKTYVGTNAYMAPER 164

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
              E  G  S   D W    S +E+  G  P
Sbjct: 165 ISGEQYGIHS---DVWSLGISFMELALGRFP 192

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 8/166 (4%)

Query: 123 IIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
           ++M +Y G  GD +  L     +L       Y  ++   I  +H    +  ++KP N ++
Sbjct: 78  LVMDYYVG--GDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 135

Query: 181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWG 238
           +      L D G    L+      S +   +GTP+Y++PE  Q   + +G    E D W 
Sbjct: 136 DMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEDGKGKYGPECDWWS 193

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN 284
               + EML G  P    S+ E Y  ++  +E    P+ +    E+
Sbjct: 194 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSED 239

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 36/260 (13%)

Query: 49  IGRGPFGEVWL----------ATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V L          A   L  E      EVA    H V E R   +L+     
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 55

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 56  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 105

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D G+     GI    + +    GTP Y+
Sbjct: 106 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE--GIS-DGATMKTFCGTPEYL 162

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++  +EI   P  
Sbjct: 163 APEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-MEEI-RFPRT 217

Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 218 LSPEAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-- 201
           L++ ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D G+   +   P  
Sbjct: 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 230

Query: 202 --LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
               S+ LP +     +MAPE    +V    + ++D W F   + E+ + G  P  G  +
Sbjct: 231 VRKGSARLPLK-----WMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQI 282

Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +E +   ++       P    P +  ++L C++ D + RP  + ++ + 
Sbjct: 283 NEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR- 210
           Y   +  G+  LH + I+  +LKP N +L+       G+V I  L L + L       + 
Sbjct: 102 YTAQIISGLEHLHQRRIIYRDLKPENVLLDND-----GNVRISDLGLAVELKDGQSKTKG 156

Query: 211 -LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             GTP +MAPE  Q E      F  D +    ++ EM+    P
Sbjct: 157 YAGTPGFMAPELLQGE---EYDFSVDYFALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 31/280 (11%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  S +K+   IG G FGEV      L      E   VA+K L     ++ R        
Sbjct: 1   IDVSCVKIEEVIGAGEFGEVCRGR--LKLPGKREIF-VAIKTLKSGYTEKQR-------R 50

Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            FL    + G      I  L+G+   +  + II +F E    D   +   G+ ++  +  
Sbjct: 51  DFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVG 110

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 211
               +A G+  L     +  +L   N ++N      + D G+   L      +SD P   
Sbjct: 111 MLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED---DTSD-PTYT 166

Query: 212 GTPNYMAPEQWQ-PEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA 264
            +     P +W  PE    I++      +D W +   + E+++ G +P    S  ++ +A
Sbjct: 167 SSLGGKIPIRWTAPEA---IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINA 223

Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + +   +PP P   P A+  ++L C++ D  +RP    I+
Sbjct: 224 IEQDYRLPP-PMDCPTALHQLMLDCWQKDRNARPKFGQIV 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 54/294 (18%)

Query: 43  LKLRHRIGRGPFGEVWLA-----THYL---STEDCDEYHEVAVKILHP-----VKEDRMR 89
           L+L+ ++G G FGEV L        +L   + E   +   VAVK+L        + D ++
Sbjct: 7   LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLK 66

Query: 90  --VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK--- 143
              ++ RL +          I  L G+ V +  +C+I ++ E G +   ++Q +      
Sbjct: 67  EIKIMSRLKN--------PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFT 118

Query: 144 -------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL 196
                  +S++N+   A+ +A G+  L S   +  +L   N ++       + D G+   
Sbjct: 119 HANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRN 178

Query: 197 LLGIPLPSSDLPRRLGTP----NYMAPEQWQPEVRGPISFETDSWGFACSIIEM--LTGV 250
           L      S D  R  G       +MA   W+  + G  +  +D W F  ++ EM  L   
Sbjct: 179 LY-----SGDYYRIQGRAVLPIRWMA---WESILLGKFTTASDVWAFGVTLWEMFTLCKE 230

Query: 251 QPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           QP    S +++ +          RQ         P  V  +++ C+  D++ RP
Sbjct: 231 QPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRP 284

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 12/137 (8%)

Query: 168 ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ---P 224
           I+  ++KP N ++N   +  L D G+   L+     +S     +G  +YMAPE+ +   P
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV-----ASLAKTNIGCQSYMAPERIKSGGP 178

Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY---DAVVRRQEIPPIPSGLPPA 281
                 + ++D W    SI+EM  G  P    +   I+    A+V   + P +PSG    
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIV-DGDPPTLPSGYSDD 237

Query: 282 VENVLLGCFEYDLRSRP 298
            ++ +  C       RP
Sbjct: 238 AQDFVAKCLNKIPNRRP 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.4 bits (99), Expect = 4e-04
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 201
           G L   NV  +   L +G+  +H + IL  +LKP N ++++     L D G+        
Sbjct: 98  GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR---AKS 154

Query: 202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGV 250
           +PS      + T  Y  P+     + G   + T  D WG  C  +EM+ GV
Sbjct: 155 VPSHTYSNEVVTLWYRPPDV----LLGSTEYSTCLDMWGVGCIFVEMIQGV 201

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 67/287 (23%), Positives = 109/287 (37%), Gaps = 42/287 (14%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS + +   IG G FGEV      L  +      +VA+K L     D+ R        
Sbjct: 1   IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKE---IDVAIKTLKAGSSDKQR-------L 50

Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            FL    + G      I  L+G+   +  + II ++ E    D+  +   GK ++  +  
Sbjct: 51  DFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVG 110

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 211
               +A G+  L     +  +L   N ++N      + D G              L RRL
Sbjct: 111 MLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFG--------------LSRRL 156

Query: 212 GTPN--YMA-----PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDE 260
                 Y       P +W  PE      F +  D W F   + E+++ G +P    S  +
Sbjct: 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD 216

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +  AV     +PP P   P A+  ++L C++ D   RP  + I+   
Sbjct: 217 VIKAVEDGYRLPP-PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 27/268 (10%)

Query: 43  LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHP-VKEDRMRVLLERLNDLFL 100
           L     +G G FG+V  AT Y LS  D     +VAVK+L P         L+  L  +  
Sbjct: 37  LSFGKTLGAGAFGKVVEATAYGLSKSDA--VMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 101 KCQGVEGICWLQGISVINGKICIIMKF--YEGSVGDRMAQLKGGK---LSLSNVFRYAID 155
                E I  L G   I G I +I ++  Y    GD +  L+  +   L+L ++  ++  
Sbjct: 95  LGNH-ENIVNLLGACTIGGPILVITEYCCY----GDLLNFLRRKRESFLTLEDLLSFSYQ 149

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG----IPLPSSDLPRRL 211
           +A+G+  L SK  +  +L   N +L       + D G+   ++     +   ++ LP + 
Sbjct: 150 VAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVK- 208

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               +MAPE          +FE+D W +   + E+ + G  P  G  VD  +  +++   
Sbjct: 209 ----WMAPESI---FNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY 261

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
               P   P  + +++  C++ D   RP
Sbjct: 262 RMAQPEHAPAEIYDIMKTCWDADPLKRP 289

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 5e-04
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 20/134 (14%)

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 199
              K + S +  Y   L +G+  LHS GIL  ++K  N ++N      L D G+      
Sbjct: 93  PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPY-- 150

Query: 200 IPLPSSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 253
               S+D   R+ T  Y  PE      ++ PEV        D W   C + E+  G    
Sbjct: 151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEV--------DMWSVGCILAELFLGKPIF 202

Query: 254 CGRS----VDEIYD 263
            G +    +++I++
Sbjct: 203 QGSTELEQLEKIFE 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.5 bits (97), Expect = 6e-04
 Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 39/271 (14%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLER 94
           LKL   IG+G FG+V L  +          ++VAVK    +K D           V+ + 
Sbjct: 8   LKLLQTIGKGEFGDVMLGDY--------RGNKVAVKC---IKNDATAQAFLAEASVMTQL 56

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
            +   ++  GV        I    G + I+ ++  +GS+ D +       L    + +++
Sbjct: 57  RHSNLVQLLGV--------IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
           +D+ + +  L +   +  +L   N +++E + A + D G+          +  LP +   
Sbjct: 109 LDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK--- 164

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 272
             + APE  + +     S ++D W F   + E+ + G  P     + ++   V +  ++ 
Sbjct: 165 --WTAPEALREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 219

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
             P G PP V +V+  C+  D  +RP    +
Sbjct: 220 A-PDGCPPVVYDVMKQCWHLDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.7 bits (98), Expect = 7e-04
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 15/127 (11%)

Query: 125 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 184
           +K Y  + G R      G L  + V  +   L +GI   H   +L  +LKP N ++N+  
Sbjct: 84  LKKYMDTHGVR------GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG 137

Query: 185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACS 242
              L D G+     GIP+  +     + T  Y AP+     + G  ++ T  D W   C 
Sbjct: 138 ELKLADFGLAR-AFGIPV--NTFSNEVVTLWYRAPDV----LLGSRTYSTSIDIWSVGCI 190

Query: 243 IIEMLTG 249
           + EM+TG
Sbjct: 191 MAEMITG 197

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 7e-04
 Identities = 60/278 (21%), Positives = 105/278 (37%), Gaps = 50/278 (17%)

Query: 49  IGRGPFGEVWLATH----------YLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERLN 96
           +G G FG+V+ A H           +  E  +E     V + IL   K   +  L E   
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY- 71

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAID 155
                                  K+ I+++F +G ++   M +L+ G L+   +      
Sbjct: 72  -------------------FYENKLWILIEFCDGGALDSIMLELERG-LTEPQIRYVCRQ 111

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LG 212
           + + +  LHS  ++  +LK  N +L       L D G+           S L +R   +G
Sbjct: 112 MLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK------STLQKRDTFIG 165

Query: 213 TPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
           TP +MAPE    E     P  ++ D W    ++IE+     P    +   +   +++ + 
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE- 224

Query: 271 IPPI---PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            PP    PS    +  + L  C   D   RP   ++L+
Sbjct: 225 -PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 41.5 bits (97), Expect = 8e-04
 Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 8/180 (4%)

Query: 73  HEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSV 132
             VA+K++    E+ +     R   L LK      I  L  I      +  + ++    +
Sbjct: 31  QLVALKVISMKTEEGVPFTAIREASL-LKGLKHANIVLLHDIIHTKETLTFVFEYMHTDL 89

Query: 133 GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 192
              M Q  GG L   NV  +   L +G+  +H + IL  +LKP N +++      L D G
Sbjct: 90  AQYMIQHPGG-LHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFG 148

Query: 193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
              L     +PS      + T  Y  P+          S   D WG  C  IEML G QP
Sbjct: 149 ---LARAKSIPSQTYSSEVVTLWYRPPDVLLGATD--YSSALDIWGAGCIFIEMLQG-QP 202

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.4 bits (97), Expect = 8e-04
 Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 25/284 (8%)

Query: 24  LRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV 83
           LRT V+  +    + +        +IG+G  G V+ A   ++T       EVA+K ++  
Sbjct: 8   LRTIVSVGDPKKKYTR------FEKIGQGASGTVYTAID-VATG-----QEVAIKQMNLQ 55

Query: 84  KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++ +  +++  +  L ++      I       ++  ++ ++M++  G S+ D + +    
Sbjct: 56  QQPKKELIINEI--LVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD 113

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
           +  ++ V R   +  Q +  LHS  ++  ++K  N +L       L D G       I  
Sbjct: 114 EGQIAAVCR---ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITP 167

Query: 203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEI 261
             S     +GTP +MAPE    +  GP   + D W      IEM+ G  P    + +  +
Sbjct: 168 EQSKRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           Y            P  L     + L  C E D+  R    ++L+
Sbjct: 225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 14/171 (8%)

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 204
           +L  + + A ++A G+  L++K  +  +L   N ++       +GD G+        +  
Sbjct: 117 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYE 171

Query: 205 SDLPRRLGTP----NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
           +D  R+ G       +MAPE  +  V    S   D W F   + E+ +   QP  G S +
Sbjct: 172 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSS---DMWSFGVVLWEITSLAEQPYQGLSNE 228

Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           ++   V+    +   P   P  V +++  C++++ + RP   +I+ + K D
Sbjct: 229 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 37/279 (13%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS L     +G G FG V L   +    D      VA+K++    E  M        D
Sbjct: 1   IDPSELTFLKELGSGQFGVVHLG-KWRGKID------VAIKMIR---EGAMS------ED 44

Query: 98  LFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
            F++   V        +  L G+      I I+ ++   G + + + + K GKL    + 
Sbjct: 45  DFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLL 103

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
               D+ + +  L S G +  +L   N ++ E +   + D G+   +L     SS     
Sbjct: 104 DMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ---- 159

Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            GT     P +W  PEV      S ++D W F   + E+ + G  P    S  E+ ++V 
Sbjct: 160 -GTK---FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS 215

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
               +   P   P  V  ++  C+      RP    +L 
Sbjct: 216 AGYRLYR-PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 36/281 (12%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLF 99
             L   +G+G FG V  A   L +ED   + +VAVK+L        D    L E      
Sbjct: 1   FTLGRMLGKGEFGSVREA--QLKSED-GSFQKVAVKMLKADIFSSSDIEEFLREAA---C 54

Query: 100 LKCQGVEGICWLQGISV---INGKICI---IMKFYEGSVGDRMAQLKGGK-------LSL 146
           +K      +  L G+S+     G++ I   I+ F +   GD    L   +       L L
Sbjct: 55  MKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKH--GDLHTFLLMSRIGEEPFTLPL 112

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             + R+ ID+A G+  L SK  +  +L   N +LNE     + D G     L   + S D
Sbjct: 113 QTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG-----LSKKIYSGD 167

Query: 207 LPRRLGTPNYMAPEQW---QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
             R+ G  + + P +W   +       +  +D W F  ++ E++T G  P  G    EIY
Sbjct: 168 YYRQ-GCASKL-PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY 225

Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           + +++   +   P      V  ++  C+  + + RP    +
Sbjct: 226 NYLIKGNRLKQ-PPDCLEDVYELMCQCWSPEPKCRPSFQHL 265

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 25/194 (12%)

Query: 121 ICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
           +C++M++ EG  GD    LK  G L +     Y  +    +  LH+ GI+  +LKP N +
Sbjct: 76  LCMVMEYVEG--GDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLL 133

Query: 180 LNEADRAVLGDVGIPHLLLGIPLPSSDL--------------PRRLGTPNYMAPEQWQPE 225
           +       L D G+    +G+   +++L               +  GTP Y+APE    +
Sbjct: 134 ITSMGHIKLTDFGLSK--IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ 191

Query: 226 VRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVE 283
             G P+    D W     + E L G  P  G + +E++  V+    E P     LP   +
Sbjct: 192 GYGKPV----DWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQ 247

Query: 284 NVLLGCFEYDLRSR 297
           +++      +   R
Sbjct: 248 DLISRLLRQNPLER 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
           K+ ++ +F    +   M       + L  +  Y   L QG+   HS  +L  +LKP N +
Sbjct: 73  KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLL 132

Query: 180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSW 237
           +N      L D G+     G+P+ +      + T  Y APE     + G   + T  D W
Sbjct: 133 INTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEI----LLGCKYYSTAVDIW 185

Query: 238 GFACSIIEMLT 248
              C   EM+T
Sbjct: 186 SLGCIFAEMVT 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 0.001
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 23/262 (8%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG+G  G V+ A       D     EVA+K ++  ++ +  +++  +  L ++      
Sbjct: 26  KIGQGASGTVYTAI------DIATGQEVAIKQMNLQQQPKKELIINEI--LVMRENKNPN 77

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I       ++  ++ ++M++  G S+ D + +    +  ++ V R  +   Q +  LHS 
Sbjct: 78  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSN 134

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++K  N +L       L D G       I    S     +GTP +MAPE    + 
Sbjct: 135 QVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVE 283
            GP   + D W      IEM+ G  P    + +  +Y  ++     P +  P  L     
Sbjct: 192 YGP---KVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIATNGTPELQNPERLSAVFR 246

Query: 284 NVLLGCFEYDLRSRPLMTDILR 305
           + L  C E D+  R    ++L+
Sbjct: 247 DFLNRCLEMDVDRRGSAKELLQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.9 bits (95), Expect = 0.001
 Identities = 55/262 (20%), Positives = 109/262 (41%), Gaps = 23/262 (8%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG+G  G V+ A       D     EVA++ ++  ++ +  +++  +  L ++      
Sbjct: 27  KIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNPN 78

Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I       ++  ++ ++M++  G S+ D + +    +  ++ V R  +   Q +  LHS 
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN 135

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++K  N +L       L D G       I    S     +GTP +MAPE    + 
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVE 283
            GP   + D W      IEM+ G  P    + +  +Y  ++     P +  P  L     
Sbjct: 193 YGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFR 247

Query: 284 NVLLGCFEYDLRSRPLMTDILR 305
           + L  C + D+  R    ++L+
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 58/287 (20%), Positives = 105/287 (36%), Gaps = 39/287 (13%)

Query: 49  IGRGPFGEVWLATH--YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
           IG+G FG V+ A     L  E    +  VAVK+L       M+   +R   L  +     
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEP---FTMVAVKMLKEEASADMQADFQREAALMAEFDH-P 68

Query: 107 GICWLQGISVINGKICIIMKFYE-------------------GSVGDRMAQLKGGKLSLS 147
            I  L G+  +   +C++ ++                             +     L LS
Sbjct: 69  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLS 128

Query: 148 NVFRYAI--DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
              +  I   +A G+  L  +  +  +L   N ++ E     + D G+   +      S+
Sbjct: 129 CTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY-----SA 183

Query: 206 DLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
           D  +   + N   P +W P         + E+D W +   + E+ + G+QP  G + +E+
Sbjct: 184 DYYK--ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
               VR   +   P   P  + N++  C+      RP    I R+ +
Sbjct: 242 I-YYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FG+V+ A      ++ +     A K++    E+ +   +  + ++   C     I
Sbjct: 20  LGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYMVEI-EILATCNH-PYI 71

Query: 109 CWLQGISVINGKICIIMKFYEGSVGDR-MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L G    +GK+ I+++F  G   D  M +L  G L+   +      + + +  LHS  
Sbjct: 72  VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVICRQMLEALQYLHSMK 130

Query: 168 ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQP 224
           I+  +LK  N +L       L D G+    +        L RR   +GTP +MAPE    
Sbjct: 131 IIHRDLKAGNVLLTLDGDIKLADFGVSAKNV------KTLQRRDSFIGTPYWMAPEVVMC 184

Query: 225 EVR--GPISFETDSWGFACSIIEM 246
           E     P  ++ D W    ++IEM
Sbjct: 185 ETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 31/282 (10%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  S +K+   IG G FGEV   +  L      E   VA+K L     ++ R       D
Sbjct: 1   IDASCIKIEKVIGAGEFGEV--CSGRLKLPGKREIP-VAIKTLKAGYTEKQR------RD 51

Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            FL    + G      I  L+G+   +  + I+ ++ E    D   +   G+ ++  +  
Sbjct: 52  -FLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVG 110

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS-----SD 206
               +A G+  L   G +  +L   N ++N      + D G+  +L   P  +       
Sbjct: 111 MLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 170

Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
           +P R   P  +A  ++        +  +D W +   + E+++ G +P    S  ++  A+
Sbjct: 171 IPIRWTAPEAIAYRKF--------TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI 222

Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
                +P  P   P A+  ++L C++ D   RP    I+ + 
Sbjct: 223 EEGYRLPA-PMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 20/224 (8%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV L  H  S +        A+K+L       + D      ER    F     
Sbjct: 51  IGRGAFGEVQLVRHKSSQK------VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 104

Query: 105 V-EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           V +  C  Q     +  + ++M++  G  GD +  +    +       Y  ++   +  +
Sbjct: 105 VVQLFCAFQD----DKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 158

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS G++  ++KP N +L++     L D G    +    +   D    +GTP+Y++PE  +
Sbjct: 159 HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTA--VGTPDYISPEVLK 216

Query: 224 PE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
            +   G    E D W     + EML G  P    S+   Y  ++
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 260

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 10/125 (8%)

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
           G  +S+ NV  +   + +G+   H + +L  +LKP N ++NE     L D G   L    
Sbjct: 98  GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAK 154

Query: 201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCGRSV 258
            +P+      + T  Y  P+     + G   + T  D WG  C   EM +G     G +V
Sbjct: 155 SVPTKTYSNEVVTLWYRPPDV----LLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210

Query: 259 -DEIY 262
            DE++
Sbjct: 211 EDELH 215

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKGILVLNLKPFNF 178
           ++C +M++  G  G+    L   ++   +  R Y  ++   +  LHS  I+  +LK  N 
Sbjct: 69  RLCFVMEYVNG--GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENL 126

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           +L++     + D G+     GI   ++ +    GTP Y+APE  +    G      D WG
Sbjct: 127 MLDKDGHIKITDFGLCKE--GIT-DAATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWG 180

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
               + EM+ G  P   +  +++++ ++   E    P  L    +++L G    D   R
Sbjct: 181 LGVVMYEMMCGRLPFYNQDHEKLFELIL--MEDIKFPRTLSADAKSLLSGLLIKDPNKR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 26/206 (12%)

Query: 111 LQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILV 170
           L G+ V +  I ++ ++ +    D     +   +SL      A  LA  +  L  K ++ 
Sbjct: 66  LYGVCVRDENI-MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVH 124

Query: 171 LNLKPFNFILNEADRAV-------LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
            N+   N ++              L D GIP  +L        +P       ++APE   
Sbjct: 125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP-------WIAPEC-- 175

Query: 224 PEVRGPISFET---DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
             +R   +  T   D W F  +++E+ + G +P    S  E  +   + Q   P+P    
Sbjct: 176 --IRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-ERFYQDQHRLPMPDC-- 230

Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR 305
             + N++  C+ YD   RP    ILR
Sbjct: 231 AELANLINQCWTYDPTKRPSFRAILR 256

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           G +  ++  YE    + MAQ             Y  +L   I  +H  G +  ++KP N 
Sbjct: 86  GDLLSLLNRYEDQFDEDMAQF------------YLAELVLAIHSVHQMGYVHRDIKPENV 133

Query: 179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQP---EVRGPISFETD 235
           +++      L D G    L    + +S LP  +GTP+Y+APE       + +G    E D
Sbjct: 134 LIDRTGHIKLADFGSAARLTANKMVNSKLP--VGTPDYIAPEVLTTMNGDGKGTYGVECD 191

Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
            W       EM+ G  P    +  + Y+ ++  Q     P 
Sbjct: 192 WWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE 232

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 49/293 (16%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W +    L L   +G G FG+V  A   +  ++ +E   VAVK+L   K+D      + 
Sbjct: 6   EWELPRDRLTLGKPLGEGAFGQVVKAE-AVGLDNPNETSTVAVKML---KDDATE---KD 58

Query: 95  LNDLF-----LKCQGV-EGICWLQGISVINGKICIIMKF------------------YEG 130
           L+DL      +K  G  + I  L G+    G + +++++                  Y  
Sbjct: 59  LSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYAS 118

Query: 131 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
               R        L+  ++  +A  +A+G+  L SK  +  +L   N ++ E     + D
Sbjct: 119 PDDPR---PPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIAD 175

Query: 191 VGIPHLLLGIPLPSSDLPRRLGT---P-NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
            G     L   +   D  R+      P  +MAPE     V    + ++D W F   + E+
Sbjct: 176 FG-----LARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV---YTHQSDVWSFGVLLWEI 227

Query: 247 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
            T G  P  G  V+E++  +     +   P      + +++  C+      RP
Sbjct: 228 FTLGGSPYPGIPVEELFKLLKEGYRMEK-PQNCTQELYHLMRDCWHEVPSQRP 279

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 16/142 (11%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 211
           Y+ ++   +  LH  GI+  ++K  N +L+     VL D G+    L     S +  R  
Sbjct: 110 YSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL-----SEEKERTY 164

Query: 212 ---GTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
              GT  YMAPE     +RG        D W     I E+LTG  P            V 
Sbjct: 165 SFCGTIEYMAPEI----IRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS 220

Query: 267 RR--QEIPPIPSGLPPAVENVL 286
           RR  +  PP PS + P  +++L
Sbjct: 221 RRILKCDPPFPSFIGPEAQDLL 242

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 34/232 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDC-DEYHEVAVK--ILHPVKEDRMRVLLERLND--- 97
           KL + IG G FG V+ A        C D   +VA+K  +  P  ++R  ++++ LN    
Sbjct: 69  KLGNIIGNGSFGVVYEAI-------CIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINI 121

Query: 98  LFLKCQGVEGICWLQGISVINGKIC--IIMKFYEGSVGDRMAQLKGGKLSLSN--VFRYA 153
           +FLK        + +        I   ++M+F   +V   M        +L    V  Y+
Sbjct: 122 IFLK-----DYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYS 176

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLG 212
             L + +  +HSK I   +LKP N +++     + L D G    LL      S +  R  
Sbjct: 177 YQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRF- 235

Query: 213 TPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCGR-SVDEI 261
              Y APE     + G  ++ T  D W   C I EM+ G     G+ SVD++
Sbjct: 236 ---YRAPEL----MLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280

Length = 440

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 39.6 bits (92), Expect = 0.004
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 38/242 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG FGEV L  H  + +        A+K+L   +      +++R +  F         
Sbjct: 51  IGRGAFGEVQLVRHKSTRK------VYAMKLLSKFE------MIKRSDSAFF-------- 90

Query: 109 CWLQGISVINGKICIIMKFYEGSVGDR-----MAQLKGGKLS--LSN-------VFRYAI 154
            W +   +       +++ +     DR     M  + GG L   +SN          Y  
Sbjct: 91  -WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 149

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
           ++   +  +HS G +  ++KP N +L+++    L D G    +    +   D    +GTP
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTP 207

Query: 215 NYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           +Y++PE  + +   G    E D W     + EML G  P    S+   Y  ++  +    
Sbjct: 208 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 267

Query: 274 IP 275
            P
Sbjct: 268 FP 269

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 43/213 (20%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH------------PVKEDRMRVLLERLN 96
           IG G FG V+ A    ++E       VA+K +              +KE R    L   N
Sbjct: 23  IGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 97  DLFLK-CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYA 153
            +  + C   E   WL            +M++  GS  D +   K    ++ ++ V   A
Sbjct: 77  TIQYRGCYLREHTAWL------------VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA 124

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
           +   QG+  LHS  ++  ++K  N +L+E     LGD G   ++     P++     +GT
Sbjct: 125 L---QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXF---VGT 174

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
           P +MAPE       G    + D W    + IE+
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 39.1 bits (92), Expect = 0.004
 Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 45/222 (20%)

Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER---LNDL----- 98
            +IG G  GEV+ AT   + +      EVA+K +  +++    +++     + D      
Sbjct: 25  EKIGEGASGEVYKATDRATGK------EVAIKKMR-LRKQNKELIINEILIMKDCKHPNI 77

Query: 99  --FLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAID 155
             +     V    W+            +M++ + GS+ D + Q    +++   +     +
Sbjct: 78  VDYYDSYLVGDELWV------------VMEYMDGGSLTDIITQ-NFVRMNEPQIAYVCRE 124

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LG 212
           + QG+  LHS+ ++  ++K  N +L++     L D G    L      + +  +R   +G
Sbjct: 125 VLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL------TKEKSKRNSVVG 178

Query: 213 TPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPR 253
           TP +MAPE     ++      + D W      IEM  G  P 
Sbjct: 179 TPYWMAPEV----IKRKDYGPKVDIWSLGIMCIEMAEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.004
 Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 36/179 (20%)

Query: 121 ICIIMKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
           +C++M +  G  G+    L+   G  LS      YA ++   +  LH  GI+  +LKP N
Sbjct: 76  LCLVMDYCPG--GELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN 133

Query: 178 FILNEADRAVLGD------------VGIPHLLLGIPLPSSDLPRRL-------------- 211
            +L+E+   +L D                 L  G    S +                   
Sbjct: 134 ILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFV 193

Query: 212 GTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
           GT  Y+APE     + G       D W     + EML G  P  G + DE +  +++++
Sbjct: 194 GTEEYIAPEV----ISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKE 248

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	620
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	99.98
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.98
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.98
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.95
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.86
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.86
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.85
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.83
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.82
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.8
PRK12274	218	serine/threonine protein kinase; Provisional	99.78
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.77
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.76
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.73
PRK10345	210	hypothetical protein; Provisional	99.71
smart00090	237	RIO RIO-like kinase.	99.69
PRK14879	211	serine/threonine protein kinase; Provisional	99.67
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.67
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.6
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.59
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.59
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.58
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.57
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.5
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.46
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.36
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.35
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.31
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.21
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.14
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.12
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.11
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.05
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.02
KOG1243	690	consensus Protein kinase [General function predict	98.97
KOG3087	229	consensus Serine/threonine protein kinase [General	98.79
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.79
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.71
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.7
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.56
COG4248	637	Uncharacterized protein with protein kinase and he	98.49
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.43
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.33
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.27
PRK09902	216	hypothetical protein; Provisional	98.25
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.24
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.1
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.9
PF01636	239	APH: Phosphotransferase enzyme family This family	97.84
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.84
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.78
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.67
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.64
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.62
PLN02876	822	acyl-CoA dehydrogenase	97.52
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.51
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.38
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.38
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.23
PRK05231	319	homoserine kinase; Provisional	96.97
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.93
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.52
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.47
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.19
PRK10593	297	hypothetical protein; Provisional	96.04
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.0
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	95.98
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.98
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.92
KOG2270	520	consensus Serine/threonine protein kinase involved	95.92
KOG2268	465	consensus Serine/threonine protein kinase [Signal	95.06
PLN02236	344	choline kinase	94.72
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.58
PLN02756	418	S-methyl-5-thioribose kinase	94.37
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.02
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.96
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.44
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	93.41
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	92.84
PRK11768	325	serine/threonine protein kinase; Provisional	92.39
PRK06148	1013	hypothetical protein; Provisional	92.2
KOG1236	565	consensus Predicted unusual protein kinase [Genera	92.18
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.8
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.19
PTZ00384	383	choline kinase; Provisional	90.45
PRK12396	409	5-methylribose kinase; Reviewed	90.2
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.84
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	88.76
PHA03111	444	Ser/Thr kinase; Provisional	88.0
PF02237	48	BPL_C: Biotin protein ligase C terminal domain; In	87.04
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	85.55

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-51  Score=421.91  Aligned_cols=302  Identities=23%  Similarity=0.289  Sum_probs=251.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+.+++|++++.||+|+||+||+++.+.++      +.||+|++++...-..  ..-...+. .++...+||.||.++.
T Consensus        20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~------kiYAmKvl~K~~iv~~~e~~~~~~Er-~IL~~v~hPFiv~l~y   92 (357)
T KOG0598|consen   20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTG------KIYAMKVLKKKKIVEKKEVRHTKAER-NILSKIKHPFIVKLIY   92 (357)
T ss_pred             ccCChhheeeeeeeeccCCceEEEEEEcccC------ceeehhhhhhhHhhhhhhHHHHHHHH-HHHHhCCCCcEeeeEE
Confidence            3688999999999999999999999987554      5899999987653222  22222222 3556699999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      .|++.+++|+|+||+.| .|...+.  +++.+++..+..|+.+|+.||.|||++|||||||||+|||||.+|+++|+|||
T Consensus        93 sFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFg  170 (357)
T KOG0598|consen   93 SFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFG  170 (357)
T ss_pred             ecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccc
Confidence            99999999999999995 6666654  57899999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +|+.....   .....++|||+.|||||++.+.   +|+..+|+||||+++|||++|.+||.+.+..++++.|..+. .+
T Consensus       171 L~k~~~~~---~~~t~tfcGT~eYmAPEil~~~---gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~  243 (357)
T KOG0598|consen  171 LCKEDLKD---GDATRTFCGTPEYMAPEILLGK---GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LP  243 (357)
T ss_pred             cchhcccC---CCccccccCCccccChHHHhcC---CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CC
Confidence            99976442   3344568999999999999754   79999999999999999999999999999999999998765 24


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCC----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCccccc
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRP----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRS  347 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RP----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  347 (620)
                      ..|..++.+++++++++|..||++|.    ++.+|.+ .++...+|.......+.+|+.|.....   .++..++...+.
T Consensus       244 ~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~---~~~~~Fd~eft~  320 (357)
T KOG0598|consen  244 LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGL---EDTSNFDNEFTS  320 (357)
T ss_pred             CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCc---cccccccHHHHh
Confidence            45666999999999999999999996    5677766 788899999999999999998886554   555556665555


Q ss_pred             CCCCCCCCC
Q 007046          348 RKPPNSFKP  356 (620)
Q Consensus       348 ~~p~~~~~p  356 (620)
                      -.+..++..
T Consensus       321 ~~~~~~~~~  329 (357)
T KOG0598|consen  321 YTVDYSPVD  329 (357)
T ss_pred             ccccCCccc
Confidence            555555443

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.4e-47  Score=405.64  Aligned_cols=337  Identities=20%  Similarity=0.257  Sum_probs=255.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHH-HHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER-LNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~-~~~~~l~~~~h~nIv~l~g  113 (620)
                      ++.+..++|+++..||+|+||.||+|+.+.|++      .+|+|+|++.......+..+. .+..++...+.+.||+|+.
T Consensus       135 R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~------iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyY  208 (550)
T KOG0605|consen  135 RTRLSLDDFELLKVIGKGAFGEVRLARKKDTGE------IYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYY  208 (550)
T ss_pred             cccCCcccchhheeeccccceeEEEEEEccCCc------EEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEE
Confidence            457899999999999999999999999877775      899999988665443333222 2223555589999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      .|++.+++||||||++ |+...++.  +.+.|++..+.+|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||
T Consensus       209 sFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFG  286 (550)
T KOG0605|consen  209 SFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFG  286 (550)
T ss_pred             EecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeecccc
Confidence            9999999999999999 56666665  56899999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC----------------------CC-----CCC-----------------CCCcCCCCCCCCcccccCCCCC
Q 007046          193 IPHLLLGIP----------------------LP-----SSD-----------------LPRRLGTPNYMAPEQWQPEVRG  228 (620)
Q Consensus       193 la~~~~~~~----------------------~~-----~~~-----------------~~~~~GT~~YmAPE~~~~~~~~  228 (620)
                      ||.-+....                      ..     ...                 ....+|||.|||||++.+.   
T Consensus       287 Ls~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k---  363 (550)
T KOG0605|consen  287 LSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK---  363 (550)
T ss_pred             ccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC---
Confidence            996543200                      00     000                 1134799999999999865   


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHH
Q 007046          229 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDI  303 (620)
Q Consensus       229 ~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs---~~ei  303 (620)
                      .|+..+|+||||||+||||.|.+||.+.++.+++.+|........+|  ..+++++++||.+||. ||++|..   ++||
T Consensus       364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI  442 (550)
T KOG0605|consen  364 GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEI  442 (550)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence            68999999999999999999999999999999999998776554444  5678999999999999 9999984   7888


Q ss_pred             HH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCcccc---cCCCCCCCCCCC-CCCCCCccccccCCCCCCce
Q 007046          304 LR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVR---SRKPPNSFKPEN-MDVPEGRVVGVEHNTEGESF  378 (620)
Q Consensus       304 l~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~---~~~p~~~~~p~~-~~~~~~~~v~~~~~~~~~~~  378 (620)
                      .+ .+++..+|.....+.  +|+.|.....   .|...+++...   ..+.+....+.. +..+.+.. ....+..+-+|
T Consensus       443 K~HPfF~~v~W~~l~~~~--apfvP~v~~~---~DT~yFddF~e~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~Fvgf  516 (550)
T KOG0605|consen  443 KKHPFFKGVDWDHLREMP--APFVPQVNSE---LDTQYFDDFPEEDSMTPTADKSGPSRKMLSMVDTN-NSSKDINFVGF  516 (550)
T ss_pred             hcCCccccCCcchhhcCC--CCCCCCCCCc---ccccccccCcccccCcccccccccchhhhhccccc-CCcccccccce
Confidence            87 788899999887764  6777765543   23333332221   111111111111 11111111 11233457788


Q ss_pred             EEEeecCCCCC
Q 007046          379 VLVRVHGIHDP  389 (620)
Q Consensus       379 ~~~~~~~~~~~  389 (620)
                      ++.++...+..
T Consensus       517 Tyk~~~~~~~~  527 (550)
T KOG0605|consen  517 TYKNFDGLNKA  527 (550)
T ss_pred             eeecccccccc
Confidence            98888877543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.7e-47  Score=407.43  Aligned_cols=251  Identities=24%  Similarity=0.342  Sum_probs=218.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .+|...+.||+|||+.||++++..+++      .||+|++.+...  ...+.....+. .+.+.++|||||+++++|++.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge------~~A~KvVpk~~l~k~~~reKv~~EI-eIHr~L~HpnIV~f~~~FEDs   90 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGE------VVAVKVVPKKLLKKPKQREKVLNEI-EIHRSLKHPNIVQFYHFFEDS   90 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCc------EEEEEEeehHHhcCcchHHHHHHHH-HHHHhcCCCcEEeeeeEeecC
Confidence            569999999999999999999876665      799999987432  22233333332 367788999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +++|||.|+|. |+|..+++  +..+++|.+++.++.||+.||.|||+++|||||||..|++|+++.++||+|||||..+
T Consensus        91 ~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l  168 (592)
T KOG0575|consen   91 NNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL  168 (592)
T ss_pred             CceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeee
Confidence            99999999999 66666555  6689999999999999999999999999999999999999999999999999999988


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..   ......+.||||.|+|||++...   .+++.+||||+||++|.||+|++||...+..+++..|......  +|..
T Consensus       169 e~---~~Erk~TlCGTPNYIAPEVl~k~---gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~--~P~~  240 (592)
T KOG0575|consen  169 EY---DGERKKTLCGTPNYIAPEVLNKS---GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS--MPSH  240 (592)
T ss_pred             cC---cccccceecCCCcccChhHhccC---CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc--cccc
Confidence            54   23455678999999999999743   6899999999999999999999999999999999999876543  5779


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR-VFK  308 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~  308 (620)
                      ++.++++||.++|+.||.+||++++|+. .|+
T Consensus       241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  241 LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence            9999999999999999999999999998 444

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-47  Score=416.60  Aligned_cols=299  Identities=22%  Similarity=0.290  Sum_probs=254.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..+..++|++++.||+|.||+|++|..+.+++      .+|||++++...   +..+.. ..+..++....+||.++.++
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e------~yAIK~LKK~~Il~~d~Ve~~-~~EkrI~~la~~HPFL~~L~  435 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNE------YYAIKVLKKGDILQRDEVESL-MCEKRIFELANRHPFLVNLF  435 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCc------EEEEEEeeccceeccccHHHH-HHHHHHHHHhccCCeEeecc
Confidence            36888999999999999999999999988875      799999998642   222222 22333444444899999999


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ..|++.+++|+||||+.|+.  ++.....+.|++..+..|++.|+.||.|||++||||||||.+|||||.+|++||+|||
T Consensus       436 ~~fQT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFG  513 (694)
T KOG0694|consen  436 SCFQTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFG  513 (694)
T ss_pred             cccccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccc
Confidence            99999999999999999844  4433355899999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +|+....   .....+++||||.|||||++.+.   .|+.++|+|||||+|||||.|..||.+.+.+++++.|+..  .+
T Consensus       514 lcKe~m~---~g~~TsTfCGTpey~aPEil~e~---~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--~~  585 (694)
T KOG0694|consen  514 LCKEGMG---QGDRTSTFCGTPEFLAPEVLTEQ---SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--EV  585 (694)
T ss_pred             cccccCC---CCCccccccCChhhcChhhhccC---cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CC
Confidence            9997653   34466789999999999999755   7999999999999999999999999999999999999754  45


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCcccc
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVR  346 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  346 (620)
                      .+|..+|.++.++++++|.+||++|..+     .+|.. .|++.++|.....+...+|+.|.....   .|-..++...+
T Consensus       586 ~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~---~D~snFd~eFt  662 (694)
T KOG0694|consen  586 RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP---EDVSNFDEEFT  662 (694)
T ss_pred             CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCCh---hhhcccchhhh
Confidence            6899999999999999999999999965     56665 899999999999999999999986654   55566666666


Q ss_pred             cCCCCCCC
Q 007046          347 SRKPPNSF  354 (620)
Q Consensus       347 ~~~p~~~~  354 (620)
                      +.+|.-++
T Consensus       663 ~e~p~Lt~  670 (694)
T KOG0694|consen  663 SEKPALTP  670 (694)
T ss_pred             cCCCccCC
Confidence            66665554

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-47  Score=379.43  Aligned_cols=272  Identities=24%  Similarity=0.328  Sum_probs=238.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHH-HHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~-~~l~~~~h~nIv~l~g~~  115 (620)
                      ....++|+.++.||.|+||.|.+++++.++      ..+|+|++.+...-++++..+..++ .+++...||.++++.+.|
T Consensus        40 ~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g------~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~  113 (355)
T KOG0616|consen   40 PYSLQDFERLKTLGTGSFGRVHLVREKHSG------NYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF  113 (355)
T ss_pred             CcchhhhhheeeeccCccceEEEEEEccCC------ceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee
Confidence            388899999999999999999999988775      4799999987766555554444332 367778899999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .+.+.+||||||.+| .+..++.  +.+++++..+++|+.||+.||+|||+++|++|||||+|||||++|++||+|||+|
T Consensus       114 ~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFA  191 (355)
T KOG0616|consen  114 KDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFA  191 (355)
T ss_pred             ccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccce
Confidence            999999999999995 5666554  4589999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      +.+.+      ...+.||||.|+|||++..+   +|..++|+||||+++|||+.|.+||...++.+++++|..+..  .+
T Consensus       192 K~v~~------rT~TlCGTPeYLAPEii~sk---~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v--~f  260 (355)
T KOG0616|consen  192 KRVSG------RTWTLCGTPEYLAPEIIQSK---GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV--KF  260 (355)
T ss_pred             EEecC------cEEEecCCccccChHHhhcC---CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc--cC
Confidence            98743      35678999999999999755   788999999999999999999999999999999999987754  47


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      |..+++++++|++.+|+.|-++|.     ...+|.. .+++..+|....++...+|+.|
T Consensus       261 P~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p  319 (355)
T KOG0616|consen  261 PSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP  319 (355)
T ss_pred             CcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence            899999999999999999999994     4567766 6677889999998888888776

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-47  Score=389.66  Aligned_cols=254  Identities=24%  Similarity=0.390  Sum_probs=219.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|..++++.++.||+|..|+||++.|+.|++      .+|+|++........+....++.+++..+ +||+||.+||.
T Consensus        73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~------i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~yga  145 (364)
T KOG0581|consen   73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPTGK------IYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGA  145 (364)
T ss_pred             ccccCHHHhhhhhhcccCCCcEEEEEEEcCCCe------EEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEE
Confidence            345667799999999999999999999988774      89999996655555555555555556666 99999999999


Q ss_pred             EEECC-EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccC
Q 007046          115 SVING-KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       115 ~~~~~-~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      |..++ .++|+||||.|++++.+.. ..+++++...-+++.++++||.|||. ++||||||||+|||++..|.|||||||
T Consensus       146 F~~~~~~isI~mEYMDgGSLd~~~k-~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFG  224 (364)
T KOG0581|consen  146 FYSNGEEISICMEYMDGGSLDDILK-RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFG  224 (364)
T ss_pred             EEeCCceEEeehhhcCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccc
Confidence            99999 5999999999544454432 34789999999999999999999996 899999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHh
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVR  267 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-----~~~ei~~~i~~  267 (620)
                      .++.+.+     +...+++||..|||||.+++.   .|+.++||||||++++|+.+|+.||...     ...+++..|..
T Consensus       225 VS~~lvn-----S~a~tfvGT~~YMsPERi~g~---~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~  296 (364)
T KOG0581|consen  225 VSGILVN-----SIANTFVGTSAYMSPERISGE---SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD  296 (364)
T ss_pred             ccHHhhh-----hhcccccccccccChhhhcCC---cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc
Confidence            9998854     356788999999999999865   7999999999999999999999999874     56788888875


Q ss_pred             ccCCCCCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~~p~~-~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      + .+|.+|.. +|+++++|+..||++||.+||++.++++
T Consensus       297 ~-ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  297 E-PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             C-CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            4 46677876 9999999999999999999999999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-46  Score=399.74  Aligned_cols=268  Identities=22%  Similarity=0.325  Sum_probs=230.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+.+|...+.||+|+|++|++|+.+.++      ++||||++.+....+  ......++...+..+.+||+|++|+--
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~------keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T  142 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATG------KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT  142 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCC------ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE
Confidence            677899999999999999999999987765      589999997644322  222333444445555699999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.++..+|+|+||++ |+|++++.+  -+.|++.+++.|+.||+.||+|||++|||||||||+|||||++++++|+|||.
T Consensus       143 FQD~~sLYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGs  220 (604)
T KOG0592|consen  143 FQDEESLYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGS  220 (604)
T ss_pred             eecccceEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccc
Confidence            999999999999999 899999974  58999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCC----------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          194 PHLLLGIPLP----------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       194 a~~~~~~~~~----------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      |+.+......          ......++||..|.+||++...   ..++.+|+|+||||||+|+.|.+||.+.+..-+++
T Consensus       221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~---~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq  297 (604)
T KOG0592|consen  221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS---PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ  297 (604)
T ss_pred             cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC---CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence            9987532211          1122568999999999999744   67889999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCCCCC
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGHG  317 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~~~~  317 (620)
                      +|..-..  .+|.++++.+.+||+++|..||.+|++..+|.+ .|+...+|...-
T Consensus       298 kI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw  350 (604)
T KOG0592|consen  298 KIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENLW  350 (604)
T ss_pred             HHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhhh
Confidence            9976543  578999999999999999999999999999998 788889998743

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.5e-47  Score=392.05  Aligned_cols=259  Identities=19%  Similarity=0.239  Sum_probs=217.9

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH------HHHHHHHHHHHHHccCCCc
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM------RVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~------~~~~~~~~~~~l~~~~h~n  107 (620)
                      ..+....+.|.+.+.||+|+||.|-+|..+.++      +.||||++++......      .....++. .+++.++|||
T Consensus       165 ~~pks~~d~yii~~~LGsGafg~Vkla~e~~tg------k~vAiKIi~krk~~~~s~~~~~~~~v~~Ei-eILkkL~HP~  237 (475)
T KOG0615|consen  165 VPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTG------KQVAIKIINKRKSTGCSRAIAKTRDVQNEI-EILKKLSHPN  237 (475)
T ss_pred             CccchhcceeEeeeeecCCceeEEEEEEEcccC------cEEEeeeeehhhcccccccccchhhhHHHH-HHHHhcCCCC
Confidence            344456788999999999999999999987776      4899999986443221      11112222 3678889999


Q ss_pred             eeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---
Q 007046          108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---  183 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---  183 (620)
                      ||+++++|...+..||||||++ |+|.+.+.  .++.+.+.....+++||+.||.|||++||+||||||+|||+..+   
T Consensus       238 IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~  315 (475)
T KOG0615|consen  238 IVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED  315 (475)
T ss_pred             EEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence            9999999999999999999999 67888876  56778899999999999999999999999999999999999766   


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IY  262 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e-i~  262 (620)
                      ..+||+|||+|+...    ..+.+.++||||.|.|||++...-...+..++|+||+||+||-+|+|.+||.+..... +.
T Consensus       316 ~llKItDFGlAK~~g----~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~  391 (475)
T KOG0615|consen  316 CLLKITDFGLAKVSG----EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK  391 (475)
T ss_pred             eEEEecccchhhccc----cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH
Confidence            689999999999863    2456778999999999999986644445568999999999999999999999876655 88


Q ss_pred             HHHHhccCCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          263 DAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       263 ~~i~~~~~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++|.++....  .....++++..+||.+||..||++||++.|+|+
T Consensus       392 eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  392 EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            8888776543  445789999999999999999999999999998

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-45  Score=380.82  Aligned_cols=250  Identities=24%  Similarity=0.364  Sum_probs=213.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..+|.+.++||+|+||+||+|+++.++.      +||||.+.+.... +..+.+..+. .+++.++|||||.+++++..+
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~------~VAIK~i~~~~l~~k~~e~L~~Ei-~iLkel~H~nIV~l~d~~~~~   81 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGT------EVAIKCIAKKKLNKKLVELLLSEI-KILKELKHPNIVRLLDCIEDD   81 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCc------eEEeeeehhhccCHHHHHHHHHHH-HHHHhcCCcceeeEEEEEecC
Confidence            4679999999999999999999987764      8999999877533 3333333333 467778999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC------CcEEEecc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA------DRAVLGDV  191 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~------~~vkL~DF  191 (620)
                      +++|||||||. |+|.+++.  +.+.+++..++.++.||+.||++||+++||||||||+||||+.+      -.+||+||
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF  159 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF  159 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence            99999999999 67666665  45689999999999999999999999999999999999999865      45899999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-  270 (620)
                      |+|+.+..    .....+.||||.|||||++.   .+.|+.|+|+||+|+|+|+|++|+.||...+..+++..+.++.. 
T Consensus       160 GfAR~L~~----~~~a~tlcGSplYMAPEV~~---~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~  232 (429)
T KOG0595|consen  160 GFARFLQP----GSMAETLCGSPLYMAPEVIM---SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI  232 (429)
T ss_pred             chhhhCCc----hhHHHHhhCCccccCHHHHH---hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc
Confidence            99998852    34456779999999999996   44799999999999999999999999999999999988876654 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.++..+++.+.+++...+..++.+|.++.+-+.
T Consensus       233 ~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  233 VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             cCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence            45566778888999999999999999998887654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-45  Score=388.75  Aligned_cols=263  Identities=26%  Similarity=0.403  Sum_probs=225.5

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ....|+.+.+.+.+.||+|+||+||+|.++.+.       .||||++.........  .+.++.  .++..++|||||+|
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~-------~vavK~~~~~~~~~~~~~~f~~E~--~il~~l~HpNIV~f  104 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTD-------VVAVKIISDPDFDDESRKAFRREA--SLLSRLRHPNIVQF  104 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeCCce-------eEEEEEecchhcChHHHHHHHHHH--HHHHhCCCCCeeeE
Confidence            456688999999999999999999999987653       3999999875533332  333332  35666899999999


Q ss_pred             EEEEEECC-EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeecccCCcEEEccCC-cEE
Q 007046          112 QGISVING-KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEAD-RAV  187 (620)
Q Consensus       112 ~g~~~~~~-~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g-IiHrDLKP~NILld~~~-~vk  187 (620)
                      +|+|.... .++|||||++ |+|.+++.......+++..++.++.||+.||.|||+++ ||||||||+|||++.++ ++|
T Consensus       105 ~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~K  184 (362)
T KOG0192|consen  105 YGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLK  184 (362)
T ss_pred             EEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEE
Confidence            99999877 7999999999 56655555434789999999999999999999999999 99999999999999998 999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||+++......   ...+...||+.|||||++.+. ..+|+.++||||||+++|||+||+.||.+....++...+..
T Consensus       185 I~DFGlsr~~~~~~---~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~  260 (362)
T KOG0192|consen  185 IADFGLSREKVISK---TSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV  260 (362)
T ss_pred             ECCCccceeecccc---ccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            99999998764311   334447899999999999854 45799999999999999999999999999999888888888


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...++.+|..+++.+..++.+||..||..||++.+|+..|..
T Consensus       261 ~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~  302 (362)
T KOG0192|consen  261 GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLES  302 (362)
T ss_pred             cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence            888999999999999999999999999999999999987765

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.9e-46  Score=368.04  Aligned_cols=260  Identities=22%  Similarity=0.385  Sum_probs=215.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEE-
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQG-  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g-  113 (620)
                      ......+|+++++||+|+||+||++.+..+++      .||.|.++-...+.. .+..-.+. -+++.++|||||++++ 
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~------l~a~K~i~f~~md~k~rq~~v~Ei-~lLkQL~HpNIVqYy~~   86 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGK------LVALKKIQFGMMDAKARQDCVKEI-SLLKQLNHPNIVQYYAH   86 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcc------hhhhhhcchhhccHHHHHHHHHHH-HHHHhcCCchHHHHHHH
Confidence            34456789999999999999999999887765      899999984443322 22222222 3778899999999998 


Q ss_pred             EEEECCE-EEEEEecCC-CChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeecccCCcEEEccCCc
Q 007046          114 ISVINGK-ICIIMKFYE-GSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHS--KG--ILVLNLKPFNFILNEADR  185 (620)
Q Consensus       114 ~~~~~~~-~~IVmE~~~-GsLld~l~~~~~--~~l~~~~~~~i~~qIa~gL~yLHs--~g--IiHrDLKP~NILld~~~~  185 (620)
                      .+..+.. ++||||||. |+|...+.+.+.  ..+++..+++++.|+|.||.++|+  ..  |+||||||.||+|+.+|.
T Consensus        87 ~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv  166 (375)
T KOG0591|consen   87 SFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV  166 (375)
T ss_pred             hhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc
Confidence            4444444 999999998 888888776543  679999999999999999999999  45  999999999999999999


Q ss_pred             EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      +||+|||+++++..   ......+.+|||.||+||.+.+.   +|++++||||+||++|||+.-.+||.+.+..++..+|
T Consensus       167 vKLGDfGL~r~l~s---~~tfA~S~VGTPyYMSPE~i~~~---~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI  240 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSS---KTTFAHSLVGTPYYMSPERIHES---GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI  240 (375)
T ss_pred             eeeccchhHhHhcc---hhHHHHhhcCCCcccCHHHHhcC---CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH
Confidence            99999999999854   22334567899999999999754   7999999999999999999999999999999999999


Q ss_pred             HhccCCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          266 VRRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       266 ~~~~~~~~~p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .++.. +++| ..+|.++..||..|+..||+.||+...++..+.+
T Consensus       241 ~qgd~-~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  241 EQGDY-PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HcCCC-CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            87744 4456 7899999999999999999999986555554444

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-44  Score=382.92  Aligned_cols=260  Identities=27%  Similarity=0.420  Sum_probs=223.2

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....|+++.++++++||+|-||.||+|.+..+.       .||+|.++..... ...++++.  .+++.+.|++||++++
T Consensus       199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~-------~vavk~ik~~~m~-~~~f~~Ea--~iMk~L~H~~lV~l~g  268 (468)
T KOG0197|consen  199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGST-------KVAVKTIKEGSMS-PEAFLREA--QIMKKLRHEKLVKLYG  268 (468)
T ss_pred             CCeeecHHHHHHHHHhcCCccceEEEEEEcCCC-------cccceEEeccccC-hhHHHHHH--HHHHhCcccCeEEEEE
Confidence            456688999999999999999999999998775       3999999875432 23444332  3677789999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +|..++.+|||||||+ |+|++++....+..+...+.+.++.|||+|++||+++++|||||.++|||++++..+||+|||
T Consensus       269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFG  348 (468)
T KOG0197|consen  269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFG  348 (468)
T ss_pred             EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccc
Confidence            9999889999999999 999999986566889999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |||...+...  .......-...|.|||.+.   .+.++.+|||||||++||||+| |+.||.+++..++++.+.++.+.
T Consensus       349 LAr~~~d~~Y--~~~~~~kfPIkWtAPEa~~---~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl  423 (468)
T KOG0197|consen  349 LARLIGDDEY--TASEGGKFPIKWTAPEALN---YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL  423 (468)
T ss_pred             cccccCCCce--eecCCCCCCceecCHHHHh---hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC
Confidence            9995533221  1112223356899999996   5689999999999999999999 99999999999999999877665


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      + .|..||+++.+++..||+.+|++|||++.+...|..
T Consensus       424 p-~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  424 P-RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             C-CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence            5 589999999999999999999999999988876655

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-43  Score=365.84  Aligned_cols=257  Identities=31%  Similarity=0.434  Sum_probs=207.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ..+|...+.||+|+||.||++.++.++      ...|||.+....... ...++++. .++..++|||||+++|......
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g------~~~AvK~v~~~~~~~-~~~l~~Ei-~iL~~l~~p~IV~~~G~~~~~~   87 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTG------ELMAVKSVELEDSPT-SESLEREI-RILSRLNHPNIVQYYGSSSSRE   87 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCC------cceeeeeeecccchh-HHHHHHHH-HHHHhCCCCCEEeeCCcccccc
Confidence            677999999999999999999987765      379999987664333 22233333 2455566999999999744433


Q ss_pred             --EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcc
Q 007046          120 --KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPH  195 (620)
Q Consensus       120 --~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~  195 (620)
                        .++|.|||++ |+|.+++.+..+ +|++..+.++..||++||+|||++||+||||||+|||++. ++.+||+|||+++
T Consensus        88 ~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   88 NDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             CeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence              7999999999 677777765333 8999999999999999999999999999999999999999 7999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~-~~~~ei~~~i~~~~~~~~~  274 (620)
                      ................||+.|||||++.+.  ....+++|||||||++.||+||++||.. ....+.+-.+......|.+
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g--~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~i  244 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRNG--EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEI  244 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcCC--CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCC
Confidence            775322223334467899999999999731  1223589999999999999999999987 4444444455555567789


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      |..+|.++++||.+|+.+||++|||+.++|+..
T Consensus       245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  245 PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             CcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            999999999999999999999999999999843

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=371.28  Aligned_cols=254  Identities=26%  Similarity=0.387  Sum_probs=216.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch----hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE----DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~----~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ......|++.+.||+|+||.|++|.+..+++      .||+|++.+...    ........++..++..+..||||++++
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~------~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~   86 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGE------KVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLL   86 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCC------eEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEE
Confidence            3566789999999999999999999887764      899998876411    123334444444444444599999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEec
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGD  190 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~D  190 (620)
                      +++....++|||||||.| +|++.+..  .+++.+.++.+++.||+.|++|||++||+||||||+|||++.+ +++||+|
T Consensus        87 ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~D  164 (370)
T KOG0583|consen   87 EVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSD  164 (370)
T ss_pred             EEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEec
Confidence            999999999999999995 88888874  6899999999999999999999999999999999999999999 9999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s-~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||++....   .......+.|||+.|+|||++.+..  .|+ .++|+||+|++||.|++|..||...+...++..|... 
T Consensus       165 FG~s~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~--~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~-  238 (370)
T KOG0583|consen  165 FGLSAISP---GEDGLLKTFCGSPAYAAPEVLSGKG--TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG-  238 (370)
T ss_pred             cccccccC---CCCCcccCCCCCcccCCHHHhCCCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC-
Confidence            99998763   1234567789999999999998652  154 7899999999999999999999999988888887544 


Q ss_pred             CCCCCCCCC-CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIPSGL-PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p~~~-s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ...+|..+ ++++.+|+.+||..||.+|+++.+|+.
T Consensus       239 -~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  239 -EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             -CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence             45578888 999999999999999999999999996

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.8e-42  Score=356.12  Aligned_cols=273  Identities=21%  Similarity=0.267  Sum_probs=230.8

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHH-HHHHHHHHHHccCCCceeEe
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL-LERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~-~~~~~~~~l~~~~h~nIv~l  111 (620)
                      .....+..++|+++++||.|.-|+||+++.+.++      ..+|+|++.+......... ....++.++++++||.++.|
T Consensus        69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~------~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTL  142 (459)
T KOG0610|consen   69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTN------CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTL  142 (459)
T ss_pred             cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCC------ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchh
Confidence            3457799999999999999999999999988776      4899999987654432222 22233357889999999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      |..|+.+...|++||||+ |+|..++.+..+..|++..+++|+.+++.||+|||..|||+|||||+||||-++|++-|+|
T Consensus       143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsD  222 (459)
T KOG0610|consen  143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSD  222 (459)
T ss_pred             hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeee
Confidence            999999999999999999 5777777777788999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCC-------------------------------C-C---------------------CCCCCCcCCCCCCC
Q 007046          191 VGIPHLLLGIP-------------------------------L-P---------------------SSDLPRRLGTPNYM  217 (620)
Q Consensus       191 FGla~~~~~~~-------------------------------~-~---------------------~~~~~~~~GT~~Ym  217 (620)
                      |.|+......+                               . .                     ......++||-+|+
T Consensus       223 FDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYl  302 (459)
T KOG0610|consen  223 FDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYL  302 (459)
T ss_pred             ccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccc
Confidence            99875432100                               0 0                     00112457999999


Q ss_pred             CcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCC
Q 007046          218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR  297 (620)
Q Consensus       218 APE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~R  297 (620)
                      |||++.++   ..+.++|+|+||+.+||||.|..||.+.+..+.+..|+.+....+-...++..+++||+++|.+||++|
T Consensus       303 APEvI~G~---GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR  379 (459)
T KOG0610|consen  303 APEVIRGE---GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR  379 (459)
T ss_pred             cceeeecC---CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence            99999876   577899999999999999999999999999999999987665544445788999999999999999999


Q ss_pred             CC----HHHHHH-HHHhCCCCC
Q 007046          298 PL----MTDILR-VFKSDGGWT  314 (620)
Q Consensus       298 Ps----~~eil~-~L~~~~~~~  314 (620)
                      ..    +.||.+ .|+.+.+|.
T Consensus       380 lg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  380 LGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             hccccchHHhhcCccccCCChh
Confidence            97    889987 899999998

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-43  Score=365.68  Aligned_cols=255  Identities=20%  Similarity=0.262  Sum_probs=213.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|.++++||.|+||.||+|+...+++      .||||.+++....-.+...-++...++++-.||||+++++++.+
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~------~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d   80 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGE------LVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD   80 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCc------eeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc
Confidence            456789999999999999999999877775      69999998765443333333333334444449999999999998


Q ss_pred             CC-EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NG-KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~-~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++ .+|+|||||+.+|++++.. ++..|++..+..|+.||++||+|+|.+|+.||||||||||+..+..+||+|||+||.
T Consensus        81 ~~~~L~fVfE~Md~NLYqLmK~-R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARe  159 (538)
T KOG0661|consen   81 NDRILYFVFEFMDCNLYQLMKD-RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLARE  159 (538)
T ss_pred             cCceEeeeHHhhhhhHHHHHhh-cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccc
Confidence            87 8999999999999999987 588999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC---
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---  273 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~---  273 (620)
                      ..+    ....+..+.|.+|.|||++..  .+-|+.+.|+||+|||++|+.+-++.|.|.+..+.+.+|..--..|.   
T Consensus       160 v~S----kpPYTeYVSTRWYRAPEvLLr--s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~  233 (538)
T KOG0661|consen  160 VRS----KPPYTEYVSTRWYRAPEVLLR--SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDS  233 (538)
T ss_pred             ccc----CCCcchhhhcccccchHHhhh--ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcccc
Confidence            854    334456788999999999973  45799999999999999999999999999887665555544222211   


Q ss_pred             -------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 -------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 -------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                               +-..++.++.++|.+||..||.+||++.++++
T Consensus       234 ~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  234 WPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             chhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence                                     11347899999999999999999999999998

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8e-42  Score=361.57  Aligned_cols=269  Identities=19%  Similarity=0.333  Sum_probs=207.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..++|++.++||+|+||.||+|.+..... ...++.||+|+++.............+..++..+.+|+||++++++|.
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDK-KSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCC-cccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            4677899999999999999999998754321 233467999999765433322223333334555558999999999887


Q ss_pred             EC-CEEEEEEecCC-CChHHHHHHhc------------------------------------------------------
Q 007046          117 IN-GKICIIMKFYE-GSVGDRMAQLK------------------------------------------------------  140 (620)
Q Consensus       117 ~~-~~~~IVmE~~~-GsLld~l~~~~------------------------------------------------------  140 (620)
                      .. +.+|+||||++ |+|.+.+....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            54 46899999999 57766664321                                                      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCC
Q 007046          141 ------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP  214 (620)
Q Consensus       141 ------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~  214 (620)
                            ..++++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ........+|+
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~  240 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPL  240 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCc
Confidence                  13478889999999999999999999999999999999999999999999999986532211 11122345678


Q ss_pred             CCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcC
Q 007046          215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD  293 (620)
Q Consensus       215 ~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~d  293 (620)
                      .|||||++.+.   .++.++|||||||++|||++ |..||.+....+.+............+..+++++.+++.+||+.|
T Consensus       241 ~y~aPE~~~~~---~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  317 (338)
T cd05102         241 KWMAPESIFDK---VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGD  317 (338)
T ss_pred             cccCcHHhhcC---CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            99999998643   68899999999999999997 999998766544333333344445567889999999999999999


Q ss_pred             cCCCCCHHHHHHHHHhC
Q 007046          294 LRSRPLMTDILRVFKSD  310 (620)
Q Consensus       294 P~~RPs~~eil~~L~~~  310 (620)
                      |++||++.++++.|+..
T Consensus       318 p~~RPs~~el~~~l~~~  334 (338)
T cd05102         318 PKERPTFSALVEILGDL  334 (338)
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=6.9e-43  Score=371.12  Aligned_cols=247  Identities=25%  Similarity=0.394  Sum_probs=216.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|-+.+.||+|+||.||||+.+.+.+      .||||++.+.....  .+...++.  .+++.++||||+.++++|+..
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~------~vAik~i~K~gr~~k~l~~l~~ev--~i~r~lkHpniv~m~esfEt~   73 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQ------VVAIKFIDKSGRNEKELKNLRQEV--RILRSLKHPNIVEMLESFETS   73 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccccee------EEEEEEehhcCCchHHHHHHHHHH--HHHHhcCCcchhhHHHhhccc
Confidence            578899999999999999999877764      89999998754332  22233332  367778999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .++|+|+|||.|+|...+.  .++.++++.+..+++|++.||.|||+++|+|||+||.|||++.++.+|+||||+|+...
T Consensus        74 ~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen   74 AHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS  151 (808)
T ss_pred             ceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc
Confidence            9999999999998888886  46889999999999999999999999999999999999999999999999999999764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      .   .....+...|||.|||||...+.   +|+..+|+||||||+|||++|++||......++...|...  ....|...
T Consensus       152 ~---~t~vltsikGtPlYmAPElv~e~---pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d--~v~~p~~~  223 (808)
T KOG0597|consen  152 T---NTSVLTSIKGTPLYMAPELVEEQ---PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD--PVKPPSTA  223 (808)
T ss_pred             c---CceeeeeccCcccccCHHHHcCC---CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC--CCCCcccc
Confidence            3   34445667899999999999744   8999999999999999999999999999888888888654  44457799


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.+|+..+|.+||.+|.+..+++.
T Consensus       224 S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  224 SSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             cHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            999999999999999999999999987

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-43  Score=377.44  Aligned_cols=264  Identities=28%  Similarity=0.402  Sum_probs=225.3

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ....|.++++.+.++||+|.||+||+|.|+++         ||||+++-+..  +..+.|..+.  ..++.-+|.||+-|
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---------VAVK~Lnv~~pt~~qlqaFKnEV--a~lkkTRH~NIlLF  453 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---------VAVKLLNVDDPTPEQLQAFKNEV--AVLKKTRHENILLF  453 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccccc---------eEEEEEecCCCCHHHHHHHHHHH--HHHhhcchhhheee
Confidence            44559999999999999999999999999863         99999986543  3344444443  35677899999999


Q ss_pred             EEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          112 QGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .|+|..... .||+.+|+|+.+..+.+....+|.....+.|+.||++|+.|||.++|||||||..||+|.+++.|||+||
T Consensus       454 MG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDF  532 (678)
T KOG0193|consen  454 MGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDF  532 (678)
T ss_pred             ehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecc
Confidence            999987766 9999999998888777777788999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      ||+..-.. ...........|...|||||+++.+..-+|++.+||||||+++|||+||..||...+.++++-++.++...
T Consensus       533 GLatvk~~-w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~  611 (678)
T KOG0193|consen  533 GLATVKTR-WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM  611 (678)
T ss_pred             cceeeeee-eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC
Confidence            99865422 12233444556889999999998776779999999999999999999999999988888888888777555


Q ss_pred             CC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~---~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.   ...+++.++++|+..||.+++++||.+.+|+..|+..
T Consensus       612 pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  612 PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence            43   4477899999999999999999999999999966654

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.6e-43  Score=349.97  Aligned_cols=253  Identities=19%  Similarity=0.268  Sum_probs=211.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|+.+.++|+|+||+||+++++.|+      +.||||.+-....+..-......+..+++.++|+|+|.++++|....+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~Tg------qIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk   75 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTG------QIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK   75 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcc------cEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence            56889999999999999999987666      599999996655544433333333358888999999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +++|+|||+-++++.+.+.. ..++...+..|+.|++.|+.|+|++++|||||||+||||..+|.+||||||+|+.+.. 
T Consensus        76 lhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-  153 (396)
T KOG0593|consen   76 LHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-  153 (396)
T ss_pred             eEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence            99999999999999998754 4578999999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--------  272 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--------  272 (620)
                        +....+..+.|.+|.|||.+.+.  .+|...+||||+||++.||++|.+.|.+.+.-+.+..|...-...        
T Consensus       154 --pgd~YTDYVATRWYRaPELLvGD--tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF  229 (396)
T KOG0593|consen  154 --PGDNYTDYVATRWYRAPELLVGD--TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF  229 (396)
T ss_pred             --CcchhhhhhhhhhccChhhhccc--CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh
Confidence              34455667899999999999864  368899999999999999999999999988766555554321110        


Q ss_pred             ---------CCC------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------PIP------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------~~p------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                               .+|            ..++.-+.+|++.||..||++|++.++++.
T Consensus       230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                     011            345677889999999999999999999986

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-41  Score=353.29  Aligned_cols=272  Identities=19%  Similarity=0.280  Sum_probs=225.2

Q ss_pred             cCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCcee
Q 007046           30 TSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        30 ~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      .......-+++++|++...||.|.-++||+|+...+++      .||||+++.++-+.....+.++. ..+.+.+||||+
T Consensus        15 ~~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e------~VAIK~inLEkc~~~ld~l~kE~-~~msl~~HPNIv   87 (516)
T KOG0582|consen   15 SSSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNE------VVAIKIINLEKCNNDLDALRKEV-QTMSLIDHPNIV   87 (516)
T ss_pred             ccccccCCCCccceeEEEEEeccceeEeeeeeecccCC------EEEEEEeehhhhhhhHHHHHHHH-HHhhhcCCCCcc
Confidence            33444556899999999999999999999999988875      79999998766544434444443 357788999999


Q ss_pred             EeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          110 WLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      .++-.|..+..+|+||.||. |++++.+...-...+++..+..++++++.||.|||.+|.||||||+.||||+.+|.|||
T Consensus        88 ~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkL  167 (516)
T KOG0582|consen   88 TYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKL  167 (516)
T ss_pred             eEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEE
Confidence            99999999999999999998 89999988765667999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|||.+-.+.+.... ...+.++.|||.|||||++..+.+ .|++|+||||||++..||.+|..||....+.+++-.-++
T Consensus       168 adFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~-GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq  246 (516)
T KOG0582|consen  168 ADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLH-GYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ  246 (516)
T ss_pred             cCceeeeeecccCceeeEeeccccCcccccChHHhhhccc-CccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence            999987665443211 112266799999999999765544 599999999999999999999999999999988766655


Q ss_pred             ccCCCC----C----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHh
Q 007046          268 RQEIPP----I----PSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKS  309 (620)
Q Consensus       268 ~~~~~~----~----p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~  309 (620)
                      +..+..    +    ...++..++.++..||.+||++||+++++++ .|++
T Consensus       247 n~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  247 NDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             CCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            433211    1    1346778999999999999999999999998 3433

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-43  Score=351.60  Aligned_cols=295  Identities=19%  Similarity=0.286  Sum_probs=244.7

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHH-HHHHHHHccCCCceeEeE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER-LNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~-~~~~~l~~~~h~nIv~l~  112 (620)
                      ....+..++|..++.||+|.||.|.+++.+.++      +.||||+++++-.-...+..+. -+..+++.-+||.+..+.
T Consensus       161 ~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~------k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LK  234 (516)
T KOG0690|consen  161 RKNKVTMEDFDFLKVLGKGTFGKVILCREKATG------KLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLK  234 (516)
T ss_pred             ccceeccchhhHHHHhcCCccceEEEEeecccC------ceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhh
Confidence            355678899999999999999999999977766      4899999987543222222222 122456667899999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      ..|+.++++|+||||+.| .|.-.+.  +...+++..+..|..+|+.||.|||+++|++||||.+|+|+|.+|++||+||
T Consensus       235 YsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDF  312 (516)
T KOG0690|consen  235 YSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDF  312 (516)
T ss_pred             hhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeec
Confidence            999999999999999996 4433333  4567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+.-..   ....+.++||||.|+|||++...   .|..++|+|.+|+++|||++|++||...+...++..|....  
T Consensus       313 GLCKE~I~---~g~t~kTFCGTPEYLAPEVleDn---DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed--  384 (516)
T KOG0690|consen  313 GLCKEEIK---YGDTTKTFCGTPEYLAPEVLEDN---DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED--  384 (516)
T ss_pred             ccchhccc---ccceeccccCChhhcCchhhccc---cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh--
Confidence            99986432   34556789999999999999754   68889999999999999999999999999999999887654  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCccc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVV  345 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  345 (620)
                      ..+|..++++++.|+..+|.+||.+|.     ++.||.+ .|+...+|.......+.+|++|+..+-   .+...+++..
T Consensus       385 ~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSe---tDTryFD~EF  461 (516)
T KOG0690|consen  385 LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSE---TDTRYFDEEF  461 (516)
T ss_pred             ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccc---cchhhhhhhh
Confidence            347899999999999999999999997     4677776 788899999999999999999986543   3444444444


Q ss_pred             cc
Q 007046          346 RS  347 (620)
Q Consensus       346 ~~  347 (620)
                      ++
T Consensus       462 T~  463 (516)
T KOG0690|consen  462 TS  463 (516)
T ss_pred             hc
Confidence            33

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.3e-41  Score=359.70  Aligned_cols=263  Identities=21%  Similarity=0.289  Sum_probs=214.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .....++|++.+.||+|+||.||+|++..++      +.||+|+++........  .....+. .+++.++||||+++++
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~   85 (329)
T PTZ00263         13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTG------EYYAIKCLKKREILKMKQVQHVAQEK-SILMELSHPFIVNMMC   85 (329)
T ss_pred             CCCCchheEEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHH-HHHHhCCCCCCCcEEE
Confidence            4446789999999999999999999987665      47999999754321111  1112222 3556679999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..++.+|+||||++| +|.+.+.  ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        86 ~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg  163 (329)
T PTZ00263         86 SFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFG  163 (329)
T ss_pred             EEEcCCEEEEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeecc
Confidence            99999999999999985 6666665  35678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++....      .....+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ..
T Consensus       164 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~  232 (329)
T PTZ00263        164 FAKKVPD------RTFTLCGTPEYLAPEVIQSK---GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RL  232 (329)
T ss_pred             CceEcCC------CcceecCChhhcCHHHHcCC---CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--Cc
Confidence            9986532      22345799999999998754   5788999999999999999999999998888888877654  34


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGS  318 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~  318 (620)
                      .+|..++.++++||.+||+.||++||+     ++++++ .+....+|.....
T Consensus       233 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~  284 (329)
T PTZ00263        233 KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYA  284 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence            567789999999999999999999996     788886 3444555554433

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.4e-41  Score=358.28  Aligned_cols=263  Identities=20%  Similarity=0.314  Sum_probs=211.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|.+..++      +.||||+++......   ......+  ..+++.++|+||+++++++..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e--~~~l~~l~hp~i~~~~~~~~~~~~~~l   72 (323)
T cd05571           1 KLLGKGTFGKVILVREKATG------KYYAMKILKKEVIIAKDEVAHTLTE--SRVLQNTRHPFLTALKYSFQTHDRLCF   72 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHHHH--HHHHHhCCCCCCCCEEEEEEcCCEEEE
Confidence            46999999999999976655      489999997543211   1222222  235666799999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....   
T Consensus        73 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~---  147 (323)
T cd05571          73 VMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS---  147 (323)
T ss_pred             EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc---
Confidence            9999995 5555554  456789999999999999999999999999999999999999999999999999875422   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                      ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+...+...+...  ...+|..+++++
T Consensus       148 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~  222 (323)
T cd05571         148 DGATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEA  222 (323)
T ss_pred             CCCcccceecCccccChhhhcCC---CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHH
Confidence            12223456799999999998643   6888999999999999999999999988888877776543  345678899999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .++|.+||+.||++||     ++.++++ .+....+|.........++..+
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05571         223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKP  273 (323)
T ss_pred             HHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999     7999987 4555566665555454444443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.6e-41  Score=349.47  Aligned_cols=272  Identities=18%  Similarity=0.288  Sum_probs=214.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .|++.+.||+|+||.||+|.+..++      +.||+|.+.........  .....+ ..++..++|+||+.+++++..++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E-~~il~~l~~~~iv~~~~~~~~~~   73 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNE-KRILEKVNSRFVVSLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCC------ceEEEEEeeHhhhhhhhhHHHHHHH-HHHHHhcCCCcEEEEEEEEccCC
Confidence            3889999999999999999987665      48999998754322211  111122 23566779999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|+||||++| +|.+.+.......+++..+..++.|++.||+|||+.+|+||||||+|||++.++.++|+|||+++...
T Consensus        74 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          74 ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            99999999995 55555544344578999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPS  276 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~--~~~~~~~p~  276 (620)
                      .    ........||+.|||||++.+.   .++.++|||||||++|+|++|+.||.+.........+..  ......++.
T Consensus       154 ~----~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05631         154 E----GETVRGRVGTVGYMAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSE  226 (285)
T ss_pred             C----CCeecCCCCCCCccCHhhhcCC---CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCc
Confidence            2    1222345799999999999643   688899999999999999999999987654322222211  122344677


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .+++++.+|+++||..||.+||+     ++++++ .+....+|.......+.+|+.|
T Consensus       227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05631         227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP  283 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence            89999999999999999999997     889987 5666677777777776666655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-41  Score=352.91  Aligned_cols=259  Identities=24%  Similarity=0.295  Sum_probs=211.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++.......  .......+. .+++.++||||+++++++.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~   73 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISE------HYYALKVMAIPEVIRLKQEQHVHNEK-RVLKEVSHPFIIRLFWTEHDQ   73 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCC------CEEEEEEEEHHHHhhhHHHHHHHHHH-HHHHhCCCCcHhhhHhhhccC
Confidence            47999999999999999999987655      479999997543221  111122222 356778999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~  151 (291)
T cd05612          74 RFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL  151 (291)
T ss_pred             CeEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhc
Confidence            99999999998 56666665  3467899999999999999999999999999999999999999999999999999866


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..      .....+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..++++.+...  ...++..
T Consensus       152 ~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~  220 (291)
T cd05612         152 RD------RTWTLCGTPEYLAPEVIQSK---GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEFPRH  220 (291)
T ss_pred             cC------CcccccCChhhcCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCcc
Confidence            32      22345799999999998654   5788999999999999999999999999888888887654  3456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCc
Q 007046          278 LPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSR  319 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~  319 (620)
                      +++.++++|++||+.||.+||+     +.++++ .+....+|....+.
T Consensus       221 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~  268 (291)
T cd05612         221 LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQR  268 (291)
T ss_pred             CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcC
Confidence            8999999999999999999995     888887 33334455444433

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.6e-42  Score=371.50  Aligned_cols=248  Identities=22%  Similarity=0.336  Sum_probs=217.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .-|++.+.||.|+-|.|.+|++..|+      +.+|||++.+...  +....-.+++ .++++++.||||++++++++..
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TG------qlaaiKii~k~~~~s~s~~~~IerE-IviMkLi~HpnVl~LydVwe~~   84 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETG------QLAAIKIIPKRSELSSSQPAGIERE-IVIMKLIEHPNVLRLYDVWENK   84 (786)
T ss_pred             cceeccccccCCCCceehhhhccccc------ceeEEEeeccccccccccccchhhh-hHHHHHhcCCCeeeeeeeeccC
Confidence            34999999999999999999986665      5899999976532  2222223333 3588999999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      .++|+|.||++ |.|++++.  +.+++++.++.+++.||+.|+.|+|..+|+||||||+|+|||.++++||+|||+|..-
T Consensus        85 ~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen   85 QHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE  162 (786)
T ss_pred             ceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc
Confidence            99999999999 78888886  5789999999999999999999999999999999999999999999999999999764


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      .    ......+.||+|.|.|||++.++.+  ...++||||+|||||.||||++||.+.+...++.++..+  ...+|..
T Consensus       163 ~----~gklLeTSCGSPHYA~PEIV~G~pY--dG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G--~f~MPs~  234 (786)
T KOG0588|consen  163 V----PGKLLETSCGSPHYAAPEIVSGRPY--DGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG--VFEMPSN  234 (786)
T ss_pred             c----CCccccccCCCcccCCchhhcCCCC--CCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC--cccCCCc
Confidence            3    3455678899999999999987733  237899999999999999999999999999999998655  4567899


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +|+++++||.+||..||..|.+++||++
T Consensus       235 Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  235 ISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhh
Confidence            9999999999999999999999999998

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-41  Score=359.31  Aligned_cols=257  Identities=19%  Similarity=0.302  Sum_probs=216.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      -..+.|+.+++||+|+||.||+|++..++      +.||+|.++.+..+.........+..+++.++||||++|.+....
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~tg------kivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~  187 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLETG------KIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS  187 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecccC------cEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe
Confidence            34578999999999999999999987666      489999998776443332222223357888999999999999887


Q ss_pred             C--CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          118 N--GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       118 ~--~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .  +.+|||+|||+.+|..++.. .+-.|++.++..|+.||+.||+|+|++||+|||||.+|||||.+|.+||+|||||+
T Consensus       188 ~~~~siYlVFeYMdhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  188 KLSGSIYLVFEYMDHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             cCCceEEEEEecccchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence            6  68999999999988887764 56789999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--  273 (620)
                      ++...  .....+..+-|.+|.|||.+.|..  .|+.++|+||.||||.||++|++.|.+.+..+.++.|.+--..|.  
T Consensus       267 ~y~~~--~~~~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~  342 (560)
T KOG0600|consen  267 FYTPS--GSAPYTSRVVTLWYRPPELLLGAT--SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTED  342 (560)
T ss_pred             eccCC--CCcccccceEEeeccChHHhcCCc--ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChh
Confidence            87542  223467778999999999999764  699999999999999999999999999998888888865333221  


Q ss_pred             ------CC-------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ------IP-------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ------~p-------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                            +|                   ..++....+|+..+|..||++|.|+.++|+
T Consensus       343 ~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  343 YWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence                  11                   246788899999999999999999999987

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=6.7e-41  Score=353.16  Aligned_cols=268  Identities=21%  Similarity=0.260  Sum_probs=209.5

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHH--HHHccCCCceeEeEEEEEEC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDL--FLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~--~l~~~~h~nIv~l~g~~~~~  118 (620)
                      |++.+.||+|+||.||+|.+..++      +.||||+++......  ....+..+..+  .+...+|+||+++++++...
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~   74 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTG------ELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE   74 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC
Confidence            788999999999999999987665      479999997543111  11112222212  23456899999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+|+||||++|+.+....  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        75 ~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589          75 DHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM  152 (324)
T ss_pred             CEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence            9999999999964443332  45679999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      .   ........+||+.|||||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+++..+....  ...|..+
T Consensus       153 ~---~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~~p~~~  224 (324)
T cd05589         153 G---FGDRTSTFCGTPEFLAPEVLTET---SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE--VRYPRFL  224 (324)
T ss_pred             C---CCCcccccccCccccCHhHhcCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCC
Confidence            2   12223456899999999998644   57889999999999999999999999998888888776543  3467789


Q ss_pred             CHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          279 PPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      ++++.++|.+||..||.+||     ++.++++ .+....+|.........++..
T Consensus       225 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~  278 (324)
T cd05589         225 SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFV  278 (324)
T ss_pred             CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCcc
Confidence            99999999999999999999     5777776 333444444433333334433

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1e-40  Score=351.67  Aligned_cols=271  Identities=21%  Similarity=0.290  Sum_probs=217.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|.+..++      +.||||++++......  ......+..++....+|++|+++++++...+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~   74 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD   74 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC
Confidence            5899999999999999999986655      4799999976432111  1111222223444557899999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+||||||++ |+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        75 ~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          75 RLYFVMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             EEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            9999999998 56666654  34678999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      .   ........+||+.|||||++.+.   .++.++|+|||||++|||++|+.||.+.+..+++..+...  ...+|..+
T Consensus       153 ~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~  224 (323)
T cd05616         153 W---DGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSM  224 (323)
T ss_pred             C---CCCccccCCCChhhcCHHHhcCC---CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCcC
Confidence            1   11223456799999999999643   6889999999999999999999999999988888877654  34567889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          279 PPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      +.++.+++.+||++||++|++.     .++++ .+....+|.........+|..+.
T Consensus       225 s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05616         225 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPK  280 (323)
T ss_pred             CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence            9999999999999999999974     66665 45556677776666666655543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=4.5e-41  Score=357.82  Aligned_cols=276  Identities=19%  Similarity=0.202  Sum_probs=222.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++     ...||+|++.......  .......+. .++..++||||++++
T Consensus        24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~Iv~~~   97 (340)
T PTZ00426         24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNED-----FPPVAIKRFEKSKIIKQKQVDHVFSER-KILNYINHPFCVNLY   97 (340)
T ss_pred             CCCCChhhcEEEEEEeecCCeEEEEEEEECCC-----CeEEEEEEEEHHHhhhhhhHHHHHHHH-HHHHhCCCCCCcceE
Confidence            45578899999999999999999999875543     2479999986432211  111112222 356777999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++..++.+|+||||++ |+|.+.+.  +...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        98 ~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DF  175 (340)
T PTZ00426         98 GSFKDESYLYLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDF  175 (340)
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecC
Confidence            99999999999999998 56666664  4567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....      ......||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+...+++.+....  
T Consensus       176 G~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~--  244 (340)
T PTZ00426        176 GFAKVVDT------RTYTLCGTPEYIAPEILLNV---GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI--  244 (340)
T ss_pred             CCCeecCC------CcceecCChhhcCHHHHhCC---CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC--
Confidence            99986532      22456899999999998643   57889999999999999999999999988888888776543  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      ..+|..+++++.++|++||+.||++|+     +++++++ .+....+|..........|..|.+
T Consensus       245 ~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~  308 (340)
T PTZ00426        245 IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKY  308 (340)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence            346788999999999999999999995     8999987 455556676655555555555543

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=6.5e-41  Score=352.45  Aligned_cols=264  Identities=23%  Similarity=0.349  Sum_probs=208.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|++..++      +.||||+++....   ....... .+..++....+|+||+++++++..++.+|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-~e~~~l~~~~~hp~i~~~~~~~~~~~~~~l   73 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTN------EFFAIKALKKDVVLEDDDVECTM-VERRVLALAWEHPFLTHLFCTFQTKEHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHH-HHHHHHHhccCCCCccceeeEEEcCCEEEE
Confidence            46999999999999987665      4799999975432   1112222 222234455689999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        74 v~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--  149 (316)
T cd05592          74 VMEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--  149 (316)
T ss_pred             EEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC--
Confidence            9999985 5555554  3467999999999999999999999999999999999999999999999999999765321  


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                       .......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+..  ..+.+|..++.++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~  223 (316)
T cd05592         150 -EGKASTFCGTPDYIAPEILKGQ---KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRPHFPRWISKEA  223 (316)
T ss_pred             -CCccccccCCccccCHHHHcCC---CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHH
Confidence             1233456799999999998644   578899999999999999999999999988888877754  3456788899999


Q ss_pred             HHHHHHhhhcCcCCCCCHH-HHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRPLMT-DILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RPs~~-eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .++|.+||+.||++||++. ++++ .+....+|........++++.+
T Consensus       224 ~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05592         224 KDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERLEKREIPPPFKP  270 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999875 5655 4444555655444444444433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.4e-40  Score=354.66  Aligned_cols=266  Identities=22%  Similarity=0.288  Sum_probs=208.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||+||+|.+..++      +.||||+++......  .......+. .++...+|+||+++++.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~-~il~~~~~~~iv~~~~~~~~~   73 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTG------HVYAMKILRKADMLEKEQVGHIRAER-DILVEADSLWVVKMFYSFQDK   73 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhhHHHHHHHHH-HHHHhCCCCCcceEEEEEecC
Confidence            57999999999999999999976655      489999997543211  111222222 355667999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ..+||||||++| +|.+.+.  +.+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          74 LNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CeEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            999999999985 6666665  3568999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCC--------------------------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHH
Q 007046          198 LGIPLP--------------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE  245 (620)
Q Consensus       198 ~~~~~~--------------------------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~e  245 (620)
                      ......                                .......+||+.|||||++.+.   .++.++|+|||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DvwSlGvil~e  228 (363)
T cd05628         152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYE  228 (363)
T ss_pred             cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC---CCCCchhhhhhHHHHHH
Confidence            321000                                0011245799999999998643   68889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCCCCC--CCCHHHHHHHHHhhhcCcC---CCCCHHHHHH-HHHhCCCCCCCCCc
Q 007046          246 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLR---SRPLMTDILR-VFKSDGGWTGHGSR  319 (620)
Q Consensus       246 lltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~--~~s~~l~~Li~~cL~~dP~---~RPs~~eil~-~L~~~~~~~~~~~~  319 (620)
                      |++|..||.+.+..+.+..+........+|.  .++++++++|.+++. +|.   .||++++|++ .+....+|......
T Consensus       229 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~~  307 (363)
T cd05628         229 MLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHIRER  307 (363)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHHHhC
Confidence            9999999999998888888875443333443  478999999998664 444   5689999998 56666677655443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-40  Score=351.68  Aligned_cols=265  Identities=18%  Similarity=0.298  Sum_probs=207.6

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHH-HHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~-~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      +.||+|+||.||++.+..++      ..||+|+++............ ..+..+++.++||||+++++++..++.+||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   74 (323)
T cd05595           1 KLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   74 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEE
Confidence            46999999999999976655      489999997543211111111 11123566679999999999999999999999


Q ss_pred             ecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....   .
T Consensus        75 E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---~  149 (323)
T cd05595          75 EYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---G  149 (323)
T ss_pred             eCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC---C
Confidence            99995 5544443  3467899999999999999999999999999999999999999999999999998754221   1


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      .......||+.|||||++.+.   .++.++|+|||||++|||++|+.||...+..+....+...  ...+|..+++++.+
T Consensus       150 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~  224 (323)
T cd05595         150 ATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAKS  224 (323)
T ss_pred             CccccccCCcCcCCcccccCC---CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHH
Confidence            223446799999999998643   6888999999999999999999999988888777776543  33467889999999


Q ss_pred             HHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          285 VLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       285 Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      +|.+||+.||++|+     ++.++++ .+.....|.........++..+
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05595         225 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP  273 (323)
T ss_pred             HHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCC
Confidence            99999999999998     8899887 3444445554444444444433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.2e-41  Score=379.53  Aligned_cols=273  Identities=23%  Similarity=0.359  Sum_probs=234.3

Q ss_pred             CCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           32 NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        32 ~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      +.....|...+.+..++||+|+||+||+|+..+... ......||||.|+.....+++..++++.+ ++..++|+|||+|
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p-~~~~~lVAVK~LKd~a~~~~~~dF~REae-Lla~l~H~nIVrL  554 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLP-GQDEQLVAVKALKDKAENQARQDFRREAE-LLAELQHPNIVRL  554 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCC-CccceehhHhhhcccccHHHHHHHHHHHH-HHHhccCCCeEEE
Confidence            334556899999999999999999999999876553 35668999999998888877777777664 5677899999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhc--------CC----CCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLK--------GG----KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~--------~~----~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      +|+|..++.+|+|+|||. |+|-+++....        +.    +|+..+.+.|+.|||.|++||-++.++||||..+|+
T Consensus       555 lGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNC  634 (774)
T KOG1026|consen  555 LGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNC  634 (774)
T ss_pred             EEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhc
Confidence            999999999999999998 88888775321        12    388899999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS  257 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~  257 (620)
                      |+.++..|||+||||+|-..+.+... ......-..+||+||.+.   +++|+.++|||||||+|||+++ |++||.+..
T Consensus       635 LVge~l~VKIsDfGLsRdiYssDYYk-~~~~t~lPIRWMppEsIl---y~kFTteSDVWs~GVvLWEIFsyG~QPy~glS  710 (774)
T KOG1026|consen  635 LVGENLVVKISDFGLSRDIYSSDYYK-VRGNTLLPIRWMPPESIL---YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS  710 (774)
T ss_pred             eeccceEEEecccccchhhhhhhhhc-ccCCceeeeecCCHHHhh---cCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence            99999999999999998764322211 111223467999999995   7789999999999999999999 999999999


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .+++++.|..++. .+.|.+||.++++|+..||+.+|.+||+++||-..|+...
T Consensus       711 n~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~  763 (774)
T KOG1026|consen  711 NQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA  763 (774)
T ss_pred             hHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence            9999999988776 6689999999999999999999999999999999888754

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.1e-40  Score=351.31  Aligned_cols=264  Identities=22%  Similarity=0.304  Sum_probs=208.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|.+..++      +.||||++.+...   ........ +..++....+|+||+++++++...+.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~-e~~~l~~~~~h~~iv~~~~~~~~~~~~~i   73 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESG------RLYAVKVLKKDVILQDDDVECTMT-EKRILSLARNHPFLTQLYCCFQTPDRLFF   73 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCC------CEEEEEEEEHHHHhhccHHHHHHH-HHHHHHhccCCCchhceeeEEEcCCEEEE
Confidence            46999999999999976655      4799999975421   11222222 22234445589999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  +...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   
T Consensus        74 v~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~---  148 (320)
T cd05590          74 VMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF---  148 (320)
T ss_pred             EEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc---
Confidence            9999995 5555554  346799999999999999999999999999999999999999999999999999875422   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                      .........||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+...  ...++..++.++
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~  223 (320)
T cd05590         149 NGKTTSTFCGTPDYIAPEILQEM---LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLSQDA  223 (320)
T ss_pred             CCCcccccccCccccCHHHHcCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHH
Confidence            12233456799999999998643   6788999999999999999999999999988888877644  344677899999


Q ss_pred             HHHHHHhhhcCcCCCCCH------HHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRPLM------TDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RPs~------~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .++|.+||+.||++||++      +++++ .+....+|.....+...+++.+
T Consensus       224 ~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~  275 (320)
T cd05590         224 VDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRP  275 (320)
T ss_pred             HHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999998      67776 4445556655544444444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=9.2e-41  Score=351.66  Aligned_cols=264  Identities=19%  Similarity=0.275  Sum_probs=210.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|++..++      +.||||++.....   ........ +..++....+|+||+++++++..++.+|+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~-e~~il~~~~~hp~i~~~~~~~~~~~~~~l   73 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTD------EVYAIKVLKKDVILQDDDVDCTMT-EKRILALAAKHPFLTALHCCFQTKDRLFF   73 (321)
T ss_pred             CccccCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhhhHHHHHHH-HHHHHHhccCCCCccceeeEEEcCCeEEE
Confidence            46999999999999986655      4799999975422   11122222 22234445689999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....   
T Consensus        74 v~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~---  148 (321)
T cd05591          74 VMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL---  148 (321)
T ss_pred             EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceeccc---
Confidence            9999985 5655554  456789999999999999999999999999999999999999999999999999876432   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                      .........||+.|||||++.+.   .++.++|+|||||++|+|++|+.||...+..+.++.+....  ..+|..++.++
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~  223 (321)
T cd05591         149 NGVTTTTFCGTPDYIAPEILQEL---EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD--VLYPVWLSKEA  223 (321)
T ss_pred             CCccccccccCccccCHHHHcCC---CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHH
Confidence            12223456799999999998643   68889999999999999999999999999888888876543  34567789999


Q ss_pred             HHHHHHhhhcCcCCCC-------CHHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRP-------LMTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RP-------s~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .+++.+||+.||++||       ++.++++ .+....+|.........+++.+
T Consensus       224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~  276 (321)
T cd05591         224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKP  276 (321)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCC
Confidence            9999999999999999       7888887 4445556665555444444433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.7e-40  Score=350.13  Aligned_cols=268  Identities=23%  Similarity=0.323  Sum_probs=210.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++++.||+|+||.||+|++..++      +.||||+++....   .....+.. +..++....+|++|+.+++++...
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~-e~~~l~~~~~~~~i~~~~~~~~~~   73 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVIIQDDDVECTMV-EKRVLALPGKPPFLTQLHSCFQTM   73 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHH-HHHHHHhcCCCCceeeeEEEEEcC
Confidence            5899999999999999999977655      4799999975421   11222222 222333444556799999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          74 DRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             CEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            99999999998 46655554  3467899999999999999999999999999999999999999999999999998753


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..   ........+||+.|+|||++.+.   .++.++|+|||||++|+|+||+.||.+.+..+.+..+...  ...+|..
T Consensus       152 ~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~~~~  223 (324)
T cd05587         152 IF---GGKTTRTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYPKS  223 (324)
T ss_pred             CC---CCCceeeecCCccccChhhhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCC
Confidence            21   12223456799999999999644   6788999999999999999999999999888888877643  4456788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      +++++.+++.+||.+||.+|++.     .++++ .+....+|.........+++.
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~  278 (324)
T cd05587         224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFK  278 (324)
T ss_pred             CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcc
Confidence            99999999999999999999976     56665 344445565444444333433

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=3.6e-40  Score=355.74  Aligned_cols=264  Identities=20%  Similarity=0.204  Sum_probs=204.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +.|+++++||+|+||.||+|++..++      +.||||+++......  ....+..+. .++...+|+||+++++++...
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~E~-~il~~l~h~~iv~l~~~~~~~   73 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTH------ALYAMKTLRKKDVLNRNQVAHVKAER-DILAEADNEWVVKLYYSFQDK   73 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhHHHHHHHHHH-HHHHhcCCCCeeeeEEEEecC
Confidence            36899999999999999999977655      489999997543211  111222222 356677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+.  +...+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          74 DNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            99999999998 46666665  3467899999999999999999999999999999999999999999999999998643


Q ss_pred             cCCCC--------------------------------------------CCCCCCCcCCCCCCCCcccccCCCCCCCCch
Q 007046          198 LGIPL--------------------------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFE  233 (620)
Q Consensus       198 ~~~~~--------------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~  233 (620)
                      .....                                            ........+||+.|||||++.+.   .++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~  228 (381)
T cd05626         152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK---GYTQL  228 (381)
T ss_pred             ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC---CCCCc
Confidence            11000                                            00001235799999999998643   68889


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHh--hhcCcCCCCCHHHHHH-HHH
Q 007046          234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGC--FEYDLRSRPLMTDILR-VFK  308 (620)
Q Consensus       234 sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~c--L~~dP~~RPs~~eil~-~L~  308 (620)
                      +|||||||++|||++|..||...+..+....+........+|  ..+++++.+||.+|  +..++..|+++.++++ .+.
T Consensus       229 ~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f  308 (381)
T cd05626         229 CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF  308 (381)
T ss_pred             cceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCccc
Confidence            999999999999999999999888776666565433333333  36899999999994  4566667999999998 455


Q ss_pred             hCCCCCCC
Q 007046          309 SDGGWTGH  316 (620)
Q Consensus       309 ~~~~~~~~  316 (620)
                      ...+|...
T Consensus       309 ~~~~~~~~  316 (381)
T cd05626         309 SEVDFSSD  316 (381)
T ss_pred             CCCChhHH
Confidence            55566543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.5e-40  Score=350.25  Aligned_cols=265  Identities=24%  Similarity=0.341  Sum_probs=207.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||||++.........  .....+...+++.++||||+++++++...+..|+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv   74 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADG------KFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFV   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEE
Confidence            46999999999999986655      48999999754322111  11122222356778999999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---~  149 (323)
T cd05575          75 LDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---H  149 (323)
T ss_pred             EcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc---C
Confidence            999995 5555554  356789999999999999999999999999999999999999999999999999875422   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..++++.+...  ...++..+++++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (323)
T cd05575         150 SKTTSTFCGTPEYLAPEVLRKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--PLRLKPNISVSAR  224 (323)
T ss_pred             CCccccccCChhhcChhhhcCC---CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2233456799999999998643   6888999999999999999999999998888888877654  3345677899999


Q ss_pred             HHHHHhhhcCcCCCCCHH----HHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          284 NVLLGCFEYDLRSRPLMT----DILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~----eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      ++|.+||+.||++||++.    ++++ .+....+|.........+|+.+
T Consensus       225 ~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05575         225 HLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNP  273 (323)
T ss_pred             HHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCC
Confidence            999999999999999874    5554 2333445544444444444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=348.60  Aligned_cols=239  Identities=23%  Similarity=0.354  Sum_probs=196.9

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ||+|+||.||+|.+..++      +.||+|+++....   .....+..+ . .++..++||||+++++++...+..|+||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~E-~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~   72 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQ------RIYALKTIRKAHIVSRSEVTHTLAE-R-TVLAQVNCPFIVPLKFSFQSPEKLYLVL   72 (312)
T ss_pred             CCcCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHH-H-HHHHhCCCCcEeceeeEEecCCeEEEEE
Confidence            799999999999976654      4799999975321   111222222 2 3566679999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++ |+|.+.+.  +.+.+++..+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||+++.....   .
T Consensus        73 e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---~  147 (312)
T cd05585          73 AFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD---D  147 (312)
T ss_pred             cCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC---C
Confidence            9998 46666664  3567999999999999999999999999999999999999999999999999998764321   1


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......+||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ...++..+++++.+
T Consensus       148 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  222 (312)
T cd05585         148 DKTNTFCGTPEYLAPELLLGH---GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE--PLRFPDGFDRDAKD  222 (312)
T ss_pred             CccccccCCcccCCHHHHcCC---CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--CCCCCCcCCHHHHH
Confidence            223456799999999998643   6888999999999999999999999998888888777543  44567889999999


Q ss_pred             HHHHhhhcCcCCCCC---HHHHHH
Q 007046          285 VLLGCFEYDLRSRPL---MTDILR  305 (620)
Q Consensus       285 Li~~cL~~dP~~RPs---~~eil~  305 (620)
                      +|.+||+.||++||+   +.++++
T Consensus       223 li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         223 LLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHcCCCHHHcCCCCCHHHHHc
Confidence            999999999999985   677776

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.7e-40  Score=348.27  Aligned_cols=273  Identities=21%  Similarity=0.297  Sum_probs=206.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.+.||+|+||.||++++...   ...++.||+|++.+....   ........+..++..+.+|+||+++++++..+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTG---HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE   77 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEccc---CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC
Confidence            589999999999999999986432   234578999999753221   11122222333444455799999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+
T Consensus        78 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          78 AKLHLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             CEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            99999999998 56666664  3467899999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhccCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~----~~~ei~~~i~~~~~~~~  273 (620)
                      ....  .......+||+.|||||++.+.  ..++.++|||||||++|||++|..||...    ....+...+..  ..+.
T Consensus       156 ~~~~--~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~  229 (332)
T cd05614         156 LSEE--KERTYSFCGTIEYMAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPP  229 (332)
T ss_pred             cccC--CCccccccCCccccCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCC
Confidence            3221  1122346799999999998643  24678999999999999999999999643    23334443432  3455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKS  325 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~  325 (620)
                      ++..+++.+.+++.+||+.||++||     +++++++ .+....+|.........+++
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~  287 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPF  287 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCc
Confidence            6788999999999999999999999     7788887 33334445444433333333

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.9e-40  Score=349.45  Aligned_cols=262  Identities=21%  Similarity=0.300  Sum_probs=207.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||++.+..++      +.||+|++......   ....+..+.  .+++.++|+||+++++++..++.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~~~~~~~~~~~~l   72 (328)
T cd05593           1 KLLGKGTFGKVILVREKASG------KYYAMKILKKEVIIAKDEVAHTLTES--RVLKNTRHPFLTSLKYSFQTKDRLCF   72 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHH--HHHHhCCCCCCcceEEEEEcCCEEEE
Confidence            46999999999999976655      48999999754321   112222222  35677899999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        73 v~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--  148 (328)
T cd05593          73 VMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--  148 (328)
T ss_pred             EEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc--
Confidence            9999985 5555554  3567999999999999999999999999999999999999999999999999998754221  


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                       .......+||+.|||||++.+.   .++.++|+|||||++|+|++|..||...+..++...+...  ...+|..+++++
T Consensus       149 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~  222 (328)
T cd05593         149 -AATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--DIKFPRTLSADA  222 (328)
T ss_pred             -ccccccccCCcCccChhhhcCC---CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC--CccCCCCCCHHH
Confidence             1223456799999999998643   5788999999999999999999999988887777766433  345678899999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      .++|.+||+.||++|+     ++.++++ .+....+|.........++..
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~  272 (328)
T cd05593         223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFK  272 (328)
T ss_pred             HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcC
Confidence            9999999999999997     8999987 344444555444333334433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.3e-40  Score=348.32  Aligned_cols=253  Identities=25%  Similarity=0.337  Sum_probs=202.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|++..++      ..||+|+++....  .........+..++....+|+||+++++++...+.+|+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   74 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKG------EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFV   74 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEE
Confidence            46999999999999987665      4799999975421  111112222233344556899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....   .
T Consensus        75 ~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~  149 (316)
T cd05620          75 MEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF---G  149 (316)
T ss_pred             ECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc---C
Confidence            999985 6656654  346789999999999999999999999999999999999999999999999999875321   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..++.+.+...  .+.++..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  224 (316)
T cd05620         150 DNRASTFCGTPDYIAPEILQGL---KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPHYPRWITKESK  224 (316)
T ss_pred             CCceeccCCCcCccCHHHHcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            2233456799999999999644   6888999999999999999999999998888887776543  4556778999999


Q ss_pred             HHHHHhhhcCcCCCCCHH-HHHH-HHHhCCCCCC
Q 007046          284 NVLLGCFEYDLRSRPLMT-DILR-VFKSDGGWTG  315 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~-eil~-~L~~~~~~~~  315 (620)
                      ++|.+||+.||++||++. ++++ .+....+|..
T Consensus       225 ~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~  258 (316)
T cd05620         225 DILEKLFERDPTRRLGVVGNIRGHPFFKTINWTA  258 (316)
T ss_pred             HHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHH
Confidence            999999999999999984 6664 3444444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=7.5e-40  Score=334.68  Aligned_cols=262  Identities=19%  Similarity=0.264  Sum_probs=210.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.+.||+|+||.||+|.++...   ..+..||+|+++..........+..+. ..+..++||||+++++++..
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~---~~~~~vaik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~   77 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPS---KRELPVAIHTLRAGCSDKQRRGFLAEA-LTLGQFDHSNIVRLEGVITR   77 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCC---CceeeEEEEecCCCCCHHHHHHHHHHH-HHHhcCCCCCcCeEEEEEec
Confidence            67788999999999999999999876433   234689999998654433332222222 24556799999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++..|+||||+++++++.+.......+++..++.++.||+.||+|||+++++||||||+|||++.++.++++|||.+...
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          78 GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999965555444334567899999999999999999999999999999999999999999999999987654


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ....  ........++..|+|||.+.+   ..++.++|+|||||++||+++ |..||...+..++...+.... ..+.+.
T Consensus       158 ~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~  231 (266)
T cd05064         158 KSEA--IYTTMSGKSPVLWAAPEAIQY---HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLPAPR  231 (266)
T ss_pred             cccc--hhcccCCCCceeecCHHHHhh---CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCCCCC
Confidence            2211  111122345778999999864   368899999999999999875 999999988888877775443 345678


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .++..+.+++.+||+.+|.+||++.+|++.|.+
T Consensus       232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         232 NCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=5.4e-40  Score=340.12  Aligned_cols=254  Identities=22%  Similarity=0.297  Sum_probs=203.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +.++|++.++||+|+||.||+|.+..++      ..||+|+++............++. .+++.++|+||+++++++..+
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~   75 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTE------NLVALKEIRLEHEEGAPCTAIREV-SLLKNLKHANIVTLHDIIHTE   75 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCC------CEEEEEEecccccCCcchhHHHHH-HHHHhCCCCCEeeEEEEEcCC
Confidence            4578999999999999999999976655      479999997543322221222222 255667999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||++|++.+.+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        76 ~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          76 RCLTLVFEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CeEEEEEeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            99999999999988887754 44568999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-----  273 (620)
                      ..   ........||+.|+|||.+.+.  ..++.++|+|||||++|+|++|++||.+.+..+.+..+......+.     
T Consensus       155 ~~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
T cd07871         155 VP---TKTYSNEVVTLWYRPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP  229 (288)
T ss_pred             CC---CccccCceecccccChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence            21   1223445789999999998632  3578899999999999999999999998887766655543211100     


Q ss_pred             -----------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 -----------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 -----------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                             ....+++++.+||.+||..||.+|||++|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         230 GITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                                   11346889999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.4e-40  Score=356.01  Aligned_cols=262  Identities=20%  Similarity=0.211  Sum_probs=203.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++++.||+|+||.||+|++..++      +.||||++.......  ......++. .+++.++|+||+++++.+..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~-~il~~l~h~~iv~~~~~~~~~   73 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTN------ALYAMKTLRKADVLMRNQAAHVKAER-DILAEADNEWVVKLYYSFQDK   73 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCC------CEEEEEEEcHHHHHhhhhHHHHHHHH-HHHHhCCCCCcceEEEEEEcC
Confidence            47999999999999999999977654      489999996532211  111122222 356677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+||||||++ |+|.+++.  +.+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|..+
T Consensus        74 ~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          74 DNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             CEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999998 56666664  3467899999999999999999999999999999999999999999999999998533


Q ss_pred             cCCC----------------------------------------CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHH
Q 007046          198 LGIP----------------------------------------LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW  237 (620)
Q Consensus       198 ~~~~----------------------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVw  237 (620)
                      ....                                        .........+||+.|||||++.+.   .++.++|||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diw  228 (376)
T cd05598         152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWW  228 (376)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC---CCCcceeee
Confidence            1000                                        000011235799999999999644   688899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCC---CHHHHHH-HHHhCC
Q 007046          238 GFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP---LMTDILR-VFKSDG  311 (620)
Q Consensus       238 SlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RP---s~~eil~-~L~~~~  311 (620)
                      ||||++|||++|+.||.+.+..+....+........++  ..+++++.++|.+|+ .+|.+|+   ++.++++ .+....
T Consensus       229 SlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         229 SVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             eccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            99999999999999999988877766665433322223  468999999999977 5999999   8999987 344444


Q ss_pred             CCCC
Q 007046          312 GWTG  315 (620)
Q Consensus       312 ~~~~  315 (620)
                      +|..
T Consensus       308 ~~~~  311 (376)
T cd05598         308 DFAS  311 (376)
T ss_pred             CHHH
Confidence            4433

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-40  Score=348.67  Aligned_cols=255  Identities=22%  Similarity=0.352  Sum_probs=207.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.++||+|+||.||+|++..++      +.||||+++......   ...+..+ . .++...+|+||+++++++..
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e-~-~~l~~~~h~~iv~~~~~~~~   72 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTG------EIVALKRMKKSLLFKLNEVRHVLTE-R-DILTTTKSEWLVKLLYAFQD   72 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHHH-H-HHHHhCCCCCCccEEEEEEc
Confidence            47999999999999999999987655      479999997543221   1222222 2 25566689999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++..||||||++| +|.+++.  ..+.+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        73 ~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~  150 (333)
T cd05600          73 DEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKG  150 (333)
T ss_pred             CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence            9999999999985 6666664  456789999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC-
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p-  275 (620)
                      ...      ......||+.|+|||++.+.   .++.++|||||||++|||++|..||...+..+.+..+.........| 
T Consensus       151 ~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  221 (333)
T cd05600         151 IVT------YANSVVGSPDYMAPEVLRGK---GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV  221 (333)
T ss_pred             ccc------ccCCcccCccccChhHhcCC---CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC
Confidence            532      33456799999999998744   68899999999999999999999999988888777765433222222 


Q ss_pred             -----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCC
Q 007046          276 -----SGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWT  314 (620)
Q Consensus       276 -----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~  314 (620)
                           ..++.++.++|.+||..+|.+||++.++++ .+....+|.
T Consensus       222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~  266 (333)
T cd05600         222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWN  266 (333)
T ss_pred             CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHH
Confidence                 256899999999999999999999999997 344444443

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=4.3e-40  Score=346.35  Aligned_cols=264  Identities=22%  Similarity=0.321  Sum_probs=208.0

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|++..++      +.||||+++....   ........ +...+....+||||+++++++...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~-e~~~l~~~~~hp~iv~~~~~~~~~~~~~l   73 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTN------QFFAIKALKKDVVLMDDDVECTMV-EKRVLSLAWEHPFLTHLYCTFQTKENLFF   73 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhcchHHHHHH-HHHHHHhccCCCcCcceEEEEEeCCEEEE
Confidence            46999999999999987655      4799999976421   11222222 22234445699999999999999999999


Q ss_pred             EEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++ |+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   
T Consensus        74 v~ey~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~---  148 (316)
T cd05619          74 VMEYLNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML---  148 (316)
T ss_pred             EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC---
Confidence            999998 56666654  346789999999999999999999999999999999999999999999999999875422   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                      .........||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..++++.+...  .+.+|..++.++
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~  223 (316)
T cd05619         149 GDAKTCTFCGTPDYIAPEILLGQ---KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREA  223 (316)
T ss_pred             CCCceeeecCCccccCHHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHH
Confidence            11223456799999999998643   6889999999999999999999999998888888777543  345677899999


Q ss_pred             HHHHHHhhhcCcCCCCCHH-HHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRPLMT-DILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RPs~~-eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .+++.+||+.||++||++. ++++ .+....+|.........++..+
T Consensus       224 ~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05619         224 KDILVKLFVREPERRLGVKGDIRQHPFFREIDWSALEEREIEPPFKP  270 (316)
T ss_pred             HHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHHHhCCCCCCcCC
Confidence            9999999999999999997 6665 4555556654444444444433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.3e-40  Score=347.08  Aligned_cols=258  Identities=21%  Similarity=0.288  Sum_probs=204.6

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||++++....   ..++.||+|+++.......   ......+ ..+++.++||||+++++++..++.+|+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~E-~~il~~l~hp~iv~~~~~~~~~~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGA---DTGKIFAMKVLKKATIVRNQKDTAHTKAE-RNILEAVKHPFIVDLIYAFQTGGKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccC---CCCCEEEEEEEEHHHHHhhhhhHHHHHHH-HHHHHhCCCCchhceeeEEecCCeEEE
Confidence            67999999999999865322   3457899999975332111   1111122 235677899999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  +.+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        78 v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  153 (323)
T cd05584          78 ILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE--  153 (323)
T ss_pred             EEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC--
Confidence            9999995 5655554  4567899999999999999999999999999999999999999999999999998754321  


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  282 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l  282 (620)
                       ........||+.|+|||++.+.   .++.++|||||||++|||++|..||...+..+.+..+...  ...+|..+++++
T Consensus       154 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~  227 (323)
T cd05584         154 -GTVTHTFCGTIEYMAPEILMRS---GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--KLNLPPYLTPEA  227 (323)
T ss_pred             -CCcccccCCCccccChhhccCC---CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHH
Confidence             1222345799999999998643   5778999999999999999999999998888777777544  345678899999


Q ss_pred             HHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCC
Q 007046          283 ENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGS  318 (620)
Q Consensus       283 ~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~  318 (620)
                      .++|.+||++||++||     ++.++++ .+.....|.....
T Consensus       228 ~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~  269 (323)
T cd05584         228 RDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLA  269 (323)
T ss_pred             HHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhc
Confidence            9999999999999999     7888887 3333344444333

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.7e-40  Score=346.79  Aligned_cols=265  Identities=20%  Similarity=0.285  Sum_probs=208.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||||+++......  .......+..++....+|+||+++++++...+.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv   74 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTD------ELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFV   74 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEE
Confidence            46999999999999987655      479999997543211  1111222222344445899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  +...+++..+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||+++....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---~  149 (318)
T cd05570          75 MEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL---G  149 (318)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc---C
Confidence            999985 5555554  345799999999999999999999999999999999999999999999999999875322   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..++...+...  ...+|..++.++.
T Consensus       150 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (318)
T cd05570         150 GVTTSTFCGTPDYIAPEILSYQ---PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVRYPRWLSKEAK  224 (318)
T ss_pred             CCcccceecCccccCHHHhcCC---CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcCCHHHH
Confidence            2223345799999999999643   6888999999999999999999999988888887777544  3456778999999


Q ss_pred             HHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          284 NVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      +||.+||..||++||++     .++++ .+....+|.........++..+
T Consensus       225 ~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  274 (318)
T cd05570         225 SILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKP  274 (318)
T ss_pred             HHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCC
Confidence            99999999999999999     88887 4444555655444444444433

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=4.9e-40  Score=353.77  Aligned_cols=274  Identities=20%  Similarity=0.281  Sum_probs=217.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++      ..||+|++......  ........+ ..+++..+|+||++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e-~~il~~~~h~~iv~~~  109 (370)
T cd05596          37 KLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSK------QVYAMKLLSKFEMIKRSDSAFFWEE-RDIMAHANSEWIVQLH  109 (370)
T ss_pred             cCCCCHHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHHHH-HHHHHhCCCCCcceEE
Confidence            45577899999999999999999999987655      47999999653211  111112222 2366778999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++..++.+|+||||++| +|.+++.   ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus       110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~Df  186 (370)
T cd05596         110 YAFQDDKYLYMVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF  186 (370)
T ss_pred             EEEecCCEEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEec
Confidence            999999999999999985 5655553   356899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++......  .......+||+.|||||++.+.. ...++.++|+|||||++|||++|..||.+.+....+..+.....
T Consensus       187 G~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~  264 (370)
T cd05596         187 GTCMKMDANG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN  264 (370)
T ss_pred             cceeeccCCC--cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC
Confidence            9998653211  11223467999999999986432 23478899999999999999999999999988888888876554


Q ss_pred             CCCCCC--CCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCCCCCCcc
Q 007046          271 IPPIPS--GLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWTGHGSRI  320 (620)
Q Consensus       271 ~~~~p~--~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~~~~~~~  320 (620)
                      ...+|.  .++.++.++|.+||..+|.+  |+++.++++ .+....+|.....+.
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~~~~~~~  319 (370)
T cd05596         265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWTFDNIRE  319 (370)
T ss_pred             cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChhhHHhcC
Confidence            444454  57999999999999999987  999999998 444455555433333

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-40  Score=353.67  Aligned_cols=263  Identities=21%  Similarity=0.260  Sum_probs=205.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||+|.+..++      +.||||++.......  .......+. .+++..+|+||+++++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~-~il~~l~hp~iv~~~~~~~~~   73 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTG------KIYAMKTLLKSEMFKKDQLAHVKAER-DVLAESDSPWVVSLYYSFQDA   73 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhHHHHHHHHHH-HHHHhCCCCCcceEEEEEEcC
Confidence            47999999999999999999987665      479999986533211  111222222 356668999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+||||||++ |+|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          74 QYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             CeeEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999998 56666664  3467899999999999999999999999999999999999999999999999999643


Q ss_pred             cCCCC------------CC--------------------------------CCCCCcCCCCCCCCcccccCCCCCCCCch
Q 007046          198 LGIPL------------PS--------------------------------SDLPRRLGTPNYMAPEQWQPEVRGPISFE  233 (620)
Q Consensus       198 ~~~~~------------~~--------------------------------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~  233 (620)
                      .....            ..                                ......+||+.|||||++.+.   .++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  228 (377)
T cd05629         152 HKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ---GYGQE  228 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC---CCCCc
Confidence            21000            00                                000124799999999998643   68889


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC--CCCHHHHHHHHHhhhcCcCCC---CCHHHHHH-HH
Q 007046          234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSR---PLMTDILR-VF  307 (620)
Q Consensus       234 sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~--~~s~~l~~Li~~cL~~dP~~R---Ps~~eil~-~L  307 (620)
                      +|+|||||++|||++|..||.+.+..+.+..+........+|.  .++.+++++|.+||. +|.+|   +++.++++ .+
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence            9999999999999999999999888887777765443344443  588999999999997 77776   59999987 34


Q ss_pred             HhCCCCCCC
Q 007046          308 KSDGGWTGH  316 (620)
Q Consensus       308 ~~~~~~~~~  316 (620)
                      ..+.+|...
T Consensus       308 ~~~~~~~~~  316 (377)
T cd05629         308 FRGVDWDTI  316 (377)
T ss_pred             cCCCCHHHH
Confidence            445555443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=4.1e-40  Score=354.90  Aligned_cols=271  Identities=21%  Similarity=0.300  Sum_probs=213.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|++..++. ......||+|+++..........+..+..++..+.+|+||++++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~  110 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGK-EDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA  110 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCc-ccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence            344677899999999999999999999876553 3455689999997654433333333333344444489999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhc-----------------------------------------------------
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLK-----------------------------------------------------  140 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~-----------------------------------------------------  140 (620)
                      |...+..|+|||||+ |+|.+.+....                                                     
T Consensus       111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (374)
T cd05106         111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS  190 (374)
T ss_pred             ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence            999999999999998 67776664321                                                     


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          141 ---------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       141 ---------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                                     ..++++..+++++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ..
T Consensus       191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~  269 (374)
T cd05106         191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YV  269 (374)
T ss_pred             ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-ee
Confidence                           12478889999999999999999999999999999999999999999999999986543211 11


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......+++.|||||++.+   ..++.++|||||||++|||++ |+.||........+..+......+..+..+++++.+
T Consensus       270 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (374)
T cd05106         270 VKGNARLPVKWMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYS  346 (374)
T ss_pred             eccCCCCccceeCHHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHH
Confidence            1122345678999999853   368899999999999999997 999998766555444444444455567778999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          285 VLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ++.+||+.||++||++.++++.|+..
T Consensus       347 li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         347 IMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.1e-40  Score=339.24  Aligned_cols=252  Identities=17%  Similarity=0.266  Sum_probs=200.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHH--HHccCCCceeEeEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLF--LKCQGVEGICWLQGISV  116 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~--l~~~~h~nIv~l~g~~~  116 (620)
                      ++|++.+.||+|+||.||+|++..++     ++.||+|.++......  ......+. .++  +...+||||+++++++.
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~hpniv~~~~~~~   74 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNG-----GRFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVVRLFDVCT   74 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCC-----CeEEEEEEEecccCCCCchHHHHHHH-HHHHhhcccCCCCcceEEEEEe
Confidence            47999999999999999999875433     2579999987543221  11222222 222  23347999999999986


Q ss_pred             E-----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          117 I-----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       117 ~-----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .     ...+++||||+++++.+.+.......+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          75 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             cccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence            3     45699999999999999887655567899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++.....    .......||+.|+|||++.+.   .++.++|+|||||++|||++|.+||.+.+..+.+..+......
T Consensus       155 g~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~  227 (290)
T cd07862         155 GLARIYSFQ----MALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  227 (290)
T ss_pred             cceEeccCC----cccccccccccccChHHHhCC---CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence            999865321    233455799999999998643   6888999999999999999999999988877766666543211


Q ss_pred             C-------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 P-------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~-------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +                         .+...+++.+.+++.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            1                         011357888999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=349.33  Aligned_cols=324  Identities=23%  Similarity=0.326  Sum_probs=255.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHc-cCCCceeEe
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKC-QGVEGICWL  111 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~-~~h~nIv~l  111 (620)
                      ..|...+|..+..||+|+||.|-+|..+.+.+      .||||+|+++-.   +.++-  ...+..++.+ .+.|.++.+
T Consensus       344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdE------LyAiKiLkKDViiQdDDvec--tm~EKrvLAL~~kppFL~ql  415 (683)
T KOG0696|consen  344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDE------LYAIKILKKDVIIQDDDVEC--TMVEKRVLALPGKPPFLVQL  415 (683)
T ss_pred             cceeecccceEEEeccCccceeeeecccCcch------hhhhhhhccceeeecCcccc--eehhhhheecCCCCchHHHH
Confidence            35888999999999999999999999888876      799999987532   22111  1122234444 356789999


Q ss_pred             EEEEEECCEEEEEEecCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~GsLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      +..|++.+++|+||||+.|  +|++-++. -+++.+..+..|+.+|+-||-+||++|||+||||.+|||+|.+|++||+|
T Consensus       416 HScFQTmDRLyFVMEyvnG--GDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~D  493 (683)
T KOG0696|consen  416 HSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIAD  493 (683)
T ss_pred             HHHhhhhhheeeEEEEecC--chhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeee
Confidence            9999999999999999996  33333333 37899999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++.-.-   ......++||||.|+|||++.   +.+|+.++|+||+|++|||||.|++||.+.+.+++++.|.... 
T Consensus       494 FGmcKEni~---~~~TTkTFCGTPdYiAPEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn-  566 (683)
T KOG0696|consen  494 FGMCKENIF---DGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN-  566 (683)
T ss_pred             ccccccccc---CCcceeeecCCCcccccceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc-
Confidence            999986432   344556789999999999996   5589999999999999999999999999999999999997653 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCcc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDV  344 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  344 (620)
                       -.+|..+|.++.++++..|.+.|.+|...     .+|.. .+++.++|.+.+.+.+.+|+.|....-   ++...++..
T Consensus       567 -vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~---r~~eNFD~~  642 (683)
T KOG0696|consen  567 -VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCG---RDAENFDKF  642 (683)
T ss_pred             -CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccC---CchhhhhHH
Confidence             46799999999999999999999999743     45655 788999999999999999999875332   444445555


Q ss_pred             cccCCCCCCCCCCCCCCCCCccc-cccCCCCCCceEEEeecCCCC
Q 007046          345 VRSRKPPNSFKPENMDVPEGRVV-GVEHNTEGESFVLVRVHGIHD  388 (620)
Q Consensus       345 ~~~~~p~~~~~p~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~  388 (620)
                      .+..++.-.       .|+.-+. .+++ +++.+|++++.+=.++
T Consensus       643 Ft~~~~~lT-------PpD~~v~~nldq-~eF~gFsfvNpefv~~  679 (683)
T KOG0696|consen  643 FTREPTDLT-------PPDKLVMMNLDQ-SEFEGFSFVNPEFVKP  679 (683)
T ss_pred             HhcCCCCCC-------CchHHHHhcCch-hhcCceeeeChhhcCC
Confidence            444333222       2222222 2333 3488898887665553

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.1e-39  Score=344.13  Aligned_cols=253  Identities=20%  Similarity=0.279  Sum_probs=196.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      +|++.+.||+|+||.||+|++..++      ..||||.++....  .....+..+.  .+++.++||||+++++++... 
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~~~~~~   72 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTG------EKVAIKKINDVFEHVSDATRILREI--KLLRLLRHPDIVEIKHIMLPPS   72 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCC------CEEEEEEechhhccchhHHHHHHHH--HHHHhCCCCCEeeecceEeccC
Confidence            5999999999999999999976655      4899999874322  1222233322  356677999999999988653 


Q ss_pred             ----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 ----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                          ..+|+|||||+++|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~  150 (338)
T cd07859          73 RREFKDIYVVFELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLA  150 (338)
T ss_pred             CCCCceEEEEEecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccc
Confidence                2589999999998888775  3457999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-----
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-----  269 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-----  269 (620)
                      +................||+.|+|||++.+. ...++.++|||||||++|||++|++||.+.+....+..+....     
T Consensus       151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             cccccccCccccccCCCCCCCcCCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            8653322222223456799999999997642 2468889999999999999999999998766443322221100     


Q ss_pred             ---------------------CCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 ---------------------EIPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ---------------------~~~~---~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           ....   ....+++++.+++.+||..||++||+++++++
T Consensus       230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                                 0000   11356788999999999999999999999997

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1e-39  Score=351.37  Aligned_cols=267  Identities=20%  Similarity=0.282  Sum_probs=210.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||+|++.+....  .......++ ..+++..+||||+++++
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e-~~i~~~~~hp~iv~~~~  110 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQ------KVYAMKLLSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLFC  110 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhhHHHHHHH-HHHHHhCCCCCEeeEEE
Confidence            3466789999999999999999999987665      47999999643211  111222222 24667789999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..+..+|+||||++ |+|.+++.   ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       111 ~~~~~~~~~lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG  187 (370)
T cd05621         111 AFQDDKYLYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG  187 (370)
T ss_pred             EEEcCCEEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecc
Confidence            9999999999999998 56666553   3468999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++......  .......+||+.|||||++.+.. .+.++.++|+|||||++|+|++|..||.+.+....+..+......
T Consensus       188 ~a~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~  265 (370)
T cd05621         188 TCMKMDETG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS  265 (370)
T ss_pred             cceecccCC--ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc
Confidence            998763211  11224568999999999986432 224778999999999999999999999998888888888765444


Q ss_pred             CCCCC--CCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCC
Q 007046          272 PPIPS--GLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWT  314 (620)
Q Consensus       272 ~~~p~--~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~  314 (620)
                      ..+|.  .++..+++++..||..++.+  |+++.++++ .+.....|.
T Consensus       266 ~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~~  313 (370)
T cd05621         266 LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWN  313 (370)
T ss_pred             cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCcC
Confidence            44444  56999999999999755543  889999998 333333343

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-41  Score=385.17  Aligned_cols=297  Identities=21%  Similarity=0.277  Sum_probs=241.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hHH-HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DRM-RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+.+++|.+++.||+|+||.|.+++++++++      .||+|++++... ... ..++.++ .-++...+.+-|+.++..
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~------VYAMK~lnK~eMlKr~~tA~F~EE-RDimv~~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEK------VYAMKILNKWEMLKRAETACFREE-RDIMVFGNSEWIVQLHYA  143 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeecccc------chhHHHhhHHHHhhchhHHHHHHH-hHHHHcCCcHHHHHHHHH
Confidence            3789999999999999999999999988875      799999976322 122 2233333 346666678889999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.++.++|+|||||+ |+|+.++.+  ..+++++.+.+|+..|+.||.-||+.|+|||||||+|||||..|++||+|||.
T Consensus       144 FQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGs  221 (1317)
T KOG0612|consen  144 FQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGS  221 (1317)
T ss_pred             hcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchh
Confidence            999999999999999 577777763  34899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccC--CCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQP--EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |-.+...  ..-.....+|||.|++||++..  ...+.|...+|+||+||++|||+.|..||...+..+.|.+|......
T Consensus       222 Clkm~~d--G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~  299 (1317)
T KOG0612|consen  222 CLKMDAD--GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES  299 (1317)
T ss_pred             HHhcCCC--CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence            8766421  1122345689999999999863  22367999999999999999999999999999999999999988777


Q ss_pred             CCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCccc
Q 007046          272 PPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVV  345 (620)
Q Consensus       272 ~~~p--~~~s~~l~~Li~~cL~~dP~~RPs---~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  345 (620)
                      ..+|  ..+|.++++||.+++. +|+.|.+   +++|.. .|+.+.+|.  .-+...+|+.|.+.+.   .|++.++...
T Consensus       300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~--~iR~~~pP~vPevssd---~DTsnFd~~~  373 (1317)
T KOG0612|consen  300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWD--NIRESVPPVVPEVSSD---DDTSNFDVDE  373 (1317)
T ss_pred             cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChh--hhhhcCCCCCCcCCCC---Cccccccccc
Confidence            7777  5689999999999995 7899997   999987 889999993  3445567777776554   4555554444


Q ss_pred             ccCCC
Q 007046          346 RSRKP  350 (620)
Q Consensus       346 ~~~~p  350 (620)
                      ..+.+
T Consensus       374 dd~~~  378 (1317)
T KOG0612|consen  374 DDLRD  378 (1317)
T ss_pred             cccch
Confidence            33333

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.3e-40  Score=347.45  Aligned_cols=266  Identities=19%  Similarity=0.281  Sum_probs=210.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++....  ........++. .+++..+|+||+++++++...
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~i~~~~~~~~i~~~~~~~~~~   73 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATG------DIYAMKVMKKSVLLAQETVSFFEEER-DILSISNSPWIPQLQYAFQDK   73 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHH-HHHHhCCCCCCcceeeEEecC
Confidence            47999999999999999999977655      4899999975432  11222223332 356677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+||||||++ |+|.+++.. ....+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          74 DNLYLVMEYQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             CeEEEEECCCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeEC
Confidence            99999999998 566666643 3467999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .....  .......||+.|+|||++....   ...++.++|+|||||++|||++|..||...+..+.+..+........+
T Consensus       153 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~  230 (330)
T cd05601         153 TANKM--VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKF  230 (330)
T ss_pred             CCCCc--eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCC
Confidence            43211  1223347999999999986321   235778999999999999999999999988887777777655433333


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCCCCC
Q 007046          275 P--SGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGHG  317 (620)
Q Consensus       275 p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~~~~  317 (620)
                      |  ..+++++.+||..||. +|++||++.++++ .+....+|....
T Consensus       231 ~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~~~  275 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWNNIR  275 (330)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHHHHh
Confidence            3  3579999999999997 9999999999987 444445555433

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-40  Score=349.39  Aligned_cols=264  Identities=20%  Similarity=0.327  Sum_probs=210.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++......  .......+. .++...+|+||+++++++..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~   73 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTG------QVYAMKVLRKSDMIKRNQIAHVRAER-DILADADSPWIVKLYYSFQDE   73 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCC------CEEEEEEEEHHHHhhccHHHHHHHHH-HHHHhcCCCCccchhhheecC
Confidence            47999999999999999999987655      489999997543211  111222222 356667899999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+..  .+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  151 (350)
T cd05573          74 EHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKM  151 (350)
T ss_pred             CeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccC
Confidence            99999999998 567666653  368999999999999999999999999999999999999999999999999999866


Q ss_pred             cCCC--------------------------CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCC
Q 007046          198 LGIP--------------------------LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ  251 (620)
Q Consensus       198 ~~~~--------------------------~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~  251 (620)
                      ....                          ..........||+.|+|||++.+.   .++.++|||||||++|||++|+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~  228 (350)
T cd05573         152 NKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT---PYGLECDWWSLGVILYEMLYGFP  228 (350)
T ss_pred             cccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC---CCCCceeeEecchhhhhhccCCC
Confidence            4321                          001122345799999999999754   68899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC-HHHHHH-HHHhCCCCCCCC
Q 007046          252 PRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL-MTDILR-VFKSDGGWTGHG  317 (620)
Q Consensus       252 Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs-~~eil~-~L~~~~~~~~~~  317 (620)
                      ||...+..+.+..+........+|  ..+++++.++|.+||. ||.+||+ +.++++ .+....+|....
T Consensus       229 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~~~~  297 (350)
T cd05573         229 PFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWENLR  297 (350)
T ss_pred             CCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHHHHh
Confidence            999988888777776532222233  3469999999999997 9999999 999997 344455554333

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.5e-39  Score=338.97  Aligned_cols=253  Identities=20%  Similarity=0.293  Sum_probs=198.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||+|+||.||+|++..++      +.||||+++............++. .+++.++|+||+++++++....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~   76 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNG------KLVALKVIRLQEEEGTPFTAIREA-SLLKGLKHANIVLLHDIIHTKE   76 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCC------CEEEEEEeccccccccchhHHHHH-HHHhhCCCCCcCeEEEEEecCC
Confidence            578999999999999999999976554      479999997543322221122222 3566779999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||+++++.+.+.. ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          77 TLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             eEEEEEECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            9999999999999888864 446789999999999999999999999999999999999999999999999999875432


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCC-----
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~~~~-----  273 (620)
                         .........||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+... .+.+..+......+.     
T Consensus       156 ---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (303)
T cd07869         156 ---PSHTYSNEVVTLWYRPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP  230 (303)
T ss_pred             ---CCccCCCCcccCCCCChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence               12233456789999999998632  2578899999999999999999999987543 233332221100000     


Q ss_pred             ----------------CC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----------------IP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----------------~p---------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                      .+         ..+++++.+|+.+||+.||++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                            00         124578899999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-40  Score=348.55  Aligned_cols=263  Identities=21%  Similarity=0.277  Sum_probs=209.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---------H----HHHHHHHHHHHH
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---------R----VLLERLNDLFLK  101 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---------~----~~~~~~~~~~l~  101 (620)
                      +.....++|++++.||+|.||.|-+|++..++      +.||||++++......         .    +...++ ..+++
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~------~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~E-IailK  163 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDG------KLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRRE-IAILK  163 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCC------cEEEEEeechhhhhhhcccccccccccCcHHHHHHH-HHHHH
Confidence            33456688999999999999999999976655      4899999976432111         0    111222 23677


Q ss_pred             ccCCCceeEeEEEEEE--CCEEEEEEecCCCChHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          102 CQGVEGICWLQGISVI--NGKICIIMKFYEGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       102 ~~~h~nIv~l~g~~~~--~~~~~IVmE~~~GsLld~l~~~~~~~-l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      .++|+|||+|+++..+  .+++|||+|||..+-....  -...+ +++.+++.|+++++.||+|||.+|||||||||+|+
T Consensus       164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL  241 (576)
T KOG0585|consen  164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL  241 (576)
T ss_pred             hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence            7899999999999876  4679999999984322222  13455 89999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCC--CCCCCCcCCCCCCCCcccccCCCCCC-CCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLP--SSDLPRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~--~~~~~~~~GT~~YmAPE~~~~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      ||+++|++||+|||.+..+......  ........|||.|||||.+.+..... .+.+.||||+||+||.|+.|+.||.+
T Consensus       242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~  321 (576)
T KOG0585|consen  242 LLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD  321 (576)
T ss_pred             EEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence            9999999999999998876332111  11233468999999999997643222 34678999999999999999999999


Q ss_pred             CCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      ....+++++|.......+....+.+++++||++||++||++|.++.+|...
T Consensus       322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence            999999999987765544444589999999999999999999999999763

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-40  Score=350.44  Aligned_cols=262  Identities=22%  Similarity=0.289  Sum_probs=207.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||++......  ........+. .++..++|+||+++++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~-~il~~l~h~~iv~~~~~~~~~   73 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTG------HIYAMKKLRKSEMLEKEQVAHVRAER-DILAEADNPWVVKLYYSFQDE   73 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHH-HHHHhCCCCCCcceEEEEEcC
Confidence            47999999999999999999987655      48999999753211  1111122222 356667899999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+||||||++| +|.+.+.  ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++.+
T Consensus        74 ~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          74 NYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CeEEEEECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence            999999999985 5656554  3567999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCC-----------------------------------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHH
Q 007046          198 LGIPLPS-----------------------------------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS  242 (620)
Q Consensus       198 ~~~~~~~-----------------------------------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvi  242 (620)
                      .......                                   ......+||+.|||||++.+   ..++.++|+|||||+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~i  228 (364)
T cd05599         152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ---TGYNKECDWWSLGVI  228 (364)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC---CCCCCeeeeecchhH
Confidence            3211000                                   01113469999999999864   368899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC--CCCHHHHHHHHHhhhcCcCCCCC---HHHHHH-HHHhCCCCCC
Q 007046          243 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSRPL---MTDILR-VFKSDGGWTG  315 (620)
Q Consensus       243 l~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~--~~s~~l~~Li~~cL~~dP~~RPs---~~eil~-~L~~~~~~~~  315 (620)
                      +|||++|..||.+.+..+.+..+........++.  .+++++.++|.+|+. +|.+|++   +.++++ .+....+|..
T Consensus       229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~  306 (364)
T cd05599         229 MYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEH  306 (364)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            9999999999999888888777765444333343  578999999999996 9999998   999987 4555555543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.6e-40  Score=346.95  Aligned_cols=242  Identities=24%  Similarity=0.343  Sum_probs=196.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|++..++      +.||+|++.........  .....+...+++..+|+||+++++++...+.+|+|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv   74 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEE------KFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV   74 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEE
Confidence            46999999999999976654      47999999754321111  11122222356678999999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| ++.+.+.  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~---~  149 (325)
T cd05602          75 LDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---H  149 (325)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc---C
Confidence            999995 5555554  356788999999999999999999999999999999999999999999999999875432   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|||||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+...  ...++..+++++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (325)
T cd05602         150 NGTTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQLKPNITNSAR  224 (325)
T ss_pred             CCCcccccCCccccCHHHHcCC---CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CcCCCCCCCHHHH
Confidence            2233456799999999998643   6888999999999999999999999998888888777644  2345668999999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHH
Q 007046          284 NVLLGCFEYDLRSRPLMTDIL  304 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~eil  304 (620)
                      ++|.+||++||.+||++.+.+
T Consensus       225 ~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         225 HLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHHcccCHHHCCCCCCCH
Confidence            999999999999999876433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.1e-39  Score=336.35  Aligned_cols=252  Identities=19%  Similarity=0.249  Sum_probs=200.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||+|++....... ......++. .+++.++|+||+++++++..++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~   73 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETK------EIVAIKKFKDSEENEEVKETTLREL-KMLRTLKQENIVELKEAFRRRG   73 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCC------cEEEEEEEecccccccchhhHHHHH-HHHHhCCCccccchhhhEecCC
Confidence            47999999999999999999987655      479999997543221 111122222 3566779999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+|+||||+++++++.+.. ....+++..+..++.||+.||.|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus        74 ~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          74 KLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            9999999999888887754 346789999999999999999999999999999999999999999999999999987632


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------  271 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~--------  271 (620)
                      ..  ........||+.|+|||++.+.   .++.++|+|||||++|||++|++||.+.+..+....+......        
T Consensus       153 ~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07848         153 GS--NANYTEYVATRWYRSPELLLGA---PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL  227 (287)
T ss_pred             cc--cccccccccccccCCcHHHcCC---CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence            11  1122345799999999998643   5788999999999999999999999887655443332221000        


Q ss_pred             ------------C----------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------P----------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------~----------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                  +          .....++.++.+||++||++||++||+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                        0          011237888999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.5e-41  Score=344.71  Aligned_cols=251  Identities=20%  Similarity=0.291  Sum_probs=217.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHH-HHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL-NDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~-~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .-+|++.+.||+|.||.|-+|+.+.++      ++||||.+++++....+...+.. +..++..++||||+.++++|+..
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sg------R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk  125 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSG------REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK  125 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCC------cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC
Confidence            357999999999999999999876554      68999999987765544443322 22378889999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +++.|||||.. |.|+|++.  ..+.|++.++..+++||.+|+.|+|.++++|||||.+|||+|.|+++||+|||++..+
T Consensus       126 dKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly  203 (668)
T KOG0611|consen  126 DKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY  203 (668)
T ss_pred             ceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh
Confidence            99999999998 78999886  4578999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      .+    .....++||+|.|.+||++++..+  -.+.+|.||||++||.|+.|..||.+.+...+..+|..+.+..+   .
T Consensus       204 ~~----~kfLqTFCGSPLYASPEIvNG~PY--~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP---~  274 (668)
T KOG0611|consen  204 AD----KKFLQTFCGSPLYASPEIVNGTPY--KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP---E  274 (668)
T ss_pred             cc----ccHHHHhcCCcccCCccccCCCCC--CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC---C
Confidence            53    345678999999999999987632  23689999999999999999999999999999999987765432   4


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      -|.++.-||+.||..||++|-++.+|...+
T Consensus       275 ~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  275 TPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence            567788999999999999999999998743

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.9e-41  Score=325.07  Aligned_cols=253  Identities=21%  Similarity=0.288  Sum_probs=219.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .....++|++.+.||+|-||.||+|+.+.+.      -.||+|++.+......  ...+.++. .+...++||||.++++
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~------~IvalKVlfKsqi~~~~v~~qlrREi-EIqs~L~hpnilrlY~   89 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSL------FIVALKVLFKSQILKTQVEHQLRREI-EIQSHLRHPNILRLYG   89 (281)
T ss_pred             cccchhhccccccccCCccccEeEeeeccCC------cEEEEeeeeHHHHHHhcchhhhhhee-EeecccCCccHHhhhh
Confidence            4567789999999999999999999987766      4899999976442221  12222222 2567789999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +|.++...|+++||.+ |+++..+...+..++++..+..|+.|+|.||.|+|.+++|||||||+|+|++..+.+||+|||
T Consensus        90 ~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfG  169 (281)
T KOG0580|consen   90 YFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFG  169 (281)
T ss_pred             heeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence            9999999999999998 888888876667889999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      -+...     +.....+.|||..|.+||+..+.   .++..+|+|++|++.||++.|.+||...+..+.++.|.+..  .
T Consensus       170 wsV~~-----p~~kR~tlcgt~dyl~pEmv~~~---~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~--~  239 (281)
T KOG0580|consen  170 WSVHA-----PSNKRKTLCGTLDYLPPEMVEGR---GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD--L  239 (281)
T ss_pred             ceeec-----CCCCceeeecccccCCHhhcCCC---CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc--c
Confidence            87654     24455678999999999999765   68889999999999999999999999999999999997654  3


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+|..++.+++++|.+|+.++|.+|....|+++
T Consensus       240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  240 KFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            467999999999999999999999999999987

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.2e-39  Score=344.91  Aligned_cols=265  Identities=21%  Similarity=0.309  Sum_probs=203.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||+|++++....  ........+..++.+..+||||+++++++..++.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   74 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTE------RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   74 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEE
Confidence            46999999999999987655      47999999764322  12222233333455566899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~---~  149 (329)
T cd05618          75 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---P  149 (329)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC---C
Confidence            999995 5555543  456799999999999999999999999999999999999999999999999999875422   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHhccCCCCC
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------SVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---------~~~ei~~~i~~~~~~~~~  274 (620)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||...         ....+.+.+..  ....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~  224 (329)
T cd05618         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCC
Confidence            2223456899999999999644   6788999999999999999999999521         11223343432  23457


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCC------HHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPL------MTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs------~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      |..++.++.++|.+||+.||++||+      +.++++ .+....+|.........+++.+
T Consensus       225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~  284 (329)
T cd05618         225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKP  284 (329)
T ss_pred             CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccC
Confidence            8889999999999999999999998      577776 3445556654444444444433

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.3e-39  Score=344.45  Aligned_cols=264  Identities=22%  Similarity=0.311  Sum_probs=203.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||+|+++......  .......+..++....+||||+++++++...+.+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv   74 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTR------RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFV   74 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEE
Confidence            46999999999999987665      479999997643221  1222233333445555899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  +.+++++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---~  149 (329)
T cd05588          75 IEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---P  149 (329)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc---C
Confidence            999985 6655554  456899999999999999999999999999999999999999999999999999875322   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHhccCCCCC
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---------VDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---------~~ei~~~i~~~~~~~~~  274 (620)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||....         ...+.+.+..  ....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  224 (329)
T cd05588         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--KQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc--CCCCC
Confidence            2233456899999999999643   68889999999999999999999996321         1223444433  23456


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCC------HHHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPL------MTDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs------~~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      |..++.++.++|.+||+.||.+|++      +.++++ .+....+|.........++..
T Consensus       225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~  283 (329)
T cd05588         225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYK  283 (329)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCcc
Confidence            7889999999999999999999997      678876 344555665544444444433

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.3e-39  Score=351.14  Aligned_cols=269  Identities=21%  Similarity=0.294  Sum_probs=208.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.++||+|+||.||+|++..... .+.+..||||+++..........+.++..++..+.+||||++++++|
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFK-SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEecccc-CccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            34667789999999999999999998654321 23456899999976543333333333333444444899999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhc------------------------------------------------------
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLK------------------------------------------------------  140 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~------------------------------------------------------  140 (620)
                      ...+..|+|||||+ |+|.+++....                                                      
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            99999999999999 67777664321                                                      


Q ss_pred             -------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          141 -------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       141 -------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                                         ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  268 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS  268 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence                               1247888899999999999999999999999999999999999999999999998664321


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCH
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      . ........+++.|||||.+.+.   .++.++|+|||||++|||++ |..||..................+..+...+.
T Consensus       269 ~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (375)
T cd05104         269 N-YVVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPS  344 (375)
T ss_pred             c-ccccCCCCCCcceeChhHhcCC---CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCH
Confidence            1 1111223456789999998643   68899999999999999998 89999876654433334344344455677899


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ++.+|+.+||+.||++||++.+|++.|+.
T Consensus       345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            99999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=5.3e-40  Score=346.49  Aligned_cols=252  Identities=21%  Similarity=0.333  Sum_probs=202.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      +.||+|+||.||+|.+..++      +.||+|+++......   ...+..+  ..++...+|+||+++++++..++.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~e--~~~l~~~~hp~i~~~~~~~~~~~~~~l   72 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATG------RYYAMKILKKEVIVAKDEVAHTLTE--NRVLQNSRHPFLTALKYSFQTHDRLCF   72 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHH--HHHHHhCCCCCCCceEEEEEcCCEEEE
Confidence            46999999999999976655      489999997543211   1222221  235666799999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      ||||++| +|.+.+.  +...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        73 v~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-  149 (325)
T cd05594          73 VMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-  149 (325)
T ss_pred             EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-
Confidence            9999995 5555443  34678999999999999999999998 79999999999999999999999999998754321 


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHH
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  281 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~  281 (620)
                        ........||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..++...+...  ...+|..++++
T Consensus       150 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~  222 (325)
T cd05594         150 --GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPE  222 (325)
T ss_pred             --CcccccccCCcccCCHHHHccC---CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHH
Confidence              2223445799999999998643   6888999999999999999999999988888777766543  34567889999


Q ss_pred             HHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCC
Q 007046          282 VENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~  316 (620)
                      +.++|.+||+.||++|+     ++.++++ .+.....|...
T Consensus       223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~  263 (325)
T cd05594         223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDV  263 (325)
T ss_pred             HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence            99999999999999997     8999987 33344444433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.3e-39  Score=335.45  Aligned_cols=266  Identities=23%  Similarity=0.311  Sum_probs=205.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCc----------CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTE----------DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~e----------d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      +..++|++.++||+|+||.||+|.+....+          ....+..||+|++...........+.++. .++..++|+|
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~n   80 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEV-KILSRLKDPN   80 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHH-HHHhhcCCCC
Confidence            567899999999999999999998754321          11234579999998754333332222232 2455679999


Q ss_pred             eeEeEEEEEECCEEEEEEecCC-CChHHHHHHhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 007046          108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK-----------------GGKLSLSNVFRYAIDLAQGILQLHSKGIL  169 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~-----------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIi  169 (620)
                      |+++++++...+..|+||||++ |+|.+.+....                 ...+++..+..++.||+.||.|||+.+|+
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            9999999999999999999998 57766664321                 12467788999999999999999999999


Q ss_pred             eecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-
Q 007046          170 VLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-  248 (620)
Q Consensus       170 HrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-  248 (620)
                      ||||||+|||++.++.+||+|||+++.+..... ........+++.|||||++.+   +.++.++|+||||+++|||++ 
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~  236 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILM---GKFTTASDVWAFGVTLWEILML  236 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhc---CCCCchhhhHHHHHHHHHHHHc
Confidence            999999999999999999999999986532211 111223456889999999863   368899999999999999987 


Q ss_pred             -CCCCCCCCCHHHHHHHHHhc------cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          249 -GVQPRCGRSVDEIYDAVVRR------QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       249 -G~~Pf~~~~~~ei~~~i~~~------~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                       +..||...+..+....+...      ......+..++..+.+|+.+||..||++||++.+|.+.|+
T Consensus       237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         237 CKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             cCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence             67889887776665544321      1122345678999999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.9e-39  Score=342.32  Aligned_cols=269  Identities=21%  Similarity=0.325  Sum_probs=211.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|+..+.||+|+||.||+|.+..++      +.||+|+++....   ........ +..++....+|++|+++++++...
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~-e~~~l~~~~~~~~i~~~~~~~~~~   73 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTD------ELYAIKILKKDVVIQDDDVECTMV-EKRVLALQDKPPFLTQLHSCFQTV   73 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHH-HHHHHHhccCCCchhheeeEEecC
Confidence            4788999999999999999987655      4799999975432   11122222 222344445678899999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          74 DRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             CEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence            999999999984 6655554  3467999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...   ........||+.|||||++.+.   .++.++|+|||||++|+|++|..||.+.+..++++.+....  ..+|..
T Consensus       152 ~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~p~~  223 (323)
T cd05615         152 MVD---GVTTRTFCGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPKS  223 (323)
T ss_pred             CCC---CccccCccCCccccCHHHHcCC---CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCcc
Confidence            321   1223345799999999998643   68889999999999999999999999998888888776543  456788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      ++.++.+++.+||++||.+|++.     +++++ .+....+|.....+...+|+.+
T Consensus       224 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~  279 (323)
T cd05615         224 LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKP  279 (323)
T ss_pred             CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccC
Confidence            99999999999999999999974     55655 3444556655555555555444

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=335.92  Aligned_cols=272  Identities=19%  Similarity=0.290  Sum_probs=210.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .|++.+.||+|+||.||++.+..++      +.||+|++.........  .....+. .+++.++|+||+.+++.+..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~   73 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNEK-QILEKVNSRFVVSLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCC------ceEEEEEEehhhhhhhhhHHHHHHHH-HHHHhcCCCCEeeeeeeecCCC
Confidence            4899999999999999999976554      48999999754322211  1111222 3556679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|+||||++| +|.+.+.......+++..+..++.|++.||.|||+.+|+||||||+||++++++.++|+|||+++...
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            99999999985 56555544344679999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPS  276 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~--~~~~~~~p~  276 (620)
                      ..    .......||+.|||||++.+   ..++.++|+|||||++|||++|..||.+.+.......+..  ......++.
T Consensus       154 ~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05605         154 EG----ETIRGRVGTVGYMAPEVVKN---ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSE  226 (285)
T ss_pred             CC----CccccccCCCCccCcHHhcC---CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCc
Confidence            21    12234579999999999864   3688899999999999999999999988765433332221  122344567


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      .++..+.+|+.+||..||++||     +++++++ .+....+|.........+|+.|
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05605         227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP  283 (285)
T ss_pred             ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCC
Confidence            7999999999999999999999     8889887 4444556665555555555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.5e-39  Score=348.99  Aligned_cols=262  Identities=20%  Similarity=0.216  Sum_probs=204.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|+++++||+|+||.||+|++..++      +.||+|++......  ........+. .+++..+|+||+++++.+..+
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~E~-~il~~~~h~~iv~~~~~~~~~   73 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTK------ALYAMKTLRKKDVLLRNQVAHVKAER-DILAEADNEWVVRLYYSFQDK   73 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCC------CEEEEEEEeHHHhhhHHHHHHHHHHH-HHHHhCCCCcCCeEEEEEEeC
Confidence            36999999999999999999987665      47999999753321  1111222222 356677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|||||||+ |+|.+.+.  +.+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          74 DNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            99999999998 46666665  3467899999999999999999999999999999999999999999999999997543


Q ss_pred             cCCCC--------------------------------------------CCCCCCCcCCCCCCCCcccccCCCCCCCCch
Q 007046          198 LGIPL--------------------------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFE  233 (620)
Q Consensus       198 ~~~~~--------------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~  233 (620)
                      .....                                            ........+||+.|||||++.+.   .++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~  228 (382)
T cd05625         152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQL  228 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC---CCCCe
Confidence            11000                                            00011235799999999998643   68889


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCC---HHHHHH-HH
Q 007046          234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDILR-VF  307 (620)
Q Consensus       234 sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs---~~eil~-~L  307 (620)
                      +|+|||||++|||++|+.||.+.+..+....+.........|  ..+++++.++|.+|+ .+|.+|++   +.++++ .+
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  307 (382)
T cd05625         229 CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPF  307 (382)
T ss_pred             eeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCC
Confidence            999999999999999999999988877766665433333333  468999999999987 59999997   888887 44


Q ss_pred             HhCCCCCC
Q 007046          308 KSDGGWTG  315 (620)
Q Consensus       308 ~~~~~~~~  315 (620)
                      ....+|..
T Consensus       308 f~~~~~~~  315 (382)
T cd05625         308 FKTIDFSS  315 (382)
T ss_pred             cCCcChHH
Confidence            45555543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.4e-39  Score=342.46  Aligned_cols=239  Identities=26%  Similarity=0.367  Sum_probs=194.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|++..++      +.||+|++........  ......+...+++..+|+||+++++++...+..|+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv   74 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDG------SFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFV   74 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCC------CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEE
Confidence            46999999999999976554      4899999975432211  111122222356778999999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~---~  149 (321)
T cd05603          75 LDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE---P  149 (321)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC---C
Confidence            999995 5555553  356789999999999999999999999999999999999999999999999999875422   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..++++.+...  ...++...+.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (321)
T cd05603         150 EETTSTFCGTPEYLAPEVLRKE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--PLQLPGGKTVAAC  224 (321)
T ss_pred             CCccccccCCcccCCHHHhcCC---CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHH
Confidence            2223456799999999998643   6888999999999999999999999998888888777543  3456778899999


Q ss_pred             HHHHHhhhcCcCCCCCHH
Q 007046          284 NVLLGCFEYDLRSRPLMT  301 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~  301 (620)
                      ++|.+||+.||.+||+..
T Consensus       225 ~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         225 DLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHHccCCHhhcCCCC
Confidence            999999999999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.6e-40  Score=333.10  Aligned_cols=253  Identities=25%  Similarity=0.274  Sum_probs=210.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|+.+.+|++|+||.||+|+++.|++      .||+|.++.+....-  -..++++.  ++...+|||||.+..+..
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~e------IVALKr~kmekek~GFPItsLREIn--iLl~~~H~NIV~vkEVVv  145 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDE------IVALKRLKMEKEKEGFPITSLREIN--ILLKARHPNIVEVKEVVV  145 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcce------eEEeeecccccccCCCcchhHHHHH--HHHhcCCCCeeeeEEEEe
Confidence            34679999999999999999999888876      899999987653221  12223322  344456999999998876


Q ss_pred             E--CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          117 I--NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       117 ~--~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      -  -+.+|||||||+.+|..++...+ .+|...++..+..|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|
T Consensus       146 G~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLA  224 (419)
T KOG0663|consen  146 GSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLA  224 (419)
T ss_pred             ccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchh
Confidence            4  45799999999999988887644 78999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-  273 (620)
                      |.+..   +...++..+-|.+|.|||.+.+..  .|+...|+||+|||+.||+++++-|.+....+.+++|.+.-..|. 
T Consensus       225 R~ygs---p~k~~T~lVVTLWYRaPELLLG~~--tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte  299 (419)
T KOG0663|consen  225 REYGS---PLKPYTPLVVTLWYRAPELLLGAK--TYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSE  299 (419)
T ss_pred             hhhcC---CcccCcceEEEeeecCHHHhcCCc--ccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcc
Confidence            99854   344566678899999999998653  699999999999999999999999999988877777765333221 


Q ss_pred             ----------------------------CC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----------------------------IP-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----------------------------~p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                  ++ ..++..-.+|+..+|.+||.+|.|+++.|+
T Consensus       300 ~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  300 AIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             ccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence                                        01 125688889999999999999999999997

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=355.96  Aligned_cols=248  Identities=23%  Similarity=0.375  Sum_probs=212.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ..|....+||+|+-|.||.|....++.      .||||.+........+-.+.+.  .+++-.+|+|||.+++.+...+.
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~------~VaiK~m~l~~Q~~keLilnEi--~Vm~~~~H~NiVnfl~Sylv~de  344 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQ------EVAIKRMDLRKQPKKELLLNEI--LVMRDLHHPNIVNFLDSYLVGDE  344 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCc------eEEEEEEEeccCCchhhhHHHH--HHHHhccchHHHHHHHHhcccce
Confidence            568889999999999999999877764      7999999876655555455544  46777899999999999998999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|.||||++| +|.|..   ....+++.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|..+..
T Consensus       345 LWVVMEym~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~  421 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE  421 (550)
T ss_pred             eEEEEeecCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence            9999999995 555554   345699999999999999999999999999999999999999999999999999988754


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~-~~~~~~p~~~  278 (620)
                      .   .....+.+|||.|||||++..+   .|.+++||||||++++||+-|++||...++-..+..|... ......+..+
T Consensus       422 ~---~~KR~TmVGTPYWMAPEVvtrk---~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~kl  495 (550)
T KOG0578|consen  422 E---QSKRSTMVGTPYWMAPEVVTRK---PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKL  495 (550)
T ss_pred             c---cCccccccCCCCccchhhhhhc---ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCcccc
Confidence            2   2345667999999999999754   6889999999999999999999999977766655555443 3344567889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |+++++|+.+||+.|+.+|+++.|+|+
T Consensus       496 S~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  496 SPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             CHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            999999999999999999999999998

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.1e-39  Score=344.14  Aligned_cols=240  Identities=25%  Similarity=0.342  Sum_probs=195.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||+|++.......  .......+...+++..+|+||+++++++..++.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv   74 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDG------KCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFV   74 (325)
T ss_pred             CceeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEE
Confidence            46999999999999976554      489999997542211  1111122222456778999999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~---~  149 (325)
T cd05604          75 LDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA---Q  149 (325)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC---C
Confidence            999995 5555553  456899999999999999999999999999999999999999999999999999875422   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|||||++.+.   .++.++|+|||||++|+|++|..||...+..++++.+....  ..++..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  224 (325)
T cd05604         150 SDTTTTFCGTPEYLAPEVIRKQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--LVLRPGASLTAW  224 (325)
T ss_pred             CCCcccccCChhhCCHHHHcCC---CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--ccCCCCCCHHHH
Confidence            2223456799999999998643   68889999999999999999999999988888888776542  344567899999


Q ss_pred             HHHHHhhhcCcCCCCCHHH
Q 007046          284 NVLLGCFEYDLRSRPLMTD  302 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~e  302 (620)
                      ++|.+||+.+|.+||++.+
T Consensus       225 ~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         225 SILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHhccCHHhcCCCCC
Confidence            9999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=5.8e-39  Score=349.06  Aligned_cols=272  Identities=19%  Similarity=0.276  Sum_probs=212.4

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....++.++|++.+.||+|+||.||+|++..... ......||||+++..........+..+..++..+..||||+++++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~-~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~  108 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSR-SQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLG  108 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCC-CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence            4566788999999999999999999999765432 223457999999765443333333333334444446999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc----------------------------------------------------
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK----------------------------------------------------  140 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~----------------------------------------------------  140 (620)
                      ++...+.+|||||||+ |+|.+.+....                                                    
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (400)
T cd05105         109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY  188 (400)
T ss_pred             EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence            9999999999999998 57766654321                                                    


Q ss_pred             ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          141 ------------------------------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       141 ------------------------------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                                                                ...+++..++.++.||+.||+|||+.+|+||||||+||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni  268 (400)
T cd05105         189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV  268 (400)
T ss_pred             chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence                                                      12477888899999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS  257 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~  257 (620)
                      |++.++.+||+|||+++....... ........+++.|||||.+.+.   .++.++|||||||++|||++ |..||....
T Consensus       269 ll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwSlGvil~ellt~g~~P~~~~~  344 (400)
T cd05105         269 LLAQGKIVKICDFGLARDIMHDSN-YVSKGSTFLPVKWMAPESIFDN---LYTTLSDVWSYGILLWEIFSLGGTPYPGMI  344 (400)
T ss_pred             EEeCCCEEEEEeCCcceecccccc-ccccCCcCCCcceEChhhhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence            999999999999999987643211 1122334578899999998643   57889999999999999997 999998765


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..............+..+..++.++.+++.+||+.||++||++.++.+.|+..
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         345 VDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             hhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            54433333334445556778999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-41  Score=353.28  Aligned_cols=251  Identities=23%  Similarity=0.326  Sum_probs=213.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ....|+.+++||+|+||.||+|.+..+++      .||||++..+.....-+.++++. .++.+.+++||.++|+.+..+
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k------~vAiKii~Le~~~deIediqqei-~~Ls~~~~~~it~yygsyl~g   83 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNKTKK------VVAIKIIDLEEAEDEIEDIQQEI-SVLSQCDSPNITEYYGSYLKG   83 (467)
T ss_pred             cccccccchhccccccceeeeeeeccccc------eEEEEEechhhcchhhHHHHHHH-HHHHhcCcchHHhhhhheeec
Confidence            34568888999999999999999877764      79999998766554444444433 356677889999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ..++|+||||. |++++++.  .+..+.+..+.-++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+-.+
T Consensus        84 ~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql  161 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQL  161 (467)
T ss_pred             ccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeee
Confidence            99999999999 67777775  3455588889999999999999999999999999999999999999999999999877


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...   .....+++|||.|||||++.+.   .|+.++||||||++.|||++|.+||....++.++..|- +..+|.+...
T Consensus       162 ~~~---~~rr~tfvGTPfwMAPEVI~~~---~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~  234 (467)
T KOG0201|consen  162 TNT---VKRRKTFVGTPFWMAPEVIKQS---GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGD  234 (467)
T ss_pred             ech---hhccccccccccccchhhhccc---cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccc
Confidence            542   2233678999999999999854   69999999999999999999999999998876665553 4456667778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++.+++|+..||.+||+.||++.++++
T Consensus       235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  235 FSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            9999999999999999999999999997

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.3e-40  Score=344.17  Aligned_cols=243  Identities=26%  Similarity=0.347  Sum_probs=196.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||++.+....   ..++.||+|+++..............+..+++.++|+||+++++++..++.+|+|||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   78 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGP---DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD   78 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence            57999999999999864321   245689999997543221111111112235667799999999999999999999999


Q ss_pred             cCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++ |+|.+.+.  +...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....   ..
T Consensus        79 ~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---~~  153 (318)
T cd05582          79 FLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---EK  153 (318)
T ss_pred             CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---CC
Confidence            998 56666664  3567899999999999999999999999999999999999999999999999998765321   12


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV  285 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~L  285 (620)
                      ......||+.|||||++.+.   .++.++|+|||||++|||++|+.||...+..+.+..+...  ...+|..+++++.++
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~l  228 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSL  228 (318)
T ss_pred             ceecccCChhhcCHHHHcCC---CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence            23346799999999998643   5788999999999999999999999998888887777543  345678899999999


Q ss_pred             HHHhhhcCcCCCCCHHH
Q 007046          286 LLGCFEYDLRSRPLMTD  302 (620)
Q Consensus       286 i~~cL~~dP~~RPs~~e  302 (620)
                      |++||+.||++||++.+
T Consensus       229 i~~~l~~~P~~R~~a~~  245 (318)
T cd05582         229 LRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHhhcCHhHcCCCCC
Confidence            99999999999999433

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.2e-39  Score=320.76  Aligned_cols=251  Identities=20%  Similarity=0.283  Sum_probs=210.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-H-HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-M-RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|...++||+|.||.||+|++..+++      .||||.++.....+ . ...+++.  .+++.++|+||+.+.++|.+.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~------~VAIKKIkl~~~kdGi~~talREI--K~Lqel~h~nIi~LiD~F~~~   73 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGK------RVAIKKIKLGNAKDGINRTALREI--KLLQELKHPNIIELIDVFPHK   73 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCc------EEEEEEeeccccccCccHHHHHHH--HHHHHccCcchhhhhhhccCC
Confidence            578899999999999999999877764      89999998654321 1 2222222  366778899999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+.||+||++-+|...+.. +...++..++..|+.+++.||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+.
T Consensus        74 ~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~  152 (318)
T KOG0659|consen   74 SNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFG  152 (318)
T ss_pred             CceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccC
Confidence            99999999999888777764 66789999999999999999999999999999999999999999999999999999885


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-----  273 (620)
                      .   +....+..+-|.+|.|||.+-|.  ..|...+|+||.|||+.||+-|.+-|.|.+.-+.+..|...-..|.     
T Consensus       153 ~---p~~~~~~~V~TRWYRAPELLfGs--r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP  227 (318)
T KOG0659|consen  153 S---PNRIQTHQVVTRWYRAPELLFGS--RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP  227 (318)
T ss_pred             C---CCcccccceeeeeccChHHhccc--hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence            4   23334444789999999998764  3688899999999999999999999999988777777765433321     


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ---------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ---------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           +-...+.++.+|+.+||.+||.+|+++.|+++
T Consensus       228 ~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  228 EMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence                                 11345788899999999999999999999997

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=5.5e-39  Score=330.01  Aligned_cols=265  Identities=22%  Similarity=0.372  Sum_probs=214.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.+.||+|+||.||+|.+..... ......||+|.++..........+.++. ..+...+|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~v~~K~~~~~~~~~~~~~~~~ei-~~l~~l~h~~i~~~~~~~~~   79 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGPNE-RLSATSVAIKTLKENAEPKVQQEFRQEA-ELMSDLQHPNIVCLLGVCTK   79 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecCCC-CcceeeEEEEecccCCCHHHHHHHHHHH-HHHHhcCCcccceEEEEEcC
Confidence            456789999999999999999999866542 2345689999997654433333333332 24566789999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKG--------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~--------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      .+..|++|||++ |+|.+.+.....              ..+++..++.++.||+.||.|||+++++|+||||+||+++.
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            899999999998 577776654211              46788999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  261 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei  261 (620)
                      ++.++|+|||+++....... ........+|+.|||||.+.+   +.++.++|+|||||++|||++ |..||.+....++
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~  235 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILY---GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV  235 (283)
T ss_pred             CCcEEECCCcceeecccccc-ccccCCCcccccccCHHHhcc---CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            99999999999876532111 112234467899999999863   368889999999999999998 9999999888888


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+... ..+..+..+++++.+|+.+||+.||.+||++.+|++.|++
T Consensus       236 ~~~i~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         236 IEMIRSR-QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHcC-CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            8777644 3445678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4.8e-39  Score=333.07  Aligned_cols=254  Identities=16%  Similarity=0.235  Sum_probs=207.6

Q ss_pred             cCCCCeeEE--eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           38 IKPSALKLR--HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        38 I~~~~y~i~--~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      |++++++..  ..||+|++|.||+|.+.        ++.||||.++.......  .....++. ..+..++||||+++++
T Consensus        15 i~~~~i~~~~~~~i~~g~~~~v~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         15 IESDDIDKYTSVLIKENDQNSIYKGIFN--------NKEVIIRTFKKFHKGHKVLIDITENEI-KNLRRIDSNNILKIYG   85 (283)
T ss_pred             cCHHHcCCCCCeEEeeCCceEEEEEEEC--------CEEEEEEeccccccccHHHHHHHHHHH-HHHHhcCCCCEEEEee
Confidence            555666665  67999999999999862        35799999976543221  11122222 3566679999999999


Q ss_pred             EEEE----CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEE
Q 007046          114 ISVI----NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       114 ~~~~----~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vk  187 (620)
                      ++.+    ...+++||||++| +|.+.+.  ....+++.....++.|++.||.|||+. +++||||||+|||++.++.+|
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~k  163 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK  163 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEE
Confidence            9877    3578999999995 5666654  346789999999999999999999984 999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||+++.+..      ......||+.|+|||++.+. ...++.++|||||||++|||++|..||.+.+..+++..+..
T Consensus       164 l~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        164 IICHGLEKILSS------PPFKNVNFMVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             EcccchHhhhcc------ccccccCcccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            999999986532      12245789999999998642 24689999999999999999999999999988888888876


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ....+.++..+++++.+++.+||+.||++||++.++++.|..
T Consensus       237 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        237 KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            666677777899999999999999999999999999987764

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.1e-39  Score=339.56  Aligned_cols=266  Identities=20%  Similarity=0.267  Sum_probs=208.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||++.+..++      +.||+|++.+....  .......++. .++...+|++|+.+++++...
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~   73 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNAD------KVFAMKILNKWEMLKRAETACFREER-DVLVNGDNQWITTLHYAFQDE   73 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCC------CEEEEEEEeHHHHHHhhHHHHHHHHH-HHHhhCCCCCEeeEEEEEecC
Confidence            47999999999999999999986655      47999999643211  1111122222 355667999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+.+.+ ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~  152 (332)
T cd05623          74 NNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL  152 (332)
T ss_pred             CEEEEEEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheec
Confidence            99999999998 567666653 3467899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ....  .......+||+.|||||++.+.  ..+.++.++|+|||||++|||++|+.||...+..+.+..+........+|
T Consensus       153 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p  230 (332)
T cd05623         153 MEDG--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP  230 (332)
T ss_pred             ccCC--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCC
Confidence            3211  1122345799999999998632  12357889999999999999999999999988888888876654333333


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCCCC
Q 007046          276 ---SGLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       276 ---~~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~~~  316 (620)
                         ..+++++++|+.+||..++..  |+++.++++ .+....+|...
T Consensus       231 ~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~~~  277 (332)
T cd05623         231 AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWDNI  277 (332)
T ss_pred             CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHHHH
Confidence               467999999999999654443  689999987 44455555543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2e-39  Score=347.02  Aligned_cols=267  Identities=23%  Similarity=0.287  Sum_probs=209.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||||+++......  ....+..+. .++...+|++|+++++.+...
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~iv~~~~~~~~~   73 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTG------HIYAMKILRKADMLEKEQVAHIRAER-DILVEADGAWVVKMFYSFQDK   73 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHH-HHHHhCCCCCEeeEEEEEEcC
Confidence            47999999999999999999987665      479999997532211  111222222 245667899999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+||||||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          74 RNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            999999999985 6666664  4567999999999999999999999999999999999999999999999999998755


Q ss_pred             cCCCCC--------------------------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHH
Q 007046          198 LGIPLP--------------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE  245 (620)
Q Consensus       198 ~~~~~~--------------------------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~e  245 (620)
                      ......                                .......+||+.|||||++.+.   .++.++|+|||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvilye  228 (360)
T cd05627         152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYE  228 (360)
T ss_pred             ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC---CCCCcceeccccceeee
Confidence            321000                                0011245799999999998644   68889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCCCCC--CCCHHHHHHHHHhhhcCcCCCCC---HHHHHH-HHHhCCCCCCCCCc
Q 007046          246 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSRPL---MTDILR-VFKSDGGWTGHGSR  319 (620)
Q Consensus       246 lltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~--~~s~~l~~Li~~cL~~dP~~RPs---~~eil~-~L~~~~~~~~~~~~  319 (620)
                      |++|..||.+.+..+.+..+........+|.  .++++++++|.+|+ .||.+|++   +.++++ .+..+.+|......
T Consensus       229 l~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~  307 (360)
T cd05627         229 MLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWGHIRER  307 (360)
T ss_pred             cccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCCHHHHhcC
Confidence            9999999999998888887765433333343  47899999999987 49999984   778887 55666777765544


Q ss_pred             c
Q 007046          320 I  320 (620)
Q Consensus       320 ~  320 (620)
                      .
T Consensus       308 ~  308 (360)
T cd05627         308 P  308 (360)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=6.5e-39  Score=348.76  Aligned_cols=296  Identities=20%  Similarity=0.250  Sum_probs=226.4

Q ss_pred             cccCCCCCCccccccCCcchhhhhhccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCC
Q 007046            4 KVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV   83 (620)
Q Consensus         4 ~~~~~~p~~~~~e~~~~~~~l~~~~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~   83 (620)
                      +|.+..+++-..++|.++.      +.++.....|..++|.+.++||+|+||.||+|+++... .......||+|+++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~-~~~~~~~vavK~l~~~   78 (401)
T cd05107           6 KVIESVSSDGHEYIYVDPM------QLPYDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLS-HSQSTMKVAVKMLKST   78 (401)
T ss_pred             EEeeeeccCCceEEEECCC------CCCCCCcceecHHHeehhhhccCCCceeEEEEEEcCCC-CCCCceEEEEEecCCC
Confidence            4567777744444444543      33445567799999999999999999999999986432 1234568999999865


Q ss_pred             chhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcC---------------------
Q 007046           84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKG---------------------  141 (620)
Q Consensus        84 ~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~---------------------  141 (620)
                      ........+..+..++.++..|+||+++++++..++..||||||++ |+|.+.+.....                     
T Consensus        79 ~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (401)
T cd05107          79 ARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGS  158 (401)
T ss_pred             CChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccc
Confidence            4333222223333344444459999999999999999999999999 677777653211                     


Q ss_pred             ---------------------------------------------------------------------------CCCCH
Q 007046          142 ---------------------------------------------------------------------------GKLSL  146 (620)
Q Consensus       142 ---------------------------------------------------------------------------~~l~~  146 (620)
                                                                                                 ..+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  238 (401)
T cd05107         159 TPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSY  238 (401)
T ss_pred             ccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCH
Confidence                                                                                       23677


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC
Q 007046          147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV  226 (620)
Q Consensus       147 ~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~  226 (620)
                      ..+..++.||+.||+|||+.+++||||||+|||++.++.+||+|||+++........ .......+++.|||||.+.+  
T Consensus       239 ~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--  315 (401)
T cd05107         239 MDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFN--  315 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcC--
Confidence            788999999999999999999999999999999999999999999999865322111 11223467889999999864  


Q ss_pred             CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          227 RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       227 ~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ..++.++|+||||+++|||++ |..||......+...........+..|..++.++.+|+.+||..+|.+||++.+|++
T Consensus       316 -~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~  394 (401)
T cd05107         316 -NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH  394 (401)
T ss_pred             -CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             357889999999999999998 899998766655544444444455677789999999999999999999999999999


Q ss_pred             HHHhC
Q 007046          306 VFKSD  310 (620)
Q Consensus       306 ~L~~~  310 (620)
                      .|+..
T Consensus       395 ~L~~~  399 (401)
T cd05107         395 LVGDL  399 (401)
T ss_pred             HHHHH
Confidence            88763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.6e-38  Score=336.15  Aligned_cols=251  Identities=22%  Similarity=0.301  Sum_probs=200.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.++||+|+||.||++++..++      ..||+|+++..........+.++. .+++.++|+||+++++++..
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~   74 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSG------LIMARKLIHLEIKPAIRNQIIREL-QVLHECNSPYIVGFYGAFYS   74 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCC------cEEEEEEeecccCHHHHHHHHHHH-HHHHHCCCCCCCeEEEEEEE
Confidence            56789999999999999999999987665      479999997654333222233332 24566789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ++.+++||||++| +|.+.+.  ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  152 (331)
T cd06649          75 DGEISICMEHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG  152 (331)
T ss_pred             CCEEEEEeecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence            9999999999995 6665554  345689999999999999999999986 69999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--------
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--------  267 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~--------  267 (620)
                      .+..     .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||...+..++...+..        
T Consensus       153 ~~~~-----~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (331)
T cd06649         153 QLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEG  224 (331)
T ss_pred             cccc-----cccccCCCCcCcCCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccC
Confidence            6532     223345799999999998643   688899999999999999999999976655443322110        


Q ss_pred             -------------------------------------ccCCCCC-CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 -------------------------------------RQEIPPI-PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 -------------------------------------~~~~~~~-p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                           ....+.. ...+++++++||.+||+.||++||++.+|++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         225 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             CccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                                 0111111 2347899999999999999999999999997

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=7.6e-39  Score=344.71  Aligned_cols=259  Identities=20%  Similarity=0.274  Sum_probs=206.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++      +.||+|++......  .......++ ..+++..+||||++++
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~------~~~aiK~i~~~~~~~~~~~~~~~~e-~~i~~~~~hp~iv~~~  109 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR------KVYAMKLLSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLF  109 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCC------cEEEEEEEEHHHhhhhHHHHHHHHH-HHHHHhCCCCCCCeEE
Confidence            34577799999999999999999999987665      47999998643211  111122222 2356778999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +.+..++.+|+||||++| +|.+++.   ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus       110 ~~~~~~~~~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~Df  186 (371)
T cd05622         110 YAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF  186 (371)
T ss_pred             EEEEcCCEEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeC
Confidence            999999999999999985 5555553   346899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++......  .......+||+.|||||++.+.. .+.++.++|+|||||++|||++|..||.+.+....+..+.....
T Consensus       187 G~a~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  264 (371)
T cd05622         187 GTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN  264 (371)
T ss_pred             CceeEcCcCC--cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            9998763221  11223567999999999987532 22478899999999999999999999999888888888876543


Q ss_pred             CCCCC--CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHH
Q 007046          271 IPPIP--SGLPPAVENVLLGCFEYDLRS--RPLMTDILR  305 (620)
Q Consensus       271 ~~~~p--~~~s~~l~~Li~~cL~~dP~~--RPs~~eil~  305 (620)
                      ...+|  ..++.+++++|..||..++.+  |+++.++++
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~  303 (371)
T cd05622         265 SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  303 (371)
T ss_pred             cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence            33333  468999999999999843332  679999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-41  Score=356.21  Aligned_cols=248  Identities=27%  Similarity=0.348  Sum_probs=215.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -..|..+.+.-++=||.|+.|.||+|+.+.        ++||||+++..++.         ....++.++|+||+.|.|+
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~n--------etVAVKKV~elkET---------dIKHLRkLkH~NII~FkGV  180 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRLHN--------ETVAVKKVRELKET---------DIKHLRKLKHPNIITFKGV  180 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeeccC--------ceehhHHHhhhhhh---------hHHHHHhccCcceeeEeee
Confidence            455777788888899999999999998653        47999988533221         1235677899999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.....+|||||||. |-|...+.  .+.++.......|..+||.|+.|||.+.|||||||.-||||..+..|||+|||.
T Consensus       181 CtqsPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGT  258 (904)
T KOG4721|consen  181 CTQSPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGT  258 (904)
T ss_pred             ecCCceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccc
Confidence            999999999999998 77777765  567889999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++.+.+    ......++||..|||||+++.+   +.+.++|||||||+|||||||..||..-+...++.-+.......+
T Consensus       259 S~e~~~----~STkMSFaGTVaWMAPEvIrne---PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp  331 (904)
T KOG4721|consen  259 SKELSD----KSTKMSFAGTVAWMAPEVIRNE---PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP  331 (904)
T ss_pred             hHhhhh----hhhhhhhhhhHhhhCHHHhhcC---CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc
Confidence            998754    2455678999999999999865   789999999999999999999999998888887777766667778


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .|..||..++-||++||...|..||++.+|+..|.
T Consensus       332 vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  332 VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             CcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            89999999999999999999999999999987543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-39  Score=343.45  Aligned_cols=262  Identities=19%  Similarity=0.261  Sum_probs=199.8

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHH--HHHHHHHHcc--CCCceeEeEEEEEECCEEEEE
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE--RLNDLFLKCQ--GVEGICWLQGISVINGKICII  124 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~--~~~~~~l~~~--~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      ||+|+||.||+|++..++      +.||||++.............  .+..++....  +||||+.+++++.....+|+|
T Consensus         1 lG~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv   74 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTR------RIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLV   74 (330)
T ss_pred             CCCCCceEEEEEEECCCC------CEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEE
Confidence            799999999999976655      489999996432221111111  1122233333  799999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  +.+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++.....   
T Consensus        75 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~---  149 (330)
T cd05586          75 TDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD---  149 (330)
T ss_pred             EcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---
Confidence            999984 6655554  4567999999999999999999999999999999999999999999999999998754221   


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+||+.|||||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+..+....... ....+++++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~  226 (330)
T cd05586         150 NKTTNTFCGTTEYLAPEVLLDE--KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF-PKNVLSDEGR  226 (330)
T ss_pred             CCCccCccCCccccCHHHHcCC--CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCC-CCccCCHHHH
Confidence            1223456799999999998632  247889999999999999999999999988888887776543322 1245799999


Q ss_pred             HHHHHhhhcCcCCCC----CHHHHHH-HHHhCCCCCCCCCccCCCC
Q 007046          284 NVLLGCFEYDLRSRP----LMTDILR-VFKSDGGWTGHGSRILPDK  324 (620)
Q Consensus       284 ~Li~~cL~~dP~~RP----s~~eil~-~L~~~~~~~~~~~~~~~~~  324 (620)
                      ++|.+||..||.+||    ++.++++ .+....+|.........++
T Consensus       227 ~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~  272 (330)
T cd05586         227 QFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPP  272 (330)
T ss_pred             HHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCC
Confidence            999999999999998    5777776 2333334443333333333

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-38  Score=337.90  Aligned_cols=267  Identities=21%  Similarity=0.285  Sum_probs=206.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||++.+..++      +.||+|++++.....  ....+.++. .++...+|+||+.+++++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~   73 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTG------QVYAMKILNKWEMLKRAETACFREER-DVLVNGDRRWITNLHYAFQDE   73 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEHHHHhhhhhHHHHHHHH-HHHHhCCCCCCCceEEEEecC
Confidence            57999999999999999999987655      479999997422111  111222222 355667999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ |+|.+++.+ ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++..+
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597          74 NNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             CeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeec
Confidence            99999999998 566666643 3567999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ....  ........||+.|||||++....  .+.++.++|+|||||++|+|++|+.||.+.+..+.+..+........++
T Consensus       153 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  230 (331)
T cd05597         153 LADG--TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP  230 (331)
T ss_pred             CCCC--CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC
Confidence            3211  11122346999999999986321  2357789999999999999999999999888888777776544333223


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcC--CCCCHHHHHH-HHHhCCCCCCCC
Q 007046          276 ---SGLPPAVENVLLGCFEYDLR--SRPLMTDILR-VFKSDGGWTGHG  317 (620)
Q Consensus       276 ---~~~s~~l~~Li~~cL~~dP~--~RPs~~eil~-~L~~~~~~~~~~  317 (620)
                         ..++.+++++|++||..+++  .|+++.++++ .+....+|....
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~~~  278 (331)
T cd05597         231 PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDNIR  278 (331)
T ss_pred             CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHHHh
Confidence               45799999999998865433  3789999998 344445554433

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.7e-39  Score=338.74  Aligned_cols=266  Identities=22%  Similarity=0.315  Sum_probs=206.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||+|+++......  .......+..++.+..+|+||+.+++++...+.+|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   74 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKND------QIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLV   74 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEE
Confidence            46999999999999976654      479999998643221  1222333333455666899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~---~  149 (327)
T cd05617          75 IEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG---P  149 (327)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC---C
Confidence            999985 5555554  346799999999999999999999999999999999999999999999999999875322   1


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHhccCCCCCCC
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-------SVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-------~~~ei~~~i~~~~~~~~~p~  276 (620)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...       ....+.+.+..  ....+|.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~  224 (327)
T cd05617         150 GDTTSTFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPR  224 (327)
T ss_pred             CCceecccCCcccCCHHHHCCC---CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCC
Confidence            2223456899999999998643   6888999999999999999999999532       12234444432  2345788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC------HHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPL------MTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs------~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      .++..+.+++.+||.+||++|++      +.++++ .+....+|.........+++.+.
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~  283 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQ  283 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCC
Confidence            89999999999999999999997      467776 45556667666555555555444

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=6.7e-39  Score=330.63  Aligned_cols=264  Identities=20%  Similarity=0.299  Sum_probs=201.6

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHH-HHHHHHHHccCCCceeEeEEEEEECCEEEEEEec
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVEGICWLQGISVINGKICIIMKF  127 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~-~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~  127 (620)
                      ||+|+||+||++.+..++      +.||+|++............. ..+..+++.++|+||+++.+++..++..|+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATG------KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCC------cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeC
Confidence            799999999999987665      479999997543322211111 1122356677999999999999999999999999


Q ss_pred             CCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          128 YEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       128 ~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ++| +|.+.+...  ....+++..++.++.||+.||+|||+++|+||||||+||+++.++.++|+|||+++.+...   .
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~---~  151 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG---Q  151 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC---C
Confidence            985 554444322  3357899999999999999999999999999999999999999999999999998765332   1


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhccCCCCCCCCCCH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----EIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~----ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      .......||+.|+|||++.+.   .++.++|+|||||++|||++|+.||......    ++...+.  .....++..+++
T Consensus       152 ~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  226 (280)
T cd05608         152 SKTKGYAGTPGFMAPELLQGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL--NDSVTYPDKFSP  226 (280)
T ss_pred             ccccccCCCcCccCHHHhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc--ccCCCCcccCCH
Confidence            223345799999999999744   6888999999999999999999999765432    2222222  123345678999


Q ss_pred             HHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          281 AVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      ++.+++.+||+.||++||     +++++++ .+.+...|........++|+.
T Consensus       227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~  278 (280)
T cd05608         227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFV  278 (280)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCC
Confidence            999999999999999999     7788887 455555666555544444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.7e-40  Score=350.24  Aligned_cols=253  Identities=22%  Similarity=0.342  Sum_probs=219.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|..++.||+|+||.+++++++....      .|++|.+.-.............+..+++.+.|||||.+.+.|..++
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~------~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~   76 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDK------LYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG   76 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCc------eEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC
Confidence            4689999999999999999999876553      7999999865533222222222223566689999999999999888


Q ss_pred             E-EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          120 K-ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~-~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      . +||||+||+ |++.+.+.+.++..++++.+..|+.|++.|+.|||+++|+|||||+.||++..++.|+|+|||+|+.+
T Consensus        77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             ceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence            8 999999999 57777777767788999999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...   .....+..|||.||+||.+.+.   +|..++|+|||||++|||++-+++|.+.+...+..+|.... ..++|..
T Consensus       157 ~~~---~~~a~tvvGTp~YmcPEil~d~---pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~  229 (426)
T KOG0589|consen  157 NPE---DSLASTVVGTPYYMCPEILSDI---PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSM  229 (426)
T ss_pred             CCc---hhhhheecCCCcccCHHHhCCC---CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCcc
Confidence            532   2245567899999999999865   89999999999999999999999999999999999887665 5668999


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.+++.+|..||..+|..||++.++|.
T Consensus       230 ys~el~~lv~~~l~~~P~~RPsa~~LL~  257 (426)
T KOG0589|consen  230 YSSELRSLVKSMLRKNPEHRPSALELLR  257 (426)
T ss_pred             ccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence            9999999999999999999999999987

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=7.7e-39  Score=338.83  Aligned_cols=266  Identities=20%  Similarity=0.272  Sum_probs=206.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||++.+..++      +.||+|++.......  ......++ ..++...+|+||+.+++++..+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e-~~~l~~~~~~~i~~l~~~~~~~   73 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTE------RIYAMKILNKWEMLKRAETACFREE-RNVLVNGDCQWITTLHYAFQDE   73 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeHHHHHhhHHHHHHHHH-HHHHHhCCCCCEeeEEEEEEcC
Confidence            57999999999999999999976654      479999996532111  11112222 2356667999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +..||||||++ |+|.+++.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus        74 ~~~~lv~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624          74 NYLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             CEEEEEEeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeec
Confidence            99999999998 466666543 3567899999999999999999999999999999999999999999999999999765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ....  .......+||+.|||||++.+..  .+.++.++|+|||||++|+|++|+.||...+..+.+..+........+|
T Consensus       153 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p  230 (331)
T cd05624         153 NQDG--TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP  230 (331)
T ss_pred             cCCC--ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC
Confidence            3211  11123357999999999986421  1357889999999999999999999999888888877776544333333


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCCCC
Q 007046          276 ---SGLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       276 ---~~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~~~  316 (620)
                         ..++.++.++|.+||..++++  |++++++++ .+....+|...
T Consensus       231 ~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~~~  277 (331)
T cd05624         231 SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWENI  277 (331)
T ss_pred             CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHHHH
Confidence               457899999999999865544  458888887 44455556544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.5e-38  Score=324.62  Aligned_cols=263  Identities=21%  Similarity=0.332  Sum_probs=211.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++++|++.+.||+|+||.||+|.+..+++   ....||+|.++.............+. ..++..+||||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~   76 (267)
T cd05066           1 IDASCIKIEKVIGAGEFGEVCSGRLKLPGK---REIPVAIKTLKAGYTEKQRRDFLSEA-SIMGQFDHPNIIHLEGVVTK   76 (267)
T ss_pred             CCHHHeEeeeeecccCCCceEEEEEecCCC---CceEEEEEECCCCCCHHHHHHHHHHH-HHHHhCCCCCcceEEEEEec
Confidence            567899999999999999999999765543   23479999997654333333333332 35566789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++..|+||||++| +|.+.+.. ....+++.+++.++.|++.||.|||+.+++||||||+|||++.++.++|+|||+++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~  155 (267)
T cd05066          77 SKPVMIVTEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRV  155 (267)
T ss_pred             CCccEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence            9999999999985 56555543 446789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ...............++..|+|||++.+.   .++.++|+||||+++||+++ |..||......+....+.... ..+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~  231 (267)
T cd05066         156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RLPAP  231 (267)
T ss_pred             cccccceeeecCCCccceeecCHhHhccC---ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cCCCC
Confidence            64322111112223346789999998643   58889999999999999887 999999888777777766543 34456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+++++.+++.+||+++|.+||++.++++.|..
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         232 MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            6789999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.3e-40  Score=326.22  Aligned_cols=253  Identities=22%  Similarity=0.288  Sum_probs=218.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-------hhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-------EDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-------~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      +.|...+.||+|..+.|.++.++.++.      ++|+|++....       ...+.+....+..++.+...||+|+.+++
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~------e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D   90 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGK------EFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD   90 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhccccc------ceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence            347778899999999999999877664      79999986422       22334444445567888899999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +++.+..+++|+|+|+ |.|.|++.  ..-.+++....++++|+.+|++|||.++|+||||||+|||++++.++||+|||
T Consensus        91 ~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   91 VYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             eccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            9999999999999999 99999997  45689999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ++..+..    .......||||+|+|||.+.+.+   ...|+..+|+||+|+|+|.||.|.+||......-++..|..++
T Consensus       169 Fa~~l~~----GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk  244 (411)
T KOG0599|consen  169 FACQLEP----GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK  244 (411)
T ss_pred             eeeccCC----chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc
Confidence            9988742    34456679999999999987543   3468899999999999999999999999888888888888877


Q ss_pred             CCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....-|  .+++.+.++||.+||+.||++|.|++|+|.
T Consensus       245 yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  245 YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            654433  678999999999999999999999999987

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.7e-38  Score=331.95  Aligned_cols=254  Identities=20%  Similarity=0.300  Sum_probs=202.9

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +.++|++.++||+|+||.||+|++..++      ..||+|.++............++. .+++.++|+||+++++++..+
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~   76 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTE------NLVALKEIRLEHEEGAPCTAIREV-SLLKDLKHANIVTLHDIVHTD   76 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCC------CeEEEEEeeccccCCcchhHHHHH-HHHHhCCCCCcceEEEEEeeC
Confidence            4578999999999999999999976554      479999997544322221222222 245667899999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||+++++.+.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        77 ~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          77 KSLTLVFEYLDKDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             CeEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence            99999999999988887754 34568999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------  272 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~------  272 (620)
                      ..   ........+|+.|+|||++.+.  ..++.++|+|||||++|+|+||+.||.+.+..+....+......+      
T Consensus       156 ~~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  230 (309)
T cd07872         156 VP---TKTYSNEVVTLWYRPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWP  230 (309)
T ss_pred             CC---ccccccccccccccCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Confidence            21   1222345789999999998632  357889999999999999999999999877665554443211100      


Q ss_pred             ----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ----------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                            .....+++++.++|.+||..||.+||++.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         231 GISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                                  011357889999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=8.6e-39  Score=339.71  Aligned_cols=269  Identities=20%  Similarity=0.324  Sum_probs=208.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|.+..++. ..+++.||+|+++.............+...+.+..+|+||++++++|.
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEK-SASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEecccccccc-ccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            4567899999999999999999998765432 345678999999765433222222223334455558999999999886


Q ss_pred             E-CCEEEEEEecCCC-ChHHHHHHhc------------------------------------------------------
Q 007046          117 I-NGKICIIMKFYEG-SVGDRMAQLK------------------------------------------------------  140 (620)
Q Consensus       117 ~-~~~~~IVmE~~~G-sLld~l~~~~------------------------------------------------------  140 (620)
                      . +..++++|||++| +|.+.+....                                                      
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            5 4578999999995 6655554321                                                      


Q ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCC
Q 007046          141 -----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN  215 (620)
Q Consensus       141 -----~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~  215 (620)
                           ..++++..+..++.||+.||+|||+++|+||||||+|||++.++.++|+|||+++.+..... ........++..
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~~  240 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLK  240 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCcc
Confidence                 13678999999999999999999999999999999999999999999999999987643211 111223456788


Q ss_pred             CCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCc
Q 007046          216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL  294 (620)
Q Consensus       216 YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP  294 (620)
                      |||||++.+   ..++.++|+|||||++|||++ |..||.+....+.+.........+..+..+++++.+++.+||+.+|
T Consensus       241 y~aPE~~~~---~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  317 (337)
T cd05054         241 WMAPESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNP  317 (337)
T ss_pred             ccCcHHhcC---CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCCh
Confidence            999999864   368899999999999999998 9999987655454444444444555677889999999999999999


Q ss_pred             CCCCCHHHHHHHHHhC
Q 007046          295 RSRPLMTDILRVFKSD  310 (620)
Q Consensus       295 ~~RPs~~eil~~L~~~  310 (620)
                      ++||++.++++.|...
T Consensus       318 ~~RPs~~ell~~l~~~  333 (337)
T cd05054         318 EDRPTFSELVEILGDL  333 (337)
T ss_pred             hhCcCHHHHHHHHHHH
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.9e-38  Score=351.24  Aligned_cols=253  Identities=21%  Similarity=0.256  Sum_probs=208.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ..|.+.+.||+|+||.||+|....+.     +..||+|.+..........+.. +. .+++.++||||+++++++..++.
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~-----~~~vv~K~~~~~~~~~~~~~~~-E~-~~l~~l~Hpniv~~~~~~~~~~~  139 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDP-----KEKVVAKFVMLNDERQAAYARS-EL-HCLAACDHFGIVKHFDDFKSDDK  139 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCC-----CeEEEEEEcccCCHHHHHHHHH-HH-HHHHhCCCCCEeEEEEEEEECCE
Confidence            44999999999999999999876552     2478999876554333332222 22 35677899999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +||||||++ |+|.+.+...  ...++++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.+
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            999999998 5666665432  3457899999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      .... ........+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+..... .+.+..
T Consensus       220 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~  294 (478)
T PTZ00267        220 SDSV-SLDVASSFCGTPYYLAPELWERK---RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-DPFPCP  294 (478)
T ss_pred             CCcc-ccccccccCCCccccCHhHhCCC---CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCcc
Confidence            4321 11223456799999999998643   688999999999999999999999999888888887765543 346778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.++|.+||..||++||++.+++.
T Consensus       295 ~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        295 VSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            9999999999999999999999999986

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-38  Score=321.58  Aligned_cols=262  Identities=22%  Similarity=0.333  Sum_probs=211.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++++|++.+.||+|+||.||+|.+..+++   ....||||.++.............+. ..++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~vaik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~   76 (266)
T cd05033           1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGK---KEIDVAIKTLKAGSSDKQRLDFLTEA-SIMGQFDHPNIIRLEGVVTK   76 (266)
T ss_pred             CChHHceeeeEecCCccceEEEEEEccCCC---CcceEEEEEcCCCCChHHHHHHHHHH-HHHHhCCCCCcceEeEEEec
Confidence            567899999999999999999999875432   23579999997654433332222222 24566789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++..|++|||+++ +|.+.+.. ..+.+++..++.++.|++.||+|||+++|+|+||||+|||++.++.++|+|||+++.
T Consensus        77 ~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~  155 (266)
T cd05033          77 SRPVMIITEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRR  155 (266)
T ss_pred             CCceEEEEEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence            9999999999985 66655543 445789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ...... ........+++.|+|||.+.+.   .++.++|+||||+++|+|++ |..||......++...+.... ..+.+
T Consensus       156 ~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~  230 (266)
T cd05033         156 LEDSEA-TYTTKGGKIPIRWTAPEAIAYR---KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-RLPPP  230 (266)
T ss_pred             cccccc-ceeccCCCCCccccChhhhccC---CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCCC
Confidence            642111 1111123456789999998643   57889999999999999998 999998888877777775443 33456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++..+.+++.+||+.+|++||++.++++.|..
T Consensus       231 ~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         231 MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            7889999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.8e-38  Score=349.34  Aligned_cols=250  Identities=24%  Similarity=0.288  Sum_probs=198.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ....+|++.+.||+|+||.||+|.+..++      +.||||++.......     .++. .+++.++|+||+++++++..
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~------~~vAiK~i~~~~~~~-----~~Ei-~il~~l~h~niv~l~~~~~~  130 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTS------EKVAIKKVLQDPQYK-----NREL-LIMKNLNHINIIFLKDYYYT  130 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCC------CEEEEEEEecCcchH-----HHHH-HHHHhcCCCCCcceeeeEee
Confidence            34568999999999999999999976555      479999886433211     1222 35667799999999988753


Q ss_pred             C--------CEEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cE
Q 007046          118 N--------GKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RA  186 (620)
Q Consensus       118 ~--------~~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~v  186 (620)
                      .        ..+++||||+++++.+.+...  ....+++..++.++.||+.||+|||+++|+||||||+|||++.++ .+
T Consensus       131 ~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~v  210 (440)
T PTZ00036        131 ECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTL  210 (440)
T ss_pred             cccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCce
Confidence            2        257899999999988877543  346799999999999999999999999999999999999999765 69


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~  266 (620)
                      ||+|||+++.+...    .......||+.|||||++.+.  ..++.++|||||||++|||++|.+||.+.+..+.+..+.
T Consensus       211 kL~DFGla~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~  284 (440)
T PTZ00036        211 KLCDFGSAKNLLAG----QRSVSYICSRFYRAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRII  284 (440)
T ss_pred             eeeccccchhccCC----CCcccCCCCcCccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999999876421    222345789999999998642  258899999999999999999999999887665554443


Q ss_pred             hccCC---------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 RRQEI---------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~---------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....                           ..+|...++++.+||.+||.+||.+||++.++++
T Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        285 QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            32111                           1134467899999999999999999999999997

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.8e-38  Score=352.72  Aligned_cols=256  Identities=18%  Similarity=0.284  Sum_probs=207.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ....++|++.+.||+|+||.||+|.+..++      +.||||++.......  ...+..+.  ..+...+|+||+++++.
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~Ei--~~l~~~~h~~iv~~~~~   99 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDG------EPFAVKVVDMEGMSEADKNRAQAEV--CCLLNCDFFSIVKCHED   99 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCC------CEEEEEEEecccCCHHHHHHHHHHH--HHHhcCCCCcEEEeecc
Confidence            345679999999999999999999976655      489999997654322  22222222  24556789999999887


Q ss_pred             EEECC--------EEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC
Q 007046          115 SVING--------KICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       115 ~~~~~--------~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~  183 (620)
                      +...+        .+++||||++ |+|.+.+...  ....+++..+..++.|++.||.|||+.+|+||||||+|||++.+
T Consensus       100 ~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~  179 (496)
T PTZ00283        100 FAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN  179 (496)
T ss_pred             eecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC
Confidence            75432        3789999998 6777776532  23578999999999999999999999999999999999999999


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      +.+||+|||+++.+.... ........+||+.|||||++.+.   .++.++|||||||++|||++|+.||.+.+..+++.
T Consensus       180 ~~vkL~DFGls~~~~~~~-~~~~~~~~~Gt~~Y~aPE~~~~~---~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~  255 (496)
T PTZ00283        180 GLVKLGDFGFSKMYAATV-SDDVGRTFCGTPYYVAPEIWRRK---PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH  255 (496)
T ss_pred             CCEEEEecccCeeccccc-cccccccccCCcceeCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            999999999998764321 12223456899999999999643   68899999999999999999999999988888887


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..... ..++..+++++.+++.+||..||.+||++.++++
T Consensus       256 ~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        256 KTLAGRY-DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             HHhcCCC-CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            7765443 4467889999999999999999999999999987

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=3.1e-38  Score=326.46  Aligned_cols=272  Identities=19%  Similarity=0.283  Sum_probs=217.1

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ++...++.++|++.+.||+|+||.||+|.+....+ ......+|+|.++.............+...+.++.+|+||++++
T Consensus         4 ~~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~   82 (293)
T cd05053           4 DPEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDN-PNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL   82 (293)
T ss_pred             CcccccCHhHeEEeeEecccccccEEEEEEecCCC-CCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            34667888999999999999999999999875542 23456899999976543332222223333444444899999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~--------------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      +++..++.+|++|||++ |+|.+++...              ....+++..++.++.||+.||.|||+.+|+||||||+|
T Consensus        83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N  162 (293)
T cd05053          83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN  162 (293)
T ss_pred             EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence            99999999999999998 5676666431              23568899999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      ||++.++.+||+|||+++.+..... ........+++.|+|||.+.+.   .++.++|+|||||++|||++ |..||.+.
T Consensus       163 il~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~  238 (293)
T cd05053         163 VLVTEDHVMKIADFGLARDIHHIDY-YRKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGI  238 (293)
T ss_pred             EEEcCCCeEEeCccccccccccccc-eeccCCCCCCccccCHHHhccC---CcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence            9999999999999999987643211 1111223456789999998543   57889999999999999998 99999998


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+.++.+... .....+..++.++.+|+.+||..||++||++.++++.|...
T Consensus       239 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         239 PVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             CHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            888887766544 34456778899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=3e-38  Score=337.70  Aligned_cols=248  Identities=20%  Similarity=0.243  Sum_probs=195.6

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      -.++|++.+.||+|+||.||+|.+..++      ..||+|++......  ....+..+.  .+++.++|+||+++++++.
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~niv~~~~~~~   90 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLG------INVAVKKLSRPFQNQTHAKRAYREL--VLLKCVNHKNIISLLNVFT   90 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCC------ceeEEEEecccccchhHHHHHHHHH--HHHHhCCCCCEeeeeeeec
Confidence            4588999999999999999999976655      47999999754322  222222222  3567789999999999986


Q ss_pred             ECC------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          117 ING------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ~~~------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ..+      .+|+||||+++++.+.+.    ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~D  166 (359)
T cd07876          91 PQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD  166 (359)
T ss_pred             cCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEec
Confidence            543      579999999998877663    3588999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+.+..+.....
T Consensus       167 fg~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  239 (359)
T cd07876         167 FGLARTACT----NFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG  239 (359)
T ss_pred             CCCcccccc----CccCCCCcccCCCCCchhccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            999976432    2223445789999999998654   688899999999999999999999987765443322221110


Q ss_pred             C--------------------CC--------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 I--------------------PP--------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~--------------------~~--------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .                    +.                    .....++++++||.+||..||++||++.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         240 TPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             CCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            0                    00                    11224678999999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=3.3e-38  Score=320.46  Aligned_cols=257  Identities=23%  Similarity=0.399  Sum_probs=210.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|..++|++.++||+|+||.||+|.+...       ..||+|.+...... ...+..+.  .+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~-------~~v~iK~~~~~~~~-~~~~~~e~--~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYYNNS-------TKVAVKTLKPGTMS-VQAFLEEA--NLMKTLQHDKLVRLYAVVT   71 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEecCC-------ceEEEEEccCCchh-HHHHHHHH--HHHHhCCCCCeeeEEEEEc
Confidence            57889999999999999999999986432       36999998754432 22333322  3556679999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..+++|||++ |+|.+.+.......+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||+++
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  151 (261)
T cd05072          72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR  151 (261)
T ss_pred             CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccce
Confidence            9999999999998 577777765556778999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .......  .......++..|+|||++.+   +.++.++|+|||||++|+|++ |..||......+....+.... ..+.
T Consensus       152 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~  225 (261)
T cd05072         152 VIEDNEY--TAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-RMPR  225 (261)
T ss_pred             ecCCCce--eccCCCccceecCCHHHhcc---CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCC
Confidence            7643211  11223346778999999864   357889999999999999998 999999888877777765443 3344


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||..+|++||+++++.+.|+.
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            56789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.8e-38  Score=327.00  Aligned_cols=251  Identities=18%  Similarity=0.264  Sum_probs=197.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHH-HHHHccCCCceeEeEEEEEE-
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLND-LFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~-~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      +|++.+.||+|+||.||+|++..++      +.||+|.++......  ......+... ..+...+|+||+++++++.. 
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~   74 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSG------HFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS   74 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCC------cEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence            5899999999999999999987655      489999987532211  1111122211 12234589999999998864 


Q ss_pred             ----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          118 ----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       118 ----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                          ...++++|||+++++.+.+.......+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+
T Consensus        75 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863          75 RTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             cCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCc
Confidence                3458999999999988888765556699999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-  272 (620)
                      ++....    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|.+||.+....+.+..+......+ 
T Consensus       155 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~  227 (288)
T cd07863         155 ARIYSC----QMALTPVVVTLWYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP  227 (288)
T ss_pred             cccccC----cccCCCccccccccCchHhhCC---CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCC
Confidence            986632    1222345789999999998643   68889999999999999999999998877666555543311000 


Q ss_pred             ------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              .....++.++.++|.+||++||++||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                    012357888999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.3e-38  Score=327.48  Aligned_cols=265  Identities=20%  Similarity=0.356  Sum_probs=212.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.++||+|+||.||+|.+..+.. ....+.||||+++............++. .++..++|+||+++++++..
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~~~~l~h~~iv~~~~~~~~   79 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAP-GEQTQAVAIKTLKDKAEGPLREEFKHEA-MMRSRLQHPNIVCLLGVVTK   79 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCC-CCceeEEEEEEccCCCCHHHHHHHHHHH-HHHhcCCCCCcCeEEEEEcC
Confidence            566789999999999999999998865432 2345689999998655433333333332 35667889999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~--------------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      .+..++++||+. +++.+.+...              ....+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            999999999998 4555555321              1235788899999999999999999999999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  261 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei  261 (620)
                      ++.+||+|||+++....... ........+++.|+|||++.+   +.++.++|+|||||++|||++ |..||.+....++
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  235 (283)
T cd05091         160 KLNVKISDLGLFREVYAADY-YKLMGNSLLPIRWMSPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV  235 (283)
T ss_pred             CCceEecccccccccccchh-eeeccCccCCccccCHHHHhc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            99999999999886533211 111233456789999999853   358889999999999999998 8999999888888


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+.+.... ....+..++..+.+++.+||+.+|++||++.+|+..|+.
T Consensus       236 ~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         236 IEMIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            88776554 344678899999999999999999999999999997753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.3e-38  Score=319.00  Aligned_cols=253  Identities=21%  Similarity=0.327  Sum_probs=205.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++++|++.++||+|+||.||+|.++..       ..+|+|.+...... ...+..+.  .+++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~-------~~~a~K~~~~~~~~-~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   70 (256)
T cd05114           1 INPSELTFMKELGSGQFGVVHLGKWRAQ-------IKVAIKAINEGAMS-EEDFIEEA--KVMMKLSHPKLVQLYGVCTQ   70 (256)
T ss_pred             CCHHHcEEeeEecCCcCceEEEEEeccC-------ceEEEEecccCCcc-HHHHHHHH--HHHHHCCCCCceeEEEEEcc
Confidence            5678899999999999999999986533       36999998754332 22333322  35666789999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|+||||++ |+|.+.+.. ..+.+++..++.++.|++.||+|||+++|+||||||+||+++.++.++|+|||+++.
T Consensus        71 ~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~  149 (256)
T cd05114          71 QKPLYIVTEFMENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRY  149 (256)
T ss_pred             CCCEEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccc
Confidence            999999999998 566666543 345789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......  .......++..|+|||++.+.   .++.++|+||||+++|+|++ |+.||...+..+....+.... .+..+
T Consensus       150 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~  223 (256)
T cd05114         150 VLDDEY--TSSSGAKFPVKWSPPEVFNFS---KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRP  223 (256)
T ss_pred             cCCCce--eccCCCCCchhhCChhhcccC---ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCC
Confidence            532211  111223456789999998643   57889999999999999999 999999988888888776543 33456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ...+.++.+++.+||..+|++||++.++++.|
T Consensus       224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         224 KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            67889999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=6.7e-38  Score=327.20  Aligned_cols=270  Identities=20%  Similarity=0.305  Sum_probs=213.2

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      +.++..++|.+.+.||+|+||.||+|.+...... ......||+|.++...... ...+.. +...+..+.+|+||++++
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-e~~~l~~l~~h~~i~~~~   90 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHKNIINLL   90 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHH-HHHHHHHhcCCCCEeeEE
Confidence            5567778999999999999999999987643321 2234679999998653322 222333 333444445899999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      +++...+..|+||||++ |+|.+++...+              ...+++.+++.++.||+.||+|||++|++||||||+|
T Consensus        91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  170 (307)
T cd05098          91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN  170 (307)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence            99999999999999998 57777775422              1357889999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      ||++.++.++|+|||+++........ .......+++.|||||++.+.   .++.++|+|||||++|||++ |..||.+.
T Consensus       171 ill~~~~~~kL~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~~~g~~p~~~~  246 (307)
T cd05098         171 VLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDR---IYTHQSDVWSFGVLLWEIFTLGGSPYPGV  246 (307)
T ss_pred             eEEcCCCcEEECCCcccccccccchh-hccccCCCccceeChHHhccC---CCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            99999999999999998765321111 111122356789999998643   57889999999999999998 89999888


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..++...+... .....+..++.++.+++.+||..+|++||++.++++.|...
T Consensus       247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~  299 (307)
T cd05098         247 PVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  299 (307)
T ss_pred             CHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            887777766543 34456778999999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.7e-38  Score=330.70  Aligned_cols=263  Identities=19%  Similarity=0.333  Sum_probs=209.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .+...+|++.+.||+|+||.||+|++..+++  .....||+|+++....... ..+..+.  .+++.++|+||+++++++
T Consensus         3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~--~~l~~l~h~niv~~~g~~   78 (316)
T cd05108           3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIKELREATSPKANKEILDEA--YVMASVDNPHVCRLLGIC   78 (316)
T ss_pred             ccchhhceeeeeeecCCCceEEEEEEecCCC--ccceeEEEEeccccCCHHHHHHHHHHH--HHHHhCCCCCCCeEEEEE
Confidence            4677899999999999999999999865543  1234599999975443322 2333222  356778999999999998


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ... ..++++||++ |++.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        79 ~~~-~~~~v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          79 LTS-TVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             cCC-CceeeeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccc
Confidence            764 5789999998 677777754 3456889999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +.+..... ........++..|||||++.+   ..++.++|+||||+++|||++ |..||.+....++...+. .....+
T Consensus       157 ~~~~~~~~-~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~  231 (316)
T cd05108         157 KLLGADEK-EYHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLP  231 (316)
T ss_pred             ccccCCCc-ceeccCCccceeecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-CCCCCC
Confidence            87643211 111122345778999999864   368899999999999999998 999999888777655443 444445


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..++.++.+++.+||..||++||++.+++..|...
T Consensus       232 ~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         232 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            5778899999999999999999999999999977664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-38  Score=321.68  Aligned_cols=265  Identities=21%  Similarity=0.332  Sum_probs=213.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..++|++.+.||+|+||.||+|.++.... ......||+|.+.............++. .+++..+|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~   79 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVK-GEPETRVAIKTVNENASMRERIEFLNEA-SVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCC-CCcceeEEEEecCCccCHHHHHHHHHHH-HHHHhCCCCceeEEEEEEc
Confidence            4678899999999999999999999875542 2345689999987554322222222222 2456678999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~--------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      .....|+||||++ |+|.+.+....        ...+++..++.++.||+.||.|||+.+++||||||+|||++.++.+|
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence            9999999999998 67777765322        23468889999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~  266 (620)
                      |+|||+++....... ........+|..|+|||.+.+   +.++.++|+|||||++||+++ |..||.+.+..+..+.+.
T Consensus       160 l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  235 (277)
T cd05032         160 IGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI  235 (277)
T ss_pred             ECCcccchhhccCcc-cccCCCCCccccccCHHHHhc---CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence            999999886543221 112233467889999999863   357889999999999999998 999999888888777766


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                       ....+..|..++.++.+++.+||+.+|++||++.++++.|+
T Consensus       236 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         236 -DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             -cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence             33455677889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=6.6e-38  Score=322.63  Aligned_cols=264  Identities=22%  Similarity=0.398  Sum_probs=210.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++.++|++.++||+|+||.||+|.+..++.  ..+..||+|.+..............+. .+++.++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~   78 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGM--DHAQLVAIKTLKDINNPQQWGEFQQEA-SLMAELHHPNIVCLLGVVTQ   78 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCC--CCcceEEEEeccCCCCHHHHHHHHHHH-HHHhhCCCCCeeeEEEEEec
Confidence            456789999999999999999998754432  345689999997544333222222222 35667799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLK---------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~---------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      .+..|+||||++ |+|.+++....               ...+++..++.++.||+.||+|||+++++||||||+|||++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~  158 (283)
T cd05090          79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG  158 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence            999999999998 56766664211               13478889999999999999999999999999999999999


Q ss_pred             cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 007046          182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  260 (620)
Q Consensus       182 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~e  260 (620)
                      .++.+||+|||+++....... ........++..|+|||++.+   +.++.++|+||||+++|||++ |..||.+....+
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~  234 (283)
T cd05090         159 EQLHVKISDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMY---GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE  234 (283)
T ss_pred             CCCcEEeccccccccccCCcc-eecccCCCccceecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999987643211 112234456788999999864   368889999999999999998 999999888777


Q ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       261 i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +.+.+.... .+..+..+++++.+++.+||+.||++||++.+|++.|..
T Consensus       235 ~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         235 VIEMVRKRQ-LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            777665443 445678899999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=8.2e-38  Score=318.79  Aligned_cols=265  Identities=22%  Similarity=0.313  Sum_probs=210.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|.+++|+..+.||+|+||.||+|.+..++.   ....+|+|.++.............+. .++...+|+||+++++++.
T Consensus         1 ~i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~   76 (268)
T cd05063           1 EIHPSHITKQKVIGAGEFGEVFRGILKMPGR---KEVAVAIKTLKPGYTEKQRQDFLSEA-SIMGQFSHHNIIRLEGVVT   76 (268)
T ss_pred             CCChHHceEeeEecCCCCccEEEEEEecCCC---CceEEEEEeccccCCHHHHHHHHHHH-HHHhcCCCCCeeEEEEEEc
Confidence            4677899999999999999999999865432   23479999997654333222222222 3556678999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..+..|+||||++++.++.+.....+.+++..+..++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++..
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  156 (268)
T cd05063          77 KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRV  156 (268)
T ss_pred             cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCcccee
Confidence            99999999999996444444333457789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ................++.|+|||++...   .++.++|+|||||++|||++ |..||...+..++...+... ...+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~  232 (268)
T cd05063         157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYR---KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAP  232 (268)
T ss_pred             cccccccceeccCCCcCceecCHHHhhcC---CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCC
Confidence            64322111111122345679999998643   57889999999999999998 99999888887777777544 334456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++.++.+++.+||..+|++||++.++++.|.+
T Consensus       233 ~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         233 MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            6789999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=7.6e-38  Score=321.21  Aligned_cols=264  Identities=20%  Similarity=0.332  Sum_probs=208.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .+..++|++.++||+|+||.||+|.+.....+ ..+..||+|+++....... ..+..+.  .+++.++|+||+++++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~-~~~~~~aik~~~~~~~~~~~~~~~~e~--~~l~~l~~~~iv~~~~~~   78 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKD-EPETRVAIKTVNEAASMRERIEFLNEA--SVMKEFNCHHVVRLLGVV   78 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCC-CceeEEEEEeccccCCHHHHHHHHHHH--HHHHhCCCCCeeeEEEEE
Confidence            35667899999999999999999987643321 2346799999865433222 2222222  356667999999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~--------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      ..+...++||||++ |+|.+.+....        ...+++..+..++.|++.||.|||+.+++|+||||+|||+++++.+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~  158 (277)
T cd05062          79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  158 (277)
T ss_pred             cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCE
Confidence            98899999999999 56666654322        1235778889999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i  265 (620)
                      +|+|||+++........ .......+++.|||||++.+   +.++.++|+|||||++|||++ |..||.+.+..+....+
T Consensus       159 ~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (277)
T cd05062         159 KIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV  234 (277)
T ss_pred             EECCCCCccccCCccee-ecCCCCccCHhhcChhHhhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999998765322111 11122356788999999864   368889999999999999999 78999988887777766


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ... ..+..+..++..+.+++.+||+.||++||++.++++.|+
T Consensus       235 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         235 MEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            543 344567789999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.6e-38  Score=324.43  Aligned_cols=256  Identities=27%  Similarity=0.428  Sum_probs=202.6

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      +.+.+.||.|.||.||+|.++.  .....+..|+||.++...... ...+.++..  .++.++|+||++++|++...+..
T Consensus         1 ~~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~--~l~~l~h~ni~~~~g~~~~~~~~   76 (259)
T PF07714_consen    1 IKLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQ--ILRKLRHPNIVKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTTSSHHHHHHHHHHHH--HHHTHSBTTBE-EEEEEESSSSE
T ss_pred             CEEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccccccccceeeeeccc--ccccccccccccccccccccccc
Confidence            3578999999999999999984  223456789999997654433 344444332  44455999999999999987889


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      ++||||++ |+|.+.+.......+++..+..++.||+.||.|||+++++|+||+++|||++.++.+||+|||+++.....
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~  156 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK  156 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999998 67888877644678999999999999999999999999999999999999999999999999999876221


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                      .. ........+...|+|||.+...   .++.++||||||+++||+++ |+.||...+..++...+.+. .....+..++
T Consensus       157 ~~-~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (259)
T PF07714_consen  157 SK-YKNDSSQQLPLRYLAPEVLKDG---EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-QRLPIPDNCP  231 (259)
T ss_dssp             SS-EEESTTSESGGGGS-HHHHHHS---EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-EETTSBTTSB
T ss_pred             cc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc-ccceeccchh
Confidence            11 1112233467789999998644   48899999999999999999 78999999998888888544 4455788899


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ..+.++|.+||+.||++||++.+|++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999999865

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=9.1e-38  Score=326.11  Aligned_cols=271  Identities=22%  Similarity=0.341  Sum_probs=213.6

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|.+.+.||+|+||.||+|.+..... ......||+|+++.............+...+.++.+|+||+++++
T Consensus        28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  106 (302)
T cd05055          28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSK-SDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLG  106 (302)
T ss_pred             ccccccHHHeEEcceeeccCCeeEEEEEEecCCC-CCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence            4566888899999999999999999998753321 234568999999765433333333333334444448999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++...+..|++|||++ |+|.+.+.......+++.++..++.||+.||+|||+++|+|+||||+|||++.++.++|+|||
T Consensus       107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg  186 (302)
T cd05055         107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG  186 (302)
T ss_pred             EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc
Confidence            9999999999999998 567776654334458999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++.+...... .......+++.|+|||++.+.   .++.++|+|||||++|||++ |..||......+.+.........
T Consensus       187 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~  262 (302)
T cd05055         187 LARDIMNDSNY-VVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR  262 (302)
T ss_pred             ccccccCCCce-eecCCCCcccccCCHhhhccC---CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCc
Confidence            99866432110 111223567889999998643   57889999999999999998 99999887766555444444444


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+...++++.+++.+||..+|++||++.++++.|.+
T Consensus       263 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         263 MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            45566789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=6.7e-38  Score=332.09  Aligned_cols=252  Identities=23%  Similarity=0.311  Sum_probs=198.7

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|..++|++.++||+|+||.||+|.+..++      ..+|+|.++.............+. .+++.++|+||++++++|.
T Consensus         1 ~l~~~~y~~~~~lg~g~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~   73 (333)
T cd06650           1 ELKDDDFEKISELGAGNGGVVFKVSHKPSG------LIMARKLIHLEIKPAIRNQIIREL-QVLHECNSPYIVGFYGAFY   73 (333)
T ss_pred             CcchhhhheeccccCCCCEEEEEEEECCCC------cEEEEEEeecccCHHHHHHHHHHH-HHHHHCCCCcccceeEEEE
Confidence            366789999999999999999999987655      479999987654333222222332 2456678999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .++.+|+||||++| +|.+++.  ..+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~  151 (333)
T cd06650          74 SDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  151 (333)
T ss_pred             ECCEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence            99999999999985 6666664  345789999999999999999999985 7999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV--------  266 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~--------  266 (620)
                      ..+..     .......||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||......++...+.        
T Consensus       152 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (333)
T cd06650         152 GQLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPA  223 (333)
T ss_pred             hhhhh-----hccccCCCCccccCHHHhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcc
Confidence            76532     122345799999999998643   58889999999999999999999997654433321110        


Q ss_pred             -----------------------------------hccCCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 -----------------------------------RRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 -----------------------------------~~~~~~~~p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                         .....+..+ ..++.++++|+.+||++||++||++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         224 ESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             ccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                               011111122 246789999999999999999999999987

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-39  Score=349.53  Aligned_cols=246  Identities=27%  Similarity=0.385  Sum_probs=208.2

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEec
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKF  127 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~  127 (620)
                      .||+|.||+||.|++..+.      ..+|||.+........+-..+++  .+.+.+.|.|||+++|.+..++++-|.||-
T Consensus       582 VLGKGTYG~VYA~RD~~tq------vrIaIKEIpekdsr~~QPLhEEI--aLH~~LrHkNIVrYLGs~senGf~kIFMEq  653 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQ------VRIAIKEIPEKDSREVQPLHEEI--ALHSTLRHKNIVRYLGSVSENGFFKIFMEQ  653 (1226)
T ss_pred             EeecCceeEEEeeccccce------eEEEeeecccccchhhccHHHHH--HHHHHHhhHhHHHHhhccCCCCeEEEEeec
Confidence            6999999999999977665      47999999765544444443333  367778999999999999999999999999


Q ss_pred             CCCChHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcccccCCCCCC
Q 007046          128 YEGSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       128 ~~GsLld~l~~~~~~~l--~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ++|+++.-+.+.+=+++  .+.+.-.|.+||++||.|||++.|+|||||-+|+|++. .|.+||+|||.++.+.+..   
T Consensus       654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin---  730 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN---  730 (1226)
T ss_pred             CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC---
Confidence            99665555555466788  88999999999999999999999999999999999975 6899999999999987643   


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      ....++.||..|||||++....+ .|..++|||||||++.||.||++||... +++..+-++...+..|++|..++.+++
T Consensus       731 P~TETFTGTLQYMAPEvIDqG~R-GYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak  809 (1226)
T KOG4279|consen  731 PCTETFTGTLQYMAPEVIDQGPR-GYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAK  809 (1226)
T ss_pred             ccccccccchhhhChHhhccCCc-CCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHH
Confidence            33456789999999999986644 4999999999999999999999999754 344445556666678899999999999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHH
Q 007046          284 NVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++|.+|+++||.+||++.++|.
T Consensus       810 ~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  810 NFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHcCCCcccCccHHHhcc
Confidence            9999999999999999999997

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=323.75  Aligned_cols=254  Identities=19%  Similarity=0.258  Sum_probs=211.7

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ..+-.++|++.+.||+|+|+.||++.+..++      +.+|+|+++.... ....+.++++. .+.+.++|||||++++.
T Consensus         6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg------~~fa~kiin~~k~~~~~~e~l~rEa-rIC~~LqHP~IvrL~~t   78 (355)
T KOG0033|consen    6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARDFQKLEREA-RICRKLQHPNIVRLHDS   78 (355)
T ss_pred             ccccchhhhHHHHHccCchHHHHHHHhccch------HHHHHHHhhhhhhccccHHHHHHHH-HHHHhcCCCcEeehhhh
Confidence            3455678999999999999999999976665      5799999875432 22233334433 46777899999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEEec
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGD  190 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL~D  190 (620)
                      ....+..|||+|++.| +|...+..  .--+++..+..+++||+++|.|+|.++|+|||+||+|+|+.+.   .-+||+|
T Consensus        79 i~~~~~~ylvFe~m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~  156 (355)
T KOG0033|consen   79 IQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLAD  156 (355)
T ss_pred             hcccceeEEEEecccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecc
Confidence            9999999999999996 44444432  2456889999999999999999999999999999999999643   4689999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+|..+.+    ......+.|||.|||||+++.   .+|+..+|||+.|++||-||.|.+||.+.+...+++.|..+..
T Consensus       157 FGvAi~l~~----g~~~~G~~GtP~fmaPEvvrk---dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y  229 (355)
T KOG0033|consen  157 FGLAIEVND----GEAWHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY  229 (355)
T ss_pred             cceEEEeCC----ccccccccCCCcccCHHHhhc---CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc
Confidence            999998752    344567899999999999974   4899999999999999999999999999999999999987764


Q ss_pred             C--CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 I--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~--~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .  ++..+.+++++++|+++||..||.+|.|+.|.|+
T Consensus       230 d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  230 DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            3  3345789999999999999999999999999987

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=7.6e-38  Score=317.67  Aligned_cols=249  Identities=20%  Similarity=0.279  Sum_probs=198.8

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      +||+|+||.||+|.++...    .+..||+|+++......  ...+..+.  .+++.++|+||+++++++. .+..++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~-~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKK----SEKTVAVKILKNDNNDPALKDELLREA--NVMQQLDNPYIVRMIGICE-AESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCC----CceEEEEEEccCCCCcHHHHHHHHHHH--HHHHhCCCCCcceEEEEEc-CCCcEEEE
Confidence            6899999999999865332    23589999987554322  12222222  3566779999999999875 45689999


Q ss_pred             ecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++ |+|.+.+.  ....+++..+..++.|++.||+|||+++|+||||||.||+++.++.++|+|||+++.........
T Consensus        75 e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          75 ELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             ecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence            9999 45666664  34578999999999999999999999999999999999999999999999999998764322111


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......+++.|+|||.+..   ..++.++|+|||||++|||++ |..||...+..++.+.+... ..+..|..+++++.
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~  228 (257)
T cd05116         153 KAKTHGKWPVKWYAPECMNY---YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG-ERMECPQRCPPEMY  228 (257)
T ss_pred             eecCCCCCCccccCHhHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHH
Confidence            11223345689999999853   367889999999999999998 99999988888887777544 34567888999999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          284 NVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ++|.+||+.||++||++.+|.+.|.+
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhc
Confidence            99999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.5e-38  Score=339.93  Aligned_cols=250  Identities=20%  Similarity=0.282  Sum_probs=196.2

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+...+|++.++||+|+||.||+|.+..++      +.||+|......      ... +. .+++.++||||++++++
T Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~------~~vaiK~~~~~~------~~~-E~-~il~~l~HpnIv~~~~~  151 (391)
T PHA03212         86 RAGIEKAGFSILETFTPGAEGFAFACIDNKTC------EHVVIKAGQRGG------TAT-EA-HILRAINHPSIIQLKGT  151 (391)
T ss_pred             hcccccCCcEEEEEEcCCCCeEEEEEEECCCC------CEEEEechhhhh------hHH-HH-HHHHhCCCCCCCCEeEE
Confidence            34467789999999999999999999987665      479999764221      122 22 35677799999999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +..+...|+|||++.+++.+.+..  ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       152 ~~~~~~~~lv~e~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a  229 (391)
T PHA03212        152 FTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAA  229 (391)
T ss_pred             EEECCeeEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence            999999999999999988888753  457899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHh
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------VDEIYDAVVR  267 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-------~~ei~~~i~~  267 (620)
                      +.....  .........||+.|+|||++.+.   .++.++|+|||||++|||++|..||....       ....+..+..
T Consensus       230 ~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~  304 (391)
T PHA03212        230 CFPVDI--NANKYYGWAGTIATNAPELLARD---PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR  304 (391)
T ss_pred             cccccc--cccccccccCccCCCChhhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH
Confidence            754321  11223456899999999998643   68899999999999999999998875321       1111111111


Q ss_pred             cc--------------------------C-CCC-CC-----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQ--------------------------E-IPP-IP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~--------------------------~-~~~-~p-----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..                          . .+. .+     ..++.++.+||.+||+.||.+||+++|+++
T Consensus       305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        305 RSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00                          0 000 00     135678999999999999999999999997

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.4e-38  Score=318.09  Aligned_cols=258  Identities=21%  Similarity=0.377  Sum_probs=211.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|...+|.+.++||+|+||.||+|.+..++      ..||+|.+..... ....+..+.  .+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~~~K~~~~~~~-~~~~~~~e~--~~l~~l~h~~i~~~~~~~~   72 (263)
T cd05052           2 EMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTM-EVEEFLKEA--AVMKEIKHPNLVQLLGVCT   72 (263)
T ss_pred             CCchHHeEEeeecCCcccceEEEEEEecCC------ceEEEEEecCCch-HHHHHHHHH--HHHHhCCCCChhheEEEEc
Confidence            467788999999999999999999986554      4799999875432 223333332  2455678999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++.++++|||++ ++|.+.+.......+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||+++
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~  152 (263)
T cd05052          73 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR  152 (263)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence            9999999999998 567777654444578999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .......  .......+++.|+|||.+.+.   .++.++|+|||||++|||++ |..||.+.+..+....+... ..+..
T Consensus       153 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~  226 (263)
T cd05052         153 LMTGDTY--TAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRMER  226 (263)
T ss_pred             cccccee--eccCCCCCccccCCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCCCC
Confidence            7643211  111123346789999988643   67889999999999999998 99999988887777766543 34566


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||..||++||++.++++.|+.
T Consensus       227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            78899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-37  Score=316.33  Aligned_cols=254  Identities=26%  Similarity=0.380  Sum_probs=206.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--H--HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--M--RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~--~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      +++|++.+.||+|+||.||+|.+..++      +.||+|.++......  .  .....++. ..++..+|+||+++++++
T Consensus         1 ~~~~~~~~~lg~g~~~~vy~~~~~~~~------~~~~lk~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~   73 (263)
T cd06625           1 PTNWRRGKLLGQGAFGRVYLCYDVDTG------RELAVKQVPFDPDSPETKKEVNALECEI-QLLKNLQHERIVQYYGCL   73 (263)
T ss_pred             CCcccccceecCCCceEEEEEEEcCCC------cEEEEEEEeecccchhhHHHHHHHHHHH-HHHHhCCCCCeeeeEEEE
Confidence            467999999999999999999876544      489999987543211  1  11122222 256667999999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..++..|+||||++| ++.+.+.  ....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus        74 ~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~  151 (263)
T cd06625          74 RDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS  151 (263)
T ss_pred             ccCCeEEEEEEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence            999999999999985 6666664  3457899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      +................|+..|+|||.+.+.   .++.++|+||||+++|||++|+.||...+..+....+......+.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  228 (263)
T cd06625         152 KRLQTICSSGTGMKSVTGTPYWMSPEVISGE---GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQL  228 (263)
T ss_pred             eeccccccccccccCCCcCccccCcceeccC---CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCC
Confidence            7654322112222345688999999999754   4788999999999999999999999887766665556555556677


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..++.++.++|.+||..+|.+||++.++++
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         229 PSHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             CccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            8889999999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.9e-38  Score=337.24  Aligned_cols=254  Identities=22%  Similarity=0.306  Sum_probs=198.7

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .....++|++.++||+|+||.||+|++..++      +.||||++...........+.++. .+++.++|+||+++++++
T Consensus        69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~  141 (353)
T PLN00034         69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTG------RLYALKVIYGNHEDTVRRQICREI-EILRDVNHPNVVKCHDMF  141 (353)
T ss_pred             CCCCHHHHhhhhhccCCCCeEEEEEEECCCC------CEEEEEEEecCCcHHHHHHHHHHH-HHHHhCCCCCcceeeeEe
Confidence            3455688999999999999999999976554      479999997654433333333333 356677899999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..++.+|+||||+.|+.+..     ....++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       142 ~~~~~~~lv~e~~~~~~L~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~  216 (353)
T PLN00034        142 DHNGEIQVLLEFMDGGSLEG-----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSR  216 (353)
T ss_pred             ccCCeEEEEEecCCCCcccc-----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccce
Confidence            99999999999999644321     2345678888999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCC-C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhccC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQE  270 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---ei~~~i~~~~~  270 (620)
                      .+...   ........||+.|+|||++.... . ...+.++|||||||++|||++|+.||......   .....+. ...
T Consensus       217 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~  292 (353)
T PLN00034        217 ILAQT---MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQ  292 (353)
T ss_pred             ecccc---cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccC
Confidence            76321   11223457999999999985321 1 12346899999999999999999999743322   2222222 233


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+..++.++.+||.+||..||++||++.|+++
T Consensus       293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            45567789999999999999999999999999997

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=9e-38  Score=316.16  Aligned_cols=250  Identities=23%  Similarity=0.401  Sum_probs=206.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      +|++.+.||+|+||.||++.+..++      +.||+|.++.............+. .+++.++|+||+++++.+..++.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~   73 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSD------QKYAMKEIRLPKSSSAVEDSRKEA-VLLAKMKHPNIVAFKESFEADGHL   73 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCC------ceEEEEEEEcCcchHHHHHHHHHH-HHHHhCCCCCcceEEEEEEECCEE
Confidence            5899999999999999999976655      479999986543322222222222 356667999999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |++|||++ |++.+.+.......+++..++.++.||+.||.|||+++|+|+||||+||+++.++.++|+|||+++.....
T Consensus        74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence            99999998 57777776545567899999999999999999999999999999999999999999999999998766331


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCH
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                         ........|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+.... ....+..++.
T Consensus       154 ---~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  226 (255)
T cd08219         154 ---GAYACTYVGTPYYVPPEIWENM---PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-YKPLPSHYSY  226 (255)
T ss_pred             ---ccccccccCCccccCHHHHccC---CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-CCCCCcccCH
Confidence               1122345789999999998643   57889999999999999999999999888777776665443 3446778999


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.+++.+||+.||++||++.+++.
T Consensus       227 ~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         227 ELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             HHHHHHHHHHhCCcccCCCHHHHhh
Confidence            9999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=6e-38  Score=322.02  Aligned_cols=253  Identities=23%  Similarity=0.381  Sum_probs=202.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||||.++..... .......+ ....++..+|+||+++++++..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~iv~~~~~~~~~~   73 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTG------TIMAVKRIRATVNSQEQKRLLMD-LDISMRSVDCPYTVTFYGALFREG   73 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCC------cEEEEEEEecCCCcHHHHHHHHH-HHHHHHHcCCCCeeeeeEEEecCC
Confidence            47999999999999999999987665      48999999765432 22223332 234567789999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..|++|||++|++.+.+...  ....+++..++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus        74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~  153 (283)
T cd06617          74 DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGY  153 (283)
T ss_pred             cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            99999999999888877543  235789999999999999999999997 999999999999999999999999999886


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~~~  274 (620)
                      ....    .......|+..|+|||.+.+... ..++.++|+|||||++|+|++|+.||.... ..+.+..+... ..+.+
T Consensus       154 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~  228 (283)
T cd06617         154 LVDS----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-PSPQL  228 (283)
T ss_pred             cccc----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc-CCCCC
Confidence            5321    12233568999999999865322 457889999999999999999999997532 22333333332 22333


Q ss_pred             C-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 P-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      + ..+|.++.++|.+||..+|++||++.++++
T Consensus       229 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         229 PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            3 468999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=4.7e-38  Score=328.20  Aligned_cols=262  Identities=19%  Similarity=0.268  Sum_probs=207.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ++|..++|++.+.||+|+||.||+|.+..++..    ..+|+|.++............++...+.+..+|+||+++++++
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~----~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~   77 (303)
T cd05088           2 PVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLR----MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   77 (303)
T ss_pred             CccchhhceeeeeecCCCCceEEEEEEccCCce----eeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence            578889999999999999999999998655421    3578888765433322222333333445555899999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL  180 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl  180 (620)
                      ..++.+|+||||++ |+|.+++....              ...+++..++.++.||+.||+|||++|++||||||+|||+
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili  157 (303)
T cd05088          78 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV  157 (303)
T ss_pred             CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence            99999999999998 57777665321              1357899999999999999999999999999999999999


Q ss_pred             ccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHH
Q 007046          181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD  259 (620)
Q Consensus       181 d~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~  259 (620)
                      +.++.+||+|||+++....    ........++..|+|||++.+.   .++.++|+|||||++|||+| |..||.+.+..
T Consensus       158 ~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  230 (303)
T cd05088         158 GENYVAKIADFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA  230 (303)
T ss_pred             cCCCcEEeCccccCcccch----hhhcccCCCcccccCHHHHhcc---CCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence            9999999999999864321    0111122346789999998643   57889999999999999998 99999988887


Q ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..+.+... .....+..+++++.+++.+||+.+|++||++.+++..|..
T Consensus       231 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         231 ELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             HHHHHHhcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            777666432 3344566789999999999999999999999999987765

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-38  Score=362.05  Aligned_cols=268  Identities=22%  Similarity=0.326  Sum_probs=224.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -+.++.++..+...||+|.||.||.|.......+.. ...||||.+++.........+-++. ++++..+|||||+++|+
T Consensus       686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~~~~~~~~~Fl~Ea-~~m~~f~HpNiv~liGv  763 (1025)
T KOG1095|consen  686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRLSSEQEVSDFLKEA-LLMSKFDHPNIVSLIGV  763 (1025)
T ss_pred             cccCChhheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEeccccCCHHHHHHHHHHH-HHHhcCCCcceeeEEEe
Confidence            355779999999999999999999999876654333 5679999998866544333333332 57888999999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~-----~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      |.+....+|++|||+ |+|+.++.+.+     ...++..+.+.++.|||.|+.||+++++|||||..+|+||+....+||
T Consensus       764 ~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKI  843 (1025)
T KOG1095|consen  764 CLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKI  843 (1025)
T ss_pred             ecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEE
Confidence            999999999999999 67877776531     456899999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|||+|+-+.+.+.....- ...-...|||||.+.   ++.++.++|||||||++||++| |..||.+.+..+++..+..
T Consensus       844 aDFGlArDiy~~~yyr~~~-~a~lPvkWm~PEsl~---d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~  919 (1025)
T KOG1095|consen  844 ADFGLARDIYDKDYYRKHG-EAMLPVKWMPPESLK---DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE  919 (1025)
T ss_pred             cccchhHhhhhchheeccC-ccccceecCCHHHHh---hcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh
Confidence            9999999554322211111 123346899999996   4679999999999999999999 9999999999999987776


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +. +.+.|..||..+.++|.+||+.+|++||++..|++.+..
T Consensus       920 gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  920 GG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             CC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence            66 666799999999999999999999999999999985554

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.8e-38  Score=324.47  Aligned_cols=261  Identities=21%  Similarity=0.298  Sum_probs=196.2

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      ||+|+||.||++.+..++      +.||+|.+.......  .......+ ..+++.++|+||+++++++..+..+|+|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~E-~~il~~l~hp~i~~~~~~~~~~~~~~lv~e   73 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTG------KMYACKKLDKKRLKKKSGEKMALLE-KEILEKVNSPFIVNLAYAFESKTHLCLVMS   73 (277)
T ss_pred             CCCCCceEEEEEEEccCC------cEEEEEEEcHHHhhcchhhHHHHHH-HHHHHhcCCCcEEEEEEEEecCCeEEEEEe
Confidence            799999999999976655      489999996432211  11111112 235666799999999999999999999999


Q ss_pred             cCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++| +|.+.+.......+++..+..++.||+.||+|||+.+|+||||||+||+++.++.++|+|||++......    .
T Consensus        74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~----~  149 (277)
T cd05607          74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG----K  149 (277)
T ss_pred             cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC----c
Confidence            9985 5655655434456899999999999999999999999999999999999999999999999998765321    1


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhccCCCCCCCCCCHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLPPA  281 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~~~~~~~~~p~~~s~~  281 (620)
                      ......||+.|+|||++.+.   .++.++|+|||||++|||++|..||.....    .++......... ......++++
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  225 (277)
T cd05607         150 TITQRAGTNGYMAPEILKEE---PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KFEHQNFTEE  225 (277)
T ss_pred             eeeccCCCCCccCHHHHccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-ccccccCCHH
Confidence            22345799999999998643   588899999999999999999999976432    233333322221 1223468999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHH-----HHHhCCCCCCCCCccCCCC
Q 007046          282 VENVLLGCFEYDLRSRPLMTDILR-----VFKSDGGWTGHGSRILPDK  324 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil~-----~L~~~~~~~~~~~~~~~~~  324 (620)
                      +.+++.+||++||++||+++|+++     .+....+|........++|
T Consensus       226 ~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~  273 (277)
T cd05607         226 SKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPP  273 (277)
T ss_pred             HHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCC
Confidence            999999999999999999965543     3344455554444444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.1e-37  Score=322.42  Aligned_cols=270  Identities=19%  Similarity=0.296  Sum_probs=207.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .|+..+.||+|+||+||+|.+..++      +.||+|.+........  ......+. .+++.++|+||+.+++.+..++
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~-~il~~l~~~~i~~~~~~~~~~~   73 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATG------KMYACKRLEKKRIKKRKGESMALNEK-QILEKVNSQFVVNLAYAYETKD   73 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCC------cEEEEEEeehhhhhhhhHHHHHHHHH-HHHHHcCCcCceeEEEEEecCC
Confidence            4788899999999999999987655      4799999975432211  11222222 3556679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|++|||++| ++.+.+.......+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++....
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          74 ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            99999999995 55555544344579999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--EIPPIPS  276 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~--~~~~~p~  276 (620)
                      .    ........||+.|+|||++.+   ..++.++|+||||+++|+|++|..||...........+....  ....++.
T Consensus       154 ~----~~~~~~~~g~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd05632         154 E----GESIRGRVGTVGYMAPEVLNN---QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSA  226 (285)
T ss_pred             C----CCcccCCCCCcCccChHHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCc
Confidence            2    112234579999999999864   368889999999999999999999998876654433332221  1234567


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKS  325 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~  325 (620)
                      .++.++.+|+.+||..||++||+     +.++++ .+....+|.........+++
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  281 (285)
T cd05632         227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPF  281 (285)
T ss_pred             cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCC
Confidence            78999999999999999999999     778876 34444444444444433333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=5.6e-38  Score=334.85  Aligned_cols=248  Identities=20%  Similarity=0.236  Sum_probs=195.7

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||.+.......  .....++.  .+++.++|+||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~niv~~~~~~~   86 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFT   86 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCC------ceEEEEEeCCcccChHHHHHHHHHH--HHHHHhCCCchhceeeeee
Confidence            3578999999999999999999876554      479999997643222  22222222  3567789999999999886


Q ss_pred             EC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          117 IN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ..      ...|+||||+++++.+.+.    ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~D  162 (355)
T cd07874          87 PQKSLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD  162 (355)
T ss_pred             ccccccccceeEEEhhhhcccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEee
Confidence            53      3579999999998877764    2588999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+.+..+.....
T Consensus       163 fg~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  235 (355)
T cd07874         163 FGLARTAGT----SFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG  235 (355)
T ss_pred             CcccccCCC----ccccCCccccCCccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            999976532    1223446799999999998644   588899999999999999999999988775544333222110


Q ss_pred             CC----------------------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IP----------------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~----------------------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+                                        ..+...+.++++||.+||..||++|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             CCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence            00                                        011224567899999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.1e-37  Score=320.22  Aligned_cols=267  Identities=20%  Similarity=0.335  Sum_probs=211.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +++.++|++.++||+|+||.||+|.++..... .....||+|.++.............+ ..+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e-~~~l~~l~~~~i~~~~~~~~   79 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKG-EAETRVAVKTVNESASLRERIEFLNE-ASVMKGFTCHHVVRLLGVVS   79 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCC-CcceEEEEEECCCcCCHHHHHHHHHH-HHHHHhCCCCCeeeEEEEEc
Confidence            47789999999999999999999987643221 23467999998755432222222222 23567779999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~--------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      ..+..|+||||++ |+|.+.+....        ...++...+..++.||+.||.|||+++|+||||||+|||++.++.++
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence            9999999999998 67777775432        13456778899999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~  266 (620)
                      |+|||+++........ .......++..|+|||.+.+   +.++.++|+|||||++|||++ |..||.+....++.+.+.
T Consensus       160 L~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~---~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  235 (288)
T cd05061         160 IGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM  235 (288)
T ss_pred             ECcCCccccccccccc-cccCCCcccccccCHHHhcc---CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999999865332211 11122346788999999863   368889999999999999999 889999888888777665


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .. ..+..+..+++.+.+++.+||+.||++||++.++++.|++.
T Consensus       236 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         236 DG-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             cC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            43 33445678899999999999999999999999999988774

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-39  Score=327.31  Aligned_cols=258  Identities=21%  Similarity=0.261  Sum_probs=206.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +-.+..|..++.||+|+||.|..|.++.+++      .||||.+...............+..++++++|+||+.+.+++.
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~------~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGE------KVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCC------EeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            3345667778999999999999999888774      7999999754433322221111224778889999999999986


Q ss_pred             E-----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          117 I-----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       117 ~-----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .     -..+|+|+|+|+-+|...+.  .+..++...+..+++||+.||.|+|+.+|+||||||.|+|++.+...||+||
T Consensus        92 p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DF  169 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDF  169 (359)
T ss_pred             cccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccc
Confidence            5     24589999999877666664  3445999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+..... .....++..+-|.+|.|||.+..  ...|+...||||+|||+.||++|++-|.|.+.-+.++.|..--..
T Consensus       170 GLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~--~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGt  246 (359)
T KOG0660|consen  170 GLARYLDKF-FEDGFMTEYVATRWYRAPELLLN--SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGT  246 (359)
T ss_pred             cceeecccc-CcccchhcceeeeeecCHHHHhc--cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCC
Confidence            999987543 33445677889999999999863  347999999999999999999999999987765444444331111


Q ss_pred             ------------------------CCC-----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------------------PPI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------------------~~~-----p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              +..     -.+.++.+.+|+.+||..||.+|+|++|+|.
T Consensus       247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                                    111     1477899999999999999999999999997

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-39  Score=353.32  Aligned_cols=268  Identities=21%  Similarity=0.319  Sum_probs=232.6

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..-.|+++...|.+.||.|.||+|++|+.+..++   ....||||.|+....++.+..+..+. -++-..+||||++|.|
T Consensus       622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgk---re~~VAIKTLK~GytekqrrdFL~EA-sIMGQFdHPNIIrLEG  697 (996)
T KOG0196|consen  622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGK---REITVAIKTLKAGYTEKQRRDFLSEA-SIMGQFDHPNIIRLEG  697 (996)
T ss_pred             hhhhcChhheEEEEEEecccccceecccccCCCC---cceeEEEeeeccCccHHHHhhhhhhh-hhcccCCCCcEEEEEE
Confidence            4567999999999999999999999999987664   44789999999877666554444333 3677889999999999


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.......+||+|||+.+.+|.+.+.+++.|+.-+...+++.|+.|+.||-+++++||||..+|||++.|-.+|++|||+
T Consensus       698 VVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGL  777 (996)
T KOG0196|consen  698 VVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGL  777 (996)
T ss_pred             EEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccc
Confidence            99999999999999996666777777888999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCC--CCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          194 PHLLLGIPLPSSDLPRRLG--TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~G--T~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      +|.+.+.+.  ...++.-|  ..+|.|||.+.   +.+++.++||||||+++||.++ |..||..++.+++++.|.++.+
T Consensus       778 SRvledd~~--~~ytt~GGKIPiRWTAPEAIa---~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR  852 (996)
T KOG0196|consen  778 SRVLEDDPE--AAYTTLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR  852 (996)
T ss_pred             eeecccCCC--ccccccCCccceeecChhHhh---hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC
Confidence            998865442  22222223  47899999996   5589999999999999999888 9999999999999999987776


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .| .|.+||..+.+|++.||++|..+||.+.+|+..|.+.+
T Consensus       853 LP-pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI  892 (996)
T KOG0196|consen  853 LP-PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI  892 (996)
T ss_pred             CC-CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence            65 48899999999999999999999999999999888865

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=7.5e-38  Score=320.75  Aligned_cols=264  Identities=23%  Similarity=0.394  Sum_probs=210.6

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|.+.+.||+|+||.||+|.+..... ....+.||||.++............++.. ++..++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~   79 (280)
T cd05049           2 VQRDTIVLKRELGEGAFGKVFLGECYHLEP-ENDKELVAVKTLKETASNDARKDFEREAE-LLTNFQHENIVKFYGVCTE   79 (280)
T ss_pred             CChHHhhHHhhccccCCceEeeeeeccccC-cCCcceEEEEeecccCCHHHHHHHHHHHH-HHHhcCCCCchheeeEEec
Confidence            456789999999999999999998765421 23446899999976554433333333332 4556789999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLK------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~  184 (620)
                      ....|+||||++ |+|.+.+....            ...+++..+..++.||+.||.|||+++++||||||+||+++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            999999999998 56666654321            24578899999999999999999999999999999999999999


Q ss_pred             cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD  263 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~  263 (620)
                      .++|+|||+++....... ........+++.|+|||++.+   +.++.++|+|||||++|||++ |..||.+.+..+...
T Consensus       160 ~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~  235 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDY-YRVGGHTMLPIRWMPPESIMY---RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE  235 (280)
T ss_pred             eEEECCcccceecccCcc-eecCCCCcccceecChhhhcc---CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999876532111 111223356789999999864   368889999999999999998 999999888888777


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .+.... ....+..++.++.+++.+||..||++||++.|+++.|+
T Consensus       236 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         236 CITQGR-LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHcCC-cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            776443 34456789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.9e-37  Score=322.98  Aligned_cols=271  Identities=18%  Similarity=0.271  Sum_probs=213.5

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCc-CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTE-DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~e-d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      +..+..++|.+.+.||+|+||.||+|++..... .......||+|.+..............+...+..+.+|+||+++++
T Consensus         9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101           9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            456888999999999999999999998654221 1234568999999754433222223333333333348999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      ++...+..|++|||++ |+|.+++....              ...+++..++.++.||+.||.|||++|++||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            9999999999999998 56766665421              23578888999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS  257 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~  257 (620)
                      |++.++.+||+|||+++........ .......+++.|+|||++.+.   .++.++|+||||+++|+|++ |..||.+.+
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~  244 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  244 (304)
T ss_pred             EEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999876332111 112233567889999998643   58889999999999999998 889999988


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..++.+.+... .....+..++.++.+++.+||..+|++||++.++++.|...
T Consensus       245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         245 VEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             HHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence            88888777544 34455778999999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.7e-37  Score=321.38  Aligned_cols=254  Identities=20%  Similarity=0.293  Sum_probs=204.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|+++++||+|+||.||+|.+..++      ..||+|++..........+..+..  .++..+|+||+++++.+..++.
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~~--~l~~l~h~~i~~~~~~~~~~~~   83 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYMVEIE--ILATCNHPYIVKLLGAFYWDGK   83 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCC------ceEEEEEeccCCHHHHHHHHHHHH--HHHhCCCCcEeeeEEEEEeCCe
Confidence            56999999999999999999876655      479999997665444444444332  4566789999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +|+||||++|++++.+.......+++..+..++.||+.+|.|||+.+++||||||+||+++.++.++|+|||++......
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  163 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT  163 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence            99999999976555444334567899999999999999999999999999999999999999999999999998754321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSG  277 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~  277 (620)
                         ........+++.|+|||++.+.  ....++.++|+|||||++|+|++|..||...+..+.+..+..... ....+..
T Consensus       164 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T cd06644         164 ---LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSK  240 (292)
T ss_pred             ---ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcc
Confidence               1222345689999999998532  133578899999999999999999999988776665555543222 1234567


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.++|.+||..||++||++.++++
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         241 WSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            8899999999999999999999999987

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-39  Score=337.58  Aligned_cols=278  Identities=19%  Similarity=0.278  Sum_probs=228.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +..+.|+.-+.||+|+||.||-++.+.|++      .||.|.+.+...... .+-+...+..++...+.+.||.+-..|+
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGK------MYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfe  255 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGK------MYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFE  255 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchh------hHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeec
Confidence            567889999999999999999999877775      799999976443221 1222223334677778899999999999


Q ss_pred             ECCEEEEEEecCCCChHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEGSVGDR-MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~-l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +.+.+|+||..|+|+-+.+ +.+..+..|++..+++|+.+|+.||++||+.+|++|||||+|||+|+.|++.|+|+|||.
T Consensus       256 Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAv  335 (591)
T KOG0986|consen  256 TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAV  335 (591)
T ss_pred             CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEE
Confidence            9999999999999643333 333344689999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhccCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEI  271 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~~~~~~  271 (620)
                      .+..    ......++||.+|||||+++++   .|++..|+|||||++|||+.|+.||.....    +++-+.+..  ..
T Consensus       336 ei~~----g~~~~~rvGT~GYMAPEvl~ne---~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~  406 (591)
T KOG0986|consen  336 EIPE----GKPIRGRVGTVGYMAPEVLQNE---VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DP  406 (591)
T ss_pred             ecCC----CCccccccCcccccCHHHHcCC---cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--ch
Confidence            8753    2344556999999999999865   599999999999999999999999976543    344444432  34


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      ..++..+|+++++|.+.+|++||.+|..     +.++.+ .|++..+|.......+.||+.|...
T Consensus       407 ~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~  471 (591)
T KOG0986|consen  407 EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPG  471 (591)
T ss_pred             hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCcc
Confidence            4578999999999999999999999985     457776 7888999999999999999988744

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=7e-38  Score=336.59  Aligned_cols=250  Identities=21%  Similarity=0.259  Sum_probs=199.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|.+..++      +.||||.+......  ....+..+.  .+++.++|+||+++++++...+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~niv~~~~~~~~~~   72 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDG------KRVALKKMPNVFQNLVSCKRVFREL--KMLCFFKHDNVLSALDILQPPH   72 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCC------CEEEEEeccccccchHHHHHHHHHH--HHHHhCCCCCcCCHhheecCCC
Confidence            4788999999999999999976554      48999998654322  222222222  3566679999999999998776


Q ss_pred             -----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          120 -----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       120 -----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                           ..|+||||+.+++.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a  150 (372)
T cd07853          73 IDPFEEIYVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA  150 (372)
T ss_pred             ccccceEEEEeeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccce
Confidence                 799999999998888775  4567999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC----
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE----  270 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~----  270 (620)
                      +.....  .........+|+.|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+..+.+..+.....    
T Consensus       151 ~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~  226 (372)
T cd07853         151 RVEEPD--ESKHMTQEVVTQYYRAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL  226 (372)
T ss_pred             eecccC--ccccCCCCCcCCCcCCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            865321  11223345789999999998643  2478899999999999999999999998877665554432111    


Q ss_pred             -------------------CC-------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -------------------IP-------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -------------------~~-------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                         .+       ......++++.+||.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                               11       123456889999999999999999999999997

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2e-37  Score=320.42  Aligned_cols=265  Identities=21%  Similarity=0.347  Sum_probs=212.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+..+|.+.+.||+|+||.||++.+.... +......||+|.+..........+..+.  .+++.++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   78 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLC-PEQDKILVAVKTLKDASDNARKDFHREA--ELLTNLQHEHIVKFYGVCVE   78 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCC-CCCcceEEEEEecCCcCHHHHHHHHHHH--HHHHhCCCCCcceEEEEEec
Confidence            67789999999999999999999864422 1223457999999765544333343332  25566789999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLK-----------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR  185 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~-----------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~  185 (620)
                      .+.+|+||||++ ++|.+++....           ...+++..++.++.||+.||+|||++|++||||||+|||++.++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~  158 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  158 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            999999999998 56666664321           135899999999999999999999999999999999999999999


Q ss_pred             EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA  264 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~  264 (620)
                      ++|+|||+++....... ........+++.|+|||++.+.   .++.++|+|||||++|+|++ |..||......+....
T Consensus       159 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~  234 (288)
T cd05093         159 VKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC  234 (288)
T ss_pred             EEeccCCccccccCCce-eecCCCCCccccccCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            99999999876532111 1112234467899999998643   57889999999999999998 9999998888887777


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.... ....+..++.++.+|+.+||+.||.+||++.++++.|+..
T Consensus       235 i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~  279 (288)
T cd05093         235 ITQGR-VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL  279 (288)
T ss_pred             HHcCC-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            76544 3345677899999999999999999999999999887764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=8.7e-38  Score=323.37  Aligned_cols=248  Identities=20%  Similarity=0.334  Sum_probs=197.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .|++.+.||+|+||.||+|.+..++      +.||+|.+........   ..+..+ . .+++.++|++|+.+++.+..+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E-~-~il~~l~~~~i~~~~~~~~~~   72 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGESMALNE-K-QILEKVNSRFVVSLAYAYETK   72 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCC------ceEEEEEEehhhccchHHHHHHHHH-H-HHHHhCCCCCeeeeeEEEecC
Confidence            3788899999999999999987665      4899999875432211   122222 2 356677999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++| +|.+.+.......+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630          73 DALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             CEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence            999999999985 5666665444457999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhccCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQEIPPI  274 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---ei~~~i~~~~~~~~~  274 (620)
                      ..    ........||+.|||||++.+.   .++.++|+||||+++|+|++|..||......   +....+... .....
T Consensus       153 ~~----~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~  224 (285)
T cd05630         153 PE----GQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEEY  224 (285)
T ss_pred             CC----CccccCCCCCccccChHHHcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhhc
Confidence            32    1122345799999999998643   6888999999999999999999999865432   222222211 22345


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~  305 (620)
                      +..+++++.+|+.+||+.||++||+     +.++++
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         225 SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            6778999999999999999999999     889987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.6e-37  Score=317.61  Aligned_cols=265  Identities=19%  Similarity=0.329  Sum_probs=209.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|++..++..  ....||+|+++.............+. ..+...+|+||+++++++.
T Consensus         3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~--~~~~va~K~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~   79 (279)
T cd05109           3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGEN--VKIPVAIKVLRENTSPKANKEILDEA-YVMAGVGSPYVCRLLGICL   79 (279)
T ss_pred             ccchhheeeeeecCCCCCceEEEEEEecCCCc--cceEEEEEEecCCCCHHHHHHHHHHH-HHHHhcCCCCCceEEEEEc
Confidence            36778999999999999999999998765532  23458999997654433332222222 3556678999999999987


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      . ...+++|||++ |++.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        80 ~-~~~~l~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~  157 (279)
T cd05109          80 T-STVQLVTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (279)
T ss_pred             C-CCcEEEEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCcee
Confidence            5 45789999998 677776643 34678999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+..... ........+++.|||||.+.+.   .++.++|+|||||++|||++ |..||.......+...+.. ...+..
T Consensus       158 ~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~  232 (279)
T cd05109         158 LLDIDET-EYHADGGKVPIKWMALESILHR---RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLPQ  232 (279)
T ss_pred             ecccccc-eeecCCCccchhhCCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCC
Confidence            7643211 1111223456789999998643   68889999999999999998 9999988877777665543 334455


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      +..++.++.+++.+||+.||++||++.++++.|....
T Consensus       233 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         233 PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            6789999999999999999999999999999877643

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-38  Score=320.68  Aligned_cols=285  Identities=22%  Similarity=0.326  Sum_probs=235.8

Q ss_pred             cCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCc
Q 007046           30 TSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        30 ~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      .++..+.-+..++|+++..||+|+|++|.+++++.|.      +.||+|+++++..+  ..-...+.+...+.+..+||.
T Consensus       239 ~g~~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~------qiyamkvvkkel~nddedidwvqtek~vfe~asn~pf  312 (593)
T KOG0695|consen  239 DGIKISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------QIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPF  312 (593)
T ss_pred             cccccccccccccceeeeeecCcchhhhhheehcccc------eeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCe
Confidence            3445667799999999999999999999999987776      58999999875321  112233444445677789999


Q ss_pred             eeEeEEEEEECCEEEEEEecCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~-~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      +|-++.+|.++..+++|.||++|  +|++.+. ++.+++++.+..|..+|+.||.|||++|||+||||.+|+|||..|++
T Consensus       313 lvglhscfqtesrlffvieyv~g--gdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghi  390 (593)
T KOG0695|consen  313 LVGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHI  390 (593)
T ss_pred             EEehhhhhcccceEEEEEEEecC--cceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCce
Confidence            99999999999999999999997  3433322 45789999999999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-------CCHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-------RSVD  259 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~-------~~~~  259 (620)
                      ||.|+|+++.-..   +....+++||||.|+|||++.++   .|.+.+|+|+||++++||+.|+.||.-       .+.+
T Consensus       391 kltdygmcke~l~---~gd~tstfcgtpnyiapeilrge---eygfsvdwwalgvlmfemmagrspfdivgm~n~d~nte  464 (593)
T KOG0695|consen  391 KLTDYGMCKEGLG---PGDTTSTFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTE  464 (593)
T ss_pred             eecccchhhcCCC---CCcccccccCCCcccchhhhccc---ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchh
Confidence            9999999986543   34456788999999999999876   688899999999999999999999952       2333


Q ss_pred             -HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCC------HHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          260 -EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL------MTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       260 -ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs------~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                       -+++.|+.++  ..+|..++-.+..+++..|.+||++|..      +.++.. .|++..+|...+.....+|+.|...
T Consensus       465 dylfqvilekq--iriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~  541 (593)
T KOG0695|consen  465 DYLFQVILEKQ--IRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQIT  541 (593)
T ss_pred             HHHHHHHhhhc--ccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccc
Confidence             3555565544  3468889999999999999999999964      567765 7888999999999999999998754

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.1e-37  Score=316.21  Aligned_cols=264  Identities=20%  Similarity=0.300  Sum_probs=208.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.+.||+|+||.||+|.+..+++   ....||||++...........+..+. ..++..+||||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~~   76 (269)
T cd05065           1 IDVSCVKIEEVIGAGEFGEVCRGRLKLPGK---REIFVAIKTLKSGYTEKQRRDFLSEA-SIMGQFDHPNIIHLEGVVTK   76 (269)
T ss_pred             CChHHeEEEeEecCCCCCeEEEEEEecCCC---CceeEEEEEcCCCCCHHHHHHHHHHH-HHHHhCCCcCcceEEEEECC
Confidence            456789999999999999999999876553   23579999997654333222223322 25566799999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +...++||||++|+.++.+.....+.+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++..
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~  156 (269)
T cd05065          77 SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL  156 (269)
T ss_pred             CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence            99999999999964444443334567899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCc--CCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          198 LGIPLPSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       198 ~~~~~~~~~~~~~--~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .............  ..+..|+|||++.+   +.++.++|+|||||++|||++ |..||...+..+....+... ...+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~  232 (269)
T cd05065         157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPP  232 (269)
T ss_pred             ccCccccccccccCCCcceeecCHhHhcc---CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCC
Confidence            4322111111111  12457999999863   368889999999999999987 99999988887777777543 33345


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||+.+|++||++.+++..|..
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         233 PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            67789999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-38  Score=344.19  Aligned_cols=265  Identities=22%  Similarity=0.376  Sum_probs=220.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc---hhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...|..++..+.++||+|+||.||+|..+..+...  ...||||..+.+.   .+...+++.+.  .+++.++|+|||++
T Consensus       151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~--~~~VAvK~~k~~~~~~~~~~~e~m~EA--rvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFK--VVPVAVKTTKGSSELTKEQIKEFMKEA--RVMRQLNHPNVVRF  226 (474)
T ss_pred             ccEEeccCccccceeecccccEEEEEEEEecCCce--eeeeEEEeecccccccHHHHHHHHHHH--HHHHhCCCCCEEEE
Confidence            56688899999999999999999999988654311  1129999998533   33444444443  36677999999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      +|++.....+|||||+|. |+|.+++.. ....++..+.+.++.+.+.||+|||++++|||||..+|+|++.++.+||+|
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISD  305 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISD  305 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCc
Confidence            999999999999999999 577777764 334699999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||+++.-...   ........-...|+|||.+.   .+.|+.++|||||||++||+++ |..||.+....++...|....
T Consensus       306 FGLs~~~~~~---~~~~~~~klPirWLAPEtl~---~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~  379 (474)
T KOG0194|consen  306 FGLSRAGSQY---VMKKFLKKLPIRWLAPETLN---TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG  379 (474)
T ss_pred             cccccCCcce---eeccccccCcceecChhhhc---cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC
Confidence            9998764211   11111112457899999996   4479999999999999999999 899999999999999997777


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+...|...|.++..++.+||..||++||+|.++.+.++..
T Consensus       380 ~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~  420 (474)
T KOG0194|consen  380 YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL  420 (474)
T ss_pred             ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence            77778889999999999999999999999999999877764

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=7.2e-38  Score=319.02  Aligned_cols=255  Identities=22%  Similarity=0.295  Sum_probs=201.3

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..++|++.+.||+|+||.||+|++..++      +.||+|+++.........+..+.  .+++..+|+||+++++++..+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~------~~~aik~~~~~~~~~~~~~~~e~--~~l~~~~h~~ii~~~~~~~~~   78 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTG------ELAAVKIIKLEPGDDFSLIQQEI--FMVKECKHCNIVAYFGSYLSR   78 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCC------eEEEEEEEecCccchHHHHHHHH--HHHHhcCCCCeeeeeEEEEeC
Confidence            3467999999999999999999976554      47999999765433333322222  356677999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||+++ +|.+.+.  ...++++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||+++..
T Consensus        79 ~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  156 (267)
T cd06646          79 EKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI  156 (267)
T ss_pred             CEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceee
Confidence            999999999995 5656554  3467899999999999999999999999999999999999999999999999999866


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC---C
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---I  274 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~---~  274 (620)
                      ...   ........|++.|+|||.+.......++.++|+|||||++|||++|..||......+....+......++   .
T Consensus       157 ~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  233 (267)
T cd06646         157 TAT---IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKD  233 (267)
T ss_pred             ccc---ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcc
Confidence            321   1122345789999999998644345678899999999999999999999976554443322222221211   1


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      +..++.++.++|.+||..+|++||++++|++.
T Consensus       234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            24578999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2.6e-37  Score=311.89  Aligned_cols=249  Identities=24%  Similarity=0.423  Sum_probs=205.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|.+.+.||+|+||.||+|++..++      ..||+|.+.....  .....+..+.  .+++.++|+||+++++++..++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADK------RVYAMKQIDLSKMNRREREEAIDEA--RVLAKLDSSYIIRYYESFLDKG   72 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCC------cEEEEEEeehhhCCHHHHHHHHHHH--HHHHhcCCCCeehheeeeccCC
Confidence            5889999999999999999976554      4899999875432  2222222222  2566679999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++ ++|.+.+.......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||+++.+.
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~  152 (256)
T cd08529          73 KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS  152 (256)
T ss_pred             EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceecc
Confidence            9999999998 577776665445789999999999999999999999999999999999999999999999999988764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      ..   ........|++.|+|||++.+.   .++.++|+||||+++|+|++|+.||...+..+....+... ..+.++..+
T Consensus       153 ~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  225 (256)
T cd08529         153 DN---TNFANTIVGTPYYLSPELCEDK---PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG-VFPPVSQMY  225 (256)
T ss_pred             Cc---cchhhccccCccccCHHHhcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCcccc
Confidence            32   1122345789999999998643   5788999999999999999999999988877777666543 344566689


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.+++.+||+.+|++||++.++++
T Consensus       226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         226 SQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            999999999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3e-37  Score=323.54  Aligned_cols=271  Identities=21%  Similarity=0.291  Sum_probs=212.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...+..++|.+.++||+|+||.||+|++...... ......||+|.++.............+..++....+|+||+++++
T Consensus         6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (314)
T cd05099           6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLG   85 (314)
T ss_pred             cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence            3456778999999999999999999987543321 124467999998764433222222223334444447999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      ++..++.+|++|||++ |+|.+++....              ...+++..+..++.||+.||.|||++|++||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            9999999999999998 56766665421              24588899999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS  257 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~  257 (620)
                      |++.++.+||+|||+++........ .......+++.|||||.+.+   +.++.++|+||||+++|+|++ |..||.+.+
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~~g~~p~~~~~  241 (314)
T cd05099         166 LVTEDNVMKIADFGLARGVHDIDYY-KKTSNGRLPVKWMAPEALFD---RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP  241 (314)
T ss_pred             EEcCCCcEEEccccccccccccccc-cccccCCCCccccCHHHHcc---CCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999866322111 11112235578999999864   368889999999999999999 899999988


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+++..+... .....+..++.++.+++.+||..||++||++.++++.|...
T Consensus       242 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         242 VEELFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             HHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            88888776544 33456778899999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.3e-37  Score=333.37  Aligned_cols=248  Identities=20%  Similarity=0.228  Sum_probs=197.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||++......  ......++  ..+++.++|+||+++++++.
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E--~~~l~~l~h~~ii~~~~~~~   93 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILE------RNVAIKKLSRPFQNQTHAKRAYRE--LVLMKCVNHKNIIGLLNVFT   93 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCC------cEEEEEEeCccccCchhHHHHHHH--HHHHHhcCCCCccccceeec
Confidence            4578999999999999999999976655      47999999754322  22222222  23667789999999999875


Q ss_pred             EC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          117 IN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ..      ..+|+||||+++++.+.+.    ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  169 (364)
T cd07875          94 PQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD  169 (364)
T ss_pred             ccccccccCeEEEEEeCCCCCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEe
Confidence            43      3579999999998887764    2478899999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+.+..+.....
T Consensus       170 fG~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  242 (364)
T cd07875         170 FGLARTAGT----SFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG  242 (364)
T ss_pred             CCCccccCC----CCcccCCcccCCcCCHHHHhCC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            999976532    1223445799999999998643   688899999999999999999999998877666655543211


Q ss_pred             CCC----------------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPP----------------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~----------------------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.                                        .....+.++++||.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             CCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            110                                        01113467899999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.9e-37  Score=318.61  Aligned_cols=251  Identities=22%  Similarity=0.248  Sum_probs=197.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|++..++      ..||||.++......  ......+.  .+++.++|+||+++++++..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~   72 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTG------QIVAMKKIRLESEEEGVPSTAIREI--SLLKELQHPNIVCLQDVLMQES   72 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCC------cEEEEEEeccccccCCchHHHHHHH--HHHHhcCCCCEeeeEEEEeeCC
Confidence            5899999999999999999976555      479999986543221  12222222  3556678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|+||||+++++.+.+..... ..+++..+..++.||+.||+|||+.+++|+||||+|||++.++.++|+|||++....
T Consensus        73 ~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          73 RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            9999999999988888765433 678999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------  270 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~--------  270 (620)
                      .   .........+++.|+|||.+.+.  ..++.++|+||||+++|+|+||++||.+.+..+....+.....        
T Consensus       153 ~---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
T cd07861         153 I---PVRVYTHEVVTLWYRAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWP  227 (285)
T ss_pred             C---CcccccCCcccccccChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhh
Confidence            1   11222344678999999987643  2467899999999999999999999987665433222211100        


Q ss_pred             -------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -------------------~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                         .......+++++.++|++||..||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         228 GVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             cchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                               00112457899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.3e-37  Score=315.01  Aligned_cols=256  Identities=19%  Similarity=0.362  Sum_probs=203.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||.++....  .. ...+..+.  .+++..+|+||+++++++..
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   73 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDR------KPVALKKVQIFEMMDAKARQDCVKEI--DLLKQLNHPNVIKYLDSFIE   73 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCC------CEEEEEEeeccccCCHHHHHHHHHHH--HHHHhCCCcceeeeeeeEEE
Confidence            57999999999999999999976655      4799998865322  11 12222222  35677799999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .+..+++|||+++ ++.+.+...  +...+++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~  153 (267)
T cd08228          74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccc
Confidence            9999999999994 666666433  2356899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhccCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIP  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~--~~ei~~~i~~~~~~~  272 (620)
                      .......   .......|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||....  ..+..+.+.....++
T Consensus       154 ~~~~~~~---~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T cd08228         154 RFFSSKT---TAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP  227 (267)
T ss_pred             eeccchh---HHHhcCCCCccccChhhhccC---CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC
Confidence            8763211   112235689999999998643   57889999999999999999999997543  344555554333333


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+..++..+.+++.+||..+|++||++.++++.++..
T Consensus       228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            33456889999999999999999999999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.3e-37  Score=322.05  Aligned_cols=254  Identities=21%  Similarity=0.305  Sum_probs=202.3

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..++|++.++||+|+||.||+|.+..++      ..||+|.++............++. .+++.++|+||+++++++...
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~nI~~~~~~~~~~   76 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTD------NLVALKEIRLEHEEGAPCTAIREV-SLLKDLKHANIVTLHDIIHTE   76 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCC------cEEEEEEEecccccCchhHHHHHH-HHHHhcCCCCcceEEEEEecC
Confidence            4578999999999999999999976655      479999987544322221222222 355667999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||+++++.+.+.. ....+++..+..++.||+.||+|||+.+|+|+||||+|||++.++.++|+|||+++...
T Consensus        77 ~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          77 KSLTLVFEYLDKDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             CeEEEEEeccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            99999999999988887764 34578999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------  271 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-------  271 (620)
                      .   .........+++.|+|||++.+.  ..++.++|+||||+++|+|++|++||.+.+..+....+......       
T Consensus       156 ~---~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  230 (301)
T cd07873         156 I---PTKTYSNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWP  230 (301)
T ss_pred             C---CCCcccccceeecccCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhch
Confidence            2   11223345679999999998642  24778999999999999999999999887766554433221100       


Q ss_pred             -------------CC--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 -------------PP--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 -------------~~--------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                   +.        ....+++++++||.+||..||.+||+++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         231 GILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             hhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                         00        11357889999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-38  Score=339.94  Aligned_cols=269  Identities=23%  Similarity=0.361  Sum_probs=224.0

Q ss_pred             ccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hHHHHHHHHHHHHHHHccCCCc
Q 007046           29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        29 ~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      .++.-.+..|..+.+.+.++||+|-||.||+|..+...+  ....-||||..+.+.. ++.+.|+.+.  .+++..+|||
T Consensus       377 ~~P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~k--ge~iaVAvKtCK~d~t~d~tekflqEa--~iMrnfdHph  452 (974)
T KOG4257|consen  377 STPTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEK--GERIAVAVKTCKTDCTPDDTEKFLQEA--SIMRNFDHPH  452 (974)
T ss_pred             cCCCCCcceeehhhccHHHhhcCCcccceeeeEeccccc--CcceeeeeehhccCCChhhHHHHHHHH--HHHHhCCCcc
Confidence            334445667888889999999999999999999876643  2345699999988554 3344444443  5788899999


Q ss_pred             eeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      |++++|+|.. ...|||||+++ |.|..++.. +...++......|+.||+.||+|||+..++||||..+|||+.....+
T Consensus       453 IikLIGv~~e-~P~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CV  530 (974)
T KOG4257|consen  453 IIKLIGVCVE-QPMWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCV  530 (974)
T ss_pred             hhheeeeeec-cceeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCccee
Confidence            9999999975 57999999999 888888875 56789999999999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i  265 (620)
                      ||+|||+++.+.+.......  ...-...|||||.++   ...++.++|||.||+++||++. |..||.+-...+++..+
T Consensus       531 KLaDFGLSR~~ed~~yYkaS--~~kLPIKWmaPESIN---fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i  605 (974)
T KOG4257|consen  531 KLADFGLSRYLEDDAYYKAS--RGKLPIKWMAPESIN---FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI  605 (974)
T ss_pred             eecccchhhhccccchhhcc--ccccceeecCccccc---hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe
Confidence            99999999998654332221  223457899999997   3479999999999999999988 99999999888888777


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .++ .+++.|++||+.+..|+.+||+++|.+||.+.+|...|..
T Consensus       606 EnG-eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsd  648 (974)
T KOG4257|consen  606 ENG-ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD  648 (974)
T ss_pred             cCC-CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence            654 4566899999999999999999999999999988765544

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=3.1e-37  Score=320.65  Aligned_cols=259  Identities=19%  Similarity=0.260  Sum_probs=204.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|....++.    ...+|+|.++.............+...+.++.+||||+++++++...+
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~----~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   76 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDGL----KMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG   76 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCCC----cceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC
Confidence            3689999999999999999998765542    134799988753332222222333334455558999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC
Q 007046          120 KICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~  184 (620)
                      .+|++|||++ |+|.+.+....              ...+++..++.++.||+.||+|||+++++||||||+|||++.++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence            9999999998 67777775321              13588999999999999999999999999999999999999999


Q ss_pred             cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD  263 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~  263 (620)
                      .+||+|||++......    ........+..|+|||++.+.   .++.++|+|||||++|||++ |..||.+....+...
T Consensus       157 ~~kl~dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~  229 (297)
T cd05089         157 ASKIADFGLSRGEEVY----VKKTMGRLPVRWMAIESLNYS---VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE  229 (297)
T ss_pred             eEEECCcCCCccccce----eccCCCCcCccccCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            9999999998643210    011112335679999998643   68889999999999999997 999999988888777


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+... ..+..+..++.++.+|+.+||+.+|.+||++.++++.|+..
T Consensus       230 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         230 KLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             HHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            76543 34456778999999999999999999999999998877654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-38  Score=335.10  Aligned_cols=250  Identities=25%  Similarity=0.365  Sum_probs=214.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .+.|++.+.||+|.||.||+++.+.++      +.+|+|++.+......  .....++..++..+..||||+.+++++++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg------~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTG------KEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCC------ceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            457999999999999999999988775      4799999987554322  23444444455555559999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC----CcEEEeccC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLGDVG  192 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~----~~vkL~DFG  192 (620)
                      ...++||||+|. |.|.|.+...   .+++.++..++.|++.++.|||+.||+||||||+|+|+...    +.+|++|||
T Consensus       108 ~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  108 PDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             CCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            999999999999 6888888764   39999999999999999999999999999999999999643    479999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++.....    .......+|||.|+|||++..   .+|+..+|+||+|+++|.|++|.+||.+.+..+....|.......
T Consensus       185 la~~~~~----~~~~~~~~Gtp~y~APEvl~~---~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f  257 (382)
T KOG0032|consen  185 LAKFIKP----GERLHTIVGTPEYVAPEVLGG---RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF  257 (382)
T ss_pred             CceEccC----CceEeeecCCccccCchhhcC---CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC
Confidence            9988742    345667899999999999964   379999999999999999999999999999999888888776532


Q ss_pred             --CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        .....++..++++|++||..||..|+++.++++
T Consensus       258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence              344678999999999999999999999999998

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.9e-37  Score=317.92  Aligned_cols=263  Identities=22%  Similarity=0.342  Sum_probs=210.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.++||+|+||.||+|...... ....+..+|+|.+..........+..+.  .+++.++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   78 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLL-PEQDKMLVAVKALKEASESARQDFQREA--ELLTVLQHQHIVRFYGVCTE   78 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCC-CCCCceEEEEEecCcCCHHHHHHHHHHH--HHHhcCCCCCCceEEEEEec
Confidence            56788999999999999999999865432 1234567999998765544444343333  25566799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKG-------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~-------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~  183 (620)
                      .+..|++|||++ |+|.+.+.....             ..+++..++.++.||+.||+|||+.+++||||||+|||++++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~  158 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG  158 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence            999999999998 566666643221             357899999999999999999999999999999999999999


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY  262 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~  262 (620)
                      +.++|+|||+++....... ........+++.|+|||++.+.   .++.++|+|||||++|||++ |.+||......+..
T Consensus       159 ~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  234 (280)
T cd05092         159 LVVKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYR---KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI  234 (280)
T ss_pred             CCEEECCCCceeEcCCCce-eecCCCccccccccCHHHhccC---CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH
Confidence            9999999999876532111 1112233467899999998643   58889999999999999998 99999888877777


Q ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       263 ~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ..+.... ....+..+++.+.+++.+||+.||.+||++.+|++.|+
T Consensus       235 ~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         235 ECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            7665443 34457789999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.1e-37  Score=316.19  Aligned_cols=254  Identities=20%  Similarity=0.347  Sum_probs=201.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--  118 (620)
                      +.|++.+.||+|+||.||+|.+..++      +.||+|++....... ..... +...+....+|+||+++++++...  
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~~aik~~~~~~~~~-~~~~~-e~~~l~~~~~h~~i~~~~~~~~~~~~   77 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTGDEE-EEIKQ-EINMLKKYSHHRNIATYYGAFIKKNP   77 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCC------cEEEEEEEEcCCccH-HHHHH-HHHHHHHhcCCCCeeeEeeEEeecCC
Confidence            45888999999999999999876554      489999997544322 22222 222344455899999999998753  


Q ss_pred             ----CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          119 ----GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       119 ----~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                          ..+|++|||++ |++.+.+.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||+
T Consensus        78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          78 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence                46899999998 5777776654456789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      ++.....   ........|++.|+|||++.+..  ...++.++|+|||||++|||++|..||...........+......
T Consensus       158 ~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~  234 (272)
T cd06637         158 SAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP  234 (272)
T ss_pred             ceecccc---cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCC
Confidence            8765321   12234467999999999986321  336888999999999999999999999876665554444433333


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+..++.++.+|+.+||..||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            3345678899999999999999999999999986

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-37  Score=312.67  Aligned_cols=256  Identities=23%  Similarity=0.370  Sum_probs=207.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.+.||+|+||.||+|.+..+       +.||+|.++..... ...+..+.  ..++..+|+||+++++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-------~~v~iK~~~~~~~~-~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNT-------TPVAVKTLKPGTMD-PKDFLAEA--QIMKKLRHPKLIQLYAVCTL   72 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCC-------eEEEEEeeCCCccc-HHHHHHHH--HHHHHCCCCCccceeEEEec
Confidence            6778899999999999999999986432       36999999765432 22233322  24555689999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|++|||++ ++|.+.+.......+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence            999999999996 6777777643445789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......  ........+..|+|||.+.+.   .++.++|+||||+++|||++ |+.||.+.+..+++..+... .....+
T Consensus       153 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~  226 (261)
T cd05068         153 IKEDIY--EAREGAKFPIKWTAPEAALYN---RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMPCP  226 (261)
T ss_pred             ccCCcc--cccCCCcCceeccCccccccC---CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCC
Confidence            642111  111122234689999998643   57889999999999999999 99999998888777766543 334456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++.++.+++.+||+.+|.+||++.++++.|+.
T Consensus       227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            7889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.2e-37  Score=314.75  Aligned_cols=253  Identities=19%  Similarity=0.290  Sum_probs=205.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++++|++.+.||+|+||.||+|.+...       ..||+|.+...... ...+..+.  ..++.++||||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~-------~~~aik~~~~~~~~-~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   70 (256)
T cd05113           1 IDPKDLTFLKELGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMS-EDEFIEEA--KVMMKLSHEKLVQLYGVCTK   70 (256)
T ss_pred             CChHHeEEeeEecCcccceEEEEEecCC-------CcEEEEEcCCCccc-HHHHHHHH--HHHhcCCCCCeeeEEEEEcc
Confidence            5678899999999999999999986432       25999998754332 23333332  25566789999999999998


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|++|||++ |++.+.+.. ....+++..++.++.||+.||.|||+.+++|+||||+||+++.++.+||+|||+++.
T Consensus        71 ~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~  149 (256)
T cd05113          71 QRPIYIVTEYMSNGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRY  149 (256)
T ss_pred             CCCcEEEEEcCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCcccee
Confidence            889999999998 466666543 344789999999999999999999999999999999999999999999999999886


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......  .......++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..++...+.... ....+
T Consensus       150 ~~~~~~--~~~~~~~~~~~y~~pe~~~~~---~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~  223 (256)
T cd05113         150 VLDDEY--TSSVGSKFPVRWSPPEVLLYS---KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-RLYRP  223 (256)
T ss_pred             cCCCce--eecCCCccChhhCCHHHHhcC---cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-CCCCC
Confidence            643211  111223456789999998643   57889999999999999999 999998888877777776543 34456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ...+..+.+++.+||..||.+||++.+|++.+
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            67899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=4.8e-37  Score=318.08  Aligned_cols=265  Identities=22%  Similarity=0.351  Sum_probs=212.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++..+|.+.+.||+|+||.||+|.+..... ......+|+|.+..........+..+.  ..++..+|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   78 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSP-TKDKMLVAVKALKDPTLAARKDFQREA--ELLTNLQHEHIVKFYGVCGD   78 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCC-CCcceeeEEEecCCccHHHHHHHHHHH--HHHhcCCCCCcceEEEEEcc
Confidence            456789999999999999999998754432 234567999998765544434443332  24566789999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      .+..++||||++ ++|.+.+....              ...+++..++.++.||+.||+|||+++|+||||||+|||++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~  158 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA  158 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            999999999998 56666664321              234889999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  261 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei  261 (620)
                      ++.++|+|||+++....... ........+++.|+|||++.+.   .++.++|+||||+++|||+| |..||...+..+.
T Consensus       159 ~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  234 (291)
T cd05094         159 NLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV  234 (291)
T ss_pred             CCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999876532211 1112334578899999998643   57889999999999999999 9999988888777


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+.+... ..+..+..++..+.+++.+||+.||++||++.++++.|...
T Consensus       235 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         235 IECITQG-RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             HHHHhCC-CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            7766443 33445677899999999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.9e-37  Score=329.75  Aligned_cols=269  Identities=20%  Similarity=0.326  Sum_probs=205.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|.+..... ...++.||||+++.............+...+..+.+|+||+++++++.
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCc-cccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            3567899999999999999999998765432 345678999999765433322222233334555558999999999876


Q ss_pred             E-CCEEEEEEecCC-CChHHHHHHhc------------------------------------------------------
Q 007046          117 I-NGKICIIMKFYE-GSVGDRMAQLK------------------------------------------------------  140 (620)
Q Consensus       117 ~-~~~~~IVmE~~~-GsLld~l~~~~------------------------------------------------------  140 (620)
                      . +..++++|||++ |+|.+.+....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            5 456899999999 56766664311                                                      


Q ss_pred             -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCC
Q 007046          141 -----------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR  209 (620)
Q Consensus       141 -----------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~  209 (620)
                                 ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~  240 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGD  240 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcCC
Confidence                       12467888899999999999999999999999999999999999999999999876532111 111122


Q ss_pred             cCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHH
Q 007046          210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG  288 (620)
Q Consensus       210 ~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~  288 (620)
                      ..+++.|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+..............|..+++++.+++.+
T Consensus       241 ~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (343)
T cd05103         241 ARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  317 (343)
T ss_pred             CCCCcceECcHHhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHH
Confidence            3467789999998643   58889999999999999997 9999987654433333333334455567788999999999


Q ss_pred             hhhcCcCCCCCHHHHHHHHHhC
Q 007046          289 CFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       289 cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ||+.||++||++.+|++.|...
T Consensus       318 cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         318 CWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HccCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1e-37  Score=316.54  Aligned_cols=254  Identities=22%  Similarity=0.352  Sum_probs=210.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||.|+||.||+|.+.. +      ..+|+|++..........+..+.  ..++.++|+||+++++++...+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~------~~~~~k~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   75 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-R------VRVAIKILKSDDLLKQQDFQKEV--QALKRLRHKHLISLFAVCSVGE   75 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-C------CcEEEEeccccchhhHHHHHHHH--HHHhcCCCcchhheeeeEecCC
Confidence            4579999999999999999999765 2      36999999765543333333332  2456678999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++ |+|.+.+.......+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148          76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence            9999999998 577777765455678999999999999999999999999999999999999999999999999997763


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...   .......+++.|+|||.+..   ..++.++|+||||+++|+|++ |..||...+..+++..+... ...+.+..
T Consensus       156 ~~~---~~~~~~~~~~~~~~PE~~~~---~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~  228 (261)
T cd05148         156 EDV---YLSSDKKIPYKWTAPEAASH---GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMPCPAK  228 (261)
T ss_pred             Ccc---ccccCCCCceEecCHHHHcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCCCCCC
Confidence            321   11223456788999999863   368889999999999999998 89999988888888777643 34556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +++++.+++.+||..||++||++.+|++.|+.
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         229 CPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.3e-37  Score=317.19  Aligned_cols=256  Identities=22%  Similarity=0.317  Sum_probs=202.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ....++|++.+.||+|+||.||+|.+..++      +.||+|.++.........+.++.  .+++..+|+||+++++++.
T Consensus         5 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~e~--~~~~~l~h~~ii~~~~~~~   76 (267)
T cd06645           5 RNPQEDFELIQRIGSGTYGDVYKARNVNTG------ELAAIKVIKLEPGEDFAVVQQEI--IMMKDCKHSNIVAYFGSYL   76 (267)
T ss_pred             cCcHHHHHHHHHhCCCCCeEEEEEEEcCCC------cEEEEEEEecCchhHHHHHHHHH--HHHHhCCCCCeeeEEEEEE
Confidence            344568999999999999999999876555      47999999765443333333322  3566679999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..|+||||+++ +|.+++.  ..+.+++.+++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd06645          77 RRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSA  154 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeee
Confidence            99999999999995 6666654  35679999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-C
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-I  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-~  274 (620)
                      .....   ........||+.|+|||++.....+.++.++|+|||||++|+|++|..||..................+. .
T Consensus       155 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  231 (267)
T cd06645         155 QITAT---IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKL  231 (267)
T ss_pred             EccCc---ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcc
Confidence            65321   1222345799999999997533344688899999999999999999999976655444333332222221 1


Q ss_pred             --CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 --PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 --p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        ...++..+.++|.+||..+|++||+++++++
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence              1257889999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=4.9e-37  Score=312.55  Aligned_cols=251  Identities=19%  Similarity=0.284  Sum_probs=198.7

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEec
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKF  127 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~  127 (620)
                      .||+|+||.||+|.+....    .+..||+|++...........+.++. .+++.++|+||+++++++. ....++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~----~~~~vavk~~~~~~~~~~~~~~~~E~-~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRK----KQIDVAIKVLKNENEKSVRDEMMREA-EIMHQLDNPYIVRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCC----CceeEEEEEcccccChHHHHHHHHHH-HHHHhcCCCCeEEEEEEEc-CCCeEEEEEe
Confidence            4899999999999875432    23469999997654433333333333 2556679999999999875 4578999999


Q ss_pred             CCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCC
Q 007046          128 YEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD  206 (620)
Q Consensus       128 ~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~  206 (620)
                      ++| +|.+.+. .....+++..++.++.||+.||.|||+++++||||||+|||++.++.+||+|||+++.+.........
T Consensus        76 ~~~~~L~~~l~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  154 (257)
T cd05115          76 ASGGPLNKFLS-GKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA  154 (257)
T ss_pred             CCCCCHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence            985 5555543 34567999999999999999999999999999999999999999999999999999865432211112


Q ss_pred             CCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHH
Q 007046          207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV  285 (620)
Q Consensus       207 ~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~L  285 (620)
                      .....+++.|+|||++...   .++.++|+||||+++|++++ |..||......++...+... ..+..+..+++++.++
T Consensus       155 ~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l  230 (257)
T cd05115         155 RSAGKWPLKWYAPECINFR---KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-KRLDCPAECPPEMYAL  230 (257)
T ss_pred             cCCCCCCcccCCHHHHccC---CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CCCCCCCCCCHHHHHH
Confidence            2223346789999998643   57889999999999999996 99999988888777666543 4456778899999999


Q ss_pred             HHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          286 LLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       286 i~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      |.+||..||++||++.+|.+.|+.
T Consensus       231 i~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         231 MKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHhh
Confidence            999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3.9e-37  Score=318.59  Aligned_cols=266  Identities=23%  Similarity=0.311  Sum_probs=212.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++.......  ......+. .+++.++|+||+++++++..+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~   73 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSG------KYYALKILSKAKIVKLKQVEHVLNEK-RILQSIRHPFLVNLYGSFQDD   73 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCC------CEEEEEEEEHHHhhhhhHHHHHHHHH-HHHHhCCCCCccceeeEEEcC
Confidence            47999999999999999999986554      4899999975432211  11122222 256667899999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++ ++|.+.+..  ...+++..+..++.||+.||.|||+.+++|+||+|+|||++.++.+||+|||+++..
T Consensus        74 ~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~  151 (290)
T cd05580          74 SNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRV  151 (290)
T ss_pred             CeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCcccc
Confidence            99999999996 677777653  467999999999999999999999999999999999999999999999999998876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...      .....|++.|+|||.+.+.   ..+.++|+||||+++|+|++|..||...+..+..+.+...  ...++..
T Consensus       152 ~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~  220 (290)
T cd05580         152 KGR------TYTLCGTPEYLAPEIILSK---GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KVRFPSF  220 (290)
T ss_pred             CCC------CCCCCCCccccChhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CccCCcc
Confidence            331      3345799999999998643   5778999999999999999999999888877777666533  4456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCC
Q 007046          278 LPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSS  326 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~  326 (620)
                      ++..++++|.+||..||.+|+     +++++++ .+....+|..........|..
T Consensus       221 ~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  275 (290)
T cd05580         221 FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFI  275 (290)
T ss_pred             CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCcc
Confidence            899999999999999999999     7888886 334444555554444444433

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-37  Score=313.02  Aligned_cols=257  Identities=21%  Similarity=0.313  Sum_probs=203.4

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      |++.+.||+|+||.||+|.+.....   ....||+|.++.....  ....+..+.  ..++.++|+||+++++++.....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDG---SQLKVAVKTMKLDIHTYSEIEEFLSEA--ACMKDFDHPNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCC---CcceEEEEEeccCcCCHHHHHHHHHHH--HHHHhCCCCCeeeEEeeeccCCc
Confidence            5788999999999999998765331   2357999999764322  222333332  35566799999999998876544


Q ss_pred             ------EEEEEecCC-CChHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          121 ------ICIIMKFYE-GSVGDRMAQLK----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       121 ------~~IVmE~~~-GsLld~l~~~~----~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                            .+++|||++ |++.+.+....    ...+++..+..++.|++.||.|||+++++||||||+||++++++.+||+
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  155 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVA  155 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEEC
Confidence                  799999999 56665554322    2468999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~  268 (620)
                      |||+++........ .......++..|+|||.+.+.   .++.++|+|||||++|||++ |..||.+.+..++++.+...
T Consensus       156 dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05035         156 DFGLSKKIYSGDYY-RQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG  231 (273)
T ss_pred             Cccceeeccccccc-cccccccCCccccCHhhcccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999876432211 111223457789999998543   67889999999999999999 99999988888888777544


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                       ..+..+..++.++.+++.+||+.||++||++.++++.|..
T Consensus       232 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         232 -NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             -CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence             3455678899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=4.6e-37  Score=315.71  Aligned_cols=264  Identities=22%  Similarity=0.321  Sum_probs=208.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .+..++|++.+.||+|+||.||+|.+.....+ .....||+|.+........ ..+..+.  ..++..+|+||+++++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~   78 (277)
T cd05036           2 EVPRDSITLLRALGHGAFGEVYEGLYRGRDGD-AVELQVAVKTLPESCSEQDESDFLMEA--LIMSKFNHQNIVRLIGVS   78 (277)
T ss_pred             CCCHHHcEeeeECCCCCCCcEEEEEEecCCCC-CCceeEEEEEcCCCCCHHHHHHHHHHH--HHHHhCCCCCEeeEEEEE
Confidence            45667899999999999999999998652211 1346899999875443332 2233322  355667999999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cE
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RA  186 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~-----~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~v  186 (620)
                      ...+..|+||||++ |+|.+.+.....     ..+++..++.++.||+.||+|||+++++||||||+|||++.++   .+
T Consensus        79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~  158 (277)
T cd05036          79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA  158 (277)
T ss_pred             ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence            98889999999998 577777654321     2589999999999999999999999999999999999998765   59


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i  265 (620)
                      ||+|||+++........ ........++.|||||++.+   +.++.++|+|||||++|||++ |..||.+.+..++...+
T Consensus       159 kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~  234 (277)
T cd05036         159 KIADFGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLD---GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV  234 (277)
T ss_pred             EeccCccccccCCccce-ecCCCCCccHhhCCHHHHhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999876322111 11112234578999999863   368899999999999999997 99999988887777666


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .. ......+..++..+.+++.+||+.+|++||++.++++.|.
T Consensus       235 ~~-~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 TG-GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             Hc-CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            43 3445567889999999999999999999999999999774

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=8e-37  Score=323.26  Aligned_cols=272  Identities=19%  Similarity=0.285  Sum_probs=214.7

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCC-CcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDC-DEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~-~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      +...+...+|++.+.||+|+||.||+|++...+++. .....||+|.++.............+...+.++.+|+||++++
T Consensus         5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (334)
T cd05100           5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL   84 (334)
T ss_pred             cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence            455677789999999999999999999876544322 2345799999875443332222333333444444899999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      +++..++.+|++|||++ |+|.+++....              ...+++..++.++.||+.||.|||++|++||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  164 (334)
T cd05100          85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN  164 (334)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            99999999999999998 57777765421              2357888999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      ||++.++.+||+|||+++........ .......++..|||||.+.+.   .++.++|+||||+++|||++ |..||.+.
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~  240 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGI  240 (334)
T ss_pred             EEEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcCHHHhccC---CcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999865332111 111223456789999998643   57889999999999999998 89999998


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..+....+... .....+..++.++.+++.+||+.+|++||++.++++.|...
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~  293 (334)
T cd05100         241 PVEELFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV  293 (334)
T ss_pred             CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            888887776543 34456778899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-37  Score=310.12  Aligned_cols=255  Identities=23%  Similarity=0.336  Sum_probs=204.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||.|+||.||+|.+..++      ..+|+|++..........+..+.  .+++.++|+||+++++++...+
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~~~~~   73 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATG------ELVAIKVIKLEPGDDFEIIQQEI--SMLKECRHPNIVAYFGSYLRRD   73 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCC------CEEEEEEEEcCchhhHHHHHHHH--HHHHhCCCCChhceEEEEEeCC
Confidence            478999999999999999999976554      37999999765544333333333  2566779999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+|++|||++|+.+..+.......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh
Confidence            99999999996554544433446899999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC---CCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---PIPS  276 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~---~~p~  276 (620)
                      .   ........++..|+|||.+.+.....++.++|+||||+++|+|++|..||...+..+....+......+   ..+.
T Consensus       154 ~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (262)
T cd06613         154 T---IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKE  230 (262)
T ss_pred             h---hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchh
Confidence            1   112234578999999999865433468889999999999999999999998877665544443332222   1234


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.++.+++.+||..+|.+||++.+++.
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         231 KWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            56788999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3.7e-37  Score=316.93  Aligned_cols=253  Identities=19%  Similarity=0.272  Sum_probs=204.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      -|++.+.||+|+||.||+|.+..++      ..+|+|.+..........+..+.  ..++.++|+||+++++++..++..
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~--~~l~~l~h~~ii~~~~~~~~~~~~   77 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETG------VLAAAKVIDTKSEEELEDYMVEI--DILASCDHPNIVKLLDAFYYENNL   77 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCC------eEEEEEEeCCCCHHHHHHHHHHH--HHHHHCCCCCeeeEEEEEeeCCEE
Confidence            3688999999999999999976655      47999999765544444444433  255667999999999999999999


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      |+||||+++++++.+......++++..+..++.|++.||.|||+.+++||||||+|||++.++.++|+|||++...... 
T Consensus        78 ~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-  156 (282)
T cd06643          78 WILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-  156 (282)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-
Confidence            9999999965555544334568999999999999999999999999999999999999999999999999998765321 


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCC
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGL  278 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~  278 (620)
                        ........||+.|+|||++...  ....++.++|+|||||++|+|++|.+||...+..+....+..... ....+..+
T Consensus       157 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd06643         157 --IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW  234 (282)
T ss_pred             --ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCcccc
Confidence              1222345789999999998422  233577899999999999999999999988777666555543322 22346678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.++|.+||+.||.+||++.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         235 SSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-37  Score=320.21  Aligned_cols=268  Identities=21%  Similarity=0.253  Sum_probs=209.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+.......  .......+. ..++.++|+||+++++.+...
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~   73 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTG------KLFALKVLDKKEMIKRNKVKRVLTEQ-EILATLDHPFLPTLYASFQTE   73 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCC------cEEEEEEEeccccchHHHHHHHHHHH-HHHHhCCCCCchhheeeeecC
Confidence            47999999999999999999976654      489999998654332  111122222 356677899999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ...|+||||+.| +|.+++.......+++..+..++.||+.||+|||+.+++|+||||+||+++.++.++|+|||++...
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574          74 TYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             CEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence            999999999985 7777665444578999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCC--------------------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCC
Q 007046          198 LGIPLP--------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ  251 (620)
Q Consensus       198 ~~~~~~--------------------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~  251 (620)
                      ......                          ........||..|+|||++.+.   .++.++|+||||+++|+|++|..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Di~slG~ll~~l~~g~~  230 (316)
T cd05574         154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD---GHGSAVDWWTLGILLYEMLYGTT  230 (316)
T ss_pred             cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC---CCCchHHHHHHHHHHHHHhhCCC
Confidence            321100                          0111234689999999998643   57889999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCC----HHHHHH-HHHhCCCCCCCCC
Q 007046          252 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL----MTDILR-VFKSDGGWTGHGS  318 (620)
Q Consensus       252 Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs----~~eil~-~L~~~~~~~~~~~  318 (620)
                      ||.+.+..+.+..+............++.++.+++.+||+.||++||+    +.++++ .+....+|.....
T Consensus       231 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~  302 (316)
T cd05574         231 PFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRH  302 (316)
T ss_pred             CCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhccc
Confidence            999888777766665443333223347999999999999999999999    888887 2333445544433

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=5.5e-37  Score=315.94  Aligned_cols=263  Identities=20%  Similarity=0.318  Sum_probs=206.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .+..++|++.+.||+|+||.||+|.+..++..  ....||+|.+........ ..+..+.  ..+...+|+||+++++++
T Consensus         3 ~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~--~~l~~l~h~~iv~~~~~~   78 (279)
T cd05111           3 ILKETELRKLKLLGSGVFGTVHKGIWIPEGDS--IKIPVAIKTIQDRSGRQTFQEITDHM--LAMGSLDHAYIVRLLGIC   78 (279)
T ss_pred             cCCHhhceeccccCccCCcceEEEEEcCCCCc--eeeEEEEeecccccchHHHHHHHHHH--HHHhcCCCCCcceEEEEE
Confidence            45678899999999999999999998655431  123588888864332221 2122111  245667999999999987


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      . ....+++|||++ |+|.+.+.. ....+++..+..++.||+.||+|||+++++||||||+|||++.++.+||+|||++
T Consensus        79 ~-~~~~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~  156 (279)
T cd05111          79 P-GASLQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVA  156 (279)
T ss_pred             C-CCccEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence            5 456788999998 677777653 4567899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +...... .........++..|+|||.+.+   +.++.++|+||||+++|||++ |..||.+....++.+.+. ....+.
T Consensus       157 ~~~~~~~-~~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~  231 (279)
T cd05111         157 DLLYPDD-KKYFYSEHKTPIKWMALESILF---GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-KGERLA  231 (279)
T ss_pred             eeccCCC-cccccCCCCCcccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCC
Confidence            8663221 1112234457789999999863   368899999999999999998 999999887776655554 334455


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..++.++.+++.+||..||++||++.++++.|...
T Consensus       232 ~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         232 QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            5677899999999999999999999999999977663

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=9.1e-37  Score=308.48  Aligned_cols=250  Identities=25%  Similarity=0.436  Sum_probs=203.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE-CC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI-NG  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-~~  119 (620)
                      +|++.+.||+|+||.||++.+..++      +.||+|.+....... .......+. .+++.++|+|++++++.+.. +.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~   73 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDG------KQYVIKKLNLRNASRRERKAAEQEA-QLLSQLKHPNIVAYRESWEGEDG   73 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCC------cEEEEEEEehhhcCHHHHHHHHHHH-HHHHhCCCCCeeeeeeeecCCCC
Confidence            5899999999999999999986654      479999997543322 122222222 35666789999999988764 45


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|++|||++ +++.+.+.......+++.++..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++....
T Consensus        74 ~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223          74 LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence            7899999998 567666665445678999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      ..   ........|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+.... .+..+..+
T Consensus       154 ~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  226 (257)
T cd08223         154 NQ---CDMASTLIGTPYYMSPELFSNK---PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPKDY  226 (257)
T ss_pred             cc---CCccccccCCcCccChhHhcCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-CCCCcccc
Confidence            32   1223445789999999998643   67889999999999999999999998887766666554433 34567789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++++.+++.+||+.||++||++.++++
T Consensus       227 ~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         227 SPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=5.3e-37  Score=309.96  Aligned_cols=249  Identities=24%  Similarity=0.324  Sum_probs=196.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||+|++..++      +.||+|.+..............+. .+++.++|+||+++++++......|+|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   73 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADN------TPVAVKSCRETLPPDLKAKFLQEA-RILKQYSHPNIVRLIGVCTQKQPIYIVME   73 (252)
T ss_pred             CccCcccCccEEEEEEecCC------ceEEEEecCccCCHHHHHHHHHHH-HHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence            46999999999999986554      479999886543322222222222 24566799999999999999999999999


Q ss_pred             cCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++| ++.+.+.. ....+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++....... ..
T Consensus        74 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~  151 (252)
T cd05084          74 LVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-AS  151 (252)
T ss_pred             eccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc-cc
Confidence            9985 55555542 445789999999999999999999999999999999999999999999999999876432110 11


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......++..|+|||.+.+.   .++.++|+||||+++|||++ |..||...........+.. ......+..++..+.+
T Consensus       152 ~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  227 (252)
T cd05084         152 TGGMKQIPVKWTAPEALNYG---RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-GVRLPCPELCPDAVYR  227 (252)
T ss_pred             cCCCCCCceeecCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCCCcccCCHHHHH
Confidence            11112335679999998643   58889999999999999998 9999988777666665543 3344567788999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          285 VLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ++.+||..+|++||++.++++.|+
T Consensus       228 li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         228 LMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHh
Confidence            999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-38  Score=312.89  Aligned_cols=255  Identities=25%  Similarity=0.421  Sum_probs=213.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .++++++.+..||.|+.|.|++++.+.++      +..|||.+.+.... .....+..+ .+++++.++|+||+.+|+|.
T Consensus        89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~------~iiAVK~M~rt~Nkee~kRILmDl-dvv~~s~dcpyIV~c~GyFi  161 (391)
T KOG0983|consen   89 ADINDLENLGDLGSGTCGQVWKMRFRSTG------HIIAVKQMRRTGNKEENKRILMDL-DVVLKSHDCPYIVQCFGYFI  161 (391)
T ss_pred             cChHHhhhHHhhcCCCccceEEEEEcccc------eEEEEEeecccCCHHHHHHHHHhh-hHHhhccCCCeeeeeeeEEe
Confidence            55677888899999999999999998776      48999999875543 333333333 35677778999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .+...+|.||.|.-....++.+ -.+++++.-+-++...++.||.||-.+ +|||||+||+|||+|+.|++||||||++.
T Consensus       162 ~n~dV~IcMelMs~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG  240 (391)
T KOG0983|consen  162 TNTDVFICMELMSTCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG  240 (391)
T ss_pred             eCchHHHHHHHHHHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence            9999999999997544444443 567899999999999999999999975 79999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~~~  274 (620)
                      .+.+    ....+...|.+.|||||.+.......|+.++||||||++++||.||+.||.+.+ ..+++.++.+ .++|.+
T Consensus       241 rlvd----SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L  315 (391)
T KOG0983|consen  241 RLVD----SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLL  315 (391)
T ss_pred             eeec----ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCC
Confidence            7754    334455689999999999987666789999999999999999999999999854 5577777776 445655


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 P--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +  .++++++.+|+..||.+|+.+||.+.++++
T Consensus       316 ~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  316 PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             CcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            5  348999999999999999999999999997

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=5.8e-37  Score=317.08  Aligned_cols=266  Identities=23%  Similarity=0.336  Sum_probs=208.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcC----------CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTED----------CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed----------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      +..++|++.++||+|+||.||+|.+..++..          ......||+|++..............+. .+++.++|+|
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~-~~l~~l~~~~   80 (296)
T cd05051           2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEV-KILSRLSDPN   80 (296)
T ss_pred             CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHH-HHHHhcCCCC
Confidence            3567899999999999999999988654421          1244679999998655443333333333 2455678999


Q ss_pred             eeEeEEEEEECCEEEEEEecCC-CChHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK---------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~---------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      |+++++++..++..+++|||++ ++|.+++....         ...+++..++.++.|++.||+|||+++++||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            9999999999999999999998 56666654322         1268999999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCG  255 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~~  255 (620)
                      |+++.++.++|+|||+++....... ........+|+.|||||++.+   +.++.++|+|||||++|||++  +..||..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  236 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLL---GKFTTKSDVWAFGVTLWEILTLCREQPYEH  236 (296)
T ss_pred             eeecCCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhc---CCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999876532211 111233457889999999864   358889999999999999998  7889988


Q ss_pred             CCHHHHHHHHHhc------cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          256 RSVDEIYDAVVRR------QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       256 ~~~~ei~~~i~~~------~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .+..+++..+...      ......+..++.++.+++.+||+.||++||++.+|++.|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         237 LTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             cChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            7777766665432      1112345567899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.5e-37  Score=311.85  Aligned_cols=253  Identities=20%  Similarity=0.319  Sum_probs=203.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++.+|++.+.||+|+||.||+|.+...       ..+|+|.+....... ..+.++.  .+++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~-------~~~~iK~~~~~~~~~-~~~~~e~--~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd05059           1 IDPSELTFLKELGSGQFGVVHLGKWRGK-------IDVAIKMIREGAMSE-DDFIEEA--KVMMKLSHPNLVQLYGVCTK   70 (256)
T ss_pred             CChHHcchhhhhccCCCceEEEeEecCC-------ccEEEEEeccCCCCH-HHHHHHH--HHHHhCCCCCEEEEEEEEcC
Confidence            4667899999999999999999987532       259999986543222 2233332  25566789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+.+++||||||+||+++.++.+||+|||+++.
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~  149 (256)
T cd05059          71 QRPIFIVTEYMANGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARY  149 (256)
T ss_pred             CCceEEEEecCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCccccee
Confidence            9999999999985 66666643 345789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ..+...  .......++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..+....+... .....+
T Consensus       150 ~~~~~~--~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~  223 (256)
T cd05059         150 VLDDQY--TSSQGTKFPVKWAPPEVFDYS---RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRLYRP  223 (256)
T ss_pred             cccccc--cccCCCCCCccccCHHHhccC---CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcCCCC
Confidence            532111  111122345689999998643   57889999999999999999 89999888877777766543 344556


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ..++.++.+++.+||..+|++||++.++++.|
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            77899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.1e-38  Score=321.76  Aligned_cols=254  Identities=23%  Similarity=0.297  Sum_probs=209.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCc-eeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEG-ICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~n-Iv~l~g~~~~  117 (620)
                      .+.|..+++||+|+||+||+|+.+.++.      .||+|+++.+..+ ..-....++. .+++.++|+| |+.+++++..
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~------~VALKkirl~~~~EG~P~taiREi-sllk~L~~~~~iv~L~dv~~~   82 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGK------FVALKKIRLEFEEEGVPSTAIREI-SLLKRLSHANHIVRLHDVIHT   82 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCC------EEEEEEEeccccccCCCchhhHHH-HHHHHhCCCcceEEEEeeeee
Confidence            5668888999999999999999887764      7999999876553 2111112222 3677788998 9999999998


Q ss_pred             CC------EEEEEEecCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          118 NG------KICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       118 ~~------~~~IVmE~~~GsLld~l~~~~~--~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      .+      .+++|+||+.-++-+++.....  ..++...++.++.||+.||+|||+++|+||||||+||||+++|.+||+
T Consensus        83 ~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKla  162 (323)
T KOG0594|consen   83 SNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLA  162 (323)
T ss_pred             cccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeee
Confidence            77      8999999999999998886543  367788999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+|+.+.   .+....+..++|.+|.|||++.+..  .|+...|+||+|||++||+++++.|.+....+.+..|.+..
T Consensus       163 DFGlAra~~---ip~~~yt~evvTlWYRaPEvLlGs~--~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l  237 (323)
T KOG0594|consen  163 DFGLARAFS---IPMRTYTPEVVTLWYRAPEVLLGST--SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL  237 (323)
T ss_pred             ccchHHHhc---CCcccccccEEEeeccCHHHhcCCC--cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc
Confidence            999999653   2344566778999999999998753  48999999999999999999999999998877777776543


Q ss_pred             CCCC----------------CC------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPP----------------IP------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~----------------~p------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..|.                ++            +..+++..+++.+||+++|.+|.|++.++.
T Consensus       238 GtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  238 GTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT  301 (323)
T ss_pred             CCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence            3331                00            122357889999999999999999999987

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=3e-37  Score=342.07  Aligned_cols=250  Identities=20%  Similarity=0.234  Sum_probs=190.4

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHH-HHHccCCCceeEeEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDL-FLKCQGVEGICWLQGIS  115 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~-~l~~~~h~nIv~l~g~~  115 (620)
                      ..++|++.++||+|+||.||+|.+..++      +.||||+++......  .......+..+ .....+|.+++++++++
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~------~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRK------EYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCC------eEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            4578999999999999999999976654      479999996532211  11111111111 11223566799999988


Q ss_pred             EEC-CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCC---------
Q 007046          116 VIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEAD---------  184 (620)
Q Consensus       116 ~~~-~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~---------  184 (620)
                      ..+ .++|||||++.+++++.+.  +.+.+++..+..++.||+.||+|||+ .||+||||||+|||++.++         
T Consensus       201 ~~~~~~~~iv~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~  278 (467)
T PTZ00284        201 QNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR  278 (467)
T ss_pred             EcCCceEEEEEeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccc
Confidence            764 5799999999999998886  34689999999999999999999998 5999999999999998765         


Q ss_pred             -------cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 007046          185 -------RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  257 (620)
Q Consensus       185 -------~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~  257 (620)
                             .+||+|||++...      .......+||+.|||||++.+.   .++.++|||||||++|||++|++||.+.+
T Consensus       279 ~~~~~~~~vkl~DfG~~~~~------~~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvil~elltG~~pf~~~~  349 (467)
T PTZ00284        279 ALPPDPCRVRICDLGGCCDE------RHSRTAIVSTRHYRSPEVVLGL---GWMYSTDMWSMGCIIYELYTGKLLYDTHD  349 (467)
T ss_pred             ccCCCCceEEECCCCccccC------ccccccccCCccccCcHHhhcC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                   4999999987543      1233456899999999999654   68899999999999999999999998877


Q ss_pred             HHHHHHHHHhccCCC-------------------------CC-C--------------CCCCHHHHHHHHHhhhcCcCCC
Q 007046          258 VDEIYDAVVRRQEIP-------------------------PI-P--------------SGLPPAVENVLLGCFEYDLRSR  297 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~-------------------------~~-p--------------~~~s~~l~~Li~~cL~~dP~~R  297 (620)
                      ..+.+..+.......                         .. +              ....+.+.+||.+||.+||++|
T Consensus       350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R  429 (467)
T PTZ00284        350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR  429 (467)
T ss_pred             hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence            665544433211100                         00 0              0113557799999999999999


Q ss_pred             CCHHHHHH
Q 007046          298 PLMTDILR  305 (620)
Q Consensus       298 Ps~~eil~  305 (620)
                      |+++|+++
T Consensus       430 ~ta~e~L~  437 (467)
T PTZ00284        430 LNARQMTT  437 (467)
T ss_pred             CCHHHHhc
Confidence            99999997

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=6.7e-37  Score=312.20  Aligned_cols=255  Identities=24%  Similarity=0.380  Sum_probs=205.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |..++|++.++||+|+||.||+|++..+.       .||+|+++...... ..+..+ . .+++.++|+||+++++++. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-------~valK~~~~~~~~~-~~~~~E-~-~~l~~l~~~~i~~~~~~~~-   71 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSP-EAFLQE-A-QVMKKLRHEKLVQLYAVVS-   71 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCc-------eEEEEecccCccCH-HHHHHH-H-HHHHhCCCCCcceEEEEEC-
Confidence            67789999999999999999999865432       59999997544322 222222 2 2555678999999999874 


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|+||||++ |++.+++.......+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||+++.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceee
Confidence            456899999998 5777777644445689999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      +.....  .......++..|+|||++.+   ..++.++|+||||+++|+|++ |..||.+....++...+.... ....+
T Consensus       152 ~~~~~~--~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~  225 (262)
T cd05071         152 IEDNEY--TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCP  225 (262)
T ss_pred             cccccc--ccccCCcccceecCHhHhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CCCCc
Confidence            643211  11123356778999998853   368899999999999999999 899998888877777665433 33456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++.++.+++.+||+.||++||++.++++.|+.
T Consensus       226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            7789999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=5.9e-37  Score=311.39  Aligned_cols=256  Identities=23%  Similarity=0.362  Sum_probs=208.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|..++|++.++||+|+||.||+|....       ++.||+|.+....... ..+..+.  .+++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~-------~~~~a~K~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~~~~~~   71 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNG-------HTKVAIKSLKQGSMSP-EAFLAEA--NLMKQLQHPRLVRLYAVVT   71 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCC-------CceEEEEEecCCCCcH-HHHHHHH--HHHHhcCCcCeeeEEEEEc
Confidence            5778899999999999999999998543       2479999997654432 2233322  3566678999999999864


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                       .+..|++|||++ |++.+.+.......+++..+..++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++.
T Consensus        72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  150 (260)
T cd05067          72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR  150 (260)
T ss_pred             -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence             567899999998 677777765455678999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .......  .......++..|+|||++..   +.++.++|+||||+++|||++ |+.||.+.+..+....+... ...+.
T Consensus       151 ~~~~~~~--~~~~~~~~~~~y~~pe~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  224 (260)
T cd05067         151 LIEDNEY--TAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRMPR  224 (260)
T ss_pred             ecCCCCc--ccccCCcccccccCHHHhcc---CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCCCC
Confidence            7642111  11123356788999999864   357889999999999999999 99999988887777766543 34456


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||..+|++||+++++++.|+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         225 PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            77889999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.5e-37  Score=313.64  Aligned_cols=256  Identities=20%  Similarity=0.362  Sum_probs=203.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.+.||+|+||.||+|.+..++      ..||||.+.......   ...+..+.  .+++..+|+||+++++++..
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~~~   73 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDG------VPVALKKVQIFDLMDAKARADCIKEI--DLLKQLNHPNVIKYYASFIE   73 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCC------ceEEEEeeeehhhhhHHHHHHHHHHH--HHHHHccCCchhhhhheeEe
Confidence            57899999999999999999976554      479999886533221   12222222  35666799999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ++..+++|||++| +|.+++...  ....+++..++.++.||+.||.|||+++++|+||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~  153 (267)
T cd08229          74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhh
Confidence            9999999999995 666666532  2356899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhccCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVVRRQEIP  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~--~ei~~~i~~~~~~~  272 (620)
                      .......   .......|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+...  .+....+......+
T Consensus       154 ~~~~~~~---~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T cd08229         154 RFFSSKT---TAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP  227 (267)
T ss_pred             hccccCC---cccccccCCcCccCHHHhcCC---CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC
Confidence            7663221   122345789999999998643   578899999999999999999999976543  34444444333333


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+..+++++.+++.+||..||++||++.+|++.+++.
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            33456889999999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-38  Score=334.83  Aligned_cols=254  Identities=23%  Similarity=0.374  Sum_probs=194.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      ++|.-...||+|+||.||+|.....       ..||||.+.........++..+..  ++..++|+|+|+|+|||.+.+ 
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-------~~vAVK~~~~~~~~~~~eF~~Ei~--~ls~l~H~Nlv~LlGyC~e~~~  145 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSDG-------TVVAVKRLSSNSGQGEREFLNEVE--ILSRLRHPNLVKLLGYCLEGGE  145 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECCC-------CEEEEEEecCCCCcchhHHHHHHH--HHhcCCCcCcccEEEEEecCCc
Confidence            5677778999999999999986443       479999887765432333555543  556677999999999999988 


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCC---CeeecccCCcEEEccCCcEEEeccCCc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGG-KLSLSNVFRYAIDLAQGILQLHSKG---ILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~-~l~~~~~~~i~~qIa~gL~yLHs~g---IiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..+||+||++ |+|.+.+.. ... +++|..+++|+.++|.||+|||...   ||||||||+|||||++..+||+|||+|
T Consensus       146 ~~~LVYEym~nGsL~d~L~~-~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa  224 (361)
T KOG1187|consen  146 HRLLVYEYMPNGSLEDHLHG-KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLA  224 (361)
T ss_pred             eEEEEEEccCCCCHHHHhCC-CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCc
Confidence            5999999999 788787764 333 8999999999999999999999863   999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCc-CCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHH---HHHh
Q 007046          195 HLLLGIPLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYD---AVVR  267 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~-~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---~~ei~~---~i~~  267 (620)
                      +.....   ....... .||.+|+|||++.   .+..+.++||||||++++|++||+.|.....   ...+..   ....
T Consensus       225 ~~~~~~---~~~~~~~~~gt~gY~~PEy~~---~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~  298 (361)
T KOG1187|consen  225 KLGPEG---DTSVSTTVMGTFGYLAPEYAS---TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE  298 (361)
T ss_pred             ccCCcc---ccceeeecCCCCccCChhhhc---cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence            765320   1122222 8999999999985   3578999999999999999999998876432   111111   1111


Q ss_pred             c-cC----CCCCC-CCCC-----HHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          268 R-QE----IPPIP-SGLP-----PAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       268 ~-~~----~~~~p-~~~s-----~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      . ..    .+.+. ...+     ..+..+..+|++.+|.+||+|.++++.|+..
T Consensus       299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence            1 11    11122 2222     2355788999999999999999999988543

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=6.7e-37  Score=313.70  Aligned_cols=249  Identities=19%  Similarity=0.241  Sum_probs=196.9

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--CE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--GK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--~~  120 (620)
                      |++.++||+|+||.||+|.+..++      +.||+|.++.............+...+.+..+|+||+++++++.++  +.
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~------~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   74 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTG------KYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGR   74 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCC------cEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCc
Confidence            678999999999999999976554      4799999876432222211122233345555799999999999987  88


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +++||||++|++++.+.. ....+++..++.++.||+.||+|||+.+++||||||+||+++. +.+||+|||+++.....
T Consensus        75 ~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          75 LALVFELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence            999999999999888764 3457899999999999999999999999999999999999999 99999999999876432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--------  272 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--------  272 (620)
                          .......+|+.|+|||.+..  .+.++.++|+|||||++|||++|..||.+.+..+....+......+        
T Consensus       153 ----~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07831         153 ----PPYTEYISTRWYRAPECLLT--DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF  226 (282)
T ss_pred             ----CCcCCCCCCcccCChhHhhc--CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence                12233568999999998643  2346789999999999999999999998877665544443211100        


Q ss_pred             --------C-----------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------P-----------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------~-----------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                              .           ....++.++.++|.+||.+||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                    0           11356899999999999999999999999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-37  Score=317.18  Aligned_cols=255  Identities=20%  Similarity=0.302  Sum_probs=206.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||.|+||.||+|.+..++      ..||+|++..........+..+.  .+++.++|+||+++++++..+.
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~   75 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETG------LFAAAKIIQIESEEELEDFMVEI--DILSECKHPNIVGLYEAYFYEN   75 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCC------cEEEEEEEeeCCHHHHHHHHHHH--HHHHhCCCCceeEEEEEEecCC
Confidence            367999999999999999999976544      47999999766554444444443  2556678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||++|+.++.+.......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++.....
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~  155 (280)
T cd06611          76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS  155 (280)
T ss_pred             eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence            99999999996555544443456799999999999999999999999999999999999999999999999998876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPS  276 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~  276 (620)
                      .   ........||+.|+|||.+..+  ...+++.++|+||||+++|+|++|..||...+..+....+..... ....+.
T Consensus       156 ~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
T cd06611         156 T---LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPS  232 (280)
T ss_pred             c---ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcc
Confidence            1   1222345789999999997532  123577899999999999999999999988877766665543322 123456


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.++.++|.+||+.+|.+||++.++++
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         233 KWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            78999999999999999999999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=7.1e-37  Score=309.61  Aligned_cols=253  Identities=25%  Similarity=0.359  Sum_probs=204.8

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      +.||+|+||.||+|.+...+.   ....||||.+...... ....+..+.  ..++..+|+||+++++++.. ...++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGG---KVIPVAVKCLKSDKLSDIMDDFLKEA--AIMHSLDHENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCC---CceEEEEeecCCcccHHHHHHHHHHH--HHHhhcCCCCccceeEEEcC-CeEEEEE
Confidence            468999999999999865321   2346999999876653 233333332  25666789999999999887 8899999


Q ss_pred             ecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++ |+|.+.+.......+++..+..++.|++.||+|||+++++|+||||+||+++.++.+||+|||+++.+.......
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            9998 677777764332578999999999999999999999999999999999999999999999999998764322111


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      .......++..|+|||++...   .++.++|+|||||++|+|++ |..||...+..++...+.........+..+|..+.
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLRTR---TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIY  231 (257)
T ss_pred             ecccCCCCCceecCHHHhccc---CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHH
Confidence            122234678899999998643   57889999999999999999 99999888888877777655555556778899999


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          284 NVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +++.+||..+|++||++.++++.|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999998663

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=9.1e-37  Score=315.55  Aligned_cols=261  Identities=21%  Similarity=0.337  Sum_probs=207.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +|++.+.||+|+||.||+|++..... ......+|+|.+....... ...+..+.  .+++.++||||+++++.+..++.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~~~   77 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKG-RAGYTTVAVKMLKENASSSELRDLLSEF--NLLKQVNHPHVIKLYGACSQDGP   77 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCC-CCcceeEEEEecCCCCCHHHHHHHHHHH--HHHhhCCCCCEeeEEEEEecCCC
Confidence            47889999999999999998754332 2344579999987654332 22333332  25566789999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~----------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      .|++|||+. |+|.+.+....                      ...+++..++.++.|++.||.|||+.+++||||||+|
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n  157 (290)
T cd05045          78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN  157 (290)
T ss_pred             cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence            999999999 56666654321                      1357889999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      ||+++++.++|+|||+++........ .......++..|+|||++.+.   .++.++|+||||+++|||++ |..||.+.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~  233 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVTLGGNPYPGI  233 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHccC---CcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999865332111 112233567889999998643   58889999999999999999 99999988


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...++.+.+... .....+..++.++.+++.+||+.+|++||++.++++.|++.
T Consensus       234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         234 APERLFNLLKTG-YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            888877766543 34456788999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.7e-37  Score=313.64  Aligned_cols=250  Identities=24%  Similarity=0.371  Sum_probs=199.4

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      |++.+.||+|+||.||++.+..++      +.||+|++...............+..+++.++|+||+++++++......|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNG------QKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTT------EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCC------eEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccc
Confidence            899999999999999999987665      47999999887655444322122223455559999999999999999999


Q ss_pred             EEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       123 IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      +|||++++ ++.+.+.  ....+++..++.++.||+.||++||+++++|+||||+||+++.++.++|+|||++.....  
T Consensus        75 ~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--  150 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--  150 (260)
T ss_dssp             EEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--
T ss_pred             cccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            99999997 7777775  457889999999999999999999999999999999999999999999999999875411  


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccCCCC--CCC
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDAVVRRQEIPP--IPS  276 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e---i~~~i~~~~~~~~--~p~  276 (620)
                       .........+|+.|+|||.+.  ....++.++|+||||+++|+|++|..||......+   .............  ...
T Consensus       151 -~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (260)
T PF00069_consen  151 -NNENFNPFVGTPEYMAPEVLQ--QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR  227 (260)
T ss_dssp             -TTSEBSSSSSSGGGSCHHHHT--TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT
T ss_pred             -ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc
Confidence             223344567899999999986  12368889999999999999999999999874332   3322222111111  112


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.++.++|.+||+.||++||++.++++
T Consensus       228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  228 EKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             TSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            23489999999999999999999999986

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.3e-36  Score=309.23  Aligned_cols=255  Identities=24%  Similarity=0.387  Sum_probs=205.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.+.||+|+||.||+|.+..+.       .||+|.+....... ..+..+.  .+++.++|+|++++++++. 
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-------~~~lK~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~~~~~~-   71 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTT-------KVAIKTLKPGTMMP-EAFLQEA--QIMKKLRHDKLVPLYAVVS-   71 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCc-------eEEEEEcccCCccH-HHHHHHH--HHHHhCCCCCeeeEEEEEc-
Confidence            66788999999999999999999875432       59999987544321 2222222  2566678999999999875 


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|++|||++ |+|.+.+.......+++..+..++.|++.||.|||+.+++|+||||+||++++++.++|+|||+++.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~  151 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARL  151 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceE
Confidence            456899999998 5788877654445689999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......  .......++..|+|||.+.+   ..++.++|+||||+++|+|++ |..||.+....+....+... ..+..+
T Consensus       152 ~~~~~~--~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~  225 (260)
T cd05069         152 IEDNEY--TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMPCP  225 (260)
T ss_pred             ccCCcc--cccCCCccchhhCCHHHhcc---CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCC
Confidence            532211  11122346778999998864   358889999999999999999 99999988887777766543 344566


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++..+.+++.+||..||++||+++++++.|+.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            7899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=7.3e-37  Score=310.69  Aligned_cols=256  Identities=24%  Similarity=0.390  Sum_probs=206.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ++..++|++.++||+|+||.||+|.+...       ..||+|.++...... ..+..+.  .+++.++|+|++++++++.
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~-------~~~~~k~~~~~~~~~-~~~~~E~--~~l~~l~~~~i~~~~~~~~   71 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWNGN-------TKVAVKTLKPGTMSP-ESFLEEA--QIMKKLRHDKLVQLYAVVS   71 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEecCC-------ceeEEEEecCCCCCH-HHHHHHH--HHHHhcCCCceEEEEeEEC
Confidence            36788999999999999999999986433       359999997654432 2232322  2566679999999999875


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                       ....|++|||++ ++|.+.+.......+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.
T Consensus        72 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~  150 (260)
T cd05070          72 -EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLAR  150 (260)
T ss_pred             -CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeee
Confidence             456899999998 577776654344568999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+....  ........++..|+|||.+.+   ..++.++|+||||+++|+|++ |..||.+.+..+....+... ..++.
T Consensus       151 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  224 (260)
T cd05070         151 LIEDNE--YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPC  224 (260)
T ss_pred             eccCcc--cccccCCCCCccccChHHHhc---CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCC
Confidence            653321  111122345678999999853   368889999999999999999 99999988888877776543 34456


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +...+.++.+++.+||.++|++||++.++.+.|+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            77889999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-37  Score=328.43  Aligned_cols=250  Identities=22%  Similarity=0.266  Sum_probs=197.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      |--+++|++.+.||+|+||.||+|.+..++      ..||||.+.......  ...+..+.  .+++.++|+||++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~   82 (343)
T cd07878          11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLR------QKVAVKKLSRPFQSLIHARRTYREL--RLLKHMKHENVIGLLDV   82 (343)
T ss_pred             hhhhhhhhhheecccCCCeEEEEEEECCCC------CEEEEEEeCchhhhhHHHHHHHHHH--HHHHhcCCCchhhhhhh
Confidence            344688999999999999999999976655      479999997543221  12222222  35667799999999998


Q ss_pred             EEEC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVIN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      +...      ...|++||++.+++.+.+.   ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl  159 (343)
T cd07878          83 FTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI  159 (343)
T ss_pred             hcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE
Confidence            7543      3579999999888776653   457999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++....      ......||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+..+...
T Consensus       160 ~Dfg~~~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  231 (343)
T cd07878         160 LDFGLARQADD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV  231 (343)
T ss_pred             cCCccceecCC------CcCCccccccccCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            99999986532      23456799999999998642  35788999999999999999999999877655544443321


Q ss_pred             cCC---------------------CCC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEI---------------------PPI--------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~---------------------~~~--------p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...                     +..        ....++.+.+||.+||..||.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            110                     001        1245677899999999999999999999997

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=9.9e-37  Score=313.79  Aligned_cols=244  Identities=22%  Similarity=0.322  Sum_probs=195.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++........ ..+..+.  .+++.++|+||+++++++...+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~~   72 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTR------RILAVKVIPLDITVELQKQIMSEL--EILYKCDSPYIIGFYGAFFVEN   72 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCC------cEEEEEEEecCCChHHHHHHHHHH--HHHHhCCCCCeeeEEEEEEECC
Confidence            46889999999999999999976655      4799999876533322 2233332  2456678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..++||||+++.+++..     ..+++..+..++.|++.||.|||+.+|+|+||||+|||++.++.++|+|||++..+..
T Consensus        73 ~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          73 RISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             EEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            99999999997666544     2578899999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhccCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-------DEIYDAVVRRQEIP  272 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-------~ei~~~i~~~~~~~  272 (620)
                           .......||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.....       .+....+.......
T Consensus       148 -----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (279)
T cd06619         148 -----SIAKTYVGTNAYMAPERISGE---QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV  219 (279)
T ss_pred             -----ccccCCCCChhhcCceeecCC---CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC
Confidence                 223446899999999998644   578899999999999999999999965321       22233332222122


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......++++.+++.+||+.||++||+++++++
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            123457899999999999999999999999987

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=6.5e-37  Score=314.78  Aligned_cols=256  Identities=20%  Similarity=0.345  Sum_probs=202.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      ..+.|++.+.||+|+||.||+|.+..++      +.||+|++....... .. ...+...+.+..+|+||+++++++.. 
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~a~K~~~~~~~~~-~~-~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTEDEE-EE-IKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCC------cEEEEEEEecChHHH-HH-HHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            3467999999999999999999986655      479999986543222 22 22333345555689999999999853 


Q ss_pred             -----CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          118 -----NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       118 -----~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                           ...+|++|||+++ ++.+++.......+++..+..++.||+.||.|||+.+|+|+||||+||+++.++.++|+||
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~df  165 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF  165 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence                 4678999999984 7777776555667899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |+++.....   ........|++.|+|||.+....  ...++.++|+|||||++|||++|..||......+....+....
T Consensus       166 g~~~~~~~~---~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~  242 (282)
T cd06636         166 GVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP  242 (282)
T ss_pred             cchhhhhcc---ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC
Confidence            998765321   12234457999999999975321  3457889999999999999999999998766555444443333


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....+..++.++.++|.+||..||.+||++.+|++
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         243 PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            333334568999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.2e-36  Score=308.35  Aligned_cols=250  Identities=21%  Similarity=0.356  Sum_probs=204.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE-
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV-  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~-  116 (620)
                      |+.++|++.+.||+|+||.||+|...        +..||+|.+.....  ...+..+.  ..++.++|+|++++++++. 
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~--------~~~~~~k~~~~~~~--~~~~~~e~--~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYR--------GNKVAVKCIKNDAT--AQAFLAEA--SVMTQLRHSNLVQLLGVIVE   70 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEc--------CCcEEEEEeCCCch--HHHHHHHH--HHHHhCCCCCeeeEEEEEEc
Confidence            66789999999999999999999754        24699999865432  22232322  2556678999999999765 


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++..|++|||++ |+|.+.+.......+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~  150 (256)
T cd05082          71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTK  150 (256)
T ss_pred             CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccce
Confidence            4567999999998 577777765444568999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      ....      ......++..|+|||++...   .++.++|+|||||++|+|++ |+.||...+..++...+... ..+..
T Consensus       151 ~~~~------~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  220 (256)
T cd05082         151 EASS------TQDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDA  220 (256)
T ss_pred             eccc------cCCCCccceeecCHHHHccC---CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCC
Confidence            6532      11233456789999998643   58889999999999999998 99999988877777666543 34556


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..+++.+.+++.+||..+|++||++.++++.|..
T Consensus       221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            78899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.7e-36  Score=309.33  Aligned_cols=256  Identities=20%  Similarity=0.285  Sum_probs=199.8

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc--hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--  118 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--  118 (620)
                      |.+.+.||+|+||.||+|.+..++.    ...||+|.++...  ......+..+.  ..++.++|+||+++++++...  
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~----~~~~a~k~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~~~   74 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDS----ILKVAVKTMKIAICTRSEMEDFLSEA--VCMKEFDHPNVMRLIGVCLQTVE   74 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCC----eeeEEEEecccCcCCHHHHHHHHHHH--HHHHhCCCCCcceEEEEEccCCc
Confidence            3467899999999999999765442    1369999987543  22223333322  245667999999999987542  


Q ss_pred             ----CEEEEEEecCC-CChHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          119 ----GKICIIMKFYE-GSVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       119 ----~~~~IVmE~~~-GsLld~l~~~----~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                          ...+++|||++ |++.+.+...    ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.++|+
T Consensus        75 ~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  154 (272)
T cd05075          75 SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVA  154 (272)
T ss_pred             ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEEC
Confidence                24789999998 5666655322    12458899999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~  268 (620)
                      |||+++........ .......+++.|+|||++.+.   .++.++|+||||+++|||++ |..||.+....++...+...
T Consensus       155 Dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  230 (272)
T cd05075         155 DFGLSKKIYNGDYY-RQGRIAKMPVKWIAIESLADR---VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG  230 (272)
T ss_pred             CCCcccccCcccce-ecCCcccCCcccCCHHHccCC---CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999876432211 111223567889999998643   58889999999999999999 89999988888877776544


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      . ....+..++..+.++|.+||+.||++||++.++++.|..
T Consensus       231 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         231 N-RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             C-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            3 334567899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-36  Score=310.30  Aligned_cols=264  Identities=20%  Similarity=0.305  Sum_probs=211.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .++..+|++.+.||+|+||.||+|.+..+++  .....||+|.+..............+. ..++.++|+||+++++++.
T Consensus         3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~--~~~~~~aik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~   79 (279)
T cd05057           3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGE--KVKIPVAIKVLREETSPKANKEILDEA-YVMASVDHPHVVRLLGICL   79 (279)
T ss_pred             ccCHHHcEEcceecCCCCccEEEEEEecCCC--CcceEEEEEeccCCCCHHHHHHHHHHH-HHHHhCCCCCcceEEEEEe
Confidence            4667899999999999999999999876553  123579999987665432222222222 2456679999999999988


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      . ...++||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+.+++||||||+|||++.++.+||+|||+++
T Consensus        80 ~-~~~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~  157 (279)
T cd05057          80 S-SQVQLITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAK  157 (279)
T ss_pred             c-CceEEEEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence            6 78999999998 577766653 34568999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      ........ .......++..|+|||.+..   ..++.++|+||||+++||+++ |..||.+....++.+.+... .....
T Consensus       158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  232 (279)
T cd05057         158 LLDVDEKE-YHAEGGKVPIKWMALESILH---RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLPQ  232 (279)
T ss_pred             cccCcccc-eecCCCcccccccCHHHhhc---CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCCC
Confidence            76422111 11112234678999999853   368889999999999999999 99999998888887777643 34455


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..++.++.+++.+||..||.+||++.++++.|...
T Consensus       233 ~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         233 PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            677899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.4e-36  Score=312.76  Aligned_cols=259  Identities=21%  Similarity=0.264  Sum_probs=195.2

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--CE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--GK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--~~  120 (620)
                      |++.+.||+|+||.||++......  ...+..||+|+++............++. .+++.++|+||+++++++...  ..
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPAN--DGTGEMVAVKTLKRECGQQNTSGWKKEI-NILKTLYHENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             ceeceecccCCCcEEEEeeEcccc--CCCCceEEEEEeccccChHHHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCCce
Confidence            499999999999999998754322  2345689999997654322222222232 256667999999999988653  46


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|++|||+++ ++.+.+.   ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||+++....
T Consensus        83 ~~lv~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             EEEEecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            8999999995 5555553   34699999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHHHH
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------------EIYDAV  265 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~--------------ei~~~i  265 (620)
                      ............++..|+|||++.+.   .++.++|+||||+++|||+||..||......              ......
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKEN---KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL  236 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhccc---CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence            21111111223466789999998643   5788999999999999999999998643211              011111


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .......+.+..++.++.+++.+||+.+|++||+++++++.|+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            112223345678899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-38  Score=328.54  Aligned_cols=248  Identities=21%  Similarity=0.296  Sum_probs=217.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      =|.+.+.||+|-|+.|-+|++.-+++      .||||++.+.+.+....-.-..+..-+++..|||||+||++.....++
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGe------kVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKl   92 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGE------KVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKL   92 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccc------eeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceE
Confidence            48899999999999999999887775      799999998877665443333333467888999999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcccccC
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~~~~~  199 (620)
                      |||+|+=. |+|.|++.+ ....++++.+.+|+.||+.|+.|+|...++||||||+|+.+.+ -|-+||.|||++..+. 
T Consensus        93 yLiLELGD~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-  170 (864)
T KOG4717|consen   93 YLILELGDGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-  170 (864)
T ss_pred             EEEEEecCCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-
Confidence            99999988 699999875 4567999999999999999999999999999999999987754 5899999999987663 


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s-~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                         +.....+.||+..|-|||++.+.   .|+ +++||||||+|||.|++|++||...+..+.+.+|....+.  +|..+
T Consensus       171 ---PG~kL~TsCGSLAYSAPEILLGD---sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt--vPshv  242 (864)
T KOG4717|consen  171 ---PGKKLTTSCGSLAYSAPEILLGD---SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT--VPSHV  242 (864)
T ss_pred             ---CcchhhcccchhhccCchhhhcC---ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc--Cchhh
Confidence               45567889999999999999865   344 6899999999999999999999999999999999877654  68999


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++++||..||..||.+|-+.++|..
T Consensus       243 S~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  243 SKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            999999999999999999999999987

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-36  Score=311.25  Aligned_cols=264  Identities=20%  Similarity=0.324  Sum_probs=211.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |+.++|++.+.||+|+||.||+|+++.+.+ ....+.||+|.+..............+. .+++.++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~   79 (275)
T cd05046           2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEE-EGGETLVLVKALQKTKDENLQSEFRREL-DMFRKLSHKNVVRLLGLCRE   79 (275)
T ss_pred             CChHhceeeeeecccceeEEEEEEeccCCc-CCCcceEEEEccCCccchHHHHHHHHHH-HHHHhcCCcceeeeEEEECC
Confidence            456889999999999999999999876543 3345689999987654432222222232 24566799999999999988


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKG-------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~-------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      .+..|+||||++ |+|.+.+.....       ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.++|+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~  159 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVS  159 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEc
Confidence            889999999999 577667654331       168999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~  268 (620)
                      |||+++......  ........+++.|+|||.+.+.   .++.++|+||||+++|+|++ |..||...........+...
T Consensus       160 ~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~  234 (275)
T cd05046         160 LLSLSKDVYNSE--YYKLRNALIPLRWLAPEAVQED---DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG  234 (275)
T ss_pred             ccccccccCccc--ccccCCceeEEeecChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC
Confidence            999987543211  1122334677889999998643   57789999999999999999 88999887777777766655


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ......+..++..+.+++.+||..+|++||++.++++.|.
T Consensus       235 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            5444556789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.5e-36  Score=315.74  Aligned_cols=249  Identities=19%  Similarity=0.306  Sum_probs=201.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ..+|++.++||+|+||.||+|.+..++      +.||+|.+..........+..+.  ..++..+|+||+++++.+..+.
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~e~--~~l~~~~h~~v~~~~~~~~~~~   90 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIINEI--LVMRENKNPNIVNYLDSYLVGD   90 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCC------cEEEEEEEecCCcchHHHHHHHH--HHHHhCCCCCEeeEEEEEEeCC
Confidence            368999999999999999999876554      47999999765544444333333  2556679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++| ++.+.+.   ...+++.++..++.|++.||+|||+.+|+||||||+||+++.++.++|+|||++....
T Consensus        91 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~  167 (296)
T cd06654          91 ELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (296)
T ss_pred             EEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence            99999999985 5555553   3568999999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~  277 (620)
                      ..   ........|++.|+|||.+.+.   .++.++|+|||||++|+|++|+.||...+.......+.... .....+..
T Consensus       168 ~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (296)
T cd06654         168 PE---QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK  241 (296)
T ss_pred             cc---ccccCcccCCccccCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccc
Confidence            21   1122345789999999998643   57789999999999999999999998777654433332222 22234567


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+.+++.+||.+||++||++.++++
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             cCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            8899999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=4.5e-37  Score=316.01  Aligned_cols=250  Identities=20%  Similarity=0.293  Sum_probs=196.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|++..++      ..||+|.++......  ...+..+.  .+++.++|+||+++++++....
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g------~~~~~k~~~~~~~~~~~~~~~~~ei--~~l~~l~h~~i~~~~~~~~~~~   72 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALREI--CLLKELKHKNIVRLYDVLHSDK   72 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCC------cEEEEEEeecccccccCccchhHHH--HHHHhcCCCCeeeHHHHhccCC
Confidence            5899999999999999999987665      479999997543221  11122222  3556679999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+|++|||+++++.+.+.. ..+.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||+++.+..
T Consensus        73 ~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  151 (284)
T cd07839          73 KLTLVFEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI  151 (284)
T ss_pred             ceEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence            9999999999998887764 356799999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHhccCC-------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVDEIYDAVVRRQEI-------  271 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf-~~~~~~ei~~~i~~~~~~-------  271 (620)
                         .........+++.|+|||++.+.  ..++.++|+|||||++|+|+||..|| .+.+..+.+..+......       
T Consensus       152 ---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
T cd07839         152 ---PVRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP  226 (284)
T ss_pred             ---CCCCcCCCccccCCcChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence               12223345688999999998642  24688999999999999999988885 445544444433221100       


Q ss_pred             -----------C---------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 -----------P---------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 -----------~---------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                 +         .....+++++.++|.+||+.||.+|||++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                       0         112357899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=315.57  Aligned_cols=266  Identities=22%  Similarity=0.306  Sum_probs=204.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcC--------CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCcee
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTED--------CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed--------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      +..++|++.++||+|+||.||+|++..+++-        ......||+|.++.............+. ..++.++|+||+
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei-~~l~~l~h~~i~   80 (295)
T cd05097           2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI-KIMSRLKNPNII   80 (295)
T ss_pred             CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHH-HHHHhCCCCCcC
Confidence            4567899999999999999999987543210        1123469999998654433333233333 255667999999


Q ss_pred             EeEEEEEECCEEEEEEecCCC-ChHHHHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          110 WLQGISVINGKICIIMKFYEG-SVGDRMAQLK----------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~----------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      ++++++...+..|+||||++| +|.+.+....          ...+++..++.++.|++.||+|||+++++|+||||+||
T Consensus        81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni  160 (295)
T cd05097          81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC  160 (295)
T ss_pred             eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence            999999999999999999984 6666554211          02368889999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGR  256 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~~~  256 (620)
                      +++.++.+||+|||+++....... ........+++.|+|||++.+   +.++.++|+||||+++|+|++  |..||...
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~  236 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILL---GKFTTASDVWAFGVTLWEMFTLCKEQPYSLL  236 (295)
T ss_pred             EEcCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhcc---CCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence            999999999999999876532111 111223356789999999863   368899999999999999988  77899887


Q ss_pred             CHHHHHHHHHh------ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          257 SVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       257 ~~~ei~~~i~~------~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +..++...+..      .......+..+++.+.+|+.+||+.||++||++.+|++.|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         237 SDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             ChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            77666554432      11123345668899999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-36  Score=306.16  Aligned_cols=251  Identities=23%  Similarity=0.357  Sum_probs=207.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++.++|++.+.||+|+||.||+|...        ++.||+|.++.... ....+..+.  .+++..+|+||+++++++..
T Consensus         3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--------~~~v~iK~~~~~~~-~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~   71 (256)
T cd05039           3 INSKELKLGATIGKGEFGDVMLGDYR--------GQKVAVKCLKDDST-AAQAFLAEA--SVMTTLRHPNLVQLLGVVLQ   71 (256)
T ss_pred             cChhhccceeeeecCCCceEEEEEec--------CcEEEEEEeccchh-HHHHHHHHH--HHHHhcCCcceeeeEEEEcC
Confidence            56789999999999999999999753        35799999976544 233333332  25566789999999999998


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+..|+||||++ +++.+.+.......+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||+++.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~  151 (256)
T cd05039          72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE  151 (256)
T ss_pred             CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence            899999999999 5777777643334789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ...      ......++..|+|||++..   +.++.++|+||||+++|+|++ |..||...+..++...+... .....+
T Consensus       152 ~~~------~~~~~~~~~~~~ape~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~  221 (256)
T cd05039         152 ASQ------GQDSGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-YRMEAP  221 (256)
T ss_pred             ccc------ccccCCCcccccCchhhcC---CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-CCCCCc
Confidence            622      1112345678999999863   357889999999999999998 99999988887777766543 344567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+++++.++|.+||..+|++||++.++++.|.+
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            7889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=3.6e-36  Score=304.28  Aligned_cols=250  Identities=23%  Similarity=0.317  Sum_probs=207.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|+..+.||.|+||.||.+....++      +.+++|.+.....  .....+..+ . .+++.++|+||+++++++..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e-~-~~l~~~~h~~i~~~~~~~~~~~   72 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDD------SLVVWKEVNLTRLSEKERRDALNE-I-VILSLLQHPNIIAYYNHFMDDN   72 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCC------cEEEEEEEeecccchhHHHHHHHH-H-HHHHhCCCCCeeEEEeEEecCC
Confidence            5899999999999999999876554      4799999875432  222333332 2 3566679999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .++++|||++ |+|.+.+.......+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+||+|||+++...
T Consensus        73 ~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221          73 TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence            9999999998 577777765445678999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      ...   .......|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..+....+..... ...+..+
T Consensus       153 ~~~---~~~~~~~~~~~y~ape~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  225 (256)
T cd08221         153 SEY---SMAETVVGTPYYMSPELCQGV---KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-TPVVSVY  225 (256)
T ss_pred             ccc---ccccccCCCccccCHhhcCCC---CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-CCCcccc
Confidence            322   123445789999999998643   477889999999999999999999998888887777765443 3345778


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      +.++.+++.+||..+|.+||++.++++.
T Consensus       226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         226 SSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            9999999999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.7e-36  Score=312.93  Aligned_cols=265  Identities=19%  Similarity=0.316  Sum_probs=208.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++.++|++.+.||+|+||.||+|.+.... +...+..||+|++..............+. .+++.++|+||+++++++..
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~ei-~~l~~l~h~~iv~~~~~~~~   79 (288)
T cd05050           2 YPRNNIEYVRDIGQGAFGRVFQARAPGLL-PYEPFTMVAVKMLKEEASADMQADFQREA-ALMAEFDHPNIVKLLGVCAV   79 (288)
T ss_pred             CChHhceecccccccccccEEEEEEcccC-CCCcceeEEEEecCCCcCHHHHHHHHHHH-HHHHhcCCCchheEEEEEcC
Confidence            56788999999999999999999875321 11234689999997654333332222222 25566799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLK--------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF  176 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~--------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~  176 (620)
                      +...|++|||++ |+|.+.+....                    ...+++..++.++.||+.||+|||+++++||||||+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            999999999999 57766665321                    124788889999999999999999999999999999


Q ss_pred             cEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 007046          177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG  255 (620)
Q Consensus       177 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~  255 (620)
                      ||+++.++.++|+|||+++....... ........+++.|+|||.+.+.   .++.++|+|||||++|||++ |..||.+
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~~~~~p~~~  235 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADY-YKASENDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGMQPYYG  235 (288)
T ss_pred             heEecCCCceEECccccceecccCcc-ccccCCCccChhhcCHHHHhcC---CCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999876532211 1112223456789999998643   68889999999999999998 8899998


Q ss_pred             CCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+..++...+.... ....+..++.++.++|.+||+.+|++||++.|+++.|++
T Consensus       236 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         236 MAHEEVIYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             CCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            88888777765443 334567889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-36  Score=306.03  Aligned_cols=253  Identities=21%  Similarity=0.315  Sum_probs=200.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      ++||+|+||.||+|.+..++.   ....||+|.+..............+. ..++.++|+||+++++++. ....++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~-~~~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSG---KEVEVAVKTLKQEHIAAGKKEFLREA-SVMAQLDHPCIVRLIGVCK-GEPLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCC---CcceEEEEecccccchHHHHHHHHHH-HHHHhcCCCCeeeEEEEEc-CCceEEEEE
Confidence            479999999999998765431   23589999998665432222222222 2456678999999999876 456899999


Q ss_pred             cCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++ |+|.+.+..  ...+++..++.++.|++.||+|||+.+++|+||||+|||++.++.+||+|||+++..........
T Consensus        76 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~  153 (257)
T cd05060          76 LAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR  153 (257)
T ss_pred             eCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence            998 577777753  34789999999999999999999999999999999999999999999999999987643221111


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......++..|+|||.+.+   ..++.++|+||||+++|+|++ |..||...+..++...+... .....+..++..+++
T Consensus       154 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~  229 (257)
T cd05060         154 ATTAGRWPLKWYAPECINY---GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ERLPRPEECPQEIYS  229 (257)
T ss_pred             cccCccccccccCHHHhcC---CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcCCCCCCCCHHHHH
Confidence            1122234578999999864   358889999999999999998 99999988887777766544 344567789999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          285 VLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +|.+||..+|++||++.++++.|...
T Consensus       230 li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         230 IMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            99999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.9e-36  Score=316.18  Aligned_cols=250  Identities=20%  Similarity=0.279  Sum_probs=203.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ...|++.+.||+|+||.||+|++..++      +.||+|++......   ....+..+.  .+++..+|+||+++++++.
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~Ei--~~l~~l~h~niv~~~~~~~   85 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTN------EVVAIKKMSYSGKQSNEKWQDIIKEV--RFLQQLRHPNTIEYKGCYL   85 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCC------cEEEEEEEeccccCcHHHHHHHHHHH--HHHHhCCCCCEEEEEEEEE
Confidence            356999999999999999999976554      48999998644322   222232322  2566679999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..+..|+||||+.|++.+.+.. ....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++..
T Consensus        86 ~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~  164 (307)
T cd06607          86 REHTAWLVMEYCLGSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASL  164 (307)
T ss_pred             eCCeEEEEHHhhCCCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCccee
Confidence            9999999999999998888764 345789999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ..       ......|++.|+|||++.+...+.++.++|+||||+++|||++|..||...+.......+.........+.
T Consensus       165 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (307)
T cd06607         165 VS-------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSN  237 (307)
T ss_pred             cC-------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCch
Confidence            42       12345788999999998543345688899999999999999999999988777665555543322222345


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.++.++|.+||..||++||++.+++.
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            67899999999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-38  Score=339.44  Aligned_cols=261  Identities=23%  Similarity=0.300  Sum_probs=222.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .-.|..+++++.++||+|.||.|++|.|+....   +...||||+++.+... .+..|+.+..  .+..+.|+|+++|||
T Consensus       104 kclIpee~i~l~e~LG~GsFgvV~rg~Wt~psg---k~V~VAVKclr~d~l~~~mddflrEas--~M~~L~H~hliRLyG  178 (1039)
T KOG0199|consen  104 KCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSG---KHVNVAVKCLRDDSLNAIMDDFLREAS--HMLKLQHPHLIRLYG  178 (1039)
T ss_pred             ceeccHHHHHHHHHhcCcceeeEeeccccCCCC---cEEeEEEEeccCCccchhHHHHHHHHH--HHHhccCcceeEEee
Confidence            334778889999999999999999999987554   3357999999987765 4455555543  455678999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +..+ ....+|||+++ |+|+|.+.......|.......|+.||+.|+.||.++++|||||..+|+|+.....|||+|||
T Consensus       179 vVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFG  257 (1039)
T KOG0199|consen  179 VVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFG  257 (1039)
T ss_pred             eecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccc
Confidence            9876 68999999999 899999887566788999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |.+.+...+..........-.+.|+|||.++   ++.++.++|+|+|||++|||+| |+.||.+....++++.|. ..++
T Consensus       258 LmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr---h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~er  333 (1039)
T KOG0199|consen  258 LMRALGENEDMYVMAPQRKVPFAWCAPESLR---HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGER  333 (1039)
T ss_pred             ceeccCCCCcceEecCCCcCcccccCHhHhc---cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-cccc
Confidence            9998754332222222334567899999996   5589999999999999999999 999999999999999997 5555


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+-|..|++++++++++||..+|.+||++..|.+
T Consensus       334 LpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            6678999999999999999999999999999974

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-36  Score=305.40  Aligned_cols=252  Identities=23%  Similarity=0.379  Sum_probs=205.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||+|.+....   ..+..||+|.++.............+. ..+..++|+||+++++++.....+++|||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKD---GKTTEVAVKTLKEDASEEERKDFLKEA-RVMKKLGHPNVVRLLGVCTEEEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCC---CCCceEEeEeeccccchhHHHHHHHHH-HHHhhcCCCChheeeeeecCCCceEEEEE
Confidence            46999999999999986541   224589999998765544222222222 24455679999999999999999999999


Q ss_pred             cCC-CChHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          127 FYE-GSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       127 ~~~-GsLld~l~~~~-------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      |++ ++|.+.+....       ...+++..+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||.++...
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            996 67777765421       4779999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      .... ........+++.|+|||.+...   .++.++|+||||+++|+|++ |..||......++.+.+... .....+..
T Consensus       157 ~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~  231 (262)
T cd00192         157 DDDY-YRKKTGGKLPIRWMAPESLKDG---IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG-YRLPKPEY  231 (262)
T ss_pred             cccc-cccccCCCcCccccCHHHhccC---CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCcc
Confidence            3221 1223345688999999998643   68889999999999999999 69999998888888877653 34556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      +++++.+++.+||..||++||++.++++.|
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         232 CPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             CChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.3e-36  Score=312.74  Aligned_cols=246  Identities=19%  Similarity=0.293  Sum_probs=191.7

Q ss_pred             eeeccCceEEEEEEEcCCCc------------------CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCcee
Q 007046           48 RIGRGPFGEVWLATHYLSTE------------------DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~e------------------d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      .||+|+||.||+|....++.                  +......||+|++..........+.++.  .+++.++|+||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~--~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETA--SLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHH--HHHhcCCCCCee
Confidence            59999999999998653321                  1223456999999755433333333332  356778999999


Q ss_pred             EeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-----
Q 007046          110 WLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-----  184 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-----  184 (620)
                      ++++++..+...|+||||++|+.++.+.....+.+++..+..++.||+.||+|||+++|+||||||+|||++..+     
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            999999999999999999997666655544567899999999999999999999999999999999999997654     


Q ss_pred             --cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHH
Q 007046          185 --RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEI  261 (620)
Q Consensus       185 --~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ell-tG~~Pf~~~~~~ei  261 (620)
                        .++++|||++.....       .....+++.|+|||.+.+.  ..++.++|+||||+++|||+ +|..||......+.
T Consensus       160 ~~~~kl~d~g~~~~~~~-------~~~~~~~~~~~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  230 (274)
T cd05076         160 SPFIKLSDPGVSFTALS-------REERVERIPWIAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK  230 (274)
T ss_pred             cceeeecCCcccccccc-------ccccccCCcccCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence              489999998764421       1234678899999988642  35788999999999999985 69999988776655


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ...+..   ....+...++++.++|.+||+.+|++||++.++++.|
T Consensus       231 ~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         231 ERFYEK---KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHh---ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            443322   2234555678899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.3e-36  Score=310.48  Aligned_cols=247  Identities=21%  Similarity=0.317  Sum_probs=191.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcC------CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           47 HRIGRGPFGEVWLATHYLSTED------CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed------~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.||+|+||.||+|+......+      ......||+|.+..........+.++.  .++..++||||+++++++..+..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~--~~l~~l~hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETA--SMMRQVSHKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHH--HHHHhCCCCCEeeEEEEEecCCC
Confidence            4699999999999986533211      123456999998765443333333332  35667799999999999999889


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc-------EEEeccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-------AVLGDVGI  193 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~-------vkL~DFGl  193 (620)
                      .++||||++++.++.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.       ++++|||+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence            99999999976666665545677999999999999999999999999999999999999987664       89999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ell-tG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +.....       .....++..|||||.+..  ...++.++|||||||++|||+ +|..||......+..... ...  .
T Consensus       159 ~~~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~~~--~  226 (262)
T cd05077         159 PITVLS-------RQECVERIPWIAPECVED--SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY-EGQ--C  226 (262)
T ss_pred             CccccC-------cccccccccccChhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH-hcC--c
Confidence            865421       223468899999998752  235788999999999999997 589998876655443322 221  1


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ......+.++.+||.+||+.||++||++.+|++.+
T Consensus       227 ~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         227 MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            23344568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=3.9e-36  Score=305.23  Aligned_cols=255  Identities=22%  Similarity=0.426  Sum_probs=203.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.++....  .. ...+..+.  .+++..+|+||+++++++..
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~ei--~~l~~~~~~~i~~~~~~~~~   73 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDG------RVVALKKVQIFEMMDAKARQDCLKEI--DLLKQLDHPNVIKYLASFIE   73 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCC------CEEEEEEeecccccchhhHHHHHHHH--HHHHhCCCCCeeeeeeeeec
Confidence            57999999999999999999976544      4799999874322  11 22222222  35566799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .+..++||||++ |+|.+.+...  ....+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~  153 (267)
T cd08224          74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLG  153 (267)
T ss_pred             CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEecccee
Confidence            999999999999 5776666542  2356899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhccCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIP  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~--~~ei~~~i~~~~~~~  272 (620)
                      +.+...   ........|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||....  ..+..+.+..... +
T Consensus       154 ~~~~~~---~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~  226 (267)
T cd08224         154 RFFSSK---TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY-P  226 (267)
T ss_pred             eeccCC---CcccceecCCccccCHHHhccC---CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC-C
Confidence            765332   1122345689999999998643   58889999999999999999999996543  3345555444333 3


Q ss_pred             CCCC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPS-GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~-~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.+. .++.++.++|.+||..+|++||++.+|++.|+..
T Consensus       227 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         227 PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            3344 7889999999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3e-36  Score=309.57  Aligned_cols=266  Identities=18%  Similarity=0.235  Sum_probs=210.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|+.++|++.+.||+|+||.||+|.+..+.  ......||+|.+..............+. ..++.++|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~--~~~~~~v~~k~~~~~~~~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~   78 (280)
T cd05043           2 AISRDRVTLSDLLQEGTFGRIFYGILIDEK--PGKEEEVFVKTVKDHASEIQVTLLLQES-CLLYGLSHQNILPILHVCI   78 (280)
T ss_pred             ccchhheEEeeeecccCCceEEEEEEecCC--CCceeEEEEEEccCCCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEe
Confidence            367889999999999999999999987632  1234689999987544333233222232 2456679999999999877


Q ss_pred             E-CCEEEEEEecCC-CChHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          117 I-NGKICIIMKFYE-GSVGDRMAQLKG------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       117 ~-~~~~~IVmE~~~-GsLld~l~~~~~------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      . +...++++||++ |++.+.+.....      ..+++..++.++.||+.||+|||+++++||||||+||+++.++.+||
T Consensus        79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl  158 (280)
T cd05043          79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKI  158 (280)
T ss_pred             cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEE
Confidence            6 467899999998 677666654322      46899999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|||+++.+..... ........++..|+|||++.+.   .++.++|+||||+++||+++ |+.||...+..++...+..
T Consensus       159 ~d~g~~~~~~~~~~-~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  234 (280)
T cd05043         159 TDNALSRDLFPMDY-HCLGDNENRPVKWMALESLVNK---EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD  234 (280)
T ss_pred             CCCCCcccccCCce-EEeCCCCCcchhccCHHHHhcC---CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc
Confidence            99999986532211 1111223567789999998643   57889999999999999999 9999998888777766654


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      . .....+..+++++.+++.+||..||++||++.++++.|...
T Consensus       235 ~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         235 G-YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             C-CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            3 33345667899999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=3.1e-36  Score=312.80  Aligned_cols=265  Identities=21%  Similarity=0.308  Sum_probs=202.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCc----------CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCce
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTE----------DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI  108 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~e----------d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nI  108 (620)
                      ..++|++.++||+|+||.||++.+.....          .......||+|+++.............+. ..++.++|+||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~-~~l~~l~~~~i   81 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEI-KIMSRLKDPNI   81 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCc
Confidence            45689999999999999999997654321          11234579999997654333322222222 24566799999


Q ss_pred             eEeEEEEEECCEEEEEEecCC-CChHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          109 CWLQGISVINGKICIIMKFYE-GSVGDRMAQLKG---------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       109 v~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~---------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      +++++++..++..|++|||++ |+|.+++.....         ..+++..+..++.||+.||+|||+.+++|+||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni  161 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC  161 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence            999999999999999999998 577666653221         2467789999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGR  256 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~~~  256 (620)
                      |++.++.++|+|||+++.+..... ........+++.|++||...+   +.++.++|+|||||++|||++  |..||...
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~---~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~  237 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMSWESILL---GKFTTASDVWAFGVTLWEILTLCKEQPYSQL  237 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcc-eeccCcCcCccccCCHHHHhc---CCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence            999999999999999876532211 111122345788999998753   468899999999999999998  78999877


Q ss_pred             CHHHHHHHHHh------ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          257 SVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       257 ~~~ei~~~i~~------~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +..+.......      .....+.+..+++.+.+++.+||+.||++||++.+|++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            76665544321      11122345678899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.9e-36  Score=305.10  Aligned_cols=254  Identities=19%  Similarity=0.303  Sum_probs=196.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEE-ECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISV-INGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~-~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+....   .....||||.+...... ....+..+.  .+++.++|+||+++++++. .++..|++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSD---GQKIHCAVKSLNRITDLEEVEQFLKEG--IIMKDFSHPNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCC---CceEEEEEEecCccCCHHHHHHHHHHH--HHHccCCCCCcceEEEEeecCCCCcEEE
Confidence            36899999999999875432   23467999998643322 223333322  3567789999999999876 45668999


Q ss_pred             EecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||+. |++.+.+.. ....+++..++.++.||+.||.|||+.+++||||||+|||++.++.+||+|||+++........
T Consensus        76 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          76 LPYMKHGDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence            99998 566666543 3455678888999999999999999999999999999999999999999999999765332111


Q ss_pred             -CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHH
Q 007046          204 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  281 (620)
Q Consensus       204 -~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~  281 (620)
                       ........+++.|+|||.+.+   ..++.++|+||||+++|||++ |.+||...+..++...+... ..+..+..+++.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  230 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-RRLLQPEYCPDP  230 (262)
T ss_pred             eecccccCcCCccccChhHhcc---CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCcCCHH
Confidence             111123356788999999864   368889999999999999999 56778877777776666443 344456778999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          282 VENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.+++.+||..+|++||++.++++.|+..
T Consensus       231 ~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         231 LYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            99999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-36  Score=304.85  Aligned_cols=257  Identities=25%  Similarity=0.392  Sum_probs=208.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.++||+|+||.||+|.+..+       +.||||.+....... ..+..+.  ..++.++|+||+++++++.
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~-------~~~~vK~~~~~~~~~-~~~~~e~--~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGT-------TKVAVKTLKPGTMSP-EAFLQEA--QIMKKLRHDKLVQLYAVCS   71 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCC-------ceEEEEEecCCccCH-HHHHHHH--HHHhhCCCCCEeeeeeeee
Confidence            36788999999999999999999986432       369999997644322 2233322  2556678999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .....++||||++ ++|.+.+.......+++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||+++
T Consensus        72 ~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~  151 (261)
T cd05034          72 EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLAR  151 (261)
T ss_pred             cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccce
Confidence            8889999999998 567777755444678999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+....  ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |+.||.+.+....++.+.... ....
T Consensus       152 ~~~~~~--~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~  225 (261)
T cd05034         152 LIEDDE--YTAREGAKFPIKWTAPEAANYG---RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-RMPR  225 (261)
T ss_pred             eccchh--hhhhhccCCCccccCHHHhccC---CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCC
Confidence            663211  0111122356789999998643   57889999999999999999 999999888887777775433 3445


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||..+|++||+++++++.|+.
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            67789999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-37  Score=330.82  Aligned_cols=264  Identities=20%  Similarity=0.363  Sum_probs=225.9

Q ss_pred             CCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeE
Q 007046           31 SNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICW  110 (620)
Q Consensus        31 s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~  110 (620)
                      ++.....++..++...++||-|.||.||.|.|+.-.      ..||||.|+.+.. ..++|+.+.  .+++-++|||+|+
T Consensus       257 Pn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkys------lTvAVKtLKEDtM-eveEFLkEA--AvMKeikHpNLVq  327 (1157)
T KOG4278|consen  257 PNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTM-EVEEFLKEA--AVMKEIKHPNLVQ  327 (1157)
T ss_pred             CCcchhhccchheeeeeccCCCcccceeeeeeeccc------eeeehhhhhhcch-hHHHHHHHH--HHHHhhcCccHHH
Confidence            344567799999999999999999999999998654      4799999975543 445565554  4778899999999


Q ss_pred             eEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          111 LQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       111 l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      |+|+|..+..+|||+|||. |+|+|++.+.....++....+.++.||..|++||..+++|||||..+|+|+.++..+|++
T Consensus       328 LLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvA  407 (1157)
T KOG4278|consen  328 LLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVA  407 (1157)
T ss_pred             HhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEee
Confidence            9999999999999999998 999999987666677778888999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~  268 (620)
                      ||||++++.+......  ....-...|.|||.+.   +..++.++|||+||++|||+.| |-.||.+.+..++|..+.++
T Consensus       408 DFGLsRlMtgDTYTAH--AGAKFPIKWTAPEsLA---yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg  482 (1157)
T KOG4278|consen  408 DFGLSRLMTGDTYTAH--AGAKFPIKWTAPESLA---YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG  482 (1157)
T ss_pred             ccchhhhhcCCceecc--cCccCcccccCccccc---ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence            9999999865322111  1122356899999985   4479999999999999999999 99999999999999977665


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      . +-.-|.+||+.+.+|++.||+.+|.+||++.||.+.|+.
T Consensus       483 y-RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  483 Y-RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET  522 (1157)
T ss_pred             c-cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence            5 445699999999999999999999999999999887665

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3.5e-36  Score=307.06  Aligned_cols=253  Identities=27%  Similarity=0.402  Sum_probs=200.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh----HHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED----RMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~----~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      |.+|++.+.||+|+||.||+|.+..++      ..||+|.+......    ........+. .+++.++|+||+++++++
T Consensus         1 ~~~~~~~~~lg~g~~g~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~   73 (266)
T cd06651           1 PINWRRGKLLGQGAFGRVYLCYDVDTG------RELAAKQVQFDPESPETSKEVSALECEI-QLLKNLQHERIVQYYGCL   73 (266)
T ss_pred             CCCccccceecCCCCEEEEEEEEcCCC------cEEEEEEeecCcCCchhHHHHHHHHHHH-HHHHHcCCCCeeeEEEEE
Confidence            457999999999999999999876554      48999998654321    1111222222 256667899999999988


Q ss_pred             EE--CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VI--NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~--~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ..  ...++++|||+++ +|.+.+.  ....+++...+.++.|++.||+|||+.+|+|+||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg  151 (266)
T cd06651          74 RDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG  151 (266)
T ss_pred             EcCCCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCC
Confidence            75  3678999999985 6666664  34568999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++.+..............++..|+|||.+.+.   .++.++|+|||||++|||++|+.||......+....+......+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~  228 (266)
T cd06651         152 ASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE---GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP  228 (266)
T ss_pred             CccccccccccCCccccCCccccccCHHHhCCC---CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC
Confidence            987653222122222345689999999998643   57889999999999999999999998776655555554444456


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++..+++.+++++ +||..+|++||+++++++
T Consensus       229 ~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         229 QLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            67778899999999 688899999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-36  Score=327.24  Aligned_cols=251  Identities=25%  Similarity=0.324  Sum_probs=197.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +-..+|++.+.||+|+||.||+|......    .+..||+|.+.....     . .++. .+++.++|+||+++++++..
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~----~~~~v~vK~~~~~~~-----~-~~E~-~il~~l~h~~iv~~~~~~~~  157 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDE----QRKKVIVKAVTGGKT-----P-GREI-DILKTISHRAIINLIHAYRW  157 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCc----cceeEEEEecccccc-----H-HHHH-HHHHhcCCCCccceeeeEee
Confidence            34467999999999999999999864322    346899999864321     1 1222 25566799999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ....|++||++.+++.+.+.  ....+++.+++.++.||+.||.|||+++|+||||||+|||++.++.++|+|||+++.+
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~  235 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL  235 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence            99999999999999988884  4578999999999999999999999999999999999999999999999999999765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcc-----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQ-----  269 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---ei~~~i~~~~-----  269 (620)
                      ..... ........||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+....   ..+..+....     
T Consensus       236 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~  311 (392)
T PHA03207        236 DAHPD-TPQCYGWSGTLETNSPELLALD---PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL  311 (392)
T ss_pred             Ccccc-cccccccccccCccCHhHhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcc
Confidence            43211 1122346799999999998643   6888999999999999999999999765321   1111111110     


Q ss_pred             --------------------CCC--CCC-----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 --------------------EIP--PIP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 --------------------~~~--~~p-----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          ..+  ..+     ..++.+++++|.+||..||++||++.+++.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        312 EFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             ccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence                                000  011     245778999999999999999999999998

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.9e-36  Score=319.44  Aligned_cols=253  Identities=15%  Similarity=0.158  Sum_probs=193.2

Q ss_pred             EEeeeecc--CceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           45 LRHRIGRG--PFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        45 i~~~IG~G--~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      +++.||+|  +|++||++.++.+++      .||+|.++.... ......+.++. .+++.++||||+++++++..++..
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~------~vaiK~~~~~~~~~~~~~~~~~e~-~~l~~l~hpniv~~~~~~~~~~~~   74 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGE------YVTVRRINLEACTNEMVTFLQGEL-HVSKLFNHPNIVPYRATFIADNEL   74 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCc------EEEEEEechhhccHHHHHHHHHHH-HHHHhcCCCCeeeEEEEEEECCEE
Confidence            56789999  789999999877664      799999976533 22333333333 366777999999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |+||||++ |++.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.++++||+.+......
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          75 WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence            99999998 56767765434456899999999999999999999999999999999999999999999999875543221


Q ss_pred             CCCC----CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-----
Q 007046          201 PLPS----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-----  271 (620)
Q Consensus       201 ~~~~----~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-----  271 (620)
                      ....    .......++..|||||++.+. ...++.++|+|||||++|||++|..||......+...........     
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  233 (327)
T cd08227         155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT  233 (327)
T ss_pred             cccccccccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence            1100    111223578889999998642 135888999999999999999999999876544433222211100     


Q ss_pred             ---------------------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ---------------------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ---------------------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                             ......+++++.+|+.+||+.||++|||++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                                                   0011235778999999999999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-36  Score=308.40  Aligned_cols=252  Identities=19%  Similarity=0.264  Sum_probs=198.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||+|++..++.    ...+|+|.++.............+...+.+..+|+||+++++++...+..|++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGL----RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCC----eeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence            358999999999999866543    1357999987543333222233333345555589999999999999999999999


Q ss_pred             cCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          127 FYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       127 ~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      |++ |+|.+++....              ...+++..++.++.|++.||+|||+.+++||||||+|||++.++.+||+||
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df  156 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF  156 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence            998 67777765321              135789999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++....    .........++.|+|||++...   .++.++|+||||+++|||++ |..||.+.+..+..+.+... .
T Consensus       157 gl~~~~~~----~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~  228 (270)
T cd05047         157 GLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-Y  228 (270)
T ss_pred             CCccccch----hhhccCCCCccccCChHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-C
Confidence            99863321    0111122346789999998543   68889999999999999997 99999888877777766443 3


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ....+..++.++.+++.+||..||.+||++.+++..|...
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         229 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            3445677899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5.3e-36  Score=305.25  Aligned_cols=253  Identities=26%  Similarity=0.370  Sum_probs=200.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch----hHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE----DRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~----~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      +.+|++.+.||+|+||.||+|.+..++      ..||||.+.....    .........+. ..++.++|+||+++++++
T Consensus         1 ~~~~~~~~~l~~g~~g~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~   73 (265)
T cd06652           1 PTNWRLGKLLGQGAFGRVYLCYDADTG------RELAVKQVQFDPESPETSKEVNALECEI-QLLKNLLHERIVQYYGCL   73 (265)
T ss_pred             CCcceEeeEEecCCceEEEEEEEcCCC------cEEEEEEeecCcCCcccHHHHHHHHHHH-HHHHhcCCCCeeeEEeEe
Confidence            568999999999999999999976554      4899999864321    11112222222 255667999999999988


Q ss_pred             EE--CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VI--NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~--~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ..  ...++++|||++| +|.+.+.  +...+++..++.++.|++.||+|||+.+++|+||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg  151 (265)
T cd06652          74 RDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG  151 (265)
T ss_pred             ccCCCceEEEEEEecCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCc
Confidence            76  3568999999985 6666654  34568999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++................||..|+|||.+.+.   .++.++|+||||+++|+|++|+.||...........+......+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  228 (265)
T cd06652         152 ASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE---GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP  228 (265)
T ss_pred             cccccccccccccccccCCCCccccChhhhcCC---CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC
Confidence            988654322222233445799999999998643   57889999999999999999999998776555555554444455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..|..++..+.++|.+|+. +|++||+++++++
T Consensus       229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            5677888999999999995 9999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.2e-36  Score=308.39  Aligned_cols=262  Identities=21%  Similarity=0.364  Sum_probs=198.3

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +-.+|++.+.||+|+||.||+|......  ...+..||+|.++.........+..+..  +++.++|+||+++++++...
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~v~iK~~~~~~~~~~~~~~~e~~--~l~~l~h~~iv~~~~~~~~~   77 (284)
T cd05081           2 EERHLKFIQQLGKGNFGSVELCRYDPLQ--DNTGEVVAVKKLQHSTAEHLRDFEREIE--ILKSLQHDNIVKYKGVCYSA   77 (284)
T ss_pred             ccccceeeeeccCCCCceEEEEEecCCc--CCCCcEEEEEEeccCCHHHHHHHHHHHH--HHHhCCCCCeeEEEEEEccC
Confidence            3468999999999999999999854221  1234689999997665544444444332  45667999999999987543


Q ss_pred             --CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          119 --GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       119 --~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                        ..+|+||||++ |+|.+.+.. ....+++..++.++.||+.||+|||++|++||||||+||+++.++.++|+|||+++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          78 GRRNLRLVMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             CCCceEEEEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccc
Confidence              46899999998 567666653 34568999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----------------
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----------------  259 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~----------------  259 (620)
                      ................++..|+|||++.+.   .++.++|+||||+++|||++|..|+......                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY  233 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHHhccC---CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence            764321111111112344569999998643   5788999999999999999987775432211                


Q ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+. .+.......+.+..++.++.+|+.+||..+|++||++.+|++.|..
T Consensus       234 ~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         234 HLI-ELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HHH-HHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            111 1222333344567789999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-38  Score=338.87  Aligned_cols=254  Identities=21%  Similarity=0.330  Sum_probs=216.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|.|+..||.|+||.||+|..+.++      ...|.|++...+......++-++. ++..| +||+||+|++.|..++.
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~------~lAAaKvIetkseEELEDylVEIe-ILa~C-dHP~ivkLl~ayy~enk  103 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETK------LLAAAKVIETKSEEELEDYLVEIE-ILAEC-DHPVIVKLLSAYYFENK  103 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccch------hhhhhhhhcccchhHHhhhhhhhh-hhhcC-CChHHHHHHHHHhccCc
Confidence            56999999999999999999977554      368899998777766666665543 34444 69999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      ++|+.|||+|+-.|.+.---+..|.+.++..+++|++.||.|||+++|||||||..|||+..+|.++|+|||.+-.... 
T Consensus       104 LwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-  182 (1187)
T KOG0579|consen  104 LWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-  182 (1187)
T ss_pred             eEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-
Confidence            9999999998777776554678899999999999999999999999999999999999999999999999998754422 


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSG  277 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~  277 (620)
                        ......+++|||.|||||++.++  ...+|++++||||||++|.||..+.+|....++..++-+|.+... ....|..
T Consensus       183 --t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~  260 (1187)
T KOG0579|consen  183 --TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSH  260 (1187)
T ss_pred             --HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcch
Confidence              23345678999999999998654  245899999999999999999999999999999988877764432 2235788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+.+|+.+||.+||..||++.+|++
T Consensus       261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  261 WSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            9999999999999999999999999987

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.4e-36  Score=310.38  Aligned_cols=262  Identities=21%  Similarity=0.316  Sum_probs=198.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      ..-|++++.||+|+||.||+|.....+  ...+..||+|.++............++. .+++..+|+||+++++++... 
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~va~K~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~   79 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEG--DNTGEQVAVKSLKPESGGNHIADLKKEI-EILRNLYHENIVKYKGICTEDG   79 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCC--CCccceEEEEEcCccccHHHHHHHHHHH-HHHHhCCCCCeeeeeeEEecCC
Confidence            455889999999999999999864322  2345689999997665433333333333 256677999999999998775 


Q ss_pred             -CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          119 -GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       119 -~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                       ...++||||++| +|.+.+.. ....+++..++.++.||+.||+|||++|++||||||+||+++.++.++|+|||+++.
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence             568999999985 55555533 345689999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------------CHHHH
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------------SVDEI  261 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---------------~~~ei  261 (620)
                      +..............++..|+|||++.+.   .++.++|+||||+++|||+++..|+...               .....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQS---KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL  235 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhccC---CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence            64322111122345677889999998643   5788999999999999999987664321               01111


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+ ......+.+..++.++.+|+.+||+.||++||++.++++.|+.
T Consensus       236 ~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         236 VRVL-EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HHHH-HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            1222 2223344567799999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=4.7e-36  Score=308.06  Aligned_cols=252  Identities=19%  Similarity=0.278  Sum_probs=198.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++...... ........+. .+++..+|+||+++++++....
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~~~~~~~~~~~   73 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETG------QIVAIKKFVESEDDPVIKKIALREI-RMLKQLKHPNLVNLIEVFRRKR   73 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCC------cEEEEEEEeecccCccccHHHHHHH-HHHHhCCCCCEeeeeeEEeeCC
Confidence            57999999999999999999976554      48999998654321 1112222222 2556678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..++||||+++++++.+.. ....+++..++.++.||+.||+|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus        74 ~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847          74 KLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             EEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            9999999999888777654 445789999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC---------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------  270 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~---------  270 (620)
                      ..   .......++..|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+.....         
T Consensus       153 ~~---~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd07847         153 PG---DDYTDYVATRWYRAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI  227 (286)
T ss_pred             Cc---ccccCcccccccCCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            21   122334688999999998642  2477899999999999999999999988766544433321100         


Q ss_pred             -----------CCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -----------IPP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -----------~~~---------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                 .+.         ....++..+.+|+.+||..+|++||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                       000         01356888999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-37  Score=341.83  Aligned_cols=262  Identities=19%  Similarity=0.252  Sum_probs=209.7

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..-++++.+.|.+|||+.||+|++...+      ..||+|++-...+.. .....++..++..+.+|+|||.+++...
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~------~~~AlKrm~~~de~~-L~~v~~EI~~MK~L~gh~nIV~yidss~  105 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGG------KKYALKRMYVNDEEA-LNAVKREIDIMKLLSGHKNIVSYIDSSA  105 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCC------ceeeeeeeecCCHHH-HHHHHHHHHHHHHhcCCCceeeEecccc
Confidence            477788999999999999999999987654      479999986654444 4444445556677778999999999432


Q ss_pred             E----C---CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEccCCcE
Q 007046          117 I----N---GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       117 ~----~---~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~~~~v  186 (620)
                      .    +   -.++|.||||. |+|.|++.......|++.++++|++|+|+|+++||...  |||||||-|||||+.+++.
T Consensus       106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~  185 (738)
T KOG1989|consen  106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNY  185 (738)
T ss_pred             ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCE
Confidence            2    1   24889999999 79999998766777999999999999999999999997  9999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCC------CCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDL------PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE  260 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~------~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e  260 (620)
                      ||||||.+..-..........      .....|+.|.|||++.--..-+++.|+|||+|||+||-|+....||.....-.
T Consensus       186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la  265 (738)
T KOG1989|consen  186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA  265 (738)
T ss_pred             EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee
Confidence            999999886543211100000      12247999999999974444578999999999999999999999998764443


Q ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       261 i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      |    .......+..+.++..+.+||+.||+.||.+||++.+++..+..
T Consensus       266 I----lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  266 I----LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             E----EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence            3    33444444446899999999999999999999999999986655

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1e-35  Score=309.83  Aligned_cols=249  Identities=20%  Similarity=0.304  Sum_probs=201.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      .+|++.+.||.|+||.||+|.+..++      +.||+|.+..........+..+.  ..++.++|+||+++++++...+.
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~~~   90 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATG------QEVAIKQINLQKQPKKELIINEI--LVMKELKNPNIVNFLDSFLVGDE   90 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCC------cEEEEEEEecccCchHHHHHHHH--HHHHhcCCCceeeeeeeEecCce
Confidence            56999999999999999999876554      47999998765444333333332  35566799999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +|+||||++|.++..+.  ....+++..+..++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++......
T Consensus        91 ~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          91 LFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             EEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            99999999965444443  3456899999999999999999999999999999999999999999999999998765321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLP  279 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~~s  279 (620)
                         ........|++.|+|||.+.+.   .++.++|+|||||++|+|++|..||...+..+....+.... .....+..++
T Consensus       169 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T cd06655         169 ---QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLS  242 (296)
T ss_pred             ---cccCCCcCCCccccCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCC
Confidence               1122345789999999998643   57889999999999999999999998877655544443322 2223566789


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.+.++|.+||..||++||++.++++
T Consensus       243 ~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         243 PIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            99999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=4.7e-36  Score=312.94  Aligned_cols=263  Identities=21%  Similarity=0.340  Sum_probs=207.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..++|+..+.||+|+||.||+|.+..+++.  ....||+|.+..............+. .+++.++|+||+++++++.
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~-~~~~~l~h~niv~~~~~~~   79 (303)
T cd05110           3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGET--VKIPVAIKILNETTGPKANVEFMDEA-LIMASMDHPHLVRLLGVCL   79 (303)
T ss_pred             ccchhhceeccccccCCCccEEEEEEecCCCc--ceeeEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCcccEEEEEc
Confidence            36678899999999999999999998766542  12468999987654333222222222 3566679999999999986


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .. ..++++||++ |++.+.+.. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        80 ~~-~~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~  157 (303)
T cd05110          80 SP-TIQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (303)
T ss_pred             CC-CceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence            54 5789999998 677777653 34568999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+..... ........++..|+|||++.+.   .++.++|+||||+++|||++ |..||.+....+..+.+. ....+..
T Consensus       158 ~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~---~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~  232 (303)
T cd05110         158 LLEGDEK-EYNADGGKMPIKWMALECIHYR---KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQ  232 (303)
T ss_pred             cccCccc-ccccCCCccccccCCHHHhccC---CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCC
Confidence            7643211 1112234567899999998643   68889999999999999998 999998877766655554 3344445


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..++.++.+++.+||..+|++||++.++++.|..
T Consensus       233 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~  267 (303)
T cd05110         233 PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR  267 (303)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            67789999999999999999999999999987776

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.8e-37  Score=311.18  Aligned_cols=247  Identities=18%  Similarity=0.262  Sum_probs=191.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      +.||+|+||.||+|.+...+.. ......||+|.+..........+.++.  .+++..+|+||+++++++..++..++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~--~~l~~~~h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAA--SMMSQLSHKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHH--HHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence            4699999999999998654432 223456899998654333223333322  3566789999999999999989999999


Q ss_pred             ecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc--------EEEeccCCcccc
Q 007046          126 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--------AVLGDVGIPHLL  197 (620)
Q Consensus       126 E~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~--------vkL~DFGla~~~  197 (620)
                      ||++++.++.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.        ++++|||++...
T Consensus        79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence            999964444443334457899999999999999999999999999999999999987765        689999988654


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      .       ......+++.|+|||++.+.  ..++.++|+||||+++|||++| ..||...+.........   ....+|.
T Consensus       159 ~-------~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~---~~~~~~~  226 (258)
T cd05078         159 L-------PKEILLERIPWVPPECIENP--QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE---DRHQLPA  226 (258)
T ss_pred             C-------CchhccccCCccCchhccCC--CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH---ccccCCC
Confidence            2       12335688999999998642  2478899999999999999998 57776666554433222   2344666


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ..+.++.+++.+||+.||++||++++|++.|
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         227 PKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            7789999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-37  Score=317.77  Aligned_cols=246  Identities=21%  Similarity=0.286  Sum_probs=203.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--C
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--G  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--~  119 (620)
                      .|.-.+.+|+|+||.||+|....+.+      .||||..-.+....     .++. .+++.++|||||++..+|...  .
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~------~vAIKKv~~d~r~k-----nrEl-~im~~l~HpNIV~L~~~f~~~~~~   92 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEE------EVAIKKVLQDKRYK-----NREL-QIMRKLDHPNIVRLLYFFSSSTES   92 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCc------eeEEEEecCCCCcC-----cHHH-HHHHhcCCcCeeeEEEEEEecCCC
Confidence            48888999999999999999887743      79999986655422     2233 245578999999999988753  2


Q ss_pred             ---EEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEeccCC
Q 007046          120 ---KICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGI  193 (620)
Q Consensus       120 ---~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~DFGl  193 (620)
                         +..+||||++.+|.+.+.+.  .+.+++.-.+.-|..||.+||.|||+.||+||||||+|+|+|.+ |.+||||||.
T Consensus        93 d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGS  172 (364)
T KOG0658|consen   93 DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGS  172 (364)
T ss_pred             chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCc
Confidence               46799999999999888753  35778899999999999999999999999999999999999977 9999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      |+.+...    ....+...|..|.|||.+-+..  .|+.+.||||.||++.||+.|++-|.|.+..+.+..|.+--..|.
T Consensus       173 AK~L~~~----epniSYicSRyYRaPELifga~--~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt  246 (364)
T KOG0658|consen  173 AKVLVKG----EPNISYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT  246 (364)
T ss_pred             ceeeccC----CCceeEEEeccccCHHHHcCcc--ccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence            9998642    2224556789999999998653  699999999999999999999999999887766666654322221


Q ss_pred             ---------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ---------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ---------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                 +....++++.+|+.++|.++|.+|.++.+++.
T Consensus       247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  247 REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                                       22457899999999999999999999999987

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-38  Score=335.56  Aligned_cols=247  Identities=20%  Similarity=0.299  Sum_probs=213.8

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc---hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      |.=++.||.|+||.||-|++..+.+      .||||.+.-..   ..+++..+.+.  .++..+.|||++.+.|++..+.
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~e------vVAIKKMsySGKQs~EKWqDIlKEV--rFL~~l~HPntieYkgCyLre~   99 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDILKEV--RFLRQLRHPNTIEYKGCYLREH   99 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccc------eeeeeeccccccccHHHHHHHHHHH--HHHHhccCCCcccccceeeccc
Confidence            5556889999999999999877765      89999997543   34445555544  3788899999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|||||||-|+-.|++.- ...++.+.++..|+.+.+.||+|||+.+.||||||..|||+.++|.|||+|||.|.+.  
T Consensus       100 TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--  176 (948)
T KOG0577|consen  100 TAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--  176 (948)
T ss_pred             hHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc--
Confidence            9999999999988888764 4568999999999999999999999999999999999999999999999999998765  


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                           ....+++|||.|||||++.....|.|+-++||||||++..||.-.++|+..++....+..|.....+.-....++
T Consensus       177 -----~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS  251 (948)
T KOG0577|consen  177 -----APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWS  251 (948)
T ss_pred             -----CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhH
Confidence                 244568999999999999877778999999999999999999999999999998887777765543332345689


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.+|+..||++-|.+|||.+++++
T Consensus       252 ~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  252 DYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            99999999999999999999999887

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.6e-36  Score=324.66  Aligned_cols=247  Identities=17%  Similarity=0.275  Sum_probs=192.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+...+|++.+.||+|+||.||+|.+..++      ..||+|+.......      .  +..+++.++|+||+++++++.
T Consensus        62 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~valK~~~~~~~~------~--E~~~l~~l~h~~iv~~~~~~~  127 (357)
T PHA03209         62 VVASLGYTVIKTLTPGSEGRVFVATKPGQP------DPVVLKIGQKGTTL------I--EAMLLQNVNHPSVIRMKDTLV  127 (357)
T ss_pred             hhhhcCcEEEEEecCCCCeEEEEEEECCCC------ceEEEEeCCccccH------H--HHHHHHhCCCCCCcChhheEE
Confidence            355568999999999999999999986655      47999986443221      1  223566779999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .....|+|||++.|++.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus       128 ~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        128 SGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             eCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccc
Confidence            9999999999999999888764 456799999999999999999999999999999999999999999999999999875


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCCH----------HHHHHHH
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSV----------DEIYDAV  265 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf-~~~~~----------~ei~~~i  265 (620)
                      ...    ........||+.|+|||++.+.   .++.++|+|||||++|||+++..|+ .....          ..+.+.+
T Consensus       207 ~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~  279 (357)
T PHA03209        207 PVV----APAFLGLAGTVETNAPEVLARD---KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKII  279 (357)
T ss_pred             ccc----CcccccccccccccCCeecCCC---CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHH
Confidence            422    1223345799999999998643   6889999999999999999965544 32111          1111111


Q ss_pred             Hhcc-CCCCCC------------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          266 VRRQ-EIPPIP------------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       266 ~~~~-~~~~~p------------------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .... ....++                              ..++.++.+||.+||+.||++|||+.|+++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        280 STLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             HHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence            1100 000111                              245677888999999999999999999997

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.3e-36  Score=310.68  Aligned_cols=251  Identities=23%  Similarity=0.282  Sum_probs=198.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||.|+||.||+|++..++      +.||||.++......  ...+..+.  .+++.++|+||+++++++..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~~~~~~   72 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTG------EVVALKKIRLDTETEGVPSTAIREI--SLLKELNHPNIVKLLDVIHTEN   72 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCC------CEEEEEEccccccccccchHHHHHH--HHHHhcCCCCCcchhhhcccCC
Confidence            5899999999999999999976554      479999987543221  12222222  3566679999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||+.+++.+.+.......+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||+++....
T Consensus        73 ~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~  152 (284)
T cd07860          73 KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  152 (284)
T ss_pred             cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999998888887665567899999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------  272 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-------  272 (620)
                         .........+++.|+|||++.+.  ..++.++|+||||+++|+|+||+.||.+.+..+....+......+       
T Consensus       153 ---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07860         153 ---PVRTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG  227 (284)
T ss_pred             ---CccccccccccccccCCeEEecC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence               11222334678999999987642  246788999999999999999999998776544333332211110       


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          .....+++++.++|.+||+.||++||+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         228 VTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                                012357889999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=5.7e-36  Score=313.23  Aligned_cols=248  Identities=22%  Similarity=0.329  Sum_probs=195.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.++||+|+||.||+|.+..++      ..||+|.++.............+. .++..++|+||+++++++..++.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~   73 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSG------LIMARKLIHLEIKPAIRNQIIREL-KVLHECNSPYIVGFYGAFYSDGE   73 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCC------eEEEEEEeccccCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEeeCCE
Confidence            47999999999999999999976655      479999987653332222222222 24566799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +|+||||++| +|.+.+.  +...+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.++|+|||++....
T Consensus        74 ~~lv~ey~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          74 ISICMEHMDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             EEEEeeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            9999999985 6666654  34678999999999999999999998 589999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-----------  267 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~-----------  267 (620)
                      .     .......|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+..           
T Consensus       152 ~-----~~~~~~~~~~~~~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (308)
T cd06615         152 D-----SMANSFVGTRSYMSPERLQGT---HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH  223 (308)
T ss_pred             c-----cccccCCCCcCccChhHhcCC---CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCc
Confidence            2     223446789999999998643   578899999999999999999999976554333222211           


Q ss_pred             ------------------------ccCCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 ------------------------RQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ------------------------~~~~~~~p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              ....+..| ..++.++++++.+||..||++||++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                                    01111222 236889999999999999999999999997

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-38  Score=332.74  Aligned_cols=282  Identities=22%  Similarity=0.267  Sum_probs=240.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++++++..||-|+||.|=++..++...      .+|+|++++...-  ++++-...+..+++.+ +.+.||++|
T Consensus       414 ~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~------~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLY  486 (732)
T KOG0614|consen  414 FAQVKLSDLKRIATLGVGGFGRVELVKVNSQKA------TFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLY  486 (732)
T ss_pred             hcccchhhhhhhhhcccCccceEEEEEecccch------HHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHH
Confidence            344677889999999999999999998765432      5899999764421  1122122223344444 589999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      -.|.++.++|+.||-|-| .+-..+.  ..+.|++.++.+|+.-+++|++|||++|||+|||||+|++++.+|.+||.||
T Consensus       487 rTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDF  564 (732)
T KOG0614|consen  487 RTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDF  564 (732)
T ss_pred             HHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeeh
Confidence            999999999999999974 5555553  5688999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+.+..    .....++||||.|.|||++.++   ..+.++|.||||+++||||+|.+||.+.++...|+.|+++-..
T Consensus       565 GFAKki~~----g~KTwTFcGTpEYVAPEIILnK---GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~  637 (732)
T KOG0614|consen  565 GFAKKIGS----GRKTWTFCGTPEYVAPEIILNK---GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK  637 (732)
T ss_pred             hhHHHhcc----CCceeeecCCcccccchhhhcc---CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh
Confidence            99998853    4456789999999999999754   6788999999999999999999999999999999999999988


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCcccc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGYTEW  332 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~  332 (620)
                      ..+|..++....+||++++..+|.+|..     +.||.+ ..+.+.+|.....+.+++|..++...+
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~p  704 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANP  704 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCc
Confidence            9999999999999999999999999986     677776 566788999999999999999987776

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2e-36  Score=312.13  Aligned_cols=256  Identities=23%  Similarity=0.299  Sum_probs=198.5

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +.++|...+.||+|+||.||++.+..++      +.||+|.+..............+...+.+..+|+||+++++++..+
T Consensus         2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~   75 (288)
T cd06616           2 TAEDLKDLGEIGRGAFGTVNKMLHKPSG------TIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE   75 (288)
T ss_pred             cHHHhHHHHHhCCCCceEEEEEEECCCC------CEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence            4467788899999999999999987655      4899999976543332322333333455555699999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 GKICIIMKFYEGSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~---~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +..+++|||+.+++.++....   ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus        76 ~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  155 (288)
T cd06616          76 GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGIS  155 (288)
T ss_pred             CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchh
Confidence            999999999998776654322   346799999999999999999999985 9999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~~~~  273 (620)
                      +.+...    .......||+.|+|||++.+.....++.++|+|||||++|+|++|+.||..... .+....+... ..+.
T Consensus       156 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~  230 (288)
T cd06616         156 GQLVDS----IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DPPI  230 (288)
T ss_pred             HHhccC----CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-CCCc
Confidence            766431    122334689999999998643223588899999999999999999999976542 1222222211 1122


Q ss_pred             ----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                          .+..++.++.+||.+||..||++||++.+|++
T Consensus       231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                22358899999999999999999999999997

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.6e-36  Score=315.07  Aligned_cols=249  Identities=20%  Similarity=0.235  Sum_probs=185.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--CCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--NGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--~~~~~IV  124 (620)
                      .+||+|+||.||+|++....    .++.||+|.+......  .....+ . .+++.++||||+++++++..  +..+|++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~----~~~~~aiK~~~~~~~~--~~~~~E-~-~~l~~l~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGK----DDRDYALKQIEGTGIS--MSACRE-I-ALLRELKHPNVISLQKVFLSHADRKVWLL   78 (317)
T ss_pred             cccccCCCeEEEEEEEccCC----CCceEEEEEECCCCCc--HHHHHH-H-HHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence            58999999999999875322    2357999999754322  112222 2 35667799999999998864  4578999


Q ss_pred             EecCCCChHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE----ccCCcEEEeccCC
Q 007046          125 MKFYEGSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGI  193 (620)
Q Consensus       125 mE~~~GsLld~l~~~~-------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl----d~~~~vkL~DFGl  193 (620)
                      |||+++++.+.+....       ...+++..+..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            9999999888765321       2358999999999999999999999999999999999999    4567899999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHH
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------DEIYDA  264 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~---------~ei~~~  264 (620)
                      ++.+..............||+.|||||++.+.  ..++.++|+|||||++|+|++|++||.....         .+.+..
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~  236 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR  236 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHH
Confidence            98764332222334456899999999998642  2478899999999999999999999965332         111111


Q ss_pred             HHhccCCC------------------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQEIP------------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~~~~------------------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +......+                                    ......+.++.+||.+||+.||.+|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             HHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11100000                                    001123567889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=7.6e-36  Score=304.93  Aligned_cols=261  Identities=22%  Similarity=0.364  Sum_probs=207.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ++..++|.+.+.||+|+||.||+|.+.....   ....||||......... ...+..+.  .+++..+|+||+++++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~   76 (270)
T cd05056           2 EIQREDITLGRCIGEGQFGDVYQGVYMSPEN---EKIAVAVKTCKNCTSPSVREKFLQEA--YIMRQFDHPHIVKLIGVI   76 (270)
T ss_pred             eechhhceeeeeeCCccceeEEEEEEecCCC---CCcceEEEecCCcCCHHHHHHHHHHH--HHHHhCCCCchhceeEEE
Confidence            4567889999999999999999999765421   22469999987655322 23333322  255667899999999988


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .. +..|+||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+.+++|+||||+|||++.++.++|+|||++
T Consensus        77 ~~-~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~  154 (270)
T cd05056          77 TE-NPVWIVMELAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS  154 (270)
T ss_pred             cC-CCcEEEEEcCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCcee
Confidence            75 56789999998 567666653 3456899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +........  ......+++.|+|||.+...   .++.++|+||||+++||+++ |..||...+..+....+... ....
T Consensus       155 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~  228 (270)
T cd05056         155 RYLEDESYY--KASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-ERLP  228 (270)
T ss_pred             eecccccce--ecCCCCccccccChhhhccC---CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CcCC
Confidence            876432111  11123456789999998643   57889999999999999986 99999988877777666543 3445


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..++.++.+++.+||..+|++||++.++++.|...
T Consensus       229 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~  265 (270)
T cd05056         229 MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI  265 (270)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            6788999999999999999999999999999987763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.4e-36  Score=311.17  Aligned_cols=252  Identities=20%  Similarity=0.352  Sum_probs=199.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++++.||+|+||.||+|.+..++      +.||+|.++...... ...+..+.  .+++.++|+||+++++.+..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~e~--~~l~~~~~~~i~~~~~~~~~~~   72 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTG------VTMAMKEIRLELDESKFNQIIMEL--DILHKAVSPYIVDFYGAFFIEG   72 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCC------cEEEEEEeecccCHHHHHHHHHHH--HHHHhcCCCcHHhhhhheecCC
Confidence            47899999999999999999976554      479999987543322 23333332  2456679999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+|+||||++|..++.+....  ...+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||+++.
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  152 (286)
T cd06622          73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGN  152 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence            999999999965444443322  2478999999999999999999997 5999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEI  271 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~--~~~~  271 (620)
                      +..     .......|++.|+|||.+.+..   ...++.++|+|||||++|+|++|..||...........+..  ....
T Consensus       153 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd06622         153 LVA-----SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP  227 (286)
T ss_pred             ccC-----CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence            532     2233456889999999985431   22467899999999999999999999977655554443321  2234


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++..++.++.++|.+||..+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            5567779999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-36  Score=305.31  Aligned_cols=255  Identities=21%  Similarity=0.365  Sum_probs=199.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++....... ..+ ..+...+.+..+|+||+++++++....
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~-~~~-~~e~~~l~~~~~h~~i~~~~~~~~~~~   76 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTG------QLVAIKIMDIIEDEE-EEI-KEEYNILRKYSNHPNIATFYGAFIKKN   76 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCC------cEEEEEEEecCchhH-HHH-HHHHHHHHHhcCCCChheEEEEEEecC
Confidence            478999999999999999999976544      479999987654322 222 233334445558999999999997644


Q ss_pred             ------EEEEEEecCCC-ChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          120 ------KICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       120 ------~~~IVmE~~~G-sLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                            .+|+||||+++ ++.+.+....  +..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d  156 (275)
T cd06608          77 PPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVD  156 (275)
T ss_pred             CCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECC
Confidence                  48999999995 6666665433  57899999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      ||++......   ........|++.|+|||.+....  ...++.++|+||||+++|+|++|..||...........+...
T Consensus       157 ~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  233 (275)
T cd06608         157 FGVSAQLDST---LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN  233 (275)
T ss_pred             Cccceecccc---hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc
Confidence            9998765321   12223456899999999875321  235678999999999999999999999876655555444433


Q ss_pred             cCC-CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~-~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ... ...+..++.++.++|.+||..||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         234 PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            221 1223447889999999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-36  Score=307.27  Aligned_cols=248  Identities=23%  Similarity=0.345  Sum_probs=202.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||.|+||.||+|.+..++      ..||+|++..............+. .+++.++|+||+++++++..+..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~   73 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTN------QVVAIKVIDLEEAEDEIEDIQQEI-QFLSQCRSPYITKYYGSFLKGSK   73 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCC------eEEEEEEeeccccchHHHHHHHHH-HHHHHcCCCCeeeeeEEEEECCe
Confidence            47899999999999999999976554      489999997654222222222222 25566789999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|+|+||+++ ++.+.+.   ..++++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||+++....
T Consensus        74 ~~~v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609          74 LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             EEEEEEeeCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            9999999985 5665554   34889999999999999999999999999999999999999999999999999987743


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC-C
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG-L  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~-~  278 (620)
                      .   ........|++.|+|||.+.+.   .++.++|+||||+++|+|+||..||...+..+....+... ..+..+.. +
T Consensus       151 ~---~~~~~~~~~~~~y~~PE~~~~~---~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  223 (274)
T cd06609         151 T---MSKRNTFVGTPFWMAPEVIKQS---GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKF  223 (274)
T ss_pred             c---ccccccccCCccccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCccccc
Confidence            2   1223445789999999998644   4889999999999999999999999887776666555443 33444444 8


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.+++.+||..+|++||+++++++
T Consensus       224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         224 SKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.8e-36  Score=304.13  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=200.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-----HH---HHHHHHHHHHHHccCCCceeEeEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-----MR---VLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-----~~---~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      +|.+...||+|+||.||+|.+..++      +.||+|.+.......     ..   ....++. .+++.++|+||+++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~   73 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSG------ELMAVKQVELPSVSASSKDRKRSMLDALAREI-ALLKELQHENIVQYLG   73 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCC------cEEEEEEecCCCcccchhHHHHHHHHHHHHHH-HHHHhcCCCCeeeEEE
Confidence            4788899999999999999976544      479999887543221     11   1112222 3566779999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++...+..+++|||++| +|.+.+.  ..+.+++..+..++.|++.||+|||+.+++||||+|+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg  151 (267)
T cd06628          74 SSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFG  151 (267)
T ss_pred             EEEeCCccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccC
Confidence            99999999999999985 5555554  34678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCC---CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          193 IPHLLLGIPLP---SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       193 la~~~~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      +++........   ........|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+.. .
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~  227 (267)
T cd06628         152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT---SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-N  227 (267)
T ss_pred             CCcccccccccCCccccccccCCCcCccChhHhccC---CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-c
Confidence            99877532111   1112345689999999998643   578899999999999999999999987766555444433 3


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.++..++.++.++|++||+.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         228 ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            445677889999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=6.1e-36  Score=302.60  Aligned_cols=249  Identities=22%  Similarity=0.365  Sum_probs=205.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||++.+..++      +.||+|.+.....  .....+..+.  ..++.++|+||+++++++...+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDG------KQYVIKEINISKMSPKEREESRKEV--AVLSNMKHPNIVQYQESFEENG   72 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCC------CEEEEEEEEhHhCChHHHHHHHHHH--HHHHhCCCCCeeeeEeeecCCC
Confidence            5899999999999999999976544      4799999875322  2222222222  3567789999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++ +++.+.+.......+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~  152 (256)
T cd08218          73 NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLN  152 (256)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence            9999999998 577777654344578999999999999999999999999999999999999999999999999997663


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      ...   .......|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..+....+.... .+..+..+
T Consensus       153 ~~~---~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  225 (256)
T cd08218         153 STV---ELARTCIGTPYYLSPEICENR---PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-YPPVSSHY  225 (256)
T ss_pred             cch---hhhhhccCCccccCHHHhCCC---CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-CCCCcccC
Confidence            311   112234689999999998643   57789999999999999999999998888877777765443 44567789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.++|.+||+.+|++||++.++++
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         226 SYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5e-36  Score=306.13  Aligned_cols=253  Identities=19%  Similarity=0.252  Sum_probs=192.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ++||+|+||.||+|......    ....+|+|.+........ ..+.++.  ..++..+|+||+++++.+......|+||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~--~~~~~l~h~nii~~~~~~~~~~~~~lv~   74 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGM----SKARVVVKELRASATPDEQLLFLQEV--QPYRELNHPNVLQCLGQCIESIPYLLVL   74 (269)
T ss_pred             CcCCccCCceEEEEEEecCC----CCeEEEEeecCccCChHHHHHHHHHH--HHHHhCCCCCcceEEEEECCCCceEEEE
Confidence            36999999999999764331    235799998865443332 2333332  2456679999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          126 KFYE-GSVGDRMAQLKG---GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~---~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      ||++ |+|.+.+...+.   ...++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  154 (269)
T cd05042          75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED  154 (269)
T ss_pred             EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch
Confidence            9998 577776654322   234678889999999999999999999999999999999999999999999986543211


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCC----CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC----CC
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IP  272 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~----~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~----~~  272 (620)
                      .. .......+++.|+|||++...    ....++.++|+|||||++|||++ |..||......+.+..+.....    .+
T Consensus       155 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  233 (269)
T cd05042         155 YY-ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKP  233 (269)
T ss_pred             he-eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCC
Confidence            11 111334567889999987531    12356789999999999999999 8899988777666655544332    23


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ..+..+++.+.+++..|+ .||++||++++|++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         234 QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            345678899999999999 5999999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.1e-36  Score=331.95  Aligned_cols=246  Identities=23%  Similarity=0.328  Sum_probs=200.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccC------CCceeEeEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG------VEGICWLQGIS  115 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~------h~nIv~l~g~~  115 (620)
                      +|.+++.||+|+||.|-+|.++.|++      .||||++++...-..+... +.  .++.+++      --|+|+++++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e------~VAIKIiKN~k~f~~Q~~~-Ei--~iL~~ln~~d~~~~~n~Vrm~d~F  257 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGE------IVAIKIIKNKKRFLRQAQI-EI--RILELLNKHDPDDKYNIVRMLDYF  257 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCc------EEEEEeeccChHHHHHHHH-HH--HHHHHHhccCCCCCeeEEEeeecc
Confidence            68999999999999999999988886      7999999876543222221 11  1222222      23799999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC--CcEEEeccCC
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGI  193 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~--~~vkL~DFGl  193 (620)
                      ...+++|||+|++.-+|+++++..+-..|++..+..++.||+.||.+||..+|||+|||||||||.+.  ..+||+|||.
T Consensus       258 ~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  258 YFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGS  337 (586)
T ss_pred             ccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccc
Confidence            99999999999999999999998777889999999999999999999999999999999999999754  4799999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +....      ....+.+-+..|.|||++.|.   +|+.+.|+||||||+.||++|.+.|.|.+..+.+..|.+-...|+
T Consensus       338 Sc~~~------q~vytYiQSRfYRAPEVILGl---pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp  408 (586)
T KOG0667|consen  338 SCFES------QRVYTYIQSRFYRAPEVILGL---PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP  408 (586)
T ss_pred             ccccC------CcceeeeeccccccchhhccC---CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence            98753      233466788899999999754   899999999999999999999999999888776666554221111


Q ss_pred             --------------------------------------------------CC-------C----CCCHHHHHHHHHhhhc
Q 007046          274 --------------------------------------------------IP-------S----GLPPAVENVLLGCFEY  292 (620)
Q Consensus       274 --------------------------------------------------~p-------~----~~s~~l~~Li~~cL~~  292 (620)
                                                                        .|       .    .-...+.++|++||+.
T Consensus       409 ~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~  488 (586)
T KOG0667|consen  409 PKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW  488 (586)
T ss_pred             HHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc
Confidence                                                              01       0    1124578999999999


Q ss_pred             CcCCCCCHHHHHH
Q 007046          293 DLRSRPLMTDILR  305 (620)
Q Consensus       293 dP~~RPs~~eil~  305 (620)
                      ||.+|++..++++
T Consensus       489 dP~~R~tp~qal~  501 (586)
T KOG0667|consen  489 DPAERITPAQALN  501 (586)
T ss_pred             CchhcCCHHHHhc
Confidence            9999999999998

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.2e-36  Score=329.34  Aligned_cols=247  Identities=21%  Similarity=0.255  Sum_probs=194.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ...|.+.+.||+|+||.||+|.+..++      +.||||......      ...+ . .+++.++|+||+++++++..++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~------~~vavK~~~~~~------~~~E-~-~iL~~L~HpnIv~l~~~~~~~~  233 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYP------QRVVVKAGWYAS------SVHE-A-RLLRRLSHPAVLALLDVRVVGG  233 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCC------CEEEEecccccC------HHHH-H-HHHHHCCCCCCCcEEEEEEECC
Confidence            457999999999999999999986654      479999653221      1122 2 3566779999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+|||++.+++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+..
T Consensus       234 ~~~lv~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        234 LTCLVLPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EEEEEEEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence            9999999999998888764 345799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhccCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------SVDEIYDAVVRRQEI  271 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~--------~~~ei~~~i~~~~~~  271 (620)
                      ... ........||+.|||||++.+.   .++.++|||||||++|||++|..|+...        ...++.+.+......
T Consensus       313 ~~~-~~~~~~~~GT~~Y~APE~~~~~---~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~  388 (461)
T PHA03211        313 SWS-TPFHYGIAGTVDTNAPEVLAGD---PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH  388 (461)
T ss_pred             ccc-cccccccCCCcCCcCHHHHcCC---CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence            211 1122345799999999999654   6889999999999999999987664321        123344333322110


Q ss_pred             -CCCC-------------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 -PPIP-------------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 -~~~p-------------------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ..++                               ..++.++.+||.+||..||++||++.|+|+
T Consensus       389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence             0000                               134568999999999999999999999998

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.1e-35  Score=302.46  Aligned_cols=256  Identities=24%  Similarity=0.411  Sum_probs=207.0

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..++|++.++||+|+||.||+|.+...       ..+|+|.++.... ....+..+.  .+++..+|+||+++++++.
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~-------~~~~iK~~~~~~~-~~~~~~~e~--~~l~~l~~~~i~~~~~~~~   71 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSM-SVEAFLAEA--NVMKTLQHDKLVKLHAVVT   71 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCC-------ccEEEEecCCChh-HHHHHHHHH--HHHHhcCCCCcceEEEEEc
Confidence            46778999999999999999999975433       2599999875432 222333322  2566678999999999987


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      . ...|++|||++ |++.+++.......+++..++.++.||+.||.|||+.+++|+||||+||+++.++.++|+|||+++
T Consensus        72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~  150 (260)
T cd05073          72 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR  150 (260)
T ss_pred             C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCccee
Confidence            7 77899999998 688888765445678889999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+.....  .......++..|+|||++..   +.++.++|+||||+++|++++ |..||.+.+..+....+... .....
T Consensus       151 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~  224 (260)
T cd05073         151 VIEDNEY--TAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR  224 (260)
T ss_pred             eccCCCc--ccccCCcccccccCHhHhcc---CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCCCC
Confidence            6643211  11222346778999999864   357889999999999999999 99999988877777666543 33345


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +...+.++.+++.+||..+|++||++.++++.|..
T Consensus       225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         225 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            67889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1e-35  Score=301.03  Aligned_cols=253  Identities=22%  Similarity=0.373  Sum_probs=203.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +++++|++.+.||+|+||.||+|.+...       ..+|+|.+....... ..+..+.  ..++.++|+||+++++++..
T Consensus         1 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~-------~~~~~k~~~~~~~~~-~~~~~e~--~~l~~l~~~~i~~~~~~~~~   70 (256)
T cd05112           1 IHPSELTLVQEIGSGQFGLVWLGYWLEK-------RKVAIKTIREGAMSE-EDFIEEA--QVMMKLSHPKLVQLYGVCTE   70 (256)
T ss_pred             CChhHeEEEeeecCcccceEEEEEEeCC-------CeEEEEECCCCCCCH-HHHHHHH--HHHHhCCCCCeeeEEEEEcc
Confidence            4678999999999999999999986432       369999987544322 2233332  25566789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ....|+||||++| +|.+.+. ...+.+++..+..++.|++.+|+|||+.+++|+||||+||+++.++.++|+|||+++.
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~  149 (256)
T cd05112          71 RSPICLVFEFMEHGCLSDYLR-AQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRF  149 (256)
T ss_pred             CCceEEEEEcCCCCcHHHHHH-hCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceee
Confidence            9999999999995 4444443 3456789999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......  .......++..|+|||.+.+   +.++.++|+||||+++|||++ |..||......++.+.+.... ....+
T Consensus       150 ~~~~~~--~~~~~~~~~~~~~aPe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~  223 (256)
T cd05112         150 VLDDQY--TSSTGTKFPVKWSSPEVFSF---SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-RLYKP  223 (256)
T ss_pred             cccCcc--cccCCCccchhhcCHhHhcc---CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-CCCCC
Confidence            532211  11122345678999999864   358889999999999999998 999999888877777765432 33345


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ...+.++.+|+.+||+.+|++||++.++++.|
T Consensus       224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         224 RLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            66899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.1e-35  Score=300.18  Aligned_cols=248  Identities=20%  Similarity=0.342  Sum_probs=203.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|.+..++      +.+|+|.+......  ....+..+ . ..++..+|+||+++++.+..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e-~-~~l~~~~~~~i~~~~~~~~~~~   72 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQ------KLVIIKQIPVEQMTKDERLAAQNE-C-QVLKLLSHPNIIEYYENFLEDK   72 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCC------cEEEEEEEeccccccHHHHHHHHH-H-HHHhhCCCCchhheeeeEecCC
Confidence            5899999999999999999976554      48999998764322  22222222 2 3566779999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCcccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~~~  197 (620)
                      ..++||||++| +|.+.+.......+++..+..++.|++.+|+|||+++++|+||||+||+++.++ .++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (256)
T cd08220          73 ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL  152 (256)
T ss_pred             EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence            99999999985 677777654455689999999999999999999999999999999999998654 5799999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...    .......|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+.... ...++..
T Consensus       153 ~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  224 (256)
T cd08220         153 SSK----SKAYTVVGTPCYISPELCEGK---PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-FAPISDR  224 (256)
T ss_pred             CCC----ccccccccCCcccCchhccCC---CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-CCCCCCC
Confidence            431    122335689999999998643   57889999999999999999999999888777766665433 3456778


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++++.+++.+||..||++||++.+++.
T Consensus       225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         225 YSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=9.3e-36  Score=312.87  Aligned_cols=250  Identities=19%  Similarity=0.279  Sum_probs=205.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .|...+.||+|+||.||+|.+..++      ..||+|.+.......   ...+..+.  ..++..+|+|++++++++..+
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~   97 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTN------EVVAIKKMSYSGKQSNEKWQDIIKEV--KFLQRIKHPNSIEYKGCYLRE   97 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCC------cEEEEEEEecCCCCchHHHHHHHHHH--HHHHhCCCCCEEEEEEEEeeC
Confidence            4778899999999999999976554      479999987543222   22222222  255667899999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ...|+||||++|++.+.+.. ...++++..+..++.||+.||.|||+.+|+||||+|+||+++.++.++|+|||++....
T Consensus        98 ~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635          98 HTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CeEEEEEeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            99999999999988887754 45678999999999999999999999999999999999999999999999999986542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                             ......|++.|+|||++.....+.++.++|+|||||++|+|++|..||...+.......+.........+..+
T Consensus       177 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (317)
T cd06635         177 -------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW  249 (317)
T ss_pred             -------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccc
Confidence                   1234578999999999753223467889999999999999999999998887777666666554444445678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ++.+.+++.+||+.+|.+||++.++++..
T Consensus       250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         250 SDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             cHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            89999999999999999999999999843

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.3e-35  Score=299.26  Aligned_cols=247  Identities=23%  Similarity=0.326  Sum_probs=196.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||+|....       +..||+|.++.............+. .+++.++|+||+++++++...+..++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~~-------~~~~a~K~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   72 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKD-------KTPVAVKTCKEDLPQELKIKFLSEA-RILKQYDHPNIVKLIGVCTQRQPIYIVME   72 (250)
T ss_pred             CccCCCCCceEEEEEecC-------CcEEEEEecCCcCCHHHHHHHHHHH-HHHHhCCCCCcCeEEEEEecCCccEEEEE
Confidence            369999999999997532       2479999987665433332222232 24556799999999999999999999999


Q ss_pred             cCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++ |++.+.+.. ....+++..+..++.|++.+|.|||+++++|+||||+||+++.++.++|+|||++........  .
T Consensus        73 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~  149 (250)
T cd05085          73 LVPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY--S  149 (250)
T ss_pred             CCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc--c
Confidence            998 555555543 445789999999999999999999999999999999999999999999999999875432111  1


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......+++.|+|||++..   +.++.++|+||||+++|++++ |..||...........+... .....+..++.++.+
T Consensus       150 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  225 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNY---GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-YRMSCPQKCPDDVYK  225 (250)
T ss_pred             cCCCCCCcccccCHHHhcc---CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHH
Confidence            1112245678999999864   357889999999999999998 99999988877776666433 344567789999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          285 VLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ++.+||..+|++||++.++++.|.
T Consensus       226 li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         226 VMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhc
Confidence            999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=7.6e-36  Score=309.82  Aligned_cols=258  Identities=22%  Similarity=0.372  Sum_probs=204.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...++.++|++.+.||+|+||.||+|.+..++      +.||||.++...... ......+. ..+.+..+|+||+++++
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~i~~~~~   81 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTG------HVMAVKQMRRTGNKEENKRILMDL-DVVLKSHDCPYIVKCYG   81 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCC------eEEEEEEEeccCChHHHHHHHHHH-HHHHhccCCCchHhhhe
Confidence            34577899999999999999999999976544      589999997644322 22233332 24556667999999999


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++......|++|||+++.+.+++.. ....+++..+..++.||+.||+|||+ .+|+||||+|+||+++.++.++|+|||
T Consensus        82 ~~~~~~~~~~v~e~~~~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg  160 (296)
T cd06618          82 YFITDSDVFICMELMSTCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFG  160 (296)
T ss_pred             eeecCCeEEEEeeccCcCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccc
Confidence            9999999999999999887777765 34588999999999999999999997 599999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQE  270 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~  270 (620)
                      ++..+...    .......+++.|+|||++.+.. .+.++.++|+||||+++|+|++|+.||..... .+.+..+.... 
T Consensus       161 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-  235 (296)
T cd06618         161 ISGRLVDS----KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-  235 (296)
T ss_pred             cchhccCC----CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-
Confidence            98765321    1223346889999999987442 34578899999999999999999999976433 34444444332 


Q ss_pred             CCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+  ..++.++.+++.+||..||.+||++.++++
T Consensus       236 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         236 PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            22222  347899999999999999999999999987

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=6.7e-36  Score=308.95  Aligned_cols=253  Identities=19%  Similarity=0.254  Sum_probs=197.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.++......  ...+.. +..++..+.+|+||+++++++...
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~------~~v~lK~~~~~~~~~~~~~~~~~-E~~~l~~l~~~~~i~~~~~~~~~~   73 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTG------KLVALKKTRLEMDEEGIPPTALR-EISLLQMLSESIYIVRLLDVEHVE   73 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCC------cEEEEEeehhhccccCCchHHHH-HHHHHHHccCCCCccceeeeEeec
Confidence            47999999999999999999986655      479999986543221  122222 333445555789999999998876


Q ss_pred             CE-----EEEEEecCCCChHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEe
Q 007046          119 GK-----ICIIMKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLG  189 (620)
Q Consensus       119 ~~-----~~IVmE~~~GsLld~l~~~~---~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~  189 (620)
                      +.     .|+||||+++++.+.+....   ...+++..++.++.||+.||.|||+++|+||||||+||+++. ++.++|+
T Consensus        74 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~  153 (295)
T cd07837          74 EKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA  153 (295)
T ss_pred             CCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence            65     89999999999888876432   246899999999999999999999999999999999999998 8899999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++.+...   ........+++.|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.+..+.+..+....
T Consensus       154 dfg~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  228 (295)
T cd07837         154 DLGLGRAFSIP---VKSYTHEIVTLWYRAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL  228 (295)
T ss_pred             ecccceecCCC---ccccCCcccccCCCChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            99998765321   1122234678999999988532  247889999999999999999999998877655444433211


Q ss_pred             CCC--------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIP--------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~--------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+                          .....+++++.++|.+||.+||++||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            100                          011357899999999999999999999999986

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=7.7e-36  Score=310.41  Aligned_cols=260  Identities=13%  Similarity=0.100  Sum_probs=192.7

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHH--H------HHHHH-HHHHccCCCc
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--L------ERLND-LFLKCQGVEG  107 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~--~------~~~~~-~~l~~~~h~n  107 (620)
                      .+..++|++.++||+|+||.||+|.+..+..   ....+|+|+..........+.  .      ..... .......|+|
T Consensus         8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~---~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~   84 (294)
T PHA02882          8 DITGKEWKIDKLIGCGGFGCVYETQCASDHC---INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG   84 (294)
T ss_pred             ccCCCceEEeeEEecCCCceEEEEEEcCCcc---cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence            3566899999999999999999999766521   123577886543332111110  0      00100 1234568999


Q ss_pred             eeEeEEEEEECC----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC
Q 007046          108 ICWLQGISVING----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       108 Iv~l~g~~~~~~----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~  183 (620)
                      ++++++.+....    ..+++||++..++.+.+..  ....++..+..++.|++.||+|||+++|+||||||+|||++.+
T Consensus        85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~  162 (294)
T PHA02882         85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN  162 (294)
T ss_pred             CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            999998766543    4588999988877777654  2346788899999999999999999999999999999999999


Q ss_pred             CcEEEeccCCcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-
Q 007046          184 DRAVLGDVGIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-  258 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-  258 (620)
                      +.++|+|||+|+.+......    ........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+... 
T Consensus       163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~---~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~  239 (294)
T PHA02882        163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA---CVTRRGDLESLGYCMLKWAGIKLPWKGFGHN  239 (294)
T ss_pred             CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence            99999999999876422111    1122334799999999998754   688999999999999999999999987632 


Q ss_pred             HHH--------HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          259 DEI--------YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       259 ~ei--------~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ...        ...+....   .....+++++.+++..|+..+|++||++.+|++.|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        240 GNLIHAAKCDFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             hHHHHHhHHHHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            221        12221111   12356789999999999999999999999999865

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=7.4e-36  Score=307.24  Aligned_cols=257  Identities=19%  Similarity=0.318  Sum_probs=197.5

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE--
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV--  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~--  116 (620)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++....... ..+ ..+..++.++.+|+||+++++++.  
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~-~~~-~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNG------SKAAVKILDPIHDID-EEI-EAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCC------ceeEEEeeccccchH-HHH-HHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            4578999999999999999999976554      479999986533221 222 222233444448999999999874  


Q ss_pred             ---ECCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          117 ---INGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ---~~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                         .++.+|+||||++| +|.+.+...  ....+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~d  167 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVD  167 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEcc
Confidence               34579999999985 555554321  345789999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      ||+++.....   ........||+.|+|||++...  ....++.++|+|||||++|||++|+.||........+..+...
T Consensus       168 fg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~  244 (286)
T cd06638         168 FGVSAQLTST---RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN  244 (286)
T ss_pred             CCceeecccC---CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc
Confidence            9998866331   1122344799999999997532  1235788999999999999999999999877654444333222


Q ss_pred             cC-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          269 QE-IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       269 ~~-~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      .. ....+..++.++.++|.+||+.||++||++.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         245 PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            11 122345678899999999999999999999999873

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.5e-35  Score=302.35  Aligned_cols=255  Identities=25%  Similarity=0.340  Sum_probs=198.3

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++.++......||+|+||.||+|.+..++      ..||+|.+..........+..+.  .+++.++|+||+++++++..
T Consensus         5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~~k~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~   76 (268)
T cd06624           5 YEYDENGERVVLGKGTYGIVYAARDLSTQ------VRIAIKEIPERDSRYVQPLHEEI--ALHSYLKHRNIVQYLGSDSE   76 (268)
T ss_pred             cccccCCceEEEecCCceEEEEeEecCCC------cEEEEEEecCCCHHHHHHHHHHH--HHHHhcCCCCeeeeeeeecc
Confidence            34445555678999999999999875544      47999998766554444444433  25567799999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCC
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGI  193 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l--~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGl  193 (620)
                      ++..+++|||++| +|.+.+.. ....+  ++..+..++.||+.||+|||+++|+||||||+||+++. ++.++|+|||+
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~  155 (268)
T cd06624          77 NGFFKIFMEQVPGGSLSALLRS-KWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGT  155 (268)
T ss_pred             CCEEEEEEecCCCCCHHHHHHH-hcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchh
Confidence            9999999999985 55555543 33455  78889999999999999999999999999999999986 67999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~~  272 (620)
                      +.......   .......|++.|+|||++... ...++.++|+||||+++|+|++|..||...... .....+......+
T Consensus       156 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  231 (268)
T cd06624         156 SKRLAGIN---PCTETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP  231 (268)
T ss_pred             heecccCC---CccccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence            87653211   122334689999999998643 224778999999999999999999999754322 2222222223445


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++..+++++.+++.+||..+|.+||++.+++.
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            677889999999999999999999999999986

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.8e-35  Score=299.92  Aligned_cols=253  Identities=27%  Similarity=0.442  Sum_probs=200.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|.+..++      +.||+|.++.....  ....+..+.  ..++..+|+||+++++++...+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~~~~l~~~~i~~~~~~~~~~~   72 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTG------ELMAVKEIRIQDNDPKTIKEIADEM--KVLELLKHPNLVKYYGVEVHRE   72 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCC------cEEEEEEEECcccchHHHHHHHHHH--HHHHhCCCCChhheeeeEecCC
Confidence            5899999999999999999875544      48999999765543  223333332  2566679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+++|+||+++ +|.+.+.  ....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.+||+|||++....
T Consensus        73 ~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          73 KVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             EEEEEEecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            99999999985 5555554  34568999999999999999999999999999999999999999999999999988764


Q ss_pred             CCCCCCCC-CCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCCCCC
Q 007046          199 GIPLPSSD-LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       199 ~~~~~~~~-~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~~~p~  276 (620)
                      ........ .....+++.|+|||++.+.....++.++|+||||+++|++++|..||.... .......+. ....+.+|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~  229 (264)
T cd06626         151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIPD  229 (264)
T ss_pred             CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh-cCCCCCCCc
Confidence            43222211 234578999999999875432347889999999999999999999997653 333333332 233444555


Q ss_pred             CC--CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GL--PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~--s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..  ++.+.+++.+||..+|.+||++.+++.
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            44  899999999999999999999999885

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=4.9e-36  Score=312.10  Aligned_cols=248  Identities=20%  Similarity=0.309  Sum_probs=199.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      .+|++.++||+|+||.||+|.+..++      +.||+|.+..........+..+.  ..++..+|+||+++++++..++.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATG------QEVAIKQMNLQQQPKKELIINEI--LVMRENKNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCC------CEEEEEEEecCccchHHHHHHHH--HHHHhCCCCCEeeEEEEEecCCE
Confidence            78999999999999999999876554      48999999765444333333332  35667799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .|+||||++| ++.+.+   ....+++..+..++.|++.||.|||+.+++||||||+|||++.++.++|+|||++.....
T Consensus        91 ~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          91 LWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             EEEeecccCCCCHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            9999999985 555444   235689999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~-~~~~~~p~~~  278 (620)
                      .   ........|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+.......+... ......+..+
T Consensus       168 ~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T cd06656         168 E---QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERL  241 (297)
T ss_pred             C---ccCcCcccCCccccCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCcccc
Confidence            1   1122345789999999998643   5788999999999999999999999876654433222222 1222345678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+.+++.+||..+|++||++.++++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         242 SAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            899999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4e-36  Score=308.93  Aligned_cols=252  Identities=22%  Similarity=0.303  Sum_probs=198.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.++||+|+||.||+|.+..++      +.||+|.+....... .......+. .+++..+|+||+++++++..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~   73 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETG------QIVAIKKFLESEDDKMVKKIAMREI-RMLKQLRHENLVNLIEVFRRKK   73 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCC------CEEEEEeHhhccCcchhhHHHHHHH-HHHHhcCCcchhhHHHhcccCC
Confidence            47999999999999999999976554      479999986543222 122222222 3566679999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||+++++++.+.. ....+++..++.++.||+.||+|||+.+++|+||+|+||++++++.++|+|||++..+..
T Consensus        74 ~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          74 RLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             eEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            9999999999877776654 345689999999999999999999999999999999999999999999999999887643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC---------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------  270 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~---------  270 (620)
                      .   ........++..|+|||++.+.  ..++.++|+||||+++|||++|.+||......+....+.....         
T Consensus       153 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd07846         153 P---GEVYTDYVATRWYRAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI  227 (286)
T ss_pred             C---ccccCcccceeeccCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence            2   1223345689999999998632  3467899999999999999999999987665443333321100         


Q ss_pred             -----------CC---------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -----------IP---------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -----------~~---------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                 .+         .....++..+.+++.+||..+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                       00         012467899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.2e-35  Score=310.23  Aligned_cols=254  Identities=22%  Similarity=0.258  Sum_probs=202.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ...++|++.+.||+|+||.||+|.+..++      ..||+|.++......  ......+.  .+++.++|+||+++++++
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~~   75 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSG------EIVALKKVRMDNERDGIPISSLREI--TLLLNLRHPNIVELKEVV   75 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCC------cEEEEEEEEeccCCCCCcchhhHHH--HHHHhCCCCCCcceEEEE
Confidence            35688999999999999999999987655      479999987543221  11112222  355667899999999998


Q ss_pred             EEC--CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          116 VIN--GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       116 ~~~--~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      ...  +.+|+||||+.+++.+.+.. ....+++..+..++.||+.||+|||+.+++||||||+||+++.++.+||+|||+
T Consensus        76 ~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~  154 (309)
T cd07845          76 VGKHLDSIFLVMEYCEQDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGL  154 (309)
T ss_pred             ecCCCCeEEEEEecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccce
Confidence            754  56899999999988888765 346789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-  272 (620)
                      ++......   .......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|.+||...+..+.+..+......+ 
T Consensus       155 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~  229 (309)
T cd07845         155 ARTYGLPA---KPMTPKVVTLWYRAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN  229 (309)
T ss_pred             eeecCCcc---CCCCcccccccccChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            98764321   122333568899999998642  247889999999999999999999999888877766665422110 


Q ss_pred             ----------------CCC-----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ----------------PIP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ----------------~~p-----------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                      ..+           ...++++.++|.+||..||++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             hhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                            000           125888999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.4e-35  Score=309.30  Aligned_cols=253  Identities=19%  Similarity=0.251  Sum_probs=198.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||++.+..++      +.||+|.+........  ......+. .+++..+|+||+++++.+..+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~   73 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETR------QRFAMKKINKQNLILRNQIQQVFVER-DILTFAENPFVVSMFCSFETK   73 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCC------cEEEEEEeehhhhhhHHHHHHHHHHH-HHHHhCCCCCeeeeEEEEecC
Confidence            47999999999999999999986655      4799999875432211  11222222 356677999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +.+|+||||++| +|.+.+.  ..+.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++..
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~  151 (305)
T cd05609          74 RHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIG  151 (305)
T ss_pred             CEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCcccc
Confidence            999999999996 5555554  3467899999999999999999999999999999999999999999999999998742


Q ss_pred             cCCCC------------CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          198 LGIPL------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       198 ~~~~~------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      .....            .........|+..|+|||.+.+   ..++.++|+||||+++|||++|..||.+.+..+++..+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~  228 (305)
T cd05609         152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR---QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV  228 (305)
T ss_pred             CcCccccccccccccchhhccccCCccCccccCchhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            11000            0001123468899999999864   36888999999999999999999999998888877776


Q ss_pred             HhccC-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          266 VRRQE-IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       266 ~~~~~-~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..... .+..+..++.++.++|.+||+.||++||+..++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  269 (305)
T cd05609         229 ISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFE  269 (305)
T ss_pred             HhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence            55432 23333468999999999999999999998544444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.4e-35  Score=300.70  Aligned_cols=255  Identities=21%  Similarity=0.284  Sum_probs=203.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||.|+||.||+|.+..++      ..+|+|++.............++. ..++.++|+||+++++.+...+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~   73 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNN------EKVAIKRIDLEKCQTSVDELRKEV-QAMSQCNHPNVVKYYTSFVVGDE   73 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCC------cEEEEEEeccCCcchHHHHHHHHH-HHHHhcCCCCEEEEEEEEeeCCE
Confidence            47999999999999999999876544      479999997544333222233332 24566799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .|++||+++| ++.+.+..... ..+++..+..++.||+.||+|||+.+++|+||||+||++++++.++|+|||++..+.
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA  153 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhc
Confidence            9999999985 66666654322 578999999999999999999999999999999999999999999999999998775


Q ss_pred             CCCCCC-CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--
Q 007046          199 GIPLPS-SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--  275 (620)
Q Consensus       199 ~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--  275 (620)
                      ...... .......|++.|+|||++...  ..++.++|+||||+++|+|++|+.||...+..+.+..+.... .+.++  
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~  230 (267)
T cd06610         154 DGGDRTRKVRKTFVGTPCWMAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETG  230 (267)
T ss_pred             cCccccccccccccCChhhcChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCc
Confidence            432221 122345789999999998643  257889999999999999999999998877766666554432 22222  


Q ss_pred             ---CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 ---SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ---~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                         ..+++++.+++.+||..||++||++.++++
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence               367899999999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=9.1e-36  Score=307.34  Aligned_cols=251  Identities=22%  Similarity=0.337  Sum_probs=191.6

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHH--HHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLN--DLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~--~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      .||+|+||.||++.+..++      +.||+|++.+....  .......++.  ..+....+|+||+.+++++..++..|+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l   74 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCF   74 (279)
T ss_pred             CcccCCCeEEEEEEECCCC------cEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEE
Confidence            4899999999999976544      48999999764322  1111111111  113344579999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  ..+.+++..+..++.|++.||+|||+.+|+||||||+|||++.++.++|+|||++.....   
T Consensus        75 v~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~---  149 (279)
T cd05633          75 ILDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---  149 (279)
T ss_pred             EEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccc---
Confidence            9999995 5544443  346799999999999999999999999999999999999999999999999999875532   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCCCCCCCCCCH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~--ei~~~i~~~~~~~~~p~~~s~  280 (620)
                        .......||+.|+|||.+..  ...++.++|+|||||++|+|++|..||......  ....... ......++..++.
T Consensus       150 --~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  224 (279)
T cd05633         150 --KKPHASVGTHGYMAPEVLQK--GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSP  224 (279)
T ss_pred             --cCccCcCCCcCccCHHHhcC--CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-hcCCcCCccccCH
Confidence              12233479999999999752  224788999999999999999999999754321  1222221 2234456778999


Q ss_pred             HHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCC
Q 007046          281 AVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWT  314 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~  314 (620)
                      ++.++|.+||..||++||     +++++++ .+.+..+|.
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~  264 (279)
T cd05633         225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQ  264 (279)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHh
Confidence            999999999999999999     5999988 344444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.9e-35  Score=343.55  Aligned_cols=254  Identities=20%  Similarity=0.274  Sum_probs=197.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|+++++||+|+||.||+|.+..++      ..||+|++......  ....+..+.  .++..++||||++++++
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg------~~vAlKvIk~~~l~e~~~~~~~~EI--~IL~~L~HPNIVrl~d~   80 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQ------EFFCWKAISYRGLKEREKSQLVIEV--NVMRELKHKNIVRYIDR   80 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCC------eEEEEEEEeccccCHHHHHHHHHHH--HHHHHcCCCCcCeEEEE
Confidence            345578999999999999999999987655      48999998754322  222232322  35677899999999998


Q ss_pred             EEE--CCEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeecccCCcEEEcc
Q 007046          115 SVI--NGKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-------GILVLNLKPFNFILNE  182 (620)
Q Consensus       115 ~~~--~~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~-------gIiHrDLKP~NILld~  182 (620)
                      |..  ...+||||||++ |+|.+.+...  ....+++..++.|+.||+.||.|||+.       +|+||||||+||||+.
T Consensus        81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            865  457999999998 5777777542  236799999999999999999999984       4999999999999964


Q ss_pred             -----------------CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHH
Q 007046          183 -----------------ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE  245 (620)
Q Consensus       183 -----------------~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~e  245 (620)
                                       .+.+||+|||+++.+...    .......||+.|||||++.+. ...++.++|||||||+||+
T Consensus       161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~----s~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG~ILYE  235 (1021)
T PTZ00266        161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE----SMAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALGCIIYE  235 (1021)
T ss_pred             CccccccccccccccCCCCceEEccCCcccccccc----ccccccCCCccccCHHHHhcc-CCCCCchhHHHHHHHHHHH
Confidence                             235899999999865321    122345799999999998643 2357889999999999999


Q ss_pred             HHhCCCCCCCCCHH-HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          246 MLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       246 lltG~~Pf~~~~~~-ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |+||..||...+.. .++..+...  ........+.++.+||..||..+|.+||++.+++.
T Consensus       236 LLTGk~PF~~~~~~~qli~~lk~~--p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        236 LCSGKTPFHKANNFSQLISELKRG--PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHCCCCCCcCCcHHHHHHHHhcC--CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            99999999765543 333333222  11122467899999999999999999999999986

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.2e-35  Score=303.53  Aligned_cols=255  Identities=19%  Similarity=0.233  Sum_probs=191.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|+||.||+|.+....    ....+|+|.++............++. .+++.++|+||+++++++......|+|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGY----TPAQVVVKELRVSASVQEQMKFLEEA-QPYRSLQHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCC----CceEEEEEecCCCCChHHHHHHHHHH-HHHHhCCCCCEeeEEEEEcCCCCcEEEEE
Confidence            36999999999999865322    23579999987654332222222222 35667799999999999998889999999


Q ss_pred             cCC-CChHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          127 FYE-GSVGDRMAQLKG---GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       127 ~~~-GsLld~l~~~~~---~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      |++ |+|.+.+...+.   ..+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||+++.......
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence            999 566666653221   3456778889999999999999999999999999999999999999999999875432111


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCC----CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC----CCC
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVR----GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IPP  273 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~----~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~----~~~  273 (620)
                       ........|++.|+|||++.+...    ..++.++|+||||+++|||++ |..||......+..........    .+.
T Consensus       156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
T cd05087         156 -YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR  234 (269)
T ss_pred             -eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence             111233467889999999863211    135789999999999999997 9999987776665444332221    122


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +....++.+.+++.+|+ .+|++||++++|+..|.
T Consensus       235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            33467889999999999 68999999999998653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.1e-35  Score=299.75  Aligned_cols=256  Identities=25%  Similarity=0.415  Sum_probs=204.6

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      +++.+.||+|+||.||+|.+...+.  .....||+|+++.............+. ..+..++|+||+++++++...+..|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~   77 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDADEQQIEEFLREA-RIMRKLDHPNIVKLLGVCTEEEPLM   77 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCChHHHHHHHHHH-HHHHhcCCCchheEEEEEcCCCeeE
Confidence            3577899999999999999876541  234689999997665442222222222 2445559999999999999999999


Q ss_pred             EEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       123 IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      ++|||++| ++.+.+.......+++..+..++.||+.||+|||+.+++|+||||+||+++.++.++|+|||+++......
T Consensus        78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            99999985 66666654333338999999999999999999999999999999999999999999999999998764332


Q ss_pred             CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCH
Q 007046          202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       202 ~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      .....  ...+++.|+|||.+.+   ..++.++|+||||+++|+|++ |..||...+..++.+.+.... ....+..++.
T Consensus       158 ~~~~~--~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (258)
T smart00219      158 YYKKK--GGKLPIRWMAPESLKD---GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-RLPKPENCPP  231 (258)
T ss_pred             ccccc--cCCCcccccChHHhcc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCCCCCcCCH
Confidence            11111  2237889999999853   357889999999999999998 899999888888887776544 4455777999


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      ++.+++.+||..||++||++.++++.|
T Consensus       232 ~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      232 EIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            999999999999999999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=6.1e-36  Score=304.81  Aligned_cols=255  Identities=23%  Similarity=0.349  Sum_probs=201.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      +.||+|+||.||+|++.....+...+..||||.+...... ....+..+.  ..++.++|+||+++++++...+..|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEA--HLMSNFNHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHH--HHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence            3699999999999998654433344568999998654422 223333322  2567779999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-----cEEEeccCCc
Q 007046          126 KFYE-GSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-----RAVLGDVGIP  194 (620)
Q Consensus       126 E~~~-GsLld~l~~~~-----~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-----~vkL~DFGla  194 (620)
                      ||++ |+|.+.+....     ...+++..++.++.||+.||.|||+.+++|+||||+||+++.++     .++|+|||++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            9998 57777765432     23478899999999999999999999999999999999999887     8999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +....... ........++..|+|||.+.+   +.++.++|+||||+++|+|++ |..||...+..+....+... ....
T Consensus       159 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~  233 (269)
T cd05044         159 RDIYKSDY-YRKEGEGLLPVRWMAPESLLD---GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GRLQ  233 (269)
T ss_pred             cccccccc-cccCcccCCCccccCHHHHcc---CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-CccC
Confidence            76532211 111223356789999999864   368889999999999999998 99999888777776665433 3445


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .+..+|.++.++|.+||..+|.+||++.++++.|+
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         234 KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            66788999999999999999999999999999775

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=306.62  Aligned_cols=252  Identities=23%  Similarity=0.350  Sum_probs=195.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||.+........ ..+..+ . .+++.++|+||+++++++..+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~E-~-~~l~~l~h~~i~~~~~~~~~~   75 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTG------QLVALKEIRLEHEEGAPFTAIRE-A-SLLKDLKHANIVTLHDIIHTK   75 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCC------cEEEEEEEecccccCCchhHHHH-H-HHHhhCCCcceeeEEEEEecC
Confidence            478999999999999999999976554      4799999875433221 122222 2 356667999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||++++|.+.+.. ....+++..+..++.||+.||.|||+++|+||||||+||+++.++.++|+|||+++...
T Consensus        76 ~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  154 (291)
T cd07844          76 KTLTLVFEYLDTDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS  154 (291)
T ss_pred             CeEEEEEecCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence            99999999999988887764 34578999999999999999999999999999999999999999999999999987542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIP-----  272 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~-----  272 (620)
                      .   .........+++.|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.. ..+....+......+     
T Consensus       155 ~---~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (291)
T cd07844         155 V---PSKTYSNEVVTLWYRPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETW  229 (291)
T ss_pred             C---CCccccccccccccCCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhh
Confidence            1   11122234578899999987632  347889999999999999999999997655 223222221110000     


Q ss_pred             -----------------------CCCCCCC--HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 -----------------------PIPSGLP--PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 -----------------------~~p~~~s--~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                             .....++  .++.+++.+||+.+|++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                                   0001234  88899999999999999999999886

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.4e-35  Score=304.48  Aligned_cols=251  Identities=22%  Similarity=0.295  Sum_probs=199.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|.+..++      ..||+|++..... .. ...+..+.  .+++..+|+||+++++++..+.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~~e~--~~l~~~~~~~i~~~~~~~~~~~   72 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETG------ETVALKKVALRRLEGGIPNQALREI--KALQACQHPYVVKLLDVFPHGS   72 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCC------ceEEEEEEEcccccchhhHHHHHHH--HHHHhCCCCCCcceeeEEecCC
Confidence            5899999999999999999976554      4799999976542 21 22222222  2456668999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||+.++|.+.+.. ....+++..++.++.||+.||+|||+.+++|+||||+||+++.++.++|+|||++.....
T Consensus        73 ~~~~v~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~  151 (286)
T cd07832          73 GFVLVMEYMPSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSE  151 (286)
T ss_pred             eeEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence            9999999997777777654 346799999999999999999999999999999999999999999999999999887643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------  272 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-------  272 (620)
                      ..  ........|+..|+|||++.+.  ..++.++|+||||+++|+|++|.+||.+....+.+..+......+       
T Consensus       152 ~~--~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd07832         152 EE--PRLYSHQVATRWYRAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG  227 (286)
T ss_pred             CC--CCccccccCcccccCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence            21  1123345799999999998532  346889999999999999999998898777655554443321111       


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           ......+.++.++|.+||..||++||+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                                 011356789999999999999999999999987

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1e-35  Score=315.04  Aligned_cols=252  Identities=21%  Similarity=0.258  Sum_probs=195.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||++........ ..+..+ . .+++.++|+||+++++++... 
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E-~-~~l~~l~h~niv~~~~~~~~~~   76 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTG------VKVAIKKISPFEHQTFCQRTLRE-I-KILRRFKHENIIGILDIIRPPS   76 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCC------CeEEEEEecccccchhHHHHHHH-H-HHHHhCCCCCcCchhheeeccc
Confidence            68999999999999999999987665      4799999965332222 222222 2 356667899999999987654 


Q ss_pred             ----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 ----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                          ...|++|||+++++.+.+   ....+++..+..++.||+.||+|||+.+|+||||||+|||++.++.++|+|||++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~  153 (336)
T cd07849          77 FESFNDVYIVQELMETDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLA  153 (336)
T ss_pred             ccccceEEEEehhcccCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccce
Confidence                358999999999887766   3467999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC----
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE----  270 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~----  270 (620)
                      +................||+.|||||.+.+  ...++.++|+||||+++|+|++|+.||.+.+.......+.....    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~  231 (336)
T cd07849         154 RIADPEHDHTGFLTEYVATRWYRAPEIMLN--SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ  231 (336)
T ss_pred             eeccccccccCCcCCcCcCCCccChHHhhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            876432222222344578999999998753  23578899999999999999999999987654333222211000    


Q ss_pred             --------------------CCC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 --------------------IPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 --------------------~~~-----~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          .+.     .....++++.++|.+||+.||++||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~  291 (336)
T cd07849         232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA  291 (336)
T ss_pred             HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                                000     11346788999999999999999999999998

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.5e-35  Score=306.76  Aligned_cols=252  Identities=20%  Similarity=0.266  Sum_probs=198.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||+|.+..++      +.||+|.+.......  ...+..+.  ..++.++|+||+++++++..+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~   73 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTN------ETIALKKIRLEQEDEGVPSTAIREI--SLLKEMQHGNIVRLQDVVHSE   73 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCC------cEEEEEehhhccccccchHHHHHHH--HHHHhccCCCEeeEEEEEecC
Confidence            57999999999999999999976554      479999986543221  12222222  355667999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~~~  197 (620)
                      ...|+||||+++++.+.+.......+++..+..++.||+.||+|||+++++|+||+|+||+++. ++.+||+|||+++..
T Consensus        74 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         74 KRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             CeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            9999999999998888876544445688899999999999999999999999999999999985 567999999999765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----  272 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-----  272 (620)
                      ...   ........+++.|+|||.+.+.  ..++.++|+||||+++|+|+||..||...+..+....+......+     
T Consensus       154 ~~~---~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  228 (294)
T PLN00009        154 GIP---VRTFTHEVVTLWYRAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW  228 (294)
T ss_pred             CCC---ccccccCceeecccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            221   1222344678999999988532  357889999999999999999999998876655544433211100     


Q ss_pred             --------------C--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------------P--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------------~--------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                    .        ....+++++.+++.+||+.+|++||++.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence                          0        12357889999999999999999999999987

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.5e-35  Score=316.15  Aligned_cols=249  Identities=19%  Similarity=0.225  Sum_probs=196.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .-.++|++.+.||+|+||.||+|.+..++      +.||||.+.....  ........+.  .+++..+|+||+++++++
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~   84 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTG------QNVAIKKLSRPFQNVTHAKRAYREL--VLMKLVNHKNIIGLLNVF   84 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCC------CEEEEEecCccccChhHHHHHHHHH--HHHHhcCCCCCcceeeee
Confidence            34578999999999999999999976655      4799999865322  2222222222  356677999999999988


Q ss_pred             EEC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          116 VIN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       116 ~~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      ...      ...|+||||+.+++.+.+..    .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus        85 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~  160 (353)
T cd07850          85 TPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL  160 (353)
T ss_pred             ccCCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEc
Confidence            643      35799999999988887753    28999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++.....    .......||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||...+....+..+....
T Consensus       161 Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  233 (353)
T cd07850         161 DFGLARTAGTS----FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQL  233 (353)
T ss_pred             cCccceeCCCC----CCCCCCcccccccCHHHHhCC---CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence            99999865321    122345789999999998643   68889999999999999999999998776554444332211


Q ss_pred             CCCC-----------------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPP-----------------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~-----------------------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.                                         .+...++++.++|.+||+.||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1100                                         01234667899999999999999999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=6.7e-36  Score=309.24  Aligned_cols=252  Identities=23%  Similarity=0.226  Sum_probs=199.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|.++........  ....+ . ..++..+|+||+++++++..
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e-~-~~l~~l~h~ni~~~~~~~~~   75 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTG------EIVALKKLKMEKEKEGFPITSLRE-I-NILLKLQHPNIVTVKEVVVG   75 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCC------cEEEEEEEeeccccccchhhHHHH-H-HHHHhcCCCCEEEEEEEEEe
Confidence            357999999999999999999976554      47999999754432111  11222 2 24555679999999999887


Q ss_pred             C--CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          118 N--GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       118 ~--~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .  +..||||||++++|.+.+.. ....+++..++.++.||+.||+|||+.+++|+||||+||+++.++.++|+|||+++
T Consensus        76 ~~~~~~~lv~e~~~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          76 SNLDKIYMVMEYVEHDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             cCCCcEEEEehhcCcCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence            7  88999999999988888764 33468999999999999999999999999999999999999999999999999988


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-----
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-----  270 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-----  270 (620)
                      ......   .......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||...+..+.+..+.....     
T Consensus       155 ~~~~~~---~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~  229 (293)
T cd07843         155 EYGSPL---KPYTQLVVTLWYRAPELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK  229 (293)
T ss_pred             eccCCc---cccccccccccccCchhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Confidence            764321   222344678999999998643  2467899999999999999999999988776665554432111     


Q ss_pred             ------------------------CCCCCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 ------------------------IPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ------------------------~~~~p~~-~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              ...++.. +++.+.++|++||+.||++||++.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                                    0112222 5888999999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.7e-35  Score=301.20  Aligned_cols=251  Identities=23%  Similarity=0.332  Sum_probs=198.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-----HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-----RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-----~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|++.+.||+|+||.||+|... +      ++.+|+|.++.....     .......++. ..++..+|+||+++++++.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~------~~~~avk~~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~   72 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-Q------GQLIAVKQVELDTSNVLAAEKEYEKLQEEV-DLLKSLKHVNIVQYLGTCL   72 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-C------CCeEEEEEeecCccchhhHHHHHHHHHHHH-HHHHhcCCCCEeeEeeEee
Confidence            5888999999999999999752 2      347999998754321     1111122222 2556678999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..|++|||++| +|.+.+.  +..++++..+..++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||+++
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631          73 DDNTISIFMEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             cCCeEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence            99999999999985 5555554  34678999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCC---CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCC
Q 007046          196 LLLGIPL---PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEI  271 (620)
Q Consensus       196 ~~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~-~~~  271 (620)
                      .......   .........||+.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+... ...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  227 (265)
T cd06631         151 RLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES---GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM  227 (265)
T ss_pred             hhhhccccccccccccccCCCccccChhhhcCC---CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC
Confidence            6532111   11122345689999999998643   5788999999999999999999999876655444333333 334


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+..++.++.++|++||..+|.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         228 PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            5677889999999999999999999999999986

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.7e-35  Score=305.01  Aligned_cols=252  Identities=21%  Similarity=0.308  Sum_probs=193.9

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHH-HHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERL-NDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~-~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      .||+|+||.||+|.+..++      +.||+|++.......   ......+. ........+|++|+.+++++...+..|+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~   74 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF   74 (278)
T ss_pred             CcccCCCeEEEEEEEecCC------CEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEE
Confidence            4899999999999875544      489999987643221   11111111 1123444689999999999999999999


Q ss_pred             EEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||++| +|.+.+.  +.+.+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||+++.+..   
T Consensus        75 v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~---  149 (278)
T cd05606          75 ILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---  149 (278)
T ss_pred             EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc---
Confidence            9999996 4444443  456799999999999999999999999999999999999999999999999999876532   


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhccCCCCCCCCCC
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                        .......||..|+|||.+.+.  ..++.++|+||||+++|+|++|..||....   ..+....+  ....+.++..++
T Consensus       150 --~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s  223 (278)
T cd05606         150 --KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFS  223 (278)
T ss_pred             --cCCcCcCCCcCCcCcHHhcCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hccCCCCCCcCC
Confidence              122345799999999998632  247889999999999999999999998663   23332222  223455677789


Q ss_pred             HHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCC
Q 007046          280 PAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~  316 (620)
                      .++.+++.+||..+|.+||     ++.++++ .+....+|...
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~  266 (278)
T cd05606         224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMV  266 (278)
T ss_pred             HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHh
Confidence            9999999999999999999     9999987 44444444433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1e-35  Score=301.21  Aligned_cols=249  Identities=21%  Similarity=0.343  Sum_probs=201.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.+.||+|+||.||++..        .++.||+|.++.....  ..+..+.  ..+..++|+||+++++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~--------~~~~~~iK~~~~~~~~--~~~~~e~--~~l~~~~~~~i~~~~~~~~~   70 (254)
T cd05083           3 LNLQKLTLGEIIGEGEFGAVLQGEY--------TGQKVAVKNIKCDVTA--QAFLEET--AVMTKLHHKNLVRLLGVILH   70 (254)
T ss_pred             ccHHHceeeeeeccCCCCceEeccc--------CCCceEEEeecCcchH--HHHHHHH--HHHHhCCCCCcCeEEEEEcC
Confidence            4567899999999999999999863        2246999998654322  2233322  25567799999999999875


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      + ..|++|||++ |+|.+.+.......+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++.
T Consensus        71 ~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083          71 N-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             C-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCcccee
Confidence            4 5799999998 5777777653445689999999999999999999999999999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ...      .......+..|+|||++.+   +.++.++|+||||+++|+|++ |..||...+..+....+... ..+..+
T Consensus       150 ~~~------~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~  219 (254)
T cd05083         150 GSM------GVDNSKLPVKWTAPEALKH---KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YRMEPP  219 (254)
T ss_pred             ccc------cCCCCCCCceecCHHHhcc---CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CCCCCC
Confidence            422      1122344678999999863   368889999999999999998 99999988887777766544 344456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..++.++.+++.+||+.+|++||++.+++..|+.
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            7889999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.1e-35  Score=305.49  Aligned_cols=248  Identities=22%  Similarity=0.329  Sum_probs=201.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ..|+..++||.|+||.||+|.+..++      ..||+|++..............+. .+++.++|+||+++++++..+..
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~   76 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQ------QVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYVTKYYGSYLKGTK   76 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCC------EEEEEEEEeccccHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEEECCE
Confidence            35778899999999999999976655      479999987543322222222222 24566799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .|+||||++| +|.+.+.   .+++++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          77 LWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             EEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            9999999985 5655553   46789999999999999999999999999999999999999999999999999977643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                      ..   .......++..|+|||++.+.   .++.++|+||||+++|||++|..||...+.......+. ....+.++..++
T Consensus       154 ~~---~~~~~~~~~~~y~apE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (277)
T cd06640         154 TQ---IKRNTFVGTPFWMAPEVIQQS---AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFS  226 (277)
T ss_pred             Cc---cccccccCcccccCHhHhccC---CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhh
Confidence            21   122334688999999998643   57889999999999999999999998877766655443 333455667789


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.+++.+||+.+|++||++.++++
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         227 KPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHh
Confidence            99999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.4e-35  Score=299.23  Aligned_cols=248  Identities=21%  Similarity=0.369  Sum_probs=201.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-----hHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-----DRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-----~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      +|+..+.||+|+||.||+|.+..++      ..||+|.+.....     .....+..+.  .+++..+|+||+++++++.
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~~   72 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDG------DFFAVKEVSLADDGQTGQEAVKQLEQEI--ALLSKLQHPNIVQYLGTER   72 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCC------cEEEEEEEEEccccccchHHHHHHHHHH--HHHHhcCCCCchheeeeEe
Confidence            4788899999999999999976544      4799999865432     1222222222  2556679999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .+..+|++|||++| ++.+.+.  +...+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.+||+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~  150 (258)
T cd06632          73 EEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAK  150 (258)
T ss_pred             cCCeEEEEEEecCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccce
Confidence            99999999999985 5555554  34568999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ......    ......|++.|++||.+....  .++.++|+||||+++|+|++|..||......+....+......+.++
T Consensus       151 ~~~~~~----~~~~~~~~~~y~~pe~~~~~~--~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T cd06632         151 QVVEFS----FAKSFKGSPYWMAPEVIAQQG--GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIP  224 (258)
T ss_pred             eccccc----cccccCCCcceeCHHHhcCCC--CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcC
Confidence            653321    234457899999999986431  37889999999999999999999998776655555555444566677


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+++++.+++++||..+|.+||++.+++.
T Consensus       225 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         225 DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            889999999999999999999999999986

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5e-36  Score=309.11  Aligned_cols=252  Identities=24%  Similarity=0.395  Sum_probs=198.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++.++|++.+.||+|+||.||+|.+..++      +.||+|++..............+. .+++.++|+||+++++++..
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~   74 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHIPTG------TVMAKKVVHIGAKSSVRKQILREL-QIMHECRSPYIVSFYGAFLN   74 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEcCCC------cEEEEEEEEecCcchHHHHHHHHH-HHHHHcCCCCcceEeeeEec
Confidence            45678999999999999999999976554      479999987554333222222222 24556789999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .+.+|+||||+++++++.+.. +.+.+++..+..++.|++.+|.|||+ .+++||||||+||+++.++.++|+|||++..
T Consensus        75 ~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~  153 (284)
T cd06620          75 ENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGE  153 (284)
T ss_pred             CCEEEEEEecCCCCCHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccc
Confidence            999999999999644444332 34678999999999999999999997 5899999999999999999999999999875


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHH
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-----------EIYDAV  265 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-----------ei~~~i  265 (620)
                      ...     .......||..|+|||++.+   +.++.++|+|||||++|+|++|..||......           +....+
T Consensus       154 ~~~-----~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd06620         154 LIN-----SIADTFVGTSTYMSPERIQG---GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI  225 (284)
T ss_pred             hhh-----hccCccccCcccCCHHHHcc---CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH
Confidence            422     12234579999999999863   36888999999999999999999999865432           233333


Q ss_pred             HhccCCCCCCC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          266 VRRQEIPPIPS-GLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       266 ~~~~~~~~~p~-~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      ... ..+.++. .++.++.+|+.+||.+||++||++.++++.
T Consensus       226 ~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         226 VQE-PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             hhc-cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            322 2233333 388899999999999999999999999973

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.1e-35  Score=300.14  Aligned_cols=249  Identities=23%  Similarity=0.348  Sum_probs=199.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|.+.....  ...+.++.  .+++.++|+||+++++++....
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~--~~~~~~e~--~~~~~l~~~~i~~~~~~~~~~~   71 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETG------QVVAIKVVPVEED--LQEIIKEI--SILKQCDSPYIVKYYGSYFKNT   71 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCC------cEEEEEEeecHHH--HHHHHHHH--HHHHhCCCCcEeeeeeeeecCC
Confidence            468999999999999999999976544      4799999965432  23333332  2455569999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|++|||++| +|.+.+. .....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....
T Consensus        72 ~~~l~~e~~~~~~L~~~l~-~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~  150 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMK-ITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT  150 (256)
T ss_pred             cEEEEEecCCCCcHHHHHH-hCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence            99999999996 5555543 345788999999999999999999999999999999999999999999999999988764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~  277 (620)
                      ..   ........|+..|+|||++.+.   .++.++|+||||+++|+|++|+.||......+....+.... .....+..
T Consensus       151 ~~---~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T cd06612         151 DT---MAKRNTVIGTPFWMAPEVIQEI---GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEK  224 (256)
T ss_pred             cC---ccccccccCCccccCHHHHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhh
Confidence            32   1122344689999999998644   68889999999999999999999998776655443332211 11223456


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.++|.+||+.||++||++.++++
T Consensus       225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            7889999999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-35  Score=304.22  Aligned_cols=253  Identities=22%  Similarity=0.318  Sum_probs=199.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.++...... .......+. ..++.++|+||+++++++..++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~------~~v~vK~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~   73 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATG------EIVAIKKFKESEDDEDVKKTALREV-KVLRQLRHENIVNLKEAFRRKG   73 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCC------cEEEEehhhhhcccccchhHHHHHH-HHHHhcCCCCeeehhheEEECC
Confidence            47999999999999999999976654      479999987543222 112222222 3556678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|++|||+++++++.+.. +...+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        74 ~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          74 RLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            9999999999888877654 445689999999999999999999999999999999999999999999999999887643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc----------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ----------  269 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~----------  269 (620)
                      ...  .......++..|+|||++.+.  ..++.++|+||||+++|+|++|.+||.+.+..+.+..+....          
T Consensus       153 ~~~--~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (288)
T cd07833         153 RPA--SPLTDYVATRWYRAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL  228 (288)
T ss_pred             Ccc--ccccCcccccCCcCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh
Confidence            221  123345789999999998643  257889999999999999999999998766544333222100          


Q ss_pred             ----------CCC----------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 ----------EIP----------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ----------~~~----------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                ..+          ..+..++.++.++|++||..+|++||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                      000          123345899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.6e-35  Score=304.06  Aligned_cols=251  Identities=20%  Similarity=0.289  Sum_probs=199.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +|++.++||+|+||.||+|++..++      ..||||+++...... ......+ . .+++.++|+||+++++++...+.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~E-~-~~l~~l~h~~i~~~~~~~~~~~~   72 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTG------EIVALKEIHLDAEEGTPSTAIRE-I-SLMKELKHENIVRLHDVIHTENK   72 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCC------eEEEEEEecccccccchHHHHHH-H-HHHHhhcCCCEeeeeeeEeeCCc
Confidence            5899999999999999999976554      489999997654322 2222222 2 24556689999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .||||||++|++.+.+.... ...+++..+..++.||+.||.|||+.+++|+||||+||++++++.++|+|||+++....
T Consensus        73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          73 LMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI  152 (284)
T ss_pred             EEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence            99999999999888776432 25689999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------  272 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-------  272 (620)
                      .   ........+|+.|++||++.+.  ..++.++|+||||+++|+|++|..||.+.+..+.+..+......+       
T Consensus       153 ~---~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07836         153 P---VNTFSNEVVTLWYRAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPG  227 (284)
T ss_pred             C---ccccccccccccccChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHH
Confidence            1   1222344678999999998542  246789999999999999999999998877665555443221100       


Q ss_pred             ---------C-----------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------P-----------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------~-----------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                               .           +...+++++.+++.+||+.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                     0           11346788999999999999999999999986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=2.5e-35  Score=304.67  Aligned_cols=252  Identities=22%  Similarity=0.286  Sum_probs=194.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++.............++. ..++.++|+||+++++++..++.
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~~~~~   77 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRING------QLVALKVISMKTEEGVPFTAIREA-SLLKGLKHANIVLLHDIIHTKET   77 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCC------cEEEEEEecccCcCCCcHHHHHHH-HHHHhcCCCCEeEEEEEEecCCe
Confidence            67999999999999999999976655      379999986543322221122222 24556789999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|+||||+.+++++.+.. ....+++..+..++.||+.||.|||+.+|+|+||||+|||++.++.++|+|||+++.....
T Consensus        78 ~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          78 LTFVFEYMHTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             EEEEEecccCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence            999999999988887754 3456788899999999999999999999999999999999999999999999998764321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC--------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEI--------  271 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~--------  271 (620)
                         ........+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+.. +.+..+......        
T Consensus       157 ---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (291)
T cd07870         157 ---SQTYSSEVVTLWYRPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG  231 (291)
T ss_pred             ---CCCCCCccccccccCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence               1222344679999999998632  24778999999999999999999999765432 222222110000        


Q ss_pred             -------------CCCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 -------------PPIP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 -------------~~~p---------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                   ...+         ...+.++.+++.+|++.||++|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                         0000         123678999999999999999999999886

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.7e-35  Score=297.64  Aligned_cols=250  Identities=21%  Similarity=0.310  Sum_probs=202.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE--C
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI--N  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--~  118 (620)
                      +|++.+.||.|+||.||+|.+..++      ..||+|.++...... .......+. ..++.++|+||+++++++..  +
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~   73 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDG------KILVWKEIDYGNMTEKEKQQLVSEV-NILRELKHPNIVRYYDRIIDRSN   73 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCC------CEEEEEEEecccCCHHHHHHHHHHH-HHHHhcCCCccceeeeeeecCCC
Confidence            5899999999999999999976655      479999987543222 121122222 35677799999999998764  4


Q ss_pred             CEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeecccCCcEEEccCCcEEEec
Q 007046          119 GKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLH-----SKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLH-----s~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ...|++|||++ ++|.+.+...  ...++++..++.++.||+.||.|||     +.+++|+||||+||+++.++.++|+|
T Consensus        74 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d  153 (265)
T cd08217          74 QTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGD  153 (265)
T ss_pred             CEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEec
Confidence            56899999998 5666666543  2467899999999999999999999     88999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||++.......   .......|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..++.+.+... .
T Consensus       154 ~g~~~~~~~~~---~~~~~~~~~~~~~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~  226 (265)
T cd08217         154 FGLAKILGHDS---SFAKTYVGTPYYMSPEQLNHM---SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-K  226 (265)
T ss_pred             ccccccccCCc---ccccccccCCCccChhhhcCC---CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-C
Confidence            99998764321   113345789999999998643   5788999999999999999999999988877766666543 3


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.++..++.++.+++.+||..+|++||++.+|++
T Consensus       227 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         227 FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            45677889999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=303.01  Aligned_cols=269  Identities=20%  Similarity=0.283  Sum_probs=211.3

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ....+|+-++|++.++||+|||+-||+++...++      +.||+|++...+.+..+..+++.  ...+..+||||.+++
T Consensus        13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~------~~YAlKkI~c~~~~~~e~~~rEi--d~~rkf~s~~vl~l~   84 (302)
T KOG2345|consen   13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTG------HLYALKKILCHSQEDIEEALREI--DNHRKFNSPNVLRLV   84 (302)
T ss_pred             CCcEEEcCceEEEeeeecCCCceeeeeecccCcc------cchhhheeeccchHHHHHHHHHH--HHHHhhCCcchHHHH
Confidence            3466899999999999999999999999865554      58999999887755555444443  356778999999988


Q ss_pred             EEEEECC-----EEEEEEecCC-CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEcc
Q 007046          113 GISVING-----KICIIMKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNE  182 (620)
Q Consensus       113 g~~~~~~-----~~~IVmE~~~-GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~  182 (620)
                      ++...+.     ..||++.|+. |+++|.+.+.+  +..+++.+.+.|+.+|++||++||+..  ++||||||.|||+.+
T Consensus        85 dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~  164 (302)
T KOG2345|consen   85 DHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD  164 (302)
T ss_pred             HHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence            8765433     4999999997 89999987653  457999999999999999999999998  999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCC------CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSS------DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR  256 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~------~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~  256 (620)
                      .+.++|.|||.++...-.-....      .......|..|.|||.+.-+.+..++.++|||||||+||+|+.|..||...
T Consensus       165 ~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~  244 (302)
T KOG2345|consen  165 SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI  244 (302)
T ss_pred             CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH
Confidence            99999999999876421000000      111234788999999999888888999999999999999999999999632


Q ss_pred             CHH--HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          257 SVD--EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       257 ~~~--ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      -..  .+.-.+...+...+-...+|..+.++|+.||+.||.+||++.+++..+..
T Consensus       245 ~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  245 YQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             hhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            111  11111222222222334589999999999999999999999999986654

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.7e-35  Score=303.99  Aligned_cols=260  Identities=22%  Similarity=0.360  Sum_probs=200.7

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ||+|+||+||+|.+..++      +.||+|.+.......   ...+.. + ..+++.++|+||+++++++...+..|+||
T Consensus         1 lg~g~~g~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~-e-~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   72 (277)
T cd05577           1 LGKGGFGEVCACQVKATG------KMYACKKLDKKRLKKRKGEQMALN-E-KKILEKVSSRFIVSLAYAFETKDDLCLVM   72 (277)
T ss_pred             CCCCCceeEEEEEEcCCC------cEEEEEEEehhhhhhhhhhHHHHH-H-HHHHHhCCCCCEeeeeeEEecCCeEEEEE
Confidence            699999999999876554      479999997543211   112222 2 23566778999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++ ++|.+.+.......+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....    .
T Consensus        73 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~----~  148 (277)
T cd05577          73 TLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG----G  148 (277)
T ss_pred             ecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc----C
Confidence            9999 4666666543445799999999999999999999999999999999999999999999999999876532    1


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhccCCCCCCCCCCH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      .......++..|+|||++.+.   .++.++|+||||+++|+|++|+.||.....    .++...+.  ......+..+++
T Consensus       149 ~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  223 (277)
T cd05577         149 KKIKGRAGTPGYMAPEVLQGE---VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSP  223 (277)
T ss_pred             CccccccCCCCcCCHHHhcCC---CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCH
Confidence            222345688999999998643   478899999999999999999999976543    22222221  223446677899


Q ss_pred             HHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCC
Q 007046          281 AVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKS  325 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~  325 (620)
                      ++.++|.+||+.||++||     ++.++++ .+....+|.........+|+
T Consensus       224 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~  274 (277)
T cd05577         224 EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPF  274 (277)
T ss_pred             HHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCC
Confidence            999999999999999999     7777876 45555666655544443333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-35  Score=303.60  Aligned_cols=249  Identities=22%  Similarity=0.333  Sum_probs=196.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc--CCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ--GVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~--~h~nIv~l~g~~~~~~  119 (620)
                      .|++.+.||+|+||.||+|.+..++      +.||+|.++.............+..++..+.  .|+|++++++++..+.
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~   75 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTG------RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP   75 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCC------cEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC
Confidence            4788899999999999999976554      4899999876433222222222222333322  5999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++| +|.+.+.   .+.+++..++.++.|++.||.|||+.+|+|+||+|+||+++.++.++|+|||++..+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          76 RLWIIMEYAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             EEEEEEecCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence            99999999986 5554442   3478999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC-C
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS-G  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~-~  277 (620)
                      ...   .......|+..|+|||.+.+.  ..++.++|+||||+++|+|++|..||...........+... ..+.++. .
T Consensus       153 ~~~---~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  226 (277)
T cd06917         153 QNS---SKRSTFVGTPYWMAPEVITEG--KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNG  226 (277)
T ss_pred             CCc---cccccccCCcceeCHHHhccC--CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCccc
Confidence            322   222345799999999998532  24678999999999999999999999887765554433222 2334444 3


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.+++.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         227 YSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            8899999999999999999999999987

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.4e-35  Score=305.59  Aligned_cols=251  Identities=19%  Similarity=0.224  Sum_probs=198.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh----HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED----RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~----~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +|++.+.||+|+||.||+|.+..++      +.||||.++.....    ........+. ..++.++|+||+++++++..
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~~~~~~~~~   73 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETG------RIVAIKKIKLGERKEAKDGINFTALREI-KLLQELKHPNIIGLLDVFGH   73 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCC------cEEEEEEEeccccccccchhhHHHHHHH-HHHhhcCCCCChhhhheeec
Confidence            5889999999999999999976654      48999999765432    1111112222 25566789999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++..|+||||+.|+|.+.+.. ....+++..+..++.||++||.|||+++++|+||||+||+++.++.++|+|||+++..
T Consensus        74 ~~~~~lv~e~~~~~L~~~i~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~  152 (298)
T cd07841          74 KSNINLVFEFMETDLEKVIKD-KSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSF  152 (298)
T ss_pred             CCEEEEEEcccCCCHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence            999999999997788777753 2247999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----  272 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-----  272 (620)
                      ...   ........+++.|+|||.+.+.  ..++.++|+|||||++|+|++|.+||.+.+..+.+..+......+     
T Consensus       153 ~~~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (298)
T cd07841         153 GSP---NRKMTHQVVTRWYRAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW  227 (298)
T ss_pred             cCC---CccccccccceeeeCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence            432   1222334678899999988532  357889999999999999999988888777655554443221110     


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           .....++.++.++|.+||..||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                                 011345788999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.2e-35  Score=301.07  Aligned_cols=254  Identities=20%  Similarity=0.324  Sum_probs=204.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch----------hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE----------DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~----------~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      +|++.+.||+|+||.||+|.+..+.     ++.+|+|.+.....          .....+.. +...+.+..+|+||+++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~l~~~~~h~~i~~~   74 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNG-----QNLLALKEINVHNPAFGKDKRERDKSIGDIVS-EVTIIKEQLRHPNIVRY   74 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCC-----CceeeeeEeeccccccccccccchHHHHHHHH-HHHHHhhcCCCCCeeeE
Confidence            4788999999999999999986522     25799998864321          11122222 22234456799999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEE
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vk  187 (620)
                      ++++..++..|++|||++| ++.+.+...  ....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~  154 (269)
T cd08528          75 YKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVT  154 (269)
T ss_pred             EeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEE
Confidence            9999999999999999985 676766443  34678999999999999999999996 6899999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||++.......    ......|+..|+|||++.+   +.++.++|+||||+++|+|++|..||...........+..
T Consensus       155 l~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~---~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~  227 (269)
T cd08528         155 ITDFGLAKQKQPES----KLTSVVGTILYSCPEIVKN---EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE  227 (269)
T ss_pred             Eecccceeeccccc----ccccccCcccCcChhhhcC---CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh
Confidence            99999998754321    3345678999999999864   3578899999999999999999999988877777766665


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ....+.....+++++.++|.+||+.||++||++.++..++.
T Consensus       228 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         228 AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            54444334478899999999999999999999999988664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.3e-35  Score=310.26  Aligned_cols=249  Identities=21%  Similarity=0.238  Sum_probs=185.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--CCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--NGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--~~~~~IV  124 (620)
                      .+||+|+||.||+|++....    .+..||+|.++.....  .....+ . .+++.++|+||+++++++..  +..+|+|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~----~~~~~a~k~~~~~~~~--~~~~~E-~-~~l~~l~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGK----DEKEYALKQIEGTGIS--MSACRE-I-ALLRELKHPNVIALQKVFLSHSDRKVWLL   78 (317)
T ss_pred             eEeccCCCeeEEEEEecCCC----ccceEEEEEecCCCCc--HHHHHH-H-HHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence            57999999999999865432    3358999998754322  112222 2 35666799999999998854  5678999


Q ss_pred             EecCCCChHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE----ccCCcEEEeccCC
Q 007046          125 MKFYEGSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGI  193 (620)
Q Consensus       125 mE~~~GsLld~l~~~~-------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl----d~~~~vkL~DFGl  193 (620)
                      |||+++++.+.+....       ...+++..+..++.||+.||.|||+.+|+||||||+|||+    +.++.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            9999999888775321       2358899999999999999999999999999999999999    5567999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHH
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------EIYDA  264 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---------ei~~~  264 (620)
                      ++................||+.|+|||++.+.  ..++.++|+|||||++|||+||.+||......         ..+..
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~  236 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR  236 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHH
Confidence            98764332222334456789999999998642  24788999999999999999999999653311         01111


Q ss_pred             HHhccC------------C------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQE------------I------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~~------------~------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.....            .                        .......+..+.+|+.+||..||.+|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             HHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            110000            0                        0011123567889999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.6e-35  Score=303.46  Aligned_cols=262  Identities=20%  Similarity=0.328  Sum_probs=201.5

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ..++|++.+.||+|+||.||+|++...+  ...+..||+|+++..... ....+..+.  ..++.+.|+||+++++++..
T Consensus         2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~ei--~~l~~l~~~~i~~~~~~~~~   77 (284)
T cd05038           2 EKRHLKFIKQLGEGHFGKVELCRYDPLG--DNTGEQVAVKSLNHSGEEQHRSDFEREI--EILRTLDHENIVKYKGVCEK   77 (284)
T ss_pred             chhhchhheeeccCCCeeEEEeeecCCC--CCCceEEEEEEeccccchHHHHHHHHHH--HHHHhCCCCChheEEeeeec
Confidence            3467899999999999999999875432  234568999999866554 223333332  24566789999999999877


Q ss_pred             --CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 --NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 --~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                        ....|++|||++ +++.+.+.. ....+++..+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  156 (284)
T cd05038          78 PGGRSLRLIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA  156 (284)
T ss_pred             CCCCceEEEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence              557999999998 466666643 3346899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------------
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------------  259 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---------------  259 (620)
                      .................++..|++||.+.+.   .++.++|+||||+++|||++|..|+......               
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd05038         157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTS---KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT  233 (284)
T ss_pred             cccccCCcceeccCCCCCcccccCcHHHccC---CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHH
Confidence            8764221111111123456679999998643   6888999999999999999999998653221               


Q ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+.. ..........+..++.++.+++.+||..+|++||++.++++.|..
T Consensus       234 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         234 RLLE-LLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             HHHH-HHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            1222 222333344567788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-35  Score=298.36  Aligned_cols=253  Identities=27%  Similarity=0.394  Sum_probs=201.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch----hHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE----DRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~----~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      +.+|++.+.||+|+||.||+|++..++      ..||+|.+.....    ......+..+. .+++.++|+||+++++++
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~~~ei-~~l~~l~h~~i~~~~~~~   73 (264)
T cd06653           1 PVNWRLGKLLGRGAFGEVYLCYDADTG------RELAVKQVPFDPDSQETSKEVNALECEI-QLLKNLRHDRIVQYYGCL   73 (264)
T ss_pred             CCceeeeeeEccCCCeEEEEEEEcCCC------CEEEEEEEecCcccchhhHHHHHHHHHH-HHHHHcCCCCcceEEEEE
Confidence            468999999999999999999976554      4899999854321    11111122222 256667899999999998


Q ss_pred             EEC--CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VIN--GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~~--~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ...  ..++++|||++| +|.+.+.  ....+++..++.++.||+.||.|||+.+++|+||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg  151 (264)
T cd06653          74 RDPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG  151 (264)
T ss_pred             EcCCCCEEEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccc
Confidence            763  568999999985 5666654  34568999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++................|+..|+|||++.+.   .++.++|+|||||++|+|++|+.||......+....+......+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  228 (264)
T cd06653         152 ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE---GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP  228 (264)
T ss_pred             cccccccccccCccccccCCcccccCHhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCC
Confidence            998764322112223345789999999998643   57789999999999999999999998877666555555444556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+|..+++++.+++.+||. +|..||++.+++.
T Consensus       229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            6788999999999999998 5799999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=3.8e-35  Score=307.87  Aligned_cols=247  Identities=21%  Similarity=0.288  Sum_probs=201.3

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      |...++||+|+||.||+|++..++      ..||+|.+......   ....+..+.  ..++..+|+|++++++++....
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~------~~v~ik~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~~   94 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTN------EVVAVKKMSYSGKQTNEKWQDIIKEV--KFLQQLKHPNTIEYKGCYLKEH   94 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCC------cEEEEEEEeccccCchHHHHHHHHHH--HHHHhCCCCCCccEEEEEEeCC
Confidence            667788999999999999876554      47999998754322   222232322  2556678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||+.|++.+.+.. ...++++..+..++.||+.+|.|||++|++|+||+|+||+++.++.++|+|||++.... 
T Consensus        95 ~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-  172 (313)
T cd06633          95 TAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-  172 (313)
T ss_pred             EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-
Confidence            9999999999998888764 45678999999999999999999999999999999999999999999999999876431 


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                            ......|+..|+|||++.....+.++.++|+||||+++|+|++|..||...+.......+............++
T Consensus       173 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (313)
T cd06633         173 ------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWT  246 (313)
T ss_pred             ------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccC
Confidence                  22345789999999998543234688899999999999999999999988776665555544433333345678


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+++++.+||+++|.+||++.+++.
T Consensus       247 ~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         247 DSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            89999999999999999999999996

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-35  Score=298.92  Aligned_cols=241  Identities=21%  Similarity=0.328  Sum_probs=193.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHH--HHHHHHHHHHccCCCceeEeEEEEEECCEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--LERLNDLFLKCQGVEGICWLQGISVINGKICII  124 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~--~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IV  124 (620)
                      +.||+|+||.||+|.+..++      +.||+|+++..........  ...+........+|+|++++++++..++.+|+|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTG------DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLV   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCC------CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEE
Confidence            56999999999999976554      4799999975432221111  122222345556899999999999999999999


Q ss_pred             EecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC
Q 007046          125 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       125 mE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~  203 (620)
                      |||++| +|.+++.  ....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||+++....    
T Consensus        76 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----  149 (260)
T cd05611          76 MEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----  149 (260)
T ss_pred             EeccCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence            999985 5655554  345789999999999999999999999999999999999999999999999999876422    


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--CCCCCCCCCHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--IPPIPSGLPPA  281 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~--~~~~p~~~s~~  281 (620)
                         .....|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+.....  .......++++
T Consensus       150 ---~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05611         150 ---NKKFVGTPDYLAPETILGV---GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPE  223 (260)
T ss_pred             ---cccCCCCcCccChhhhcCC---CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHH
Confidence               2345688999999998644   478899999999999999999999998888777776654432  22344568999


Q ss_pred             HHHHHHHhhhcCcCCCCCH---HHHHH
Q 007046          282 VENVLLGCFEYDLRSRPLM---TDILR  305 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~---~eil~  305 (620)
                      +.+++.+||..||++||++   ++++.
T Consensus       224 ~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         224 AVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             HHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            9999999999999999965   56655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-35  Score=303.89  Aligned_cols=250  Identities=22%  Similarity=0.270  Sum_probs=197.9

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      |++.+.||.|++|.||+|.+..++      ..||+|++.......  ...+..+.  ..++..+|+|++++++++..++.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~E~--~~l~~l~~~~iv~~~~~~~~~~~   72 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTG------EIVALKKIRLETEDEGVPSTAIREI--SLLKELNHPNIVRLLDVVHSENK   72 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCC------CEEEEEEeecccccccchhHHHHHH--HHHHhcCCCCccCHhheeccCCe
Confidence            678899999999999999976654      479999987543221  12233322  25566789999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|++|||+++++.+.+.......+++..++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||+++.... 
T Consensus        73 ~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~-  151 (283)
T cd07835          73 LYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGV-  151 (283)
T ss_pred             EEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCC-
Confidence            9999999998888887654445789999999999999999999999999999999999999999999999999875522 


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---------  271 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~---------  271 (620)
                        .........+++.|+|||++.+.  ..++.++|+||||+++|+|++|.+||...+....+..+......         
T Consensus       152 --~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (283)
T cd07835         152 --PVRTYTHEVVTLWYRAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV  227 (283)
T ss_pred             --CccccCccccccCCCCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence              11222334678999999987532  24688999999999999999999999877665443333221100         


Q ss_pred             ------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                        ......++.++.++|.+||+.||++||+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         228 TSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                              1123467789999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=3.1e-35  Score=298.78  Aligned_cols=250  Identities=21%  Similarity=0.250  Sum_probs=202.4

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      ||.|+||.||+|++..++      ..||+|++......  .....+..+. .+++.++|+||+++++++..+..+|++||
T Consensus         1 lg~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   73 (262)
T cd05572           1 LGVGGFGRVELVKVKSKN------RTFALKCVKKRHIVETGQQEHIFSEK-EILEECNHPFIVKLYRTFKDKKYIYMLME   73 (262)
T ss_pred             CCCCCceEEEEEEECCCC------cEEEEEEEehhcchhhhHHHHHHHHH-HHHHhCCCCCEeeeeeeEEcCCccEEEEe
Confidence            799999999999986544      48999999764422  2222222222 25566799999999999999999999999


Q ss_pred             cCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++ ++|.+.+.  +...+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||+++......    
T Consensus        74 ~~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----  147 (262)
T cd05572          74 YCLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----  147 (262)
T ss_pred             cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----
Confidence            998 56666664  34568999999999999999999999999999999999999999999999999998764321    


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhccCCCCCCCCCCHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPSGLPPAVE  283 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~--~~ei~~~i~~~~~~~~~p~~~s~~l~  283 (620)
                      ......|++.|++||.+.+   ..++.++|+||||+++|+|++|..||....  ..+.+..+.........|..+++++.
T Consensus       148 ~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05572         148 KTWTFCGTPEYVAPEIILN---KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAK  224 (262)
T ss_pred             ccccccCCcCccChhHhcC---CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHH
Confidence            2234578999999999863   357889999999999999999999998776  66777777655556677888899999


Q ss_pred             HHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCC
Q 007046          284 NVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWT  314 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~  314 (620)
                      ++|.+||..||++||+     ++|+++ .+.+..+|.
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence            9999999999999999     889987 444444553

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=7.8e-36  Score=310.06  Aligned_cols=249  Identities=19%  Similarity=0.296  Sum_probs=199.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|.....||+|+||.||++.+..++      ..||||.+..........+..+.  ..++..+|+||+++++.+...+.
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~--~~l~~l~h~~ii~~~~~~~~~~~   93 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTG------KQVAVKKMDLRKQQRRELLFNEV--VIMRDYHHENVVDMYNSYLVGDE   93 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCC------CEEEEEEEecchHHHHHHHHHHH--HHHHhCCCCcHHHHHHheecCCe
Confidence            45666788999999999999876554      47999998654443333333333  25566799999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|+||||++|+++..+.  ..+.+++..+..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++......
T Consensus        94 ~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (292)
T cd06658          94 LWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE  171 (292)
T ss_pred             EEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence            99999999965444433  3457899999999999999999999999999999999999999999999999998765321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLP  279 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~s  279 (620)
                         ........||+.|+|||.+.+.   .++.++|+||||+++|||++|..||...+..+.+..+..... .......++
T Consensus       172 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T cd06658         172 ---VPKRKSLVGTPYWMAPEVISRL---PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVS  245 (292)
T ss_pred             ---cccCceeecCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccC
Confidence               1222345789999999998643   578899999999999999999999988777666655543221 112234578


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.+++.+||..||.+||+++++++
T Consensus       246 ~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         246 SVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            99999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.8e-35  Score=295.20  Aligned_cols=248  Identities=23%  Similarity=0.352  Sum_probs=197.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      ++||+|+||.||+|.+.. +      +.||+|.+..............+. .+++.++|+||+++++++......|+|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~------~~v~~K~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   72 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-N------TEVAVKTCRSTLPPDLKRKFLQEA-EILKQYDHPNIVKLIGVCVQKQPIYIVME   72 (251)
T ss_pred             CccccCCCceEEEEEEeC-C------CcEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCeEEEEEEEecCCCeEEEEE
Confidence            469999999999998654 3      479999987654432222222222 25667789999999999999999999999


Q ss_pred             cCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      |++| ++.+.+.. ....+++..++.++.|++.+|.|||+++++||||||+|||++.++.++|+|||+++....... ..
T Consensus        73 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~  150 (251)
T cd05041          73 LVPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-TV  150 (251)
T ss_pred             cCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc-ee
Confidence            9985 55555543 445789999999999999999999999999999999999999999999999999876532111 11


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      ......++..|+|||.+.+   +.++.++|+||||+++|+|+| |..||...........+... .....+..++.++.+
T Consensus       151 ~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  226 (251)
T cd05041         151 SDGLKQIPIKWTAPEALNY---GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMPAPQLCPEEIYR  226 (251)
T ss_pred             ccccCcceeccCChHhhcc---CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCCCCccCCHHHHH
Confidence            1112234677999999864   368889999999999999999 89999888877766666433 344457788999999


Q ss_pred             HHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          285 VLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ++.+||..+|++||++.++++.|.
T Consensus       227 li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         227 LMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHhccChhhCcCHHHHHHHhh
Confidence            999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=9.9e-35  Score=336.38  Aligned_cols=258  Identities=22%  Similarity=0.245  Sum_probs=195.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HH-HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RM-RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.++||+|+||.||+|++..++      +.||||+++.....  .. ..+..+ . .+++.++||||+++++++..
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg------~~VAIK~I~~~l~~~e~~~~rflrE-i-~ILs~L~HPNIVkl~~v~~d   73 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCS------RRVALKKIREDLSENPLLKKRFLRE-A-KIAADLIHPGIVPVYSICSD   73 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCC------cEEEEEEECcccccCHHHHHHHHHH-H-HHHHhCCCcCcCeEEEEEee
Confidence            58999999999999999999976655      47999999754322  11 222222 2 35667789999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLK---------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~---------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      ++..|++|||++| +|.+.+....         ...++...++.++.||+.||+|||++||+||||||+|||++.++.++
T Consensus        74 ~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK  153 (932)
T PRK13184         74 GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV  153 (932)
T ss_pred             CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE
Confidence            9999999999995 6666654321         13456677889999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCC---------------CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 007046          188 LGDVGIPHLLLGIPL---------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP  252 (620)
Q Consensus       188 L~DFGla~~~~~~~~---------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P  252 (620)
                      |+|||+++.......               ........+||+.|||||++.+.   .++.++|+|||||++|||+||..|
T Consensus       154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~---~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV---PASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC---CCCcHhHHHHHHHHHHHHHHCCCC
Confidence            999999987621110               00111235799999999998644   688999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-HHHHHHHHHh
Q 007046          253 RCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPL-MTDILRVFKS  309 (620)
Q Consensus       253 f~~~~~~ei~~~i~~~~-~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs-~~eil~~L~~  309 (620)
                      |......++........ ........+|+.+.+++.+||+.||++||+ ++++++.|+.
T Consensus       231 F~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        231 YRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             CCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            98765544332211111 011112468899999999999999999975 5556655544

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.4e-35  Score=305.17  Aligned_cols=256  Identities=21%  Similarity=0.264  Sum_probs=196.5

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|++.++||+|+||.||+|.+..++      +.||||.+........  .....+.  .+++.++|+||+++++++.
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~aik~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~   81 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTK------QIVALKKVLMENEKEGFPITALREI--KILQLLKHENVVNLIEICR   81 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCC------cEEEEEEEeccCCcCCchhHHHHHH--HHHHhCCCCCccceEEEEe
Confidence            4567999999999999999999976654      4899999865432211  1112222  3566779999999999987


Q ss_pred             ECC--------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          117 ING--------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       117 ~~~--------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      ...        ..|+||||+.+++.+.+.. ....+++.+++.++.||+.||+|||+++++|+||||+||+++.++.+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl  160 (310)
T cd07865          82 TKATPYNRYKGSFYLVFEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKL  160 (310)
T ss_pred             cccccccCCCceEEEEEcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEE
Confidence            643        4699999999988887754 3457899999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|||++..+...... ........++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+.......+..
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~  238 (310)
T cd07865         161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQ  238 (310)
T ss_pred             CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999876432211 1222345688999999988643  2367899999999999999999999988776544433322


Q ss_pred             ccCC--C---------------CC-------------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEI--P---------------PI-------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~--~---------------~~-------------p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....  +               ..             +...+..+.++|.+||..||.+||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            1100  0               00             1123567889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-35  Score=307.25  Aligned_cols=256  Identities=21%  Similarity=0.251  Sum_probs=195.5

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc---hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.++||+|+||.||+|.+...    ..+..||+|.+....   .........+.  .++...+||||+++++++...
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~   74 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG----KDGKEYAIKKFKGDKEQYTGISQSACREI--ALLRELKHENVVSLVEVFLEH   74 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC----CCCCeEEEEEeccccccccCccHHHHHHH--HHHHhcCCCCccceEEEEeCC
Confidence            488999999999999999997652    123589999998633   11112222222  255667899999999999988


Q ss_pred             --CEEEEEEecCCCChHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc----CCcEEEe
Q 007046          119 --GKICIIMKFYEGSVGDRMAQLKG---GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----ADRAVLG  189 (620)
Q Consensus       119 --~~~~IVmE~~~GsLld~l~~~~~---~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~----~~~vkL~  189 (620)
                        ..+|+||||+++++.+.+.....   ..+++..++.++.||+.||.|||+.+|+||||||+||+++.    ++.+||+
T Consensus        75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~  154 (316)
T cd07842          75 ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG  154 (316)
T ss_pred             CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEEC
Confidence              88999999999998887754322   37899999999999999999999999999999999999999    8999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---------
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---------  260 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e---------  260 (620)
                      |||+++................+|+.|+|||.+.+.  ..++.++|+||||+++|+|++|.+||.+.....         
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  232 (316)
T cd07842         155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD  232 (316)
T ss_pred             CCccccccCCCcccccccCCccccccccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence            999998764322212223345789999999987532  247889999999999999999999997654321         


Q ss_pred             HHHHHHh------------------------ccCCCCCC-----------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          261 IYDAVVR------------------------RQEIPPIP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       261 i~~~i~~------------------------~~~~~~~p-----------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+..                        .......+           ...+.++.+++.+||+.||++||++.++++
T Consensus       233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            1111100                        00111111           156778999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=7.5e-36  Score=306.38  Aligned_cols=247  Identities=23%  Similarity=0.353  Sum_probs=199.5

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .|+..+.||+|+||.||+|.+..++      ..||+|.+..............+. ..++.++|+||+++++++..+...
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~   77 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTK------EVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYITRYYGSYLKGTKL   77 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCC------eEEEEEEeccccchHHHHHHHHHH-HHHHcCCCCccHhhhcccccCCce
Confidence            4677788999999999999876544      479999987554333333333333 355667899999999999999999


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |+||||++| ++.+.+   ..+.+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||+++.+...
T Consensus        78 ~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06642          78 WIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEEEccCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence            999999995 454444   3467899999999999999999999999999999999999999999999999998766432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCH
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      .   .......|+..|+|||++.+.   .++.++|+||||+++|||++|..||...........+. ....+..+..++.
T Consensus       155 ~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  227 (277)
T cd06642         155 Q---IKRNTFVGTPFWMAPEVIKQS---AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYSK  227 (277)
T ss_pred             c---hhhhcccCcccccCHHHhCcC---CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccCH
Confidence            1   122234689999999998644   57889999999999999999999998766665555443 2334455667899


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.+++.+||..+|++||++.++++
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         228 PFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=5.8e-35  Score=300.08  Aligned_cols=247  Identities=21%  Similarity=0.332  Sum_probs=200.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      -|++.++||+|+||.||+|.+..++      ..||+|++..............+. ..+...+|+||+++++++..++..
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~   77 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQ------KVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYVTKYYGSYLKDTKL   77 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCC------cEEEEEEeccccchHHHHHHHHHH-HHHHhcCCCCEeEEEEEEEeCCeE
Confidence            3778899999999999999876554      489999986544333222222222 255667999999999999999999


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |+||||++| ++.+.+   ....+++..+..++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||++..+...
T Consensus        78 ~lv~e~~~~~~l~~~i---~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06641          78 WIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEEEeCCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence            999999996 444444   3457899999999999999999999999999999999999999999999999998766432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCH
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  280 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~  280 (620)
                      .   .......|+..|+|||++.+.   .++.++|+|||||++|+|++|..||...........+.. ...+.++..++.
T Consensus       155 ~---~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  227 (277)
T cd06641         155 Q---IKRNTFVGTPFWMAPEVIKQS---AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSK  227 (277)
T ss_pred             h---hhhccccCCccccChhhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-CCCCCCCcccCH
Confidence            1   122335689999999998643   577899999999999999999999988777666665533 344556778899


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.+++.+||..+|.+||++.++++
T Consensus       228 ~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         228 PLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1e-34  Score=300.13  Aligned_cols=255  Identities=21%  Similarity=0.312  Sum_probs=198.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      .++|.+.+.||+|+||.||+|.+..++      +.+|+|++......  ......+..++.+..+|+|++++++++... 
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~------~~~aik~~~~~~~~--~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~   92 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDG------SLAAVKILDPISDV--DEEIEAEYNILQSLPNHPNVVKFYGMFYKAD   92 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCC------CEEEEEEecccccH--HHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence            577999999999999999999976554      47999999654322  122223333444555899999999998753 


Q ss_pred             ----CEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          119 ----GKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       119 ----~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                          +.+|+||||++| +|.+++...  ....+++..++.++.|++.||+|||+.+++|+||||+||+++.++.++|+||
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~df  172 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDF  172 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeec
Confidence                368999999985 665655432  3467899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |+++......   .......|++.|+|||.+....  ...++.++|+|||||++|||++|+.||......+.+..+....
T Consensus       173 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~  249 (291)
T cd06639         173 GVSAQLTSTR---LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP  249 (291)
T ss_pred             ccchhccccc---ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence            9988654321   1123346899999999975321  1236789999999999999999999998877655554443322


Q ss_pred             C-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 E-IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~-~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      . ....+...+.++.++|.+||+.+|++||++.++++
T Consensus       250 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         250 PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            1 11234567789999999999999999999999987

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=8.4e-35  Score=297.70  Aligned_cols=254  Identities=20%  Similarity=0.249  Sum_probs=192.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ++||+|+||.||+|......    ....+++|.+........ ..+.++.  ..++.++||||+++++.+......|+||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~--~~~~~l~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDT----GVARVVVKELKANASSKEQNEFLQQG--DPYRILQHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCC----CcceEEEEEecCCCChHHHHHHHHHH--HHHhccCCcchhheEEEecCCCccEEEE
Confidence            36999999999999764332    124577887765443222 2233322  3456679999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          126 KFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       126 E~~~-GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||++ |+|.+.+....  ...+++..+..++.||+.||+|||+.+++||||||+|||++.++.++|+|||++....... 
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~-  153 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED-  153 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch-
Confidence            9999 57777765432  2346777888999999999999999999999999999999999999999999986432111 


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCC----CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC----CCC
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEV----RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IPP  273 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~----~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~----~~~  273 (620)
                      .........|++.|+|||++....    ...++.++|+||||+++|||++ |..||...+..+.+..+.....    .+.
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  233 (268)
T cd05086         154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ  233 (268)
T ss_pred             hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCc
Confidence            111223457899999999975321    2245778999999999999997 6789988777777666554432    234


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      ++..+++.+.+++..|| .+|++||++++|++.|.
T Consensus       234 ~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         234 LELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            55668899999999999 68999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=2.9e-35  Score=307.84  Aligned_cols=249  Identities=20%  Similarity=0.290  Sum_probs=202.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +.|...+.||+|+||.||+|++..++      ..||+|.+.....   .....+..+.  .+++..+|+|++++++++..
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   86 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKEV--RFLQKLRHPNTIQYRGCYLR   86 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCC------cEEEEEEEecccccChHHHHHHHHHH--HHHHhCCCCCcccEEEEEEc
Confidence            44778899999999999999976554      4799999864322   2222333322  25566789999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ....|+||||+.|++.+.+.. ...++++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||++...
T Consensus        87 ~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634          87 EHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             CCeeEEEEEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence            999999999999988777653 4467899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..       .....|++.|+|||.+.+...+.++.++|+|||||++|+|++|..||...+..+....+.........+..
T Consensus       166 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06634         166 AP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH  238 (308)
T ss_pred             cC-------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCccc
Confidence            21       23456899999999975322345788999999999999999999999877766655555544433334557


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+.++|.+||..+|.+||++.++++
T Consensus       239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~  266 (308)
T cd06634         239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (308)
T ss_pred             ccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence            8899999999999999999999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=4.7e-35  Score=295.58  Aligned_cols=249  Identities=23%  Similarity=0.413  Sum_probs=201.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|.+.+.||+|+||.||+|.+..++      ..||+|.+.....  .....+.. +. ..++..+|+||+++++.+..++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~-E~-~~l~~~~h~~i~~~~~~~~~~~   72 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDS------EHCVIKEIDLTKMPVKEKEASKK-EV-ILLAKMKHPNIVTFFASFQENG   72 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCC------ceEEEEEeeHhhccchhhHHHHH-HH-HHHHhCCCCChhhhhheeccCC
Confidence            5899999999999999999986655      3799999865422  11222222 22 3566778999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCcccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~~~  197 (620)
                      ..|+||||++ ++|.+.+.......+++..+..++.|++.||.|||+.+++|+||||+||++++++ .++|+|||.+...
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~  152 (257)
T cd08225          73 RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL  152 (257)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence            9999999998 5777777654445689999999999999999999999999999999999999886 4699999998766


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ...   ........|++.|+|||++.+   ..++.++|+||||+++|+|++|..||...+..+....+.... ....+..
T Consensus       153 ~~~---~~~~~~~~~~~~~~ape~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~  225 (257)
T cd08225         153 NDS---MELAYTCVGTPYYLSPEICQN---RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-FAPISPN  225 (257)
T ss_pred             cCC---cccccccCCCccccCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-CCCCCCC
Confidence            321   112233468999999998853   357889999999999999999999998877766665554333 3345667


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.+++.+||..+|++||++.++++
T Consensus       226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         226 FSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            8999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-36  Score=320.42  Aligned_cols=264  Identities=20%  Similarity=0.292  Sum_probs=216.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -..+..+.+.+.++||+|-||.|.+++-.       ....||+|+++.+...+.+..+..+..++. .++||||+.++|+
T Consensus       532 l~EfPRs~L~~~ekiGeGqFGEVhLCeve-------g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLs-qLkhPNIveLvGV  603 (807)
T KOG1094|consen  532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVE-------GPLKVAVKILRPDATKNARNDFLKEIKILS-RLKHPNIVELLGV  603 (807)
T ss_pred             hhhcchhheehhhhhcCcccceeEEEEec-------CceEEEEeecCcccchhHHHHHHHHHHHHh-ccCCCCeeEEEee
Confidence            34578889999999999999999999743       346899999999888777555555554444 4599999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |..++.+|+||||++ |+|.+++....-..+.-....+|+.||+.|++||.+.+++||||.+.|+|++.++++||+|||+
T Consensus       604 C~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgm  683 (807)
T KOG1094|consen  604 CVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGM  683 (807)
T ss_pred             eecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccc
Confidence            999999999999999 8888888653223345567778999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhccC-
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVRRQE-  270 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~~~~~~ei~~~i~~~~~-  270 (620)
                      ++-+...+. .......+-..+|||+|.+.   .++++.++|+|+||+++||+++  ...||...+.+++.+....... 
T Consensus       684 sR~lysg~y-y~vqgr~vlpiRwmawEsil---lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~  759 (807)
T KOG1094|consen  684 SRNLYSGDY-YRVQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRD  759 (807)
T ss_pred             ccccccCCc-eeeecceeeeeeehhHHHHH---hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCC
Confidence            996643221 11122334568999999985   5579999999999999999865  8899999888887776543211 


Q ss_pred             -----CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 -----IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 -----~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                           .+..|.-||..+.++|.+||.+|-.+||+++++...|...
T Consensus       760 ~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  760 QGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                 2346788999999999999999999999999999877654

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.9e-35  Score=308.94  Aligned_cols=252  Identities=21%  Similarity=0.266  Sum_probs=202.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|++..++      ..||||.+.....  .....+..+.  ..++.++|+||+++++++....
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   72 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTG------RKVAIKKISNVFDDLIDAKRILREI--KLLRHLRHENIIGLLDILRPPS   72 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCC------cEEEEEeeccccccchhhhhHHHHH--HHHHhcCCcchhhhhhhhcccC
Confidence            5899999999999999999976554      4799999976542  2222232322  3556678999999999988765


Q ss_pred             -----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          120 -----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       120 -----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                           .+|++|||+++++.+.+.  +..++++..++.++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++
T Consensus        73 ~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~  150 (330)
T cd07834          73 PEDFNDVYIVTELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLA  150 (330)
T ss_pred             cccccceEEEecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence                 799999999988777775  3458999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-  273 (620)
                      .................+|+.|+|||.+.+..  .++.++|+||||+++|+|++|.+||.+.+..+.+..+......+. 
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  228 (330)
T cd07834         151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS--RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE  228 (330)
T ss_pred             EeecccccccccccccccccCcCCceeeeccc--CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence            87644321112234457899999999987532  578899999999999999999999998887766665544222111 


Q ss_pred             ----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                  ....++.++.++|++||+.+|.+||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                                        12346889999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=3.8e-35  Score=304.37  Aligned_cols=255  Identities=18%  Similarity=0.197  Sum_probs=198.5

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ..++|++.+.||+|+||.||+|++..++      +.||+|.++...... .......+. .+++.++|+||+++++++..
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~e~-~~~~~l~h~~i~~~~~~~~~   77 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTG------ELVALKKVRLDNEKEGFPITAIREI-KILRQLNHRNIVNLKEIVTD   77 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCC------cEEEEEEEeecccccCchHHHHHHH-HHHHhCCCCCeeeeeheecC
Confidence            3568999999999999999999986554      479999997543211 111111222 25566789999999999876


Q ss_pred             CC----------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          118 NG----------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       118 ~~----------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      ..          .+|+||||+++++.+.+.. ....+++..+..++.||+.||+|||+.+|+|+||||+||++++++.+|
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k  156 (302)
T cd07864          78 KQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK  156 (302)
T ss_pred             cchhhhccccCCcEEEEEcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence            54          7999999999988877754 345789999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||++........  .......+++.|+|||.+.+.  ..++.++|+|||||++|+|++|++||...+..+.+..+..
T Consensus       157 l~dfg~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~  232 (302)
T cd07864         157 LADFGLARLYNSEES--RPYTNKVITLWYRPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR  232 (302)
T ss_pred             eCcccccccccCCcc--cccccceeccCccChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            999999987643221  112234568899999987532  2467899999999999999999999987766555444433


Q ss_pred             ccCCC----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIP----------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~----------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+                            .....++..+.+++.+||..||++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            21110                            012247899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.3e-35  Score=295.60  Aligned_cols=245  Identities=20%  Similarity=0.303  Sum_probs=187.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcC----CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTED----CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed----~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      +.||+|+||.||+|.+..+...    ......|++|.+...... ...+.++.  .+++.++|+||+++++++.. ...+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~--~~l~~l~h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETA--SLMSQLSHKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHH--HHHHcCCCcchhheeeEEec-CCcE
Confidence            4699999999999998765421    112246888887654432 33333332  25667799999999999988 7789


Q ss_pred             EEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-------cEEEeccCCc
Q 007046          123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-------RAVLGDVGIP  194 (620)
Q Consensus       123 IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-------~vkL~DFGla  194 (620)
                      +||||+++ +|.+.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++       .++|+|||++
T Consensus        77 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          77 MVEEYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999995 45444443 334789999999999999999999999999999999999999887       7999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +....       .....++..|+|||++.+. ...++.++|+||||+++|+|++ |..||...+..+........   ..
T Consensus       156 ~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~---~~  224 (259)
T cd05037         156 ITVLS-------REERVERIPWIAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ---HR  224 (259)
T ss_pred             ccccc-------ccccccCCCccChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC---CC
Confidence            76532       2234577889999998643 1357889999999999999999 68888776544443333221   12


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      .+.....++.+++.+||..+|++||++.++++.|
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         225 LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            2333348999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.1e-35  Score=299.93  Aligned_cols=248  Identities=26%  Similarity=0.392  Sum_probs=198.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|.+..............+.. +++..+|+||+++++++...+.
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e~~-~l~~~~~~~i~~~~~~~~~~~~   73 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTG------KIMAVKTIRLEINEAIQKQILRELD-ILHKCNSPYIVGFYGAFYNNGD   73 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCC------cEEEEEEEecccChHHHHHHHHHHH-HHHHCCCCchhhhheeeecCCE
Confidence            46888999999999999999986555      4799999977654332222222222 4455679999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +|++|||++ ++|.+++.. ....+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus        74 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          74 ISICMEYMDGGSLDKILKE-VQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             EEEEEEecCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            999999999 566666553 33788999999999999999999999 999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhccCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-----~~~ei~~~i~~~~~~~~  273 (620)
                      ..     ......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...     ...+..+.+... ..+.
T Consensus       153 ~~-----~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~  223 (265)
T cd06605         153 NS-----LAKTFVGTSSYMAPERIQGN---DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPR  223 (265)
T ss_pred             HH-----HhhcccCChhccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCC
Confidence            21     11126789999999998654   6888999999999999999999999754     233344444322 3344


Q ss_pred             CCCC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSG-LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~-~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+.. ++.++.++|.+||..||++||++.+++.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            4444 8999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.3e-35  Score=307.26  Aligned_cols=249  Identities=21%  Similarity=0.322  Sum_probs=198.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ..|+...+||+|+||.||+|.+..++      +.||+|++..........+..+.  ..+..++|+||+++++++..++.
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~--~~l~~l~hp~i~~~~~~~~~~~~   92 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSG------RQVAVKMMDLRKQQRRELLFNEV--VIMRDYQHQNVVEMYKSYLVGEE   92 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCC------CEEEEEEEEecccchHHHHHHHH--HHHHhCCCCchhhhhhheeeCCe
Confidence            34555668999999999999876554      47999999654433333333222  34566789999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|++|||++|..+..+.  ....+++..++.++.|++.||+|||+.+++||||||+||+++.++.++|+|||+++.....
T Consensus        93 ~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~  170 (297)
T cd06659          93 LWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD  170 (297)
T ss_pred             EEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence            99999999964444443  3457899999999999999999999999999999999999999999999999998765321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLP  279 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~s  279 (620)
                         ........|++.|+|||++.+.   .++.++|+|||||++|||++|+.||......+....+..... ....+..++
T Consensus       171 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
T cd06659         171 ---VPKRKSLVGTPYWMAPEVISRT---PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKIS  244 (297)
T ss_pred             ---cccccceecCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCC
Confidence               1122345789999999998643   578899999999999999999999988777666655533221 122345678


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.++|.+||+.+|.+||++.++++
T Consensus       245 ~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         245 PVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=8.8e-35  Score=297.08  Aligned_cols=253  Identities=25%  Similarity=0.364  Sum_probs=197.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh------HHHH---HHHHHHHHHHHccCCCceeEeE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED------RMRV---LLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~------~~~~---~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      +|.+.+.||+|+||.||+|.+..++      +.||+|.++.....      ....   .+..+. .+++.++|+||++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~   74 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTG------EMMAVKQVELPATIAGRHDSRQKDMVKALRSEI-ETLKDLDHLNIVQYL   74 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCC------ceeeeeeeechhhhhcccchHHHHHHHHHHHHH-HHHHhcCCCCcceEE
Confidence            5889999999999999999876544      47999988643211      1111   111222 356777999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+..++||||++| +|.+.+.  ..+.+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+||
T Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~  152 (272)
T cd06629          75 GFETTEEYLSIFLEYVPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF  152 (272)
T ss_pred             EEeccCCceEEEEecCCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeec
Confidence            999999999999999985 5666554  3367899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++...... .........|+..|+|||.+.... ..++.++|+||||+++|++++|..||......+....+......
T Consensus       153 ~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  230 (272)
T cd06629         153 GISKKSDDIY-DNDQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA  230 (272)
T ss_pred             cccccccccc-cccccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence            9987653211 111223456899999999986432 24788999999999999999999999766655444443333333


Q ss_pred             CCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIP----SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++    ..++.++.+++.+||.++|++||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            3333    356899999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.1e-34  Score=291.58  Aligned_cols=249  Identities=25%  Similarity=0.457  Sum_probs=206.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||++.+..++      ..||+|++......  .......+.  ..++.++|+|++++++.+...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~~~~~~~~~~~~~   72 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDG------KLYVLKEIDLSNMSEKEREDALNEV--KILKKLNHPNIIKYYESFEEKG   72 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCC------cEEEEEEeecccCChHHHHHHHHHH--HHHHhcCCCChhheEEEEecCC
Confidence            5899999999999999999986544      47999999765432  222222222  2556678999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..++||||++| +|.+.+....  ...+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++..
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~  152 (258)
T cd08215          73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKV  152 (258)
T ss_pred             EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceee
Confidence            99999999995 6766665432  47899999999999999999999999999999999999999999999999999877


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      .....   .......|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..++...+... ..+.++.
T Consensus       153 ~~~~~---~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~  225 (258)
T cd08215         153 LSSTV---DLAKTVVGTPYYLSPELCQNK---PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG-QYPPIPS  225 (258)
T ss_pred             cccCc---ceecceeeeecccChhHhccC---CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC-CCCCCCC
Confidence            64321   122345789999999998643   5788999999999999999999999888877777766543 3556777


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.++.+++.+||..+|++||++.++++
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            89999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.9e-36  Score=324.10  Aligned_cols=250  Identities=22%  Similarity=0.299  Sum_probs=216.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      -..|.+...||+|.|++|.+|++..++      .+||||.+++...+.........+..+++.++|||||+++.+.....
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~------~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTG------TEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA  128 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCC------ceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence            456999999999999999999987775      47999999887665443222222223677889999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|+||||+. |.+.+++.  ++++..+.++..++.|+..|++|||+++|+|||||++||||+.+.++||+|||++..+.
T Consensus       129 ~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             eeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec
Confidence            9999999998 67888876  56788889999999999999999999999999999999999999999999999998885


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                          ......++||++.|.|||.+.+..  ...+.+|+||+|+++|.|+.|.+||.+.+..++...++.+..  .+|..+
T Consensus       207 ----~~~~lqt~cgsppyAaPEl~~g~~--y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~--rIp~~m  278 (596)
T KOG0586|consen  207 ----YGLMLQTFCGSPPYAAPELFNGKK--YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY--RIPFYM  278 (596)
T ss_pred             ----ccccccccCCCCCccChHhhcCcc--cCCcceehhhhhhhheeeeecccccCCcccccccchheeeee--ccccee
Confidence                344567789999999999998763  345789999999999999999999999998888777765544  467778


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.+++++|+++|-.+|.+|+++++|.+
T Consensus       279 s~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  279 SCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             echhHHHHHHhhccCccccCCHHHhhh
Confidence            999999999999999999999999987

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=6.1e-35  Score=296.97  Aligned_cols=251  Identities=23%  Similarity=0.373  Sum_probs=197.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---H---HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---R---MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      +|+..+.||+|+||.||+|.+..++      ..||+|++......   .   ...+..+ . ..++.++|+||+++++++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~------~~~alk~~~~~~~~~~~~~~~~~~~~~e-~-~~l~~l~h~~iv~~~~~~   72 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTG------TLMAVKQVTYVRNTSSEQEEVVEALRKE-I-RLMARLNHPHIIRMLGAT   72 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCC------cEEEEEEeecccCCchhHHHHHHHHHHH-H-HHHHHcCCCceehhhcee
Confidence            4888899999999999999876554      47999999754321   1   1122222 2 356667999999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCC
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGI  193 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGl  193 (620)
                      ...+.+++||||++| +|.+.+.  ...++++..+..++.||+.||.|||++|++|+||||+||+++.++ .++|+|||+
T Consensus        73 ~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~  150 (268)
T cd06630          73 CEDSHFNLFVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGA  150 (268)
T ss_pred             ccCCeEEEEEeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccc
Confidence            999999999999995 5555554  346789999999999999999999999999999999999998776 599999999


Q ss_pred             cccccCCCCCC-CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcc
Q 007046          194 PHLLLGIPLPS-SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQ  269 (620)
Q Consensus       194 a~~~~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---ei~~~i~~~~  269 (620)
                      +.......... .......||..|+|||.+.+.   .++.++|+||||+++|+|++|..||......   .....+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  227 (268)
T cd06630         151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE---QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT  227 (268)
T ss_pred             ccccccccccCCccccccccccceeCHhHhccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC
Confidence            88764321111 112234689999999998643   5788999999999999999999999754432   2232333334


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+..+..+++++.+++.+||..+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            456677889999999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=6.4e-35  Score=301.48  Aligned_cols=264  Identities=19%  Similarity=0.294  Sum_probs=200.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.+.||+|+||.||+|.+....   ..+..||+|++.......   .......+..++....+|+||+.+++.+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~---~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGH---DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD   77 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCC---CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC
Confidence            4899999999999999999875322   245689999997543211   1122222333444455799999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ..+|+||||++ ++|.+.+.  ....+++..+..++.||+.||.|||+.+++||||+|+|||++.++.++|+|||+++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          78 TKLHLILDYINGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             CeEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            99999999999 56666665  3457899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhccCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPP  273 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~----~~ei~~~i~~~~~~~~  273 (620)
                      ....  ........|+..|+|||.+... ...++.++|+||||+++|+|++|..||....    ..++...+..  ..++
T Consensus       156 ~~~~--~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~  230 (290)
T cd05613         156 HEDE--VERAYSFCGTIEYMAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPP  230 (290)
T ss_pred             cccc--ccccccccCCcccCChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCC
Confidence            3221  1122345789999999998643 2346778999999999999999999996432    2333333322  2344


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTG  315 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~  315 (620)
                      ++..+++.+.+++.+||..||++||     ++.+++. .+.....|..
T Consensus       231 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~  278 (290)
T cd05613         231 YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDD  278 (290)
T ss_pred             CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence            6778999999999999999999997     7788876 3333344433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-35  Score=298.27  Aligned_cols=250  Identities=18%  Similarity=0.228  Sum_probs=197.1

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHH--HHccCCCceeEeEEEEEECC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLF--LKCQGVEGICWLQGISVING  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~--l~~~~h~nIv~l~g~~~~~~  119 (620)
                      |++.+.||+|+||.||+|++..++      +.||+|+++...... .......+...+  +...+|+||+++++++...+
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   74 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTG------RFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR   74 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCC------CEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence            688999999999999999986544      489999997543221 111111121122  23347999999999998877


Q ss_pred             E-----EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          120 K-----ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       120 ~-----~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .     ++++|||+++++.+.+.......+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus        75 ~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~  154 (287)
T cd07838          75 TDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA  154 (287)
T ss_pred             CCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence            6     99999999998888876544457999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--  272 (620)
                      ..+...    .......+++.|+|||.+.+.   .++.++|+|||||++|+|++|.+||.+....+.+..+......+  
T Consensus       155 ~~~~~~----~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07838         155 RIYSFE----MALTSVVVTLWYRAPEVLLQS---SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSE  227 (287)
T ss_pred             eeccCC----cccccccccccccChHHhccC---CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCCh
Confidence            776322    122334578999999998643   57889999999999999999999999888776666554321110  


Q ss_pred             -----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 -----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 -----------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                             .....+++.+.++|.+||+.||++||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                                   001235678899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.3e-34  Score=295.71  Aligned_cols=257  Identities=21%  Similarity=0.325  Sum_probs=199.1

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      |++.+.||+|+||.||+|.+....   ..++.||||++......  ....+..+.  ..++.++|+||+++++++.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSED---GSFQKVAVKMLKADIFSSSDIEEFLREA--ACMKEFDHPNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccC---CCceEEEEEEeccccCChHHHHHHHHHH--HHHhcCCCCCcceEEEEEccCCC
Confidence            567889999999999999875432   23468999999764322  222333322  3566779999999999886532 


Q ss_pred             -----EEEEEEecCC-CChHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          120 -----KICIIMKFYE-GSVGDRMAQLK----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       120 -----~~~IVmE~~~-GsLld~l~~~~----~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                           ..++++||+. |++.+.+....    ...+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~  155 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA  155 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEEC
Confidence                 2478999998 55555543211    1357889999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~  268 (620)
                      |||+++....... ........+++.|++||.+...   .++.++|+||||+++|+|++ |.+||.+.+..++...+...
T Consensus       156 dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~---~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05074         156 DFGLSKKIYSGDY-YRQGCASKLPVKWLALESLADN---VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG  231 (273)
T ss_pred             cccccccccCCcc-eecCCCccCchhhcCHhHHhcC---ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999886532211 1111233466789999998643   57889999999999999999 99999988887777766544


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      . ....+..++..+.+++.+||..+|++||++.++++.|+.
T Consensus       232 ~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         232 N-RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             C-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            3 334456788999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.9e-34  Score=291.95  Aligned_cols=249  Identities=24%  Similarity=0.406  Sum_probs=202.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||+|++..............+. ..+..++|+||+++++++...+.
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~------~~~~vk~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~   73 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTG------KIYALKKIHVDGDEEFRKQLLREL-KTLRSCESPYVVKCYGAFYKEGE   73 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCC------cEEEEEEeccCcchHHHHHHHHHH-HHHHhcCCCCeeeEEEEEccCCe
Confidence            47899999999999999999987655      479999997665422222222222 23455679999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .++||||++ ++|.+.+..  ...+++..++.++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++....
T Consensus        74 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~  151 (264)
T cd06623          74 ISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE  151 (264)
T ss_pred             EEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999999999 566666653  3779999999999999999999999 999999999999999999999999999988764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHhccCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---~~~ei~~~i~~~~~~~~~p  275 (620)
                      ...   .......++..|+|||.+...   .++.++|+||||+++|+|++|..||...   ...+....+. ....+..+
T Consensus       152 ~~~---~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~  224 (264)
T cd06623         152 NTL---DQCNTFVGTVTYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLP  224 (264)
T ss_pred             cCC---CcccceeecccccCHhhhCCC---CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCC
Confidence            321   112245689999999998643   6788999999999999999999999876   4445555554 33344556


Q ss_pred             CC-CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SG-LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~-~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .. ++..+.++|.+||..+|++||++.++++
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            66 8999999999999999999999999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=2.2e-34  Score=287.73  Aligned_cols=247  Identities=24%  Similarity=0.412  Sum_probs=200.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      +|.+.+.||+|+||.||++.+..++      ..+++|+++.........+..+..  .++.++|+||+++++++..+...
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~e~~--~l~~l~~~~i~~~~~~~~~~~~~   72 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTG------KEVAIKVIKLESKEKKEKIINEIQ--ILKKCKHPNIVKYYGSYLKKDEL   72 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCC------cEEEEEEecccchhHHHHHHHHHH--HHHhCCCCCEeEEEEEEecCCeE
Confidence            4889999999999999999986544      479999998765533343444332  45667799999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +++|||++ ++|.+.+.. ....+++..+..++.|++.+|.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus        73 ~l~~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          73 WIVMEFCSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             EEEEecCCCCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            99999999 455555543 3367899999999999999999999999999999999999999999999999998776432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC--C
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--L  278 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~--~  278 (620)
                      ..    .....|+..|++||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+.. ...+..+..  +
T Consensus       152 ~~----~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  223 (253)
T cd05122         152 KA----RNTMVGTPYWMAPEVINGK---PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKW  223 (253)
T ss_pred             cc----ccceecCCcccCHHHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCccccc
Confidence            11    3445789999999998644   478899999999999999999999988765555444433 223333333  3


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+.++|.+||..||++||++.++++
T Consensus       224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         224 SDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            899999999999999999999999986

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-35  Score=298.95  Aligned_cols=251  Identities=21%  Similarity=0.297  Sum_probs=196.1

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      |++.+.||+|+||.||+|+...++      +.||||.+.............++...+.+..+|+||+++++++..++..|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   74 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETG------ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELY   74 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCC------cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEE
Confidence            678899999999999999976554      47999998754332212112222223334434999999999999999999


Q ss_pred             EEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       123 IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      +||||+.|++.+.+.......+++..++.++.|++.+|.|||+++++|+||+|+||+++.++.++|+|||+++.....  
T Consensus        75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--  152 (283)
T cd07830          75 FVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--  152 (283)
T ss_pred             EEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--
Confidence            999999999988887544467899999999999999999999999999999999999999999999999998866321  


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC----------
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP----------  272 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~----------  272 (620)
                        .......++..|+|||++...  ..++.++|+||||+++++|++|.+||......+.+..+......+          
T Consensus       153 --~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (283)
T cd07830         153 --PPYTDYVSTRWYRAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK  228 (283)
T ss_pred             --CCcCCCCCcccccCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence              122345689999999987532  347889999999999999999999998776555443332211100          


Q ss_pred             ------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                        ......+.++.++|++||+.||++||+++|++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                              011223688999999999999999999999986

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=6.1e-35  Score=303.41  Aligned_cols=255  Identities=22%  Similarity=0.307  Sum_probs=197.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.++||+|+||.||+|++..++      +.||||.+.......  ......+.  ..++.++|+||+++++++..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~   78 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTG------RVVALKKILMHNEKDGFPITALREI--KILKKLKHPNVVPLIDMAVE   78 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCC------cEEEEEEEEeccCCCCcchhHHHHH--HHHHhcCCCCccchhhheec
Confidence            588999999999999999999976655      479999986543211  11222222  25566799999999988754


Q ss_pred             C--------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          118 N--------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       118 ~--------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      .        ..+|+||||+.+++.+.+.. ....+++..+..++.||++||.|||+++|+|+||||+||++++++.++|+
T Consensus        79 ~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~  157 (311)
T cd07866          79 RPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIA  157 (311)
T ss_pred             ccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEC
Confidence            3        34799999999988877754 34579999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCC--------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 007046          190 DVGIPHLLLGIPLPS--------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI  261 (620)
Q Consensus       190 DFGla~~~~~~~~~~--------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei  261 (620)
                      |||+++.........        .......||+.|+|||.+.+.  ..++.++|+||||+++|||++|++||.+.+....
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~  235 (311)
T cd07866         158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ  235 (311)
T ss_pred             cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999998664322111        112334678999999987532  2478899999999999999999999998777665


Q ss_pred             HHHHHhccCCC---------------------CCC-------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          262 YDAVVRRQEIP---------------------PIP-------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       262 ~~~i~~~~~~~---------------------~~p-------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+......+                     ..+       ..+++++.++|.+||+.||++||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            55543321110                     000       234578899999999999999999999886

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-37  Score=354.21  Aligned_cols=255  Identities=26%  Similarity=0.354  Sum_probs=205.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH-HHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-VLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~-~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +|+....||.|.||.||-|.+..+++      ..|+|-++-....... ....++ ..++..++|||+|+++|+-.+.+.
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGe------llAvKEI~iq~~~~k~~~~i~eE-m~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGE------LLAVKEIKIQDSDHKTFKLIAEE-MKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccc------hhhhhhhhcCccccccCcchHHH-HHHHHhccCccccccCceeecHHH
Confidence            57778899999999999999766664      7899988654333111 111121 135667899999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+|.||||. |+|.+++.  .++..++.....|..|++.|++|||+.||+||||||+||+|+.+|.+|++|||.|..+..
T Consensus      1309 v~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecC
Confidence            999999999 56666665  345567777778899999999999999999999999999999999999999999988865


Q ss_pred             CCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCCCCCC
Q 007046          200 IPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       200 ~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~~~~~p~~  277 (620)
                      ... -........|||.|||||++.+........+.|||||||++.||+||+.||...+. .+++-.+. ....|.+|..
T Consensus      1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ 1465 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPER 1465 (1509)
T ss_pred             chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchh
Confidence            311 11122345899999999999876544556689999999999999999999987654 45665554 4467889999


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      ++++-+++|.+||+.||+.|.++.+|++.
T Consensus      1466 ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1466 LSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            99999999999999999999999999984

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=296.17  Aligned_cols=250  Identities=22%  Similarity=0.291  Sum_probs=198.4

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc--hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--  118 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--  118 (620)
                      |++.++||+|+||.||+|.+..++      +.||+|.++...  ......+..+.  .+++..+|+|++++++++...  
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~~   72 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTG------ELVALKKIRMENEKEGFPITAIREI--KLLQKLRHPNIVRLKEIVTSKGK   72 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCC------eEEEEEEEecccccccchHHHHHHH--HHHHhccCCCeeeheeeEecCCC
Confidence            678999999999999999976654      479999998654  11122222222  255667899999999999887  


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||+++++.+.+.. ....+++..++.++.||+.||+|||+.+++|+||||+||++++++.++|+|||++....
T Consensus        73 ~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~  151 (287)
T cd07840          73 GSIYMVFEYMDHDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYT  151 (287)
T ss_pred             CcEEEEeccccccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence            89999999999988877764 33578999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-----  273 (620)
                      ...  ........++..|+|||.+.+.  ..++.++|+||||+++|||++|+.||...+....+..+......+.     
T Consensus       152 ~~~--~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         152 KRN--SADYTNRVITLWYRPPELLLGA--TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             CCC--cccccccccccccCCceeeEcc--ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            321  1122344678899999987542  2478899999999999999999999988877665555443211110     


Q ss_pred             ------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              +...+++++.+++.+||..+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                                    01113889999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.7e-34  Score=298.60  Aligned_cols=246  Identities=21%  Similarity=0.337  Sum_probs=198.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      +|.-.+.||+|+||.||+|.+..++      +.||+|.++.........+.++.  .+++..+|+||+++++++...+..
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~e~--~~l~~~~h~~vv~~~~~~~~~~~~   91 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTG------RQVAVKKMDLRKQQRRELLFNEV--VIMRDYQHPNIVEMYSSYLVGDEL   91 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCC------CEEEEEEEeccchhHHHHHHHHH--HHHHHcCCCChheEEEEEEcCCeE
Confidence            4566689999999999999876554      47999998654443333333332  356667999999999999999999


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |++|||++| +|.+.+.   ..++++..+..++.||+.||+|||+++++||||+|+||+++.++.++|+|||++......
T Consensus        92 ~~v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~  168 (285)
T cd06648          92 WVVMEFLEGGALTDIVT---HTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE  168 (285)
T ss_pred             EEEEeccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence            999999985 5555543   267899999999999999999999999999999999999999999999999988765321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC--CCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--PSGL  278 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~--p~~~  278 (620)
                         ........|++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+.... .+..  +..+
T Consensus       169 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  241 (285)
T cd06648         169 ---VPRRKSLVGTPYWMAPEVISRL---PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKLKNLHKV  241 (285)
T ss_pred             ---CcccccccCCccccCHHHhcCC---CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCCcccccC
Confidence               1122335689999999998643   57889999999999999999999998877777666665442 2222  3348


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+.+++.+||..+|++||++.++++
T Consensus       242 ~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         242 SPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            899999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.3e-35  Score=309.33  Aligned_cols=251  Identities=18%  Similarity=0.238  Sum_probs=196.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||.++.....  .......+.  ..++..+|+||+++++++..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~ni~~~~~~~~~   75 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETN------EKVAIKKIANAFDNRIDAKRTLREI--KLLRHLDHENVIAIKDIMPP   75 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCC------CeEEEEEecccccccchhHHHHHHH--HHHHhcCCCCccchHHheec
Confidence            357999999999999999999976655      48999998754221  122222222  35566789999999998765


Q ss_pred             C-----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          118 N-----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       118 ~-----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      .     ...|+||||+.+++.+.+.  ..+.+++..+..++.||+.||.|||+++++||||||+||+++.++.+||+|||
T Consensus        76 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg  153 (337)
T cd07858          76 PHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG  153 (337)
T ss_pred             ccccccCcEEEEEeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCc
Confidence            4     3489999999998888775  34679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--  270 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~--  270 (620)
                      +++.....   ........+|..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+....+..+.....  
T Consensus       154 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  228 (337)
T cd07858         154 LARTTSEK---GDFMTEYVVTRWYRAPELLLNC--SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP  228 (337)
T ss_pred             cccccCCC---cccccccccccCccChHHHhcC--CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence            99865321   1223345789999999987532  2478899999999999999999999987654333322211000  


Q ss_pred             ----------------------C-----CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 ----------------------I-----PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ----------------------~-----~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                            .     ......+++++.++|++||+.+|++||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~  290 (337)
T cd07858         229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA  290 (337)
T ss_pred             ChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence                                  0     0122468899999999999999999999999997

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=6.8e-35  Score=308.52  Aligned_cols=253  Identities=21%  Similarity=0.281  Sum_probs=197.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++......  .......+.  .+++.++|+||+++++++.. 
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~   76 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSG------KKVAIKKIPHAFDVPTLAKRTLREL--KILRHFKHDNIIAIRDILRPP   76 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCC------CEEEEEEeccccccccchHHHHHHH--HHHHhcCCCCccCHHHhcccc
Confidence            68999999999999999999987665      47999999764321  122222222  35666789999999998763 


Q ss_pred             ---CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 ---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 ---~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                         ...+|+||||+.|++.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~  154 (334)
T cd07855          77 GADFKDVYVVMDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMA  154 (334)
T ss_pred             CCCCceEEEEEehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccc
Confidence               35689999999988877765  3456999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc----
Q 007046          195 HLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ----  269 (620)
Q Consensus       195 ~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~----  269 (620)
                      +........ ........|+..|+|||.+.+.  ..++.++|+||||+++|||++|+.||.+.+....+..+....    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~  232 (334)
T cd07855         155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS  232 (334)
T ss_pred             eeecccCcCCCcccccccccccccChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence            776432211 1222345789999999997532  247889999999999999999999998766543332222110    


Q ss_pred             --------------------CCCCC-----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 --------------------EIPPI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 --------------------~~~~~-----p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          .....     ....+.++.++|++||+.+|++||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                                01111     1457899999999999999999999999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.3e-34  Score=296.72  Aligned_cols=240  Identities=20%  Similarity=0.301  Sum_probs=189.1

Q ss_pred             CeeEEeee--eccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRI--GRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~I--G~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.+  |+|+||.||++.++.++      ..+|+|.+.........    ..  ......+|+||+++++.+..++
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~e----~~--~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQ------KLFVQKIIKAKNFNAIE----PM--VHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCC------cEEEEEEEehhhcchhh----HH--HHHHhhcCCCEEEEEEEEecCC
Confidence            45666665  99999999999977665      47999998754322111    11  1111237999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCcccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~~~  197 (620)
                      ..|+||||++ |+|.+++..  ...+++..+..++.||+.||.|||+.+++||||||+||+++.++ .++|+|||+++..
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII  160 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence            9999999998 577666653  34899999999999999999999999999999999999999998 9999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-hccCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVV-RRQEIPPIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei-~~~i~-~~~~~~~~p  275 (620)
                      ..       .....||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.......+ ...+. ........+
T Consensus       161 ~~-------~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  230 (267)
T PHA03390        161 GT-------PSCYDGTLDYFSPEKIKGH---NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFI  230 (267)
T ss_pred             CC-------CccCCCCCcccChhhhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcc
Confidence            32       1234689999999998643   678899999999999999999999986543322 11111 112333456


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCC-HHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPL-MTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs-~~eil~  305 (620)
                      ..+++.+.++|.+||+.+|.+||+ ++++++
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            689999999999999999999995 699986

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=7.4e-35  Score=294.40  Aligned_cols=244  Identities=22%  Similarity=0.318  Sum_probs=193.6

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ||+|+||.||+|++..++      +.||+|++.......   ...+..+.  .+++..+|+||+++++.+..+...|++|
T Consensus         1 lg~g~~~~vy~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~--~~l~~~~h~~i~~~~~~~~~~~~~~lv~   72 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTG------DIYAIKVIKKADMIRKNQVDQVLTER--DILSQAQSPYVVKLYYSFQGKKNLYLVM   72 (265)
T ss_pred             CCCCCceEEEEEEECCCC------CEEEEEEecchhhhhhhHHHHHHHHH--HHHHhCCCcchhHHHHheecCcEEEEEE
Confidence            689999999999976554      479999997654321   12222222  2556678999999999999999999999


Q ss_pred             ecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC-
Q 007046          126 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-  203 (620)
Q Consensus       126 E~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~-  203 (620)
                      ||++| +|.+.+..  .+.+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        73 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  150 (265)
T cd05579          73 EYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN  150 (265)
T ss_pred             ecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc
Confidence            99985 66666653  347899999999999999999999999999999999999999999999999998765322110 


Q ss_pred             ----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          204 ----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       204 ----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                          ........++..|++||.+...   ..+.++|+||||+++|++++|..||......+....+.......+....++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (265)
T cd05579         151 LNDDEKEDKRIVGTPDYIAPEVILGQ---GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVS  227 (265)
T ss_pred             cccccccccCcccCccccCHHHhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCC
Confidence                1122345688999999998643   478899999999999999999999998888888877765333322222349


Q ss_pred             HHHHHHHHHhhhcCcCCCCCH---HHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLM---TDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~---~eil~  305 (620)
                      .++.+++.+||+.+|++||++   .++++
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         228 DEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            999999999999999999999   66665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=4.3e-35  Score=297.06  Aligned_cols=245  Identities=23%  Similarity=0.269  Sum_probs=197.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.+.||.|+||.||+|.+..++      ..||+|++......   ....+..+.  ..++.++||||+++++++..+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~   72 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTK------KMFAMKYMNKQKCVEKGSVRNVLNER--RILQELNHPFLVNLWYSFQDE   72 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCC------cEEEEEEEehhhhcchhHHHHHHHHH--HHHHhCCCCChHHHHHhhcCC
Confidence            5899999999999999999976554      47999999754322   222222222  256677999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ...|+||||+.| +|.+.+..  ..++++..+..++.||++||.|||+++++|+||+|+||++++++.++|+|||++...
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~  150 (258)
T cd05578          73 ENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKV  150 (258)
T ss_pred             CeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeeccccccc
Confidence            999999999986 55555542  368999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhccCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPPI  274 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~---~ei~~~i~~~~~~~~~  274 (620)
                      ...    .......|+..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.   .++......  ..+..
T Consensus       151 ~~~----~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~  221 (258)
T cd05578         151 TPD----TLTTSTSGTPGYMAPEVLCRQ---GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLY  221 (258)
T ss_pred             CCC----ccccccCCChhhcCHHHHccc---CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccC
Confidence            321    122345689999999998644   478899999999999999999999987763   333333221  44567


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCH--HHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLM--TDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~--~eil~  305 (620)
                      +..++.++.++|.+||..||.+||++  +|+++
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         222 PATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             cccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            78899999999999999999999999  77664

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-35  Score=315.60  Aligned_cols=282  Identities=20%  Similarity=0.182  Sum_probs=218.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .++.+-|..++.||-|+||+|.++....|.      ..||+|.|++...-. .+...-+.+.-++.-.+.+-||+|+..|
T Consensus       625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~------~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF  698 (1034)
T KOG0608|consen  625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTR------ALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF  698 (1034)
T ss_pred             hccccceEEEeeecccccceeEEEeecchh------hHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe
Confidence            478889999999999999999999866554      589999998754322 2222222333466777889999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .+.+.+|+||+|++ |++-.++.  +-+-|++..+.+|+.++..|+++.|..|+|||||||+|||||.+|+|||.|||||
T Consensus       699 QDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  699 QDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             ccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccc
Confidence            99999999999999 56666665  4578999999999999999999999999999999999999999999999999999


Q ss_pred             ccccC---------CC---CCCC---------------------------CCCCcCCCCCCCCcccccCCCCCCCCchhh
Q 007046          195 HLLLG---------IP---LPSS---------------------------DLPRRLGTPNYMAPEQWQPEVRGPISFETD  235 (620)
Q Consensus       195 ~~~~~---------~~---~~~~---------------------------~~~~~~GT~~YmAPE~~~~~~~~~~s~~sD  235 (620)
                      +-+--         .+   ....                           .....+||+.|+|||++.   +..|+..||
T Consensus       777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~---r~g~~q~cd  853 (1034)
T KOG0608|consen  777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA---RTGYTQLCD  853 (1034)
T ss_pred             ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc---ccCccccch
Confidence            75420         00   0000                           001236999999999996   446899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--CCCCCCCHHHHHHHHHhhhcCcCCCCC---HHHHHH-HHHh
Q 007046          236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDLRSRPL---MTDILR-VFKS  309 (620)
Q Consensus       236 VwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs---~~eil~-~L~~  309 (620)
                      +||.|||||||+.|++||...++.+...++..-+...  ....++++++.++|.+++. +++.|..   .+++.. .|++
T Consensus       854 wws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFk  932 (1034)
T KOG0608|consen  854 WWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFK  932 (1034)
T ss_pred             hhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccc
Confidence            9999999999999999999887766655554333223  3346899999999988774 6888984   445655 7888


Q ss_pred             CCCCCCCCCccCCCCCCCCcccc
Q 007046          310 DGGWTGHGSRILPDKSSSGYTEW  332 (620)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~  332 (620)
                      ++||..  -+.+..+..+.....
T Consensus       933 gIDfss--lRkq~ApYIP~ItHp  953 (1034)
T KOG0608|consen  933 GIDFSS--LRKQRAPYIPRITHP  953 (1034)
T ss_pred             ccchHh--hhhccCCcCccccCC
Confidence            899987  344555666655444

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1e-34  Score=299.68  Aligned_cols=274  Identities=20%  Similarity=0.285  Sum_probs=203.8

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.+.||+|+||.||+|++....   ..+..||||+++......   .......+..++....+|+||+++++.+..+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~   77 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGH---DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD   77 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccc---cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC
Confidence            4889999999999999999865432   234689999997543211   1112222333444555899999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ...|+||||++| +|.+.+.  ....+++..+..++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||+++.+
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          78 TKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             CEEEEEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            999999999985 6666554  3457899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhccCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPP  273 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~----~~ei~~~i~~~~~~~~  273 (620)
                      ....  ........|++.|+|||.+.+.. ...+.++|+||||+++|+|++|..||....    ..++.+.+..  ..+.
T Consensus       156 ~~~~--~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~  230 (288)
T cd05583         156 LAEE--EERAYSFCGTIEYMAPEVIRGGS-GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPP  230 (288)
T ss_pred             cccc--ccccccccCCccccCHHHhcCCC-CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCC
Confidence            4321  11122356899999999986432 236789999999999999999999996432    2333333322  2345


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH----HhCCCCCCCCCccCCCCC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF----KSDGGWTGHGSRILPDKS  325 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L----~~~~~~~~~~~~~~~~~~  325 (620)
                      .+..++.++.+++.+||+.||++||++.++.+.|    .+..+|....+...++++
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  286 (288)
T cd05583         231 FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAKRIPAPF  286 (288)
T ss_pred             CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHHhhhccCCCC
Confidence            6778999999999999999999999976665433    334455444444444443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.1e-36  Score=325.01  Aligned_cols=247  Identities=23%  Similarity=0.352  Sum_probs=204.3

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH----HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM----RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~----~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .+....||+|+|-+||+|.+..      .|.+||.-.++.....+.    +.+..+.  .+++.++|+||++++.++.+.
T Consensus        42 ~k~~evLGrGafKtVYka~De~------~giEVAWnqvk~~d~~q~~~~leR~~~Ev--~lLKsL~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEE------EGIEVAWNQVKIRDVTQSPEELERLYSEV--HLLKSLKHPNIIRFYDSWVDT  113 (632)
T ss_pred             eehhhhcccccceeeeeccccc------cchhhHHHHHhHHHhhcChHHHHHHHHHH--HHHccCCCCceeeeeeheecC
Confidence            5677899999999999998643      445788776654332222    2222222  378889999999999999875


Q ss_pred             CE--EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeecccCCcEEEccC-CcEEEeccC
Q 007046          119 GK--ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--GILVLNLKPFNFILNEA-DRAVLGDVG  192 (620)
Q Consensus       119 ~~--~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~--gIiHrDLKP~NILld~~-~~vkL~DFG  192 (620)
                      ..  +-+|+|++. |+|..++.  +.+.++...+..|++||+.||.|||++  .|||||||.+||+|+.+ |.|||+|+|
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLG  191 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG  191 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchh
Confidence            54  889999999 77777776  457789999999999999999999998  49999999999999876 899999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~-~~~~ei~~~i~~~~~~  271 (620)
                      ||+...     .......+|||.|||||+...    .|+..+||||||++++||+|+..||.. .++.++|+++..+..+
T Consensus       192 LAtl~r-----~s~aksvIGTPEFMAPEmYEE----~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP  262 (632)
T KOG0584|consen  192 LATLLR-----KSHAKSVIGTPEFMAPEMYEE----NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP  262 (632)
T ss_pred             HHHHhh-----ccccceeccCccccChHHHhh----hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH
Confidence            999873     234445799999999999863    599999999999999999999999975 6788999999988776


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~  309 (620)
                      ..+..--.+++++||.+||.. .++||++.|+|+ .|..
T Consensus       263 ~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~  300 (632)
T KOG0584|consen  263 AALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFD  300 (632)
T ss_pred             HHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence            666666789999999999998 999999999998 4444

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-38  Score=310.83  Aligned_cols=248  Identities=20%  Similarity=0.289  Sum_probs=204.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +-|.++++||+|+||.||+|.++.++      +.+|||.+..+.  ..++...+. .++.+ -+.++||+++|.+..+..
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG------~v~AIK~VPV~s--DLQEIIKEI-SIMQQ-C~S~yVVKYYGSYFK~sD  102 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESG------HVLAIKKVPVDT--DLQEIIKEI-SIMQQ-CKSKYVVKYYGSYFKHSD  102 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccC------cEEEEEecCccc--hHHHHHHHH-HHHHH-cCCchhhhhhhhhccCCc
Confidence            44889999999999999999987665      589999986544  233344433 23444 477999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|||||||. |+.-|.+ +.+..+|++.++..+++..+.||+|||...-||||||..|||++.+|++||+|||.|..+.+
T Consensus       103 LWIVMEYCGAGSiSDI~-R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD  181 (502)
T KOG0574|consen  103 LWIVMEYCGAGSISDIM-RARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD  181 (502)
T ss_pred             eEeehhhcCCCcHHHHH-HHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence            999999999 6665554 56889999999999999999999999999999999999999999999999999999988754


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~~  278 (620)
                      .   -....+..|||.|||||++...   .|+.++||||||++..||..|++||.+..+....-.|-... .....|...
T Consensus       182 T---MAKRNTVIGTPFWMAPEVI~EI---GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~W  255 (502)
T KOG0574|consen  182 T---MAKRNTVIGTPFWMAPEVIEEI---GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEW  255 (502)
T ss_pred             h---HHhhCccccCcccccHHHHHHh---ccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhh
Confidence            2   2233467899999999999744   68999999999999999999999999887765444332211 111245678


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++-+++++||-++|++|-++.++++
T Consensus       256 S~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  256 SSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             hhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            999999999999999999999999887

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.3e-34  Score=300.86  Aligned_cols=249  Identities=20%  Similarity=0.304  Sum_probs=198.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||++.+..++      +.||+|.+..........+..+.  .+++..+|+||+++++++...+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~--~~l~~l~hp~i~~~~~~~~~~~   89 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATG------QEVAIKQMNLQQQPKKELIINEI--LVMRENKHPNIVNYLDSYLVGD   89 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCC------CEEEEEEeccccchHHHHHHHHH--HHHhhcCCCCeeehhheeeeCC
Confidence            378999999999999999999865544      47999998654433333333332  2456678999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++| ++.+.+.   ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++....
T Consensus        90 ~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~  166 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             cEEEEEecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence            99999999985 5555543   3468899999999999999999999999999999999999999999999999987653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~  277 (620)
                      ..   ........|++.|+|||.+..   +.++.++|+||||+++|++++|..||...+..+....+.... .....+..
T Consensus       167 ~~---~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (293)
T cd06647         167 PE---QSKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEK  240 (293)
T ss_pred             cc---ccccccccCChhhcCchhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccc
Confidence            21   122234478999999999864   357889999999999999999999998776554433332221 11223456


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+.++|.+||..+|++||++.+++.
T Consensus       241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         241 LSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            7889999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.1e-34  Score=290.34  Aligned_cols=247  Identities=26%  Similarity=0.444  Sum_probs=203.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.++||+|+||.||++.+..++      +.+|+|.+.......  ...+..+.  ..++.++|+||+++++++....
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDN------QFYALKEVDLGSMSQKEREDAVNEI--RILASVNHPNIISYKEAFLDGN   72 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCC------CEEEEEEEehhhccHHHHHHHHHHH--HHHHhCCCCCchhhhhhhccCC
Confidence            5899999999999999999876655      479999987543222  22222222  3556678999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..|+||||++| +|.+.+...  ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||+++.
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~  152 (256)
T cd08530          73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKV  152 (256)
T ss_pred             EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhh
Confidence            99999999985 565555432  235789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ....     ......|++.|++||.+.+.   .++.++|+||||+++|+|++|+.||...+..++...+... ..+..+.
T Consensus       153 ~~~~-----~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~  223 (256)
T cd08530         153 LKKN-----MAKTQIGTPHYMAPEVWKGR---PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-KYPPIPP  223 (256)
T ss_pred             hccC-----CcccccCCccccCHHHHCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCch
Confidence            6432     22335689999999998643   5788999999999999999999999988887776666443 3445667


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.++.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            89999999999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.7e-34  Score=306.90  Aligned_cols=253  Identities=20%  Similarity=0.263  Sum_probs=195.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      ..+|++.+.||+|+||.||+|++..++      ..||+|.+............++..  +++..+|+||+++++++... 
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~------~~v~iK~i~~~~~~~~~~~~~Ei~--~l~~l~h~~i~~~~~~~~~~~   75 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCD------KRVAVKKIVLTDPQSVKHALREIK--IIRRLDHDNIVKVYEVLGPSG   75 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCC------cEEEEEEEecCCCchHHHHHHHHH--HHHhcCCCcchhhHhhhcccc
Confidence            368999999999999999999976655      489999997665544444444332  45667999999999776543 


Q ss_pred             -------------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CC
Q 007046          119 -------------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-AD  184 (620)
Q Consensus       119 -------------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~  184 (620)
                                   ...|+||||+++++.+.+.   ...+++..++.++.||+.||.|||+.||+||||||+||+++. ++
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~  152 (342)
T cd07854          76 SDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDL  152 (342)
T ss_pred             cccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCc
Confidence                         3589999999987776663   457899999999999999999999999999999999999984 56


Q ss_pred             cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA  264 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~  264 (620)
                      .++|+|||+++.+..............||..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+..+....
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~  230 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL  230 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            78999999997653221111122334688999999987532  2477899999999999999999999987765554443


Q ss_pred             HHhcc-----------------------CCC-----CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQ-----------------------EIP-----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~-----------------------~~~-----~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +....                       ..+     .....++.++.++|.+||..||.+||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            33211                       000     012357889999999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.9e-34  Score=294.37  Aligned_cols=248  Identities=24%  Similarity=0.318  Sum_probs=194.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      ++|+..++||.|+||.||+|.+..++      +.||+|.+....... ...+..+.  ..++.++|+||+++++++... 
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~~   72 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTG------MIFALKTITTDPNPDLQKQILREL--EINKSCKSPYIVKYYGAFLDES   72 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCC------eEEEEEEEecCCchHHHHHHHHHH--HHHHhCCCCCeeeeeeEEEccC
Confidence            47999999999999999999986544      589999997654322 23333333  255667999999999988653 


Q ss_pred             -CEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 -GKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 -~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                       +.+|+||||++ ++|.+.+...  ....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus        73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  152 (287)
T cd06621          73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS  152 (287)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccc
Confidence             47899999998 4666665432  3466899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcc
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQ  269 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-----~~~ei~~~i~~~~  269 (620)
                      .....     .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...     ...+....+... 
T Consensus       153 ~~~~~-----~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-  223 (287)
T cd06621         153 GELVN-----SLAGTFTGTSFYMAPERIQGK---PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-  223 (287)
T ss_pred             ccccc-----cccccccCCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-
Confidence            76532     112234678899999998643   6788999999999999999999999765     233444444321 


Q ss_pred             CCCCCC------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIP------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+.++      ...++++.++|.+||..||++||++.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         224 PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            112222      235678999999999999999999999997

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2.6e-34  Score=303.77  Aligned_cols=253  Identities=19%  Similarity=0.232  Sum_probs=198.4

Q ss_pred             CCee-EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--------------HHHHHHHHHHHHccCC
Q 007046           41 SALK-LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--------------VLLERLNDLFLKCQGV  105 (620)
Q Consensus        41 ~~y~-i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--------------~~~~~~~~~~l~~~~h  105 (620)
                      ++|. +.+.||+|+||.||+|.+..++      +.||||++.........              ....+.  .+++.++|
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h   79 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTG------KIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLREL--KIMNEIKH   79 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCC------CeEEEEEeeccccccccccchhhhcccccchhHHHHH--HHHHhCCC
Confidence            4455 5577999999999999976544      48999998654322100              122222  25666789


Q ss_pred             CceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc
Q 007046          106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR  185 (620)
Q Consensus       106 ~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~  185 (620)
                      +||+++++++..++..|+||||+.|++.+.+.  ....+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.
T Consensus        80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             cceeeeeEEEecCCcEEEEEeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC
Confidence            99999999999999999999999999888875  3467899999999999999999999999999999999999999999


Q ss_pred             EEEeccCCcccccCCC-----------CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 007046          186 AVLGDVGIPHLLLGIP-----------LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC  254 (620)
Q Consensus       186 vkL~DFGla~~~~~~~-----------~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~  254 (620)
                      ++|+|||+++......           ..........+++.|+|||++.+.  ..++.++|+|||||++|+|++|.+||.
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~  235 (335)
T PTZ00024        158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFP  235 (335)
T ss_pred             EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            9999999997664111           011222334678899999998643  246889999999999999999999999


Q ss_pred             CCCHHHHHHHHHhccCCCC--------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          255 GRSVDEIYDAVVRRQEIPP--------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       255 ~~~~~ei~~~i~~~~~~~~--------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.+..+.+..+......+.                          ....++.++.++|.+||..+|++||++++++.
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        236 GENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            8887666555543211110                          11345788999999999999999999999997

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.8e-34  Score=304.51  Aligned_cols=251  Identities=17%  Similarity=0.179  Sum_probs=188.9

Q ss_pred             eeeecc--CceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           47 HRIGRG--PFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        47 ~~IG~G--~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      ..||+|  +||+||+|.+..++      +.||+|++....... ....+.++. .+++.++|+||++++++|..++..|+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e~-~~~~~l~h~niv~~~~~~~~~~~~~~   76 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTG------TLVTVRITDLENCTEEHLKALQNEV-VLSHFFRHPNIMTSWTVFTTGSWLWV   76 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCC------cEEEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCcceEeeeEecCCceEE
Confidence            457776  99999999976655      489999987644322 222223322 35667899999999999999999999


Q ss_pred             EEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          124 IMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       124 VmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ||||+. |++.+++.+.....+++..+..++.||+.||+|||+++|+||||||+|||++.++.++++||+.+........
T Consensus        77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence            999999 5777776654445689999999999999999999999999999999999999999999999986543321110


Q ss_pred             CC----CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--------
Q 007046          203 PS----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------  270 (620)
Q Consensus       203 ~~----~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~--------  270 (620)
                      ..    .......++..|||||++.+. ...++.++|+|||||++|+|++|..||......+..........        
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (328)
T cd08226         157 KAKVVYDFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT  235 (328)
T ss_pred             cccccccccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccc
Confidence            00    011122456789999998643 23478899999999999999999999987665443332221110        


Q ss_pred             -------------------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -------------------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -------------------------------------~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                           ....+..+++++.+||++||..||++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                                 01112346778999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-34  Score=285.13  Aligned_cols=247  Identities=27%  Similarity=0.466  Sum_probs=202.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|++.+.||+|+||.||+|++..++      +.||+|.+.....  .....+..+.  ..+..++|+|++++++++...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   72 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETG------DFVAIKQISLEKIKEEALKSIMQEI--DLLKNLKHPNIVKYIGSIETSD   72 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCC------cEEEEEEecccccCHHHHHHHHHHH--HHHHhCCCCCccEEEEEEEeCC
Confidence            5889999999999999999876554      4799999977653  2222222322  2456678999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..+++|||++| +|.+.+.  ....+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....
T Consensus        73 ~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  150 (254)
T cd06627          73 SLYIILEYAENGSLRQIIK--KFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLN  150 (254)
T ss_pred             EEEEEEecCCCCcHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecC
Confidence            99999999985 5665554  33679999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      ...   .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+. ....+.++..+
T Consensus       151 ~~~---~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  223 (254)
T cd06627         151 DVS---KDDASVVGTPYWMAPEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGI  223 (254)
T ss_pred             CCc---ccccccccchhhcCHhhhcCC---CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCC
Confidence            321   112345789999999998643   47789999999999999999999998776655554443 23445677889


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++.+++.+||..+|++||++.+++.
T Consensus       224 ~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         224 SPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            999999999999999999999999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=9.6e-34  Score=284.25  Aligned_cols=250  Identities=25%  Similarity=0.388  Sum_probs=202.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      +|++.+.||+|+||.||+|.+..++      ..|++|+++.....  ....+..+.  ..++.++|+||+++++.+... 
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   72 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTG------ELMAVKSVELSGDSEEELEALEREI--RILSSLQHPNIVRYYGSERDEE   72 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCC------cEEEEEEeeccccchHHHHHHHHHH--HHHHHcCCCCEeeEEEEEecCC
Confidence            5889999999999999999976544      47999999765532  222222222  256667899999999999988 


Q ss_pred             -CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          119 -GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       119 -~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                       ..++++|||++ +++.+.+..  ...+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||.+..
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606          73 KNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             CCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence             89999999997 566666653  33899999999999999999999999999999999999999999999999999887


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~~~p  275 (620)
                      ....... .......++..|+|||.+...   ..+.++|+||||+++|+|++|..||.... .......+......+.++
T Consensus       151 ~~~~~~~-~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T cd06606         151 LGDIETG-EGTGSVRGTPYWMAPEVIRGE---EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIP  226 (260)
T ss_pred             ccccccc-ccccCCCCCccccCHhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCC
Confidence            6432110 013345789999999998644   47889999999999999999999998765 333444443334556678


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..++.++.++|.+||+.||++||++.++++
T Consensus       227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            888999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5.7e-34  Score=301.24  Aligned_cols=255  Identities=19%  Similarity=0.275  Sum_probs=194.9

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      +|++.+.||+|+||.||+|.+..+.    .+..||+|.+.......  ...... +..++.+..+|+||+++++.+... 
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~-E~~~l~~l~~h~~iv~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETS----EEETVAIKKITNVFSKKILAKRALR-ELKLLRHFRGHKNITCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCC----cCceEEEEEeccccccchhHHHHHH-HHHHHHHhcCCCChheeeeeeeecc
Confidence            5899999999999999999976541    13579999987532221  222222 222344445799999999875432 


Q ss_pred             ---CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          119 ---GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       119 ---~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                         ...|++|||++++|.+.+.  ....+++..++.++.||+.||+|||+.|++||||||+||+++.++.++|+|||+++
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence               4589999999998888775  45678999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---
Q 007046          196 LLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---  271 (620)
Q Consensus       196 ~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~---  271 (620)
                      .+...... ........||+.|+|||.+.+.  ..++.++|+||||+++|+|++|.+||...+....+..+......   
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  231 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE  231 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence            76432211 1122345799999999987532  25788999999999999999999999876654443332221100   


Q ss_pred             --------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 --------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 --------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                ......++.++.+++.+||+.||++||++.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                      0112346789999999999999999999999986

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=7.5e-34  Score=300.48  Aligned_cols=250  Identities=20%  Similarity=0.249  Sum_probs=193.6

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ...++|++.+.||+|+||.||+|.+..++      +.||+|.+...... ........+. .+++.++||||+++++++.
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~   79 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTG------QNVAIKKIMKPFSTPVLAKRTYREL-KLLKHLRHENIISLSDIFI   79 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCC------CEEEEEEecccccccchhHHHHHHH-HHHHhcCCCCeeeEeeeEe
Confidence            34578999999999999999999977655      47999988643221 1112222222 3566678999999999987


Q ss_pred             E-CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 I-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~-~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      . ....|++|||+.+++.+.+   +..++++..+..++.||++||.|||+.+|+||||+|+|||++.++.++|+|||+++
T Consensus        80 ~~~~~~~lv~e~~~~~L~~~~---~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~  156 (328)
T cd07856          80 SPLEDIYFVTELLGTDLHRLL---TSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLAR  156 (328)
T ss_pred             cCCCcEEEEeehhccCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence            5 5678999999988776665   34578899999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-------  268 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~-------  268 (620)
                      ...      .......+++.|+|||.+.+  ...++.++|+||||+++|+|++|..||...........+.+.       
T Consensus       157 ~~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~  228 (328)
T cd07856         157 IQD------PQMTGYVSTRYYRAPEIMLT--WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD  228 (328)
T ss_pred             ccC------CCcCCCcccccccCceeeec--cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            542      12234567899999998753  125788999999999999999999999876653322211110       


Q ss_pred             -----------------cCCCC-----CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 -----------------QEIPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 -----------------~~~~~-----~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                       .....     ....+++++.++|.+||+.+|++||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                             00001     11357899999999999999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.4e-34  Score=293.82  Aligned_cols=252  Identities=23%  Similarity=0.371  Sum_probs=202.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|.+.+.||+|+||.||+|++..++      +.||+|++.....  .........+..++.+..+|+||+++++++...
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   74 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETN------KEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE   74 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCC------CEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC
Confidence            47999999999999999999976554      4899999975322  111222222333333333499999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +..|+||||++ ++|.+.+.  +.+.+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~  152 (280)
T cd05581          75 ENLYFVLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVL  152 (280)
T ss_pred             ceEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence            99999999996 67777665  3457999999999999999999999999999999999999999999999999998876


Q ss_pred             cCCCCC-----------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Q 007046          198 LGIPLP-----------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE  260 (620)
Q Consensus       198 ~~~~~~-----------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e  260 (620)
                      ......                 ........|+..|+|||.+...   .++.++|+||||++++++++|..||...+...
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  229 (280)
T cd05581         153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL  229 (280)
T ss_pred             CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC---CCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence            432211                 0122344688999999998643   57889999999999999999999999887766


Q ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH----HHHHH
Q 007046          261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM----TDILR  305 (620)
Q Consensus       261 i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~----~eil~  305 (620)
                      .++.+..  ....++..+++.+.++|.+||..+|.+||++    .++++
T Consensus       230 ~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         230 TFQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            6666643  3345677889999999999999999999999    77775

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.5e-34  Score=306.02  Aligned_cols=253  Identities=19%  Similarity=0.242  Sum_probs=195.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHcc-CCCceeEeEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQ-GVEGICWLQGISV  116 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~-~h~nIv~l~g~~~  116 (620)
                      .++|++.+.||+|+||.||+|.+..++      ..||+|.+.....  ........ +.. +++.+ +|+||+++++++.
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~------~~~~vK~~~~~~~~~~~~~~~~~-E~~-~l~~l~~h~ni~~~~~~~~   77 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTK------EVVALKKIFDAFRNATDAQRTFR-EIM-FLQELGDHPNIVKLLNVIK   77 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCC------eEEEEEeeccccCcchhhhhhhH-HHH-HHHHhcCCCCccceeeeec
Confidence            357999999999999999999976554      4799998864321  22222222 222 44455 9999999999986


Q ss_pred             EC--CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          117 IN--GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       117 ~~--~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..  ..+|+||||++++|.+.+..   ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~  154 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLA  154 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccch
Confidence            53  36899999999988777643   37889999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCC--CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-
Q 007046          195 HLLLGIPLP--SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-  271 (620)
Q Consensus       195 ~~~~~~~~~--~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-  271 (620)
                      +........  ........||+.|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+....+....+...... 
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07852         155 RSLSELEENPENPVLTDYVATRWYRAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP  232 (337)
T ss_pred             hccccccccccCcchhcccccccccCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            876432211  1223345789999999987532  35778999999999999999999999876655443333221110 


Q ss_pred             ----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ----------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ----------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                  ......++.++.++|.+||+.||++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence                                        0112347899999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2e-34  Score=295.17  Aligned_cols=249  Identities=23%  Similarity=0.293  Sum_probs=198.2

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      |++.+.||+|++|.||+|.+..++      +.+|+|.++.....  ....+..+.  ..++..+|+||+++++++..++.
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~------~~~~ik~~~~~~~~~~~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~~   72 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTG------EIVAIKKIKLRFESEGIPKTALREI--KLLKELNHPNIIKLLDVFRHKGD   72 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCC------cEEEEEEeccccccchhHHHHHHHH--HHHHHhcCCCcchHHHhhccCCC
Confidence            567889999999999999975444      47999998765433  122222222  24556689999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|+||||+++++.+.+.. +...+++..++.++.||+.||.|||+.+|+|+||||+||+++.++.++|+|||.+......
T Consensus        73 ~~~v~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          73 LYLVFEFMDTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             EEEEEeccCCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            999999999988887764 3468999999999999999999999999999999999999999999999999998776432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--------  272 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--------  272 (620)
                      .   .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||...+..+.+..+......+        
T Consensus       152 ~---~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd05118         152 V---RPYTHYVVTRWYRAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF  226 (283)
T ss_pred             c---ccccCccCcccccCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence            1   122334688999999998642  257889999999999999999999998877655544443221110        


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          .....++.++.++|.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                                112346889999999999999999999999986

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=5.5e-34  Score=293.93  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=201.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .+.|+....||+|+||.||+|.+..++      ..||+|++..... ....+..+.  ..++..+|+||+++++++...+
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~-~~~~~~~e~--~~l~~l~~~~i~~~~~~~~~~~   88 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATG------KEVAIKKMRLRKQ-NKELIINEI--LIMKDCKHPNIVDYYDSYLVGD   88 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCC------cEEEEEEEecCch-hHHHHHHHH--HHHHHCCCCCeeEEEEEEEECC
Confidence            455889999999999999999976544      4799999976544 223333332  2556678999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|++|||++ ++|.+.+.. ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          89 ELWVVMEYMDGGSLTDIITQ-NFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             EEEEEEeccCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            9999999999 566666654 22479999999999999999999999999999999999999999999999999887653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-CCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~-~~p~~  277 (620)
                      ..   ........+++.|++||++.+.   .++.++|+||||+++|+|++|..||...+.......+....... ..+..
T Consensus       168 ~~---~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd06614         168 KE---KSKRNSVVGTPYWMAPEVIKRK---DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEK  241 (286)
T ss_pred             cc---hhhhccccCCcccCCHhHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhh
Confidence            21   1122334688999999998643   57889999999999999999999998877766555554332221 22334


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.++.++|.+||+.+|.+||++.++++
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            8999999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1e-34  Score=324.54  Aligned_cols=254  Identities=20%  Similarity=0.207  Sum_probs=183.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEe--------------cCC--chhHHHHHHHHHHHHHHHccC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--------------HPV--KEDRMRVLLERLNDLFLKCQG  104 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l--------------~~~--~~~~~~~~~~~~~~~~l~~~~  104 (620)
                      ++|+++++||+|+||.||+|..+...+.     .+++|.+              .+.  ........+..+. .+++.++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei-~il~~l~  221 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEE-----AEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEI-LALGRLN  221 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchh-----hhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHH-HHHHhCC
Confidence            6899999999999999999987544321     1222211              000  0111111122222 3566779


Q ss_pred             CCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       105 h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~---~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      |+||+++++++...+..|+|||++.+++++.+....   ........+..++.||+.||+|||+++|+||||||+|||++
T Consensus       222 HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~  301 (501)
T PHA03210        222 HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN  301 (501)
T ss_pred             CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence            999999999999999999999999998888765321   12334667889999999999999999999999999999999


Q ss_pred             cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCC--H
Q 007046          182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRS--V  258 (620)
Q Consensus       182 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P-f~~~~--~  258 (620)
                      .++.+||+|||+++.+....  ........||+.|+|||++.+.   .++.++|||||||++|||++|..+ |....  .
T Consensus       302 ~~~~vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~  376 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAGD---GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP  376 (501)
T ss_pred             CCCCEEEEeCCCceecCccc--ccccccccCCcCCCCchhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence            99999999999998764321  1122346799999999998643   688999999999999999998754 43221  1


Q ss_pred             -HHHHHHHHhcc--------------------CCCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          259 -DEIYDAVVRRQ--------------------EIPP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       259 -~ei~~~i~~~~--------------------~~~~---------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       .++.+.+....                    ....         ....++.++.++|.+||.+||.+||++.|++.
T Consensus       377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence             22222111000                    0000         01245678889999999999999999999997

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-36  Score=299.54  Aligned_cols=262  Identities=21%  Similarity=0.239  Sum_probs=211.6

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      .---.++.++++-+..||.|+||+|++-.++.++      +..|||.++....+..+..+..+....++..++||||+++
T Consensus        56 ~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg------~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfy  129 (361)
T KOG1006|consen   56 AHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSG------KLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFY  129 (361)
T ss_pred             ccccccccchHHHHHHhcCCcchhhhhhhcCccC------cEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence            3334478888999999999999999999987766      4899999987766555544445555678888999999999


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEE
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQ---LKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~---~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL  188 (620)
                      |.+..++..||.||+|.-++..++..   ..+..+++.-.-.|..-.+.||.||-.. .|||||+||+|||++..|.+||
T Consensus       130 Ga~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKL  209 (361)
T KOG1006|consen  130 GALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKL  209 (361)
T ss_pred             hhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEee
Confidence            99999999999999999766544432   2457899999999999999999999975 7999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~  267 (620)
                      ||||++..+.+    +-..+.-.|...|||||.+..... .|+.++|+||||++|||+.||..||.+.+. .+.+..+..
T Consensus       210 CDFGIcGqLv~----SiAkT~daGCrpYmAPERi~p~~~-gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~  284 (361)
T KOG1006|consen  210 CDFGICGQLVD----SIAKTVDAGCRPYMAPERIDPSDK-GYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI  284 (361)
T ss_pred             ecccchHhHHH----HHHhhhccCCccccChhccCCccC-CcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc
Confidence            99999987753    222344578999999999986533 599999999999999999999999987653 333444443


Q ss_pred             ccCC-CCCC---CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEI-PPIP---SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~-~~~p---~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+ ...+   -..+..+..+|..||.+|.+.||.+.++++
T Consensus       285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            3221 1122   237899999999999999999999999987

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.6e-34  Score=303.17  Aligned_cols=251  Identities=23%  Similarity=0.263  Sum_probs=196.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      |--.++|++.+.||+|+||.||+|.+..++      +.||||.+....... .......+. .+++.++|+||+++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~   83 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTG------AKVAIKKLYRPFQSELFAKRAYREL-RLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCC------cEEEEEEecccccchHHHHHHHHHH-HHHHhcCCCCccceeeee
Confidence            334778999999999999999999976554      479999986533222 111122222 356777999999999998


Q ss_pred             EECC------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          116 VING------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       116 ~~~~------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      ....      .+|+||||+.+++.+.+.   ...+++..++.++.||+.||+|||+.||+||||||+||+++.++.++|+
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~  160 (343)
T cd07880          84 TPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKIL  160 (343)
T ss_pred             cCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe
Confidence            7643      469999999777766653   4579999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++....      ......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+....+..+....
T Consensus       161 dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~  232 (343)
T cd07880         161 DFGLARQTDS------EMTGYVVTRWYRAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT  232 (343)
T ss_pred             eccccccccc------CccccccCCcccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            9999876522      22345689999999998642  247789999999999999999999998776554444332211


Q ss_pred             CC-----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EI-----------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~-----------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..                             ......+++++.++|.+||+.||++||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            10                             0122467888999999999999999999999986

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-35  Score=312.84  Aligned_cols=259  Identities=21%  Similarity=0.248  Sum_probs=197.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .++-..|+++++||+||-+.||++.....       +.||+|.+..... +....-...+..++.++.+|.+|+.|++|-
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-------~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE  429 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNSDK-------QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE  429 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecCCC-------cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee
Confidence            47778899999999999999999985433       3578777654332 222222333344677888999999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..++++||||||=+-+|-..+.. +...++.-.++.|..|++.++.++|.+||||.||||.|+|+- .|.+||+|||+|.
T Consensus       430 v~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~  507 (677)
T KOG0596|consen  430 VTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIAN  507 (677)
T ss_pred             ccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhc
Confidence            99999999999988887777764 444455458999999999999999999999999999999987 5899999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCC--------CCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHH
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG--------PISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVV  266 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~--------~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~  266 (620)
                      .+.... .+-.....+||+.||+||.+.....+        ..+.++||||||||||+|+.|++||.... ...-+..|.
T Consensus       508 aI~~DT-TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~  586 (677)
T KOG0596|consen  508 AIQPDT-TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAIT  586 (677)
T ss_pred             ccCccc-cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhc
Confidence            774321 12223456899999999998543221        36788999999999999999999997654 223333343


Q ss_pred             hccCCCCCCCCCCHH-HHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 RRQEIPPIPSGLPPA-VENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~-l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .-....++|..-+.. +.++++.||+.||.+||++.++|+
T Consensus       587 ~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  587 DPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             CCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            222222344333333 999999999999999999999997

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-35  Score=296.31  Aligned_cols=246  Identities=20%  Similarity=0.257  Sum_probs=202.3

Q ss_pred             CCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--
Q 007046           41 SALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--  117 (620)
Q Consensus        41 ~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--  117 (620)
                      ++|++. ++||-|--|.|-.+.++.|++      .+|+|+|.....      .+++.++......|+|||.+++++..  
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~e------kfALKvL~Ds~K------ARrEVeLHw~~s~h~~iV~IidVyeNs~  128 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQE------KFALKVLLDSPK------ARREVELHWMASGHPHIVSIIDVYENSY  128 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchh------hhHHHHHhcCHH------HHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence            456665 579999999999999998886      699999953221      12233355667799999999999864  


Q ss_pred             --CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEecc
Q 007046          118 --NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDV  191 (620)
Q Consensus       118 --~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~DF  191 (620)
                        ...+.||||.++ |.|+..+....+..+++.++..|+.||+.|+.|||+.+|.||||||+|+|...   |..+||+||
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDf  208 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDF  208 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccc
Confidence              345889999999 57777787766788999999999999999999999999999999999999964   457899999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHh
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVR  267 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~~  267 (620)
                      |+|+....    .....+.|-||.|.|||++..+   .|+..+|+||+||++|-||+|.+||....-    ..+...|..
T Consensus       209 GFAK~t~~----~~~L~TPc~TPyYvaPevlg~e---KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  209 GFAKETQE----PGDLMTPCFTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             ccccccCC----CccccCCcccccccCHHHhCch---hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            99987542    3456677999999999999644   688899999999999999999999987543    345566766


Q ss_pred             ccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++...+-|  +.+|++++++|+.+|..+|++|.++.++++
T Consensus       282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            65544333  568999999999999999999999999987

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9.1e-34  Score=301.77  Aligned_cols=251  Identities=20%  Similarity=0.237  Sum_probs=196.2

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .|...++|.+.+.||+|+||.||+|.+..++      +.||+|++.......  ...+..+ . ..++.++|+||+++++
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E-i-~~l~~l~h~~iv~~~~   83 (345)
T cd07877          12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTYRE-L-RLLKHMKHENVIGLLD   83 (345)
T ss_pred             HhhccCceEEEEEeeecCCeEEEEEEEcCCC------eEEEEEEecCcchhhHHHHHHHHH-H-HHHHHcCCCcccceee
Confidence            3556789999999999999999999876544      489999997543221  2222222 2 3566679999999999


Q ss_pred             EEEEC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          114 ISVIN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       114 ~~~~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      ++...      ...|++++++.+++.+.+.   ...+++..+..++.||+.||+|||+.+|+||||||+||+++.++.++
T Consensus        84 ~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          84 VFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             eeeecccccccccEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEE
Confidence            88643      3478999999888776663   34689999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||+++...      .......||+.|+|||.+.+.  ..++.++|+|||||++|+|++|+.||...+....+..+..
T Consensus       161 l~dfg~~~~~~------~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~  232 (345)
T cd07877         161 ILDFGLARHTD------DEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR  232 (345)
T ss_pred             Eeccccccccc------ccccccccCCCccCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999987642      122345789999999987532  3577899999999999999999999987665544443322


Q ss_pred             ccCC---------------------CC--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEI---------------------PP--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~---------------------~~--------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....                     +.        .....++++.++|.+||..||.+||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            1110                     00        11246788999999999999999999999997

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.9e-34  Score=302.80  Aligned_cols=250  Identities=21%  Similarity=0.268  Sum_probs=199.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +...++|++.+.||+|+||.||+|.+..++      +.||||++......  .......+ . .+++.++|+||++++++
T Consensus        11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~E-~-~~l~~l~h~~iv~~~~~   82 (343)
T cd07851          11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTG------RKVAIKKLSRPFQSAIHAKRTYRE-L-RLLKHMDHENVIGLLDV   82 (343)
T ss_pred             ecccCceEEEEEeccCCceEEEEEEECCCC------cEEEEEecccccchhhHHHHHHHH-H-HHHHhccCCCHHHHHHH
Confidence            334678999999999999999999986654      47999998753221  22222222 2 24566799999999988


Q ss_pred             EEECCE------EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVINGK------ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~~~------~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      +...+.      .|+||||+.++|.+++.   ..++++..+..++.||+.||.|||+.||+||||||+||+++.++.++|
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL  159 (343)
T cd07851          83 FTPASSLEDFQDVYLVTHLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKI  159 (343)
T ss_pred             hhccccccccccEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEE
Confidence            766554      89999999888877774   357999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||++.....      ......+|+.|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+.+..+.+..+...
T Consensus       160 ~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~  231 (343)
T cd07851         160 LDFGLARHTDD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNL  231 (343)
T ss_pred             ccccccccccc------cccCCcccccccCHHHHhCC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Confidence            99999876532      23445789999999997542  25778999999999999999999999887776655554432


Q ss_pred             cCCCC-----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPP-----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~-----------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+.                             ....+++++.++|.+||..||++||++.+|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         232 VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            21110                             11346889999999999999999999999987

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=7.3e-34  Score=295.44  Aligned_cols=247  Identities=21%  Similarity=0.304  Sum_probs=196.5

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      |....+||+|+||.||++.+..++      ..||||.+..........+..+.  ..++.++|+||+++++++..++..|
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~~~~~   93 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSG------KLVAVKKMDLRKQQRRELLFNEV--VIMRDYQHENVVEMYNSYLVGDELW   93 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCC------eEEEEEEecccchhHHHHHHHHH--HHHHhcCCcchhheeeEEEeCCEEE
Confidence            334467999999999999876655      48999998654433322333332  3566778999999999999999999


Q ss_pred             EEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCC
Q 007046          123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL  202 (620)
Q Consensus       123 IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~  202 (620)
                      ++|||+++..+..+.  ....+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++......  
T Consensus        94 lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~--  169 (292)
T cd06657          94 VVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--  169 (292)
T ss_pred             EEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc--
Confidence            999999965444443  3457899999999999999999999999999999999999999999999999998765321  


Q ss_pred             CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCCCHH
Q 007046          203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPA  281 (620)
Q Consensus       203 ~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~s~~  281 (620)
                       ........||+.|+|||.+.+   ..++.++|+||||+++|+|++|..||.+....+....+..... .......++++
T Consensus       170 -~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T cd06657         170 -VPRRKSLVGTPYWMAPELISR---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPS  245 (292)
T ss_pred             -cccccccccCccccCHHHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHH
Confidence             112233568999999999853   3578899999999999999999999988777666555543221 11233567899


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          282 VENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.+++.+||..||.+||++.++++
T Consensus       246 l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         246 LKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHhCCcccCcCHHHHhc
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.5e-34  Score=301.49  Aligned_cols=249  Identities=22%  Similarity=0.297  Sum_probs=193.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-hH-HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-DR-MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      |--.++|.+.+.||+|+||.||+|++..++      +.||+|+++.... +. ...+..+ . .+++..+|+||++++++
T Consensus        11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e-~-~~l~~l~h~niv~~~~~   82 (342)
T cd07879          11 WELPERYTSLKQVGSGAYGSVCSAIDKRTG------EKVAIKKLSRPFQSEIFAKRAYRE-L-TLLKHMQHENVIGLLDV   82 (342)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEeCCCC------cEEEEEEecCccccccchhHHHHH-H-HHHHhcCCCCccchhhe
Confidence            333578999999999999999999976554      4799999875322 11 1222222 2 25566799999999999


Q ss_pred             EEEC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVIN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      +...      ..+|+||||+..++.+..    +..+++..+..++.|++.||+|||+.+++||||||+|||++.++.++|
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL  158 (342)
T cd07879          83 FTSAVSGDEFQDFYLVMPYMQTDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKI  158 (342)
T ss_pred             ecccccCCCCceEEEEecccccCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            8754      246999999987655443    346899999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++...      .......+|+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+....+..+...
T Consensus       159 ~dfg~~~~~~------~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~  230 (342)
T cd07879         159 LDFGLARHAD------AEMTGYVVTRWYRAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV  230 (342)
T ss_pred             eeCCCCcCCC------CCCCCceeeecccChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            9999987542      122345789999999998532  24788999999999999999999999887755544443321


Q ss_pred             cCC---------------------CCC--------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEI---------------------PPI--------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~---------------------~~~--------p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...                     +..        ....++++.++|.+||+.||.+||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            100                     000        1246788999999999999999999999996

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-35  Score=293.61  Aligned_cols=253  Identities=19%  Similarity=0.302  Sum_probs=203.0

Q ss_pred             eeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           43 LKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        43 y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      |++. +.||+|+|+.|--+....++.      +||||++.+.........+++. +.+..|++|+||+.++++|+++.++
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~------EYAVKiidKq~gHsR~RvfREV-e~f~~Cqgh~nilqLiefFEdd~~F  151 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGK------EYAVKIIDKQPGHSRSRVFREV-ETFYQCQGHKNILQLIEFFEDDTRF  151 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccch------hhhhhhhhcCCchHHHHHHHHH-HHHHHhcCCccHHHHHHHhcccceE
Confidence            5554 568999999999999877764      7999999887544444444444 4788999999999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cEEEeccCCcccc
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLL  197 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~vkL~DFGla~~~  197 (620)
                      |||||-+. |.++..+.  +...|++.++.++..+|+.||.|||.+||.||||||+|||-....   -+|||||.+....
T Consensus       152 YLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  152 YLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             EEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence            99999998 67777776  456799999999999999999999999999999999999997665   4799999887654


Q ss_pred             cCCC----CCCCCCCCcCCCCCCCCccccc---CCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------------
Q 007046          198 LGIP----LPSSDLPRRLGTPNYMAPEQWQ---PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------------  257 (620)
Q Consensus       198 ~~~~----~~~~~~~~~~GT~~YmAPE~~~---~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-------------  257 (620)
                      .-..    .......+.+|+..|||||+..   ++ -.-|+.++|+||||+|+|-||+|.+||.+.-             
T Consensus       230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~q-A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQ-ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             ccCCCCCCCCCccccCcccchhhcchhHHhhhccc-cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence            3211    1222345678999999999874   22 2258899999999999999999999997531             


Q ss_pred             --HHHHHHHHHhccCCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          258 --VDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       258 --~~ei~~~i~~~~~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        ...+++.|..+....+  -...+|.+.++++..+|..|+.+|.++..+++
T Consensus       309 ~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  309 VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence              2456666765544322  12468999999999999999999999999887

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=4e-33  Score=321.62  Aligned_cols=147  Identities=21%  Similarity=0.277  Sum_probs=122.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.++||+|+||.||+|.+..++      +.||||+++.....  .....+..+. .++..++|+||+++++++..
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~------~~vAiKvi~~~~~~~~~~~~~~~~E~-~~l~~l~hp~Iv~~~~~~~~   75 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNS------KLYAVKVVKKADMINKNMVHQVQAER-DALALSKSPFIVHLYYSLQS   75 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEehhhccCHHHHHHHHHHH-HHHHhcCCCCcCeEEEEEEE
Confidence            478999999999999999999987654      48999999754321  1122222222 34567799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .+.+||||||+. ++|.+++.  ..+.+++..++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        76 ~~~~~lVmEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          76 ANNVYLVMEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999997 56666664  34578999999999999999999999999999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=322.38  Aligned_cols=269  Identities=20%  Similarity=0.316  Sum_probs=223.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+++.+++.+.+.||+|.||.|++|..+..... ......||||+++..........+..+...+....+|+||+.+.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            6778899999999999999999999997654432 223678999999876666555555555556777889999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK------------G--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~------------~--~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      +|...+.+++|+||+. |+|++++...+            .  ..++..+.+.++.|||.|++||++.+++||||..+||
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV  449 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV  449 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence            9999999999999998 89998887644            0  1389999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCC--CCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG--TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG  255 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~G--T~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~  255 (620)
                      |+..+..+||+|||+|+..........  ....|  ...|||||.+..   ..|+.++||||||++|||++| |..||.+
T Consensus       450 Li~~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~---~~ft~kSDVWSfGI~L~EifsLG~~PYp~  524 (609)
T KOG0200|consen  450 LITKNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFD---RVFTSKSDVWSFGILLWEIFTLGGTPYPG  524 (609)
T ss_pred             EecCCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhcc---CcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence            999999999999999996543222111  11122  345999999974   379999999999999999999 9999998


Q ss_pred             CC-HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          256 RS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       256 ~~-~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .. ..++++.+. ...+...|..|++++.++++.||..+|++||++.++.+.|..
T Consensus       525 ~~~~~~l~~~l~-~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  525 IPPTEELLEFLK-EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             CCcHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            66 667776554 445566799999999999999999999999999999998776

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=289.32  Aligned_cols=249  Identities=22%  Similarity=0.266  Sum_probs=196.9

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      |++.+.||+|+||.||+|++..++      +.||+|+++.....  ....+..+.  ..++..+|+||+++++++...+.
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~--~~l~~~~~~~i~~~~~~~~~~~~   72 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTG------EIVALKKIRLDNEEEGIPSTALREI--SLLKELKHPNIVKLLDVIHTERK   72 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCC------cEEEEEEeccccccccccHHHHHHH--HHHHhcCCCCHHHHHhhhhcCCc
Confidence            677889999999999999976654      48999999865421  112222222  24566689999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .++||||+++++.+.+... ...+++..+..++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||+++.....
T Consensus        73 ~~~v~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~  151 (282)
T cd07829          73 LYLVFEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP  151 (282)
T ss_pred             eEEEecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence            9999999999888888642 257999999999999999999999999999999999999999999999999998766321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---------  271 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~---------  271 (620)
                         ........++..|+|||.+.+.  ..++.++|+||||+++|||++|.+||.+.+..+.+..+......         
T Consensus       152 ---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07829         152 ---LRTYTHEVVTLWYRAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV  226 (282)
T ss_pred             ---ccccCccccCcCcCChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence               1122334568889999998632  25788999999999999999999999887765554444321100         


Q ss_pred             ----------C--------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ----------P--------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ----------~--------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                +        .....++.++.++|.+||..||++||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                      0        001234788999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.4e-33  Score=286.26  Aligned_cols=249  Identities=25%  Similarity=0.424  Sum_probs=196.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---h-HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---D-RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +|.+.+.||+|+||.||++.+.....      .+++|+++....   . ........+ ..+++.++||||+++++++..
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~   73 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVA------EERLKVLKEIPVGELNPNETVQANQE-AQLLSKLDHPAIVKFHASFLE   73 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCC------cceEEEeccccccccCcchHHHHHHH-HHHHHhCCCCcHHHHHHHHhc
Confidence            58999999999999999998765542      466666654221   1 111111112 235667799999999999998


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ....|+||||+++ ++.+.+...  ....+++..++.++.|++.||.|||+++++|+||||+||+++. +.++|+|||++
T Consensus        74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~  152 (260)
T cd08222          74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVS  152 (260)
T ss_pred             CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCce
Confidence            8999999999995 555555432  3467899999999999999999999999999999999999975 67999999998


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      +......   .......|++.|+|||.+.+   ..++.++|+||||+++|+|++|..||......+....+.. ...+..
T Consensus       153 ~~~~~~~---~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~  225 (260)
T cd08222         153 RLLMGSC---DLATTFTGTPYYMSPEALKH---QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-GPTPSL  225 (260)
T ss_pred             eecCCCc---ccccCCCCCcCccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-CCCCCC
Confidence            7764321   12234568999999999853   3577899999999999999999999987776666655543 334556


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..++.++.++|.+||..||++||++.++++
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            7788999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2.7e-33  Score=292.59  Aligned_cols=244  Identities=16%  Similarity=0.185  Sum_probs=180.1

Q ss_pred             CceEEEEEEEcCCCcCCCcceEEEEEEecCCc--hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCC-
Q 007046           53 PFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-  129 (620)
Q Consensus        53 ~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~-  129 (620)
                      ++|.||.++...++      +.||||++....  ......+..+.  ..++.++|+||+++++++...+..|++|||++ 
T Consensus        12 ~~~~v~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~Ei--~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (314)
T cd08216          12 DLMIVHLAKHKPTN------TLVAVKKINLDSCSKEDLKLLQQEI--ITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY   83 (314)
T ss_pred             CCceEEEEEecCCC------CEEEEEEEeccccchhHHHHHHHHH--HHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence            34445555544433      589999997652  22222222222  35566789999999999999999999999999 


Q ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC----CC
Q 007046          130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP----SS  205 (620)
Q Consensus       130 GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~----~~  205 (620)
                      |++.+++.......+++..+..++.||+.||+|||+++|+||||||+||+++.++.++|+|||.+..+......    ..
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~  163 (314)
T cd08216          84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD  163 (314)
T ss_pred             CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence            56666665444567899999999999999999999999999999999999999999999999998765432111    11


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--------------
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------------  271 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~--------------  271 (620)
                      ......++..|+|||++... ...++.++|+|||||++|||++|..||........+.........              
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (314)
T cd08216         164 FPKSSVKNLPWLSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS  242 (314)
T ss_pred             ccccccccccccCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence            12334678899999998643 234788999999999999999999999876544332211111000              


Q ss_pred             ------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                        ...+..++.++.+++.+||..||++||+++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                              0011233567889999999999999999999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-35  Score=307.69  Aligned_cols=252  Identities=22%  Similarity=0.300  Sum_probs=208.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      +.||+|.||+||-|+++.++.      .||||++.+......++...+.+..+++.++||+||.+.-.|++.++++.|||
T Consensus       570 evLGSGQFG~VYgg~hRktGr------dVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME  643 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGR------DVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME  643 (888)
T ss_pred             hhccCCcceeeecceecccCc------eeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence            789999999999999988875      69999998765433333333333357788899999999999999999999999


Q ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEEeccCCcccccCCCCC
Q 007046          127 FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGIPLP  203 (620)
Q Consensus       127 ~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL~DFGla~~~~~~~~~  203 (620)
                      -+.|+.++.+.....++|++....+++.||+.||.|||.++|+|.||||+|||+...   -.+||||||+|+.+..    
T Consensus       644 Kl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE----  719 (888)
T KOG4236|consen  644 KLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE----  719 (888)
T ss_pred             hhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch----
Confidence            999999999988788999999999999999999999999999999999999999765   3799999999998843    


Q ss_pred             CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CCCCCCCCCCHH
Q 007046          204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--EIPPIPSGLPPA  281 (620)
Q Consensus       204 ~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~--~~~~~p~~~s~~  281 (620)
                      .+.....+|||.|+|||+++.+   .|+..-|+||.|+|+|--|.|..||...  +++-++|.+..  .++.....++++
T Consensus       720 ksFRrsVVGTPAYLaPEVLrnk---GyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~  794 (888)
T KOG4236|consen  720 KSFRRSVVGTPAYLAPEVLRNK---GYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPE  794 (888)
T ss_pred             hhhhhhhcCCccccCHHHHhhc---cccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHH
Confidence            2334556899999999999754   6998999999999999999999999532  34444454332  334445679999


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHH--HHHhCCCC
Q 007046          282 VENVLLGCFEYDLRSRPLMTDILR--VFKSDGGW  313 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil~--~L~~~~~~  313 (620)
                      +.+||..+|+..-++|.+....+.  +|+.-..|
T Consensus       795 AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w  828 (888)
T KOG4236|consen  795 AIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTW  828 (888)
T ss_pred             HHHHHHHHHHHHHHHhcchHhhccchhhhcchHH
Confidence            999999999999999999988775  44443333

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-34  Score=312.66  Aligned_cols=240  Identities=21%  Similarity=0.266  Sum_probs=199.6

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..+.|.+...||.|+|+.|-.+.+..+.      +..|+|++.....+.     .++..+.+...+|+||+++++.+.++
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~------~~~~vkii~~~~~~~-----~~e~~~~~~~~~h~niv~~~~v~~~~  388 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTD------QEPAVKIISKRADDN-----QDEIPISLLVRDHPNIVKSHDVYEDG  388 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccc------cchhheecccccccc-----ccccchhhhhcCCCcceeecceecCC
Confidence            4678999999999999999999987665      479999997653222     12233456678999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE-ccCCcEEEeccCCccc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVLGDVGIPHL  196 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl-d~~~~vkL~DFGla~~  196 (620)
                      ...|+|||++.| .+++.+.   ..+....++..|+.||+.|+.|||++|++||||||+|||+ +..++++|+|||.++.
T Consensus       389 ~~~~~v~e~l~g~ell~ri~---~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  389 KEIYLVMELLDGGELLRRIR---SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             ceeeeeehhccccHHHHHHH---hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence            999999999996 4455543   3333447888899999999999999999999999999999 5889999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIP  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~~~~p  275 (620)
                      ...      ...+.+-|..|.|||++...   .|+.+|||||||++||+||+|+.||...... +++..+    ..+.+.
T Consensus       466 ~~~------~~~tp~~t~~y~APEvl~~~---~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s  532 (612)
T KOG0603|consen  466 LER------SCDTPALTLQYVAPEVLAIQ---EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS  532 (612)
T ss_pred             Cch------hhcccchhhcccChhhhccC---CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccc
Confidence            643      24455778999999999743   7999999999999999999999999876665 455444    345556


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+|.++++|+++||+.||.+||++.++..
T Consensus       533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  533 ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            899999999999999999999999999986

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-33  Score=279.22  Aligned_cols=239  Identities=25%  Similarity=0.354  Sum_probs=195.6

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ||+|+||.||++.+..++      ..||+|+++.....   ....+..+.  .+++..+|+||+++++.+..+...|++|
T Consensus         1 lg~G~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~~~~~v~   72 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTG------KLYAMKVLKKKKIIKRKEVEHTLTER--NILSRINHPFIVKLHYAFQTEEKLYLVL   72 (250)
T ss_pred             CCCCCceEEEEEEECCCC------cEEEEEEeehhhhcchHHHHHHHHHH--HHHHHcCCCcHHHHHHHeecCCeeEEEE
Confidence            699999999999976544      47999998764432   122222222  2566678999999999999999999999


Q ss_pred             ecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCC
Q 007046          126 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS  204 (620)
Q Consensus       126 E~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~  204 (620)
                      ||++ ++|.+.+..  ...+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.......   
T Consensus        73 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---  147 (250)
T cd05123          73 EYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---  147 (250)
T ss_pred             ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC---
Confidence            9996 677777653  3478999999999999999999999999999999999999999999999999987764321   


Q ss_pred             CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHH
Q 007046          205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  284 (620)
Q Consensus       205 ~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~  284 (620)
                      .......++..|++||.+.+.   ..+.++|+||||+++|++++|..||...+..+....+..  ....++..++.++.+
T Consensus       148 ~~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~  222 (250)
T cd05123         148 SRTNTFCGTPEYLAPEVLLGK---GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARD  222 (250)
T ss_pred             CcccCCcCCccccChHHhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHH
Confidence            223445789999999998643   477899999999999999999999988887777776654  445678888999999


Q ss_pred             HHHHhhhcCcCCCCCH---HHHHH
Q 007046          285 VLLGCFEYDLRSRPLM---TDILR  305 (620)
Q Consensus       285 Li~~cL~~dP~~RPs~---~eil~  305 (620)
                      ++++||..||++||++   .++++
T Consensus       223 ~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         223 LISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HHHHHhcCCHhhCCCcccHHHHHh
Confidence            9999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=312.96  Aligned_cols=255  Identities=21%  Similarity=0.379  Sum_probs=213.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--  117 (620)
                      .+-|++.+.||.|.+|.||+++++.++      +.+|+|+++.....+.+..  .+..+++..-+|||++.++|++..  
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~------~~aa~kI~~~~~d~deEiE--~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTG------QLAAIKIMDPTEDEEEEIE--LEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecC------ceeeeEeecCCccccHHHH--HHHHHHHhccCCCCcceEEEEEEEec
Confidence            356999999999999999999977655      5799999987665544433  333356777899999999999875  


Q ss_pred             ---CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          118 ---NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       118 ---~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                         ++.+|||||||. |+.-|+.+...+.++.|..+.-|++.++.||.+||.+.++|||+|-.|||+..++.+||+|||+
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGv  169 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGV  169 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeee
Confidence               578999999998 7888888888889999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +..+..   ......+++|||.|||||++.+.  ....|+.++|+||||++..||.-|.+|+.++.+...+-.|-....+
T Consensus       170 SaQlds---T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPP  246 (953)
T KOG0587|consen  170 SAQLDS---TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPP  246 (953)
T ss_pred             eeeeec---ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCc
Confidence            988754   34455678999999999999753  3345778999999999999999999999999887766555322211


Q ss_pred             C-CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 P-PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~-~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      - .-|...++++.++|..||.+|..+||++.++++
T Consensus       247 kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  247 KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             cccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            1 125678899999999999999999999998876

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-34  Score=312.05  Aligned_cols=279  Identities=20%  Similarity=0.319  Sum_probs=225.7

Q ss_pred             cchhhhhhccCCCCCCCcCC-CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHH
Q 007046           21 SDHLRTAVATSNDTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDL   98 (620)
Q Consensus        21 ~~~l~~~~~~s~~~~~~I~~-~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~   98 (620)
                      .+.++-+....+.....|.. ...+..++||+|+||+||+|.+...++.  -..+||||++......+. .+++++.  .
T Consensus       675 ~eplapS~~~~n~~~lrI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~--vKipVaiKvl~~~t~~~~s~e~LdeA--l  750 (1177)
T KOG1025|consen  675 VEPLAPSGFAANLALLRILKETELKKDKVLGSGAFGTVYKGIWIPEGEN--VKIPVAIKVLIEFTSPKASIELLDEA--L  750 (1177)
T ss_pred             cCccccccccchhhheeechhhhhhhhceeccccceeEEeeeEecCCce--ecceeEEEEeeccCCchhhHHHHHHH--H
Confidence            33444444444444444433 4566778999999999999999876543  356899999976554433 3333333  4


Q ss_pred             HHHccCCCceeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046           99 FLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus        99 ~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      .+..++|+|+++|+++|.... +.||++|++ |.|+|++.. ...++-....+.|..||++|+.|||.++++||||..+|
T Consensus       751 ~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRN  828 (1177)
T KOG1025|consen  751 RMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARN  828 (1177)
T ss_pred             HHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhh
Confidence            678899999999999998765 999999999 888888876 56788999999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      +|+.+..++||.|||+++.+....... ......-.+.|||-|.+.   ...|+.++|||||||++||++| |..||.+.
T Consensus       829 VLVksP~hvkitdfgla~ll~~d~~ey-~~~~gK~pikwmale~i~---~~~~thqSDVWsfGVtiWElmTFGa~Py~gi  904 (1177)
T KOG1025|consen  829 VLVKSPNHVKITDFGLAKLLAPDEKEY-SAPGGKVPIKWMALESIR---IRKYTHQSDVWSFGVTIWELMTFGAKPYDGI  904 (1177)
T ss_pred             eeecCCCeEEEEecchhhccCcccccc-cccccccCcHHHHHHHhh---ccCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence            999999999999999999875432211 122223457899999986   4579999999999999999999 99999999


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+++-+.+..+.+ .+.|+.++-++..++.+||..|+..||+++++...|.+.
T Consensus       905 ~~~eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~  957 (1177)
T KOG1025|consen  905 PAEEIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM  957 (1177)
T ss_pred             CHHHhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence            99999887765554 667999999999999999999999999999999877764

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.5e-33  Score=321.92  Aligned_cols=254  Identities=20%  Similarity=0.268  Sum_probs=191.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE---
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI---  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~---  117 (620)
                      ++|+.++.||+||||.||+++++-++      +.||||++.....+..-....++. .+++.++|||||+++..+..   
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDG------r~YAIKKIpl~~s~~~~skI~rEV-k~LArLnHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDG------REYAIKKIPLKASDKLYSKILREV-KLLARLNHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccc------hhhhhhhccCchHHHHHHHHHHHH-HHHhhcCCcceeeeehhhhccCC
Confidence            56788899999999999999987665      579999997665333222222222 46788999999998854210   


Q ss_pred             --------------------------------------------------------------------------------
Q 007046          118 --------------------------------------------------------------------------------  117 (620)
Q Consensus       118 --------------------------------------------------------------------------------  117 (620)
                                                                                                      
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------C--------CEEEEEEecCCCChHHHHHHhcCCCC-CHHHHHHHHHHHHHHH
Q 007046          118 ----------------------------N--------GKICIIMKFYEGSVGDRMAQLKGGKL-SLSNVFRYAIDLAQGI  160 (620)
Q Consensus       118 ----------------------------~--------~~~~IVmE~~~GsLld~l~~~~~~~l-~~~~~~~i~~qIa~gL  160 (620)
                                                  +        ..+||-||||+-++++.+.+.+. .. ....++++++||++||
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-~~~~~d~~wrLFreIlEGL  710 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-FNSQRDEAWRLFREILEGL  710 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-cchhhHHHHHHHHHHHHHH
Confidence                                        0        13589999999888888775322 22 4788999999999999


Q ss_pred             HHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc----C----------CC-CCCCCCCCcCCCCCCCCcccccCC
Q 007046          161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL----G----------IP-LPSSDLPRRLGTPNYMAPEQWQPE  225 (620)
Q Consensus       161 ~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~----~----------~~-~~~~~~~~~~GT~~YmAPE~~~~~  225 (620)
                      .|+|++|||||||||.||++++++.|||+|||+|+...    .          .. ......+..+||.-|+|||.+.+.
T Consensus       711 aYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~  790 (1351)
T KOG1035|consen  711 AYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT  790 (1351)
T ss_pred             HHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence            99999999999999999999999999999999998732    0          00 112245677899999999999876


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhccCCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHH
Q 007046          226 VRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTD  302 (620)
Q Consensus       226 ~~~~~s~~sDVwSlGvil~elltG~~Pf~-~~~~~ei~~~i~~~~~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~e  302 (620)
                      ....|+.|+|+||||++++||+   .||. .+....++..+.+...+.+  +...--+.-..+|+.|++.||++|||+.|
T Consensus       791 ~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e  867 (1351)
T KOG1035|consen  791 SSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE  867 (1351)
T ss_pred             ccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence            5457999999999999999999   4554 2334445555543332222  12223355678999999999999999999


Q ss_pred             HHH
Q 007046          303 ILR  305 (620)
Q Consensus       303 il~  305 (620)
                      +|+
T Consensus       868 LL~  870 (1351)
T KOG1035|consen  868 LLN  870 (1351)
T ss_pred             Hhh
Confidence            987

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.4e-32  Score=276.69  Aligned_cols=219  Identities=18%  Similarity=0.208  Sum_probs=175.3

Q ss_pred             cCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCC-C
Q 007046           52 GPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-G  130 (620)
Q Consensus        52 G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~-G  130 (620)
                      |.||.||++.+..++      +.||+|.++......      .+. .......||||+++++++...+..|+||||++ |
T Consensus         4 g~~~~v~~~~~~~~~------~~~~~K~i~~~~~~~------~~~-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQ------QTFILKGLRKSSEYS------RER-LTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCC------cEEEEEeecchhhhh------hHH-HHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            899999999987665      489999997643211      111 12223468999999999999999999999999 5


Q ss_pred             ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCc
Q 007046          131 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR  210 (620)
Q Consensus       131 sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~  210 (620)
                      +|.+.+..  ...+++..+..++.|++.||+|||+++|+||||||+||+++.++.++++|||++.....      .....
T Consensus        71 ~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~------~~~~~  142 (237)
T cd05576          71 KLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED------SCDGE  142 (237)
T ss_pred             CHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc------ccccC
Confidence            77777653  45689999999999999999999999999999999999999999999999998765532      22334


Q ss_pred             CCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhh
Q 007046          211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF  290 (620)
Q Consensus       211 ~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL  290 (620)
                      .++..|+|||.+..   ..++.++|+||+|+++|||++|..|+...... +     .......+|..+++.++++|.+||
T Consensus       143 ~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~li~~~l  213 (237)
T cd05576         143 AVENMYCAPEVGGI---SEETEACDWWSLGAILFELLTGKTLVECHPSG-I-----NTHTTLNIPEWVSEEARSLLQQLL  213 (237)
T ss_pred             CcCccccCCcccCC---CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c-----ccccccCCcccCCHHHHHHHHHHc
Confidence            56788999999853   35788999999999999999999887543221 1     111223466788999999999999


Q ss_pred             hcCcCCCCCH
Q 007046          291 EYDLRSRPLM  300 (620)
Q Consensus       291 ~~dP~~RPs~  300 (620)
                      +.||++||++
T Consensus       214 ~~dp~~R~~~  223 (237)
T cd05576         214 QFNPTERLGA  223 (237)
T ss_pred             cCCHHHhcCC
Confidence            9999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-33  Score=267.50  Aligned_cols=247  Identities=23%  Similarity=0.300  Sum_probs=195.3

Q ss_pred             CCCCCCccccccCCcchhhhhhccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh
Q 007046            7 AGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED   86 (620)
Q Consensus         7 ~~~p~~~~~e~~~~~~~l~~~~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~   86 (620)
                      .|.|.+...+.++.    ++...-.+. +..+..+++.-+..||+|+||.|=+-++.+++      ...|+|.++..-..
T Consensus        17 ~P~~~~tpp~~Ld~----~a~i~I~~~-~~eV~ad~L~~i~elGrGayG~vekmrh~~sg------~imAvKri~~tvn~   85 (282)
T KOG0984|consen   17 LPAPRETPPRNLDS----RALIYIGDR-NFEVPADDLVGIEELGRGAYGVVEKMRHIQSG------TIMAVKRIRATVNS   85 (282)
T ss_pred             CCCcCCCCCcccCC----CceEEEecC-ccccchhhhhhhhhhcCCccchhhheeeccCC------eEEEEeeehhhcCh
Confidence            34444445555443    222222322 37788899999999999999999999987776      48999999865554


Q ss_pred             HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHH
Q 007046           87 RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQ--LKGGKLSLSNVFRYAIDLAQGILQLH  164 (620)
Q Consensus        87 ~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~--~~~~~l~~~~~~~i~~qIa~gL~yLH  164 (620)
                      +.+..+-....+.+++..+|.+|+++|.....+..+|.||.|.-++..+..+  .+++.+++...-+|+..+..||.|||
T Consensus        86 q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~  165 (282)
T KOG0984|consen   86 QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH  165 (282)
T ss_pred             HHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH
Confidence            4444444444567888999999999999989999999999998766544432  25688999999999999999999999


Q ss_pred             HC-CCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCC-CCCchhhHHHHHHH
Q 007046          165 SK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACS  242 (620)
Q Consensus       165 s~-gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~-~~s~~sDVwSlGvi  242 (620)
                      ++ .+||||+||+||||+.+|++|+||||++-.+.+    +-..+...|...|||||.+..+... .|+.++||||||++
T Consensus       166 ~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d----SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt  241 (282)
T KOG0984|consen  166 SKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD----SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT  241 (282)
T ss_pred             HHhhhhhccCCcceEEEccCCcEEEcccccceeehh----hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence            87 899999999999999999999999999988753    1222335788999999999865444 79999999999999


Q ss_pred             HHHHHhCCCCCCC-CCHHHHHHHHHhc
Q 007046          243 IIEMLTGVQPRCG-RSVDEIYDAVVRR  268 (620)
Q Consensus       243 l~elltG~~Pf~~-~~~~ei~~~i~~~  268 (620)
                      ++||.+++.||.. .++.+.+.++.+.
T Consensus       242 miElA~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  242 MIEMAILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             hhhhhhccccccccCCHHHHHHHHhcC
Confidence            9999999999975 4567777777644

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=293.69  Aligned_cols=278  Identities=20%  Similarity=0.245  Sum_probs=212.0

Q ss_pred             cchhhhhhccCCCCCCCc-----CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHH
Q 007046           21 SDHLRTAVATSNDTNAWI-----KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLL   92 (620)
Q Consensus        21 ~~~l~~~~~~s~~~~~~I-----~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~   92 (620)
                      ..|+|.....+|...+-+     -.++|-+++.||+|||+.||+|.+.      ...+.||+|+-+..+....   ....
T Consensus       438 nlHiRELKRi~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl------~EqRYvAvKIHqlNK~WrdEKKeNYh  511 (775)
T KOG1151|consen  438 NLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDL------TEQRYVAVKIHQLNKNWRDEKKENYH  511 (775)
T ss_pred             HHHHHHHHhhcccchhhhccCcchHHHHHHHHHhccccHHHHHHhccc------chhheeeEeeehhccchhhHhhhhHH
Confidence            345666666666655543     3478999999999999999999854      4457899998654333221   1111


Q ss_pred             HHHH--HHHHHccCCCceeEeEEEEEE-CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--C
Q 007046           93 ERLN--DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--G  167 (620)
Q Consensus        93 ~~~~--~~~l~~~~h~nIv~l~g~~~~-~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~--g  167 (620)
                      ....  -.+.+.++||.||+++++|.. .+.+|-|+|||+|+-+|++.. .+..+++.++..|+.||+.||.||...  .
T Consensus       512 KHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLK-QhklmSEKEARSIiMQiVnAL~YLNEikpP  590 (775)
T KOG1151|consen  512 KHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLK-QHKLMSEKEARSIIMQIVNALKYLNEIKPP  590 (775)
T ss_pred             HHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHH-hhhhhhHHHHHHHHHHHHHHHHHHhccCCC
Confidence            1111  126677899999999999864 567999999999988888764 456789999999999999999999976  5


Q ss_pred             CeeecccCCcEEEcc---CCcEEEeccCCcccccCCCCC----CCCCCCcCCCCCCCCccccc-CCCCCCCCchhhHHHH
Q 007046          168 ILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGF  239 (620)
Q Consensus       168 IiHrDLKP~NILld~---~~~vkL~DFGla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~-~~~~~~~s~~sDVwSl  239 (620)
                      |||-||||.|||+-.   .|.+||.|||+++.+.+....    ........||.+|++||++. ++....++.++||||.
T Consensus       591 IIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  591 IIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             eeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEee
Confidence            999999999999953   478999999999998665432    12234568999999999985 4445578999999999


Q ss_pred             HHHHHHHHhCCCCCCCCC-HHHHHHH--HHhccC-CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          240 ACSIIEMLTGVQPRCGRS-VDEIYDA--VVRRQE-IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       240 Gvil~elltG~~Pf~~~~-~~ei~~~--i~~~~~-~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |||+|.++.|+.||.... ..++++.  |++... ..+..+-++.++++||++||++.-++|.+..++..
T Consensus       671 GVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  671 GVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             ehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            999999999999997643 3344432  333222 12233568999999999999999999998887764

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.6e-33  Score=282.24  Aligned_cols=260  Identities=21%  Similarity=0.273  Sum_probs=201.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HH-HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RM-RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ...|+++..||+|.||.||+|..+.++.  .....+|||.++.++.. .. ....+++  .+++-++|+||+.+..+|..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~--kr~k~yAiKkfk~~kd~tGiS~SAcREi--aL~REl~h~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTND--KRTKEYAIKKFKGEKDGTGISMSACREI--ALLRELKHPNVISLVKVFLS   98 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCc--ccchhhHHHHHhccCCCCCcCHHHHHHH--HHHHHhcCCcchhHHHHHhc
Confidence            3569999999999999999997665543  12347999999865432 11 2222222  35667899999999999887


Q ss_pred             -CCEEEEEEecCCCChHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC----CcEEEe
Q 007046          118 -NGKICIIMKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLG  189 (620)
Q Consensus       118 -~~~~~IVmE~~~GsLld~l~~~~---~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~----~~vkL~  189 (620)
                       +..+++++||++-+|...+...+   ...++...+..++.||+.|+.|||++=|+||||||.|||+..+    |.|||+
T Consensus        99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence             78899999999999998876543   2568999999999999999999999999999999999999877    899999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------DE  260 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~---------~e  260 (620)
                      |||+++.+.+.-.+.......+-|.+|.|||.+.+..  .|+.+.|+||.|||+.||+|-++.|.+...         .+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~--hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d  256 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGAR--HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD  256 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcccc--cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence            9999999866444444455667899999999998763  699999999999999999999888865421         12


Q ss_pred             HHHHHHhccCCCC---------CC--------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          261 IYDAVVRRQEIPP---------IP--------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       261 i~~~i~~~~~~~~---------~p--------------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.|.+--..|.         +|                          ..-++...+|+.++|++||.+|.++++.++
T Consensus       257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence            2333332111111         11                          112455789999999999999999999998

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-33  Score=258.70  Aligned_cols=250  Identities=22%  Similarity=0.314  Sum_probs=204.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +|.-.++||+|.||+||+|++..+.+      .||+|.++.+..+.  ....++++  -+++-++|.|||+++++...+.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~e------ivalkrvrlddddegvpssalrei--cllkelkhknivrl~dvlhsdk   74 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHE------IVALKRVRLDDDDEGVPSSALREI--CLLKELKHKNIVRLHDVLHSDK   74 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccc------eEEEEEEeccCCCCCCcHHHHHHH--HHHHHhhhcceeehhhhhccCc
Confidence            56778899999999999999877765      89999998655432  22333333  3667789999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ++-+|+|||..+|-.++.. .++.++.+.+..++.|++.||.|+|+++++||||||+|+||+.||..|++|||+++.+. 
T Consensus        75 kltlvfe~cdqdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafg-  152 (292)
T KOG0662|consen   75 KLTLVFEFCDQDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFG-  152 (292)
T ss_pred             eeEEeHHHhhHHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcC-
Confidence            9999999999888777765 56788999999999999999999999999999999999999999999999999998762 


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC-----
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~-----  273 (620)
                        .+....+..+-|.+|.+|.++-+.  .-|+...|+||.|||+.|+.. |++.|.+.+..+.+..|...-..+.     
T Consensus       153 --ipvrcysaevvtlwyrppdvlfga--kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp  228 (292)
T KOG0662|consen  153 --IPVRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP  228 (292)
T ss_pred             --CceEeeeceeeeeeccCcceeeee--ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence              123334455789999999998764  258889999999999999987 8888999998887777765333221     


Q ss_pred             -------------CC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 -------------IP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 -------------~p---------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                   +|         +.+...-+++++++|.-+|.+|.++++.++
T Consensus       229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence                         11         123344579999999999999999999887

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=4.6e-32  Score=284.94  Aligned_cols=261  Identities=23%  Similarity=0.330  Sum_probs=204.4

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .++..+...+++.+.||+|.||.||+|..+.        +.||||++....   .+.+..+.+..-+-.+.|+||++|++
T Consensus       203 sspl~~l~pl~l~eli~~Grfg~V~KaqL~~--------~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~  271 (534)
T KOG3653|consen  203 SSPLLELDPLQLLELIGRGRFGCVWKAQLDN--------RLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIG  271 (534)
T ss_pred             CcccccCCchhhHHHhhcCccceeehhhccC--------ceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhc
Confidence            3566778889999999999999999998643        579999996433   33344433322334678999999999


Q ss_pred             EEEECC----EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeecccCCcEE
Q 007046          114 ISVING----KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK---------GILVLNLKPFNFI  179 (620)
Q Consensus       114 ~~~~~~----~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~---------gIiHrDLKP~NIL  179 (620)
                      +-....    .++||+||.+ |+|.+++.   ...+++....+++..++.||+|||+.         .|+|||||..|||
T Consensus       272 ~ekr~t~~~~eywLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVL  348 (534)
T KOG3653|consen  272 AEKRGTADRMEYWLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVL  348 (534)
T ss_pred             hhccCCccccceeEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceE
Confidence            876555    7999999999 89998885   56899999999999999999999975         4999999999999


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCC---CCchhhHHHHHHHHHHHHhCCC-----
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQ-----  251 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~---~s~~sDVwSlGvil~elltG~~-----  251 (620)
                      +..++.+.|+|||+|..+.- ..........+||.+|||||++.+...-.   --.+.||||+|.+||||++...     
T Consensus       349 vK~DlTccIaDFGLAl~~~p-~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~  427 (534)
T KOG3653|consen  349 VKNDLTCCIADFGLALRLEP-GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPG  427 (534)
T ss_pred             EccCCcEEeeccceeEEecC-CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence            99999999999999988752 22333444578999999999997653321   1135799999999999998422     


Q ss_pred             -------CCC-----CCCHHHHHHHHHhccCCCCCCCCC-----CHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          252 -------PRC-----GRSVDEIYDAVVRRQEIPPIPSGL-----PPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       252 -------Pf~-----~~~~~ei~~~i~~~~~~~~~p~~~-----s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                             ||.     ..+.+++...++.++.+|.+|+..     ..-+.+.+..||..|++.|.|+.=+.+.+..
T Consensus       428 ~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~  502 (534)
T KOG3653|consen  428 PVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAE  502 (534)
T ss_pred             CCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHH
Confidence                   333     123457777788888888888543     4668899999999999999998766664444

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.98  E-value=1e-32  Score=283.79  Aligned_cols=253  Identities=19%  Similarity=0.228  Sum_probs=196.9

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC-C----ceeEeEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-E----GICWLQG  113 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h-~----nIv~l~g  113 (620)
                      ..++|.+...+|+|.||.|-++.++.++      ..||||+++...........+..  .+.+...+ |    -++.+.+
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~------~~vAlKIik~V~kYreAa~iEi~--vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETK------EHVALKIIKNVDKYREAALIEIE--VLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCC------ceehHHHHHHHHHHhhHHHHHHH--HHHHHHhcCCCCceEEEeeeh
Confidence            3678999999999999999999988774      47999999865544333332221  22222222 2    2788889


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-----------
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-----------  182 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-----------  182 (620)
                      +|...++.|||+|.+.-++.|.+......+++...+..++.||+++++|||+.+++|-||||+|||+-+           
T Consensus       159 wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  159 WFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             hhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCC
Confidence            999999999999999989999998767788999999999999999999999999999999999999832           


Q ss_pred             ---------CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 007046          183 ---------ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR  253 (620)
Q Consensus       183 ---------~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf  253 (620)
                               +-.|+|+|||.|+...      ...++.+.|..|.|||++.+-   +++..+||||+||||+|+.||...|
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~------e~hs~iVsTRHYRAPEViLgL---GwS~pCDvWSiGCIL~ElytG~~LF  309 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDH------EHHSTIVSTRHYRAPEVILGL---GWSQPCDVWSIGCILVELYTGETLF  309 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceec------cCcceeeeccccCCchheecc---CcCCccCceeeeeEEEEeeccceec
Confidence                     2358899999997642      233667889999999999765   7999999999999999999999999


Q ss_pred             CCCCHHH---HHHHHHhccCC-----------------CCCC-------------------------CCCCHHHHHHHHH
Q 007046          254 CGRSVDE---IYDAVVRRQEI-----------------PPIP-------------------------SGLPPAVENVLLG  288 (620)
Q Consensus       254 ~~~~~~e---i~~~i~~~~~~-----------------~~~p-------------------------~~~s~~l~~Li~~  288 (620)
                      ...+..+   +++.|.. ..+                 ...+                         +.-..++.+||++
T Consensus       310 qtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~  388 (415)
T KOG0671|consen  310 QTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR  388 (415)
T ss_pred             ccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence            8776544   3333321 000                 0000                         0112457799999


Q ss_pred             hhhcCcCCCCCHHHHHH-HHHh
Q 007046          289 CFEYDLRSRPLMTDILR-VFKS  309 (620)
Q Consensus       289 cL~~dP~~RPs~~eil~-~L~~  309 (620)
                      ||.+||++|+|+.|++. .|++
T Consensus       389 mL~fDP~~RiTl~EAL~HpFF~  410 (415)
T KOG0671|consen  389 MLEFDPARRITLREALSHPFFA  410 (415)
T ss_pred             HHccCccccccHHHHhcCHHhh
Confidence            99999999999999997 4443

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=8.6e-32  Score=281.05  Aligned_cols=257  Identities=21%  Similarity=0.311  Sum_probs=198.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      ..++.+.+.||+|.||+||+|.|++.        .||||++....+..+.   ++-+......++|+||..|++.-..+ 
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wrGe--------~VAVKiF~srdE~SWf---rEtEIYqTvmLRHENILgFIaaD~~~~  278 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWRGE--------DVAVKIFSSRDERSWF---RETEIYQTVMLRHENILGFIAADNKDN  278 (513)
T ss_pred             hheeEEEEEecCccccceeeccccCC--------ceEEEEecccchhhhh---hHHHHHHHHHhccchhhhhhhccccCC
Confidence            36799999999999999999998764        4999999654443333   33222234456899999988764432 


Q ss_pred             ---CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeecccCCcEEEccCCcE
Q 007046          119 ---GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       119 ---~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~--------gIiHrDLKP~NILld~~~~v  186 (620)
                         .++|||++|.+ |||.|++.+   ..++....++++..++.||+|||..        .|.|||||..|||+.+++.+
T Consensus       279 gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C  355 (513)
T KOG2052|consen  279 GSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  355 (513)
T ss_pred             CceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence               25999999999 999999964   6899999999999999999999964        49999999999999999999


Q ss_pred             EEeccCCcccccCCC-CCCCCCCCcCCCCCCCCcccccCCCCCC-CC--chhhHHHHHHHHHHHHh-----C-----CCC
Q 007046          187 VLGDVGIPHLLLGIP-LPSSDLPRRLGTPNYMAPEQWQPEVRGP-IS--FETDSWGFACSIIEMLT-----G-----VQP  252 (620)
Q Consensus       187 kL~DFGla~~~~~~~-~~~~~~~~~~GT~~YmAPE~~~~~~~~~-~s--~~sDVwSlGvil~ellt-----G-----~~P  252 (620)
                      .|+|+|||....... .-.-.....+||.+|||||++....... +.  ..+||||||.++||+..     |     ++|
T Consensus       356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P  435 (513)
T KOG2052|consen  356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP  435 (513)
T ss_pred             EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence            999999998775432 1222345679999999999997543221 11  35899999999999876     2     568


Q ss_pred             CCCC-----CHHHHHHHHHhccCCCCCCCCCC-----HHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          253 RCGR-----SVDEIYDAVVRRQEIPPIPSGLP-----PAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       253 f~~~-----~~~ei~~~i~~~~~~~~~p~~~s-----~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      |.+.     +.+++.+-+...+.+|.+|....     ..+..+++.||..||..|.++-.|.+.|.+.
T Consensus       436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l  503 (513)
T KOG2052|consen  436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL  503 (513)
T ss_pred             cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence            7643     34456665666677777776543     3466899999999999999998888766654

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=6.8e-31  Score=296.95  Aligned_cols=259  Identities=17%  Similarity=0.123  Sum_probs=169.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+.+..++|++.++||+|+||.||+|++..+..  ..+..||+|.+........ ...++.    .. ..+.++..+...
T Consensus       126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~--~~~~~vAvK~~~~~~~~e~-~~~e~l----~~-~~~~~~~~~~~~  197 (566)
T PLN03225        126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQS--KKEGKYVLKKATEYGAVEI-WMNERV----RR-ACPNSCADFVYG  197 (566)
T ss_pred             CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCcc--ccCcEEEEEEecccchhHH-HHHHHH----Hh-hchhhHHHHHHh
Confidence            455678899999999999999999999876621  2245899999865332111 111111    11 111111111111


Q ss_pred             ------EEECCEEEEEEecCC-CChHHHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCC
Q 007046          115 ------SVINGKICIIMKFYE-GSVGDRMAQLKGGK-------------------LSLSNVFRYAIDLAQGILQLHSKGI  168 (620)
Q Consensus       115 ------~~~~~~~~IVmE~~~-GsLld~l~~~~~~~-------------------l~~~~~~~i~~qIa~gL~yLHs~gI  168 (620)
                            +..+..++|||||++ ++|.+++.. ...+                   .....+..++.||+.||+|||+++|
T Consensus       198 ~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~-~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI  276 (566)
T PLN03225        198 FLEPVSSKKEDEYWLVWRYEGESTLADLMQS-KEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI  276 (566)
T ss_pred             hhcccccccCCceEEEEEecCCCcHHHHHHh-cCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE
Confidence                  244667999999998 566666543 1111                   1233456799999999999999999


Q ss_pred             eeecccCCcEEEcc-CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCC-------------------
Q 007046          169 LVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG-------------------  228 (620)
Q Consensus       169 iHrDLKP~NILld~-~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~-------------------  228 (620)
                      +||||||+|||++. ++.+||+|||+++.+...  ........+||+.|||||.+......                   
T Consensus       277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~--~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~  354 (566)
T PLN03225        277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVG--INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQL  354 (566)
T ss_pred             EeCcCCHHHEEEeCCCCcEEEEeCCCccccccc--cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccc
Confidence            99999999999986 579999999999865321  11223456899999999965322111                   


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC---------CCC----------CCCCCCHHHHHHHHHh
Q 007046          229 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------IPP----------IPSGLPPAVENVLLGC  289 (620)
Q Consensus       229 ~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~---------~~~----------~p~~~s~~l~~Li~~c  289 (620)
                      .++.++|||||||++|||+++..|+... .......+.....         .+.          +.........+||.+|
T Consensus       355 ~~~~k~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m  433 (566)
T PLN03225        355 NLPDRFDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM  433 (566)
T ss_pred             cCCCCcccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence            2344679999999999999987665422 1111111111000         000          0111234456899999


Q ss_pred             hhcCcCCCCCHHHHHH
Q 007046          290 FEYDLRSRPLMTDILR  305 (620)
Q Consensus       290 L~~dP~~RPs~~eil~  305 (620)
                      |++||++||++.++++
T Consensus       434 L~~dP~kR~ta~e~L~  449 (566)
T PLN03225        434 MRFKGRQRISAKAALA  449 (566)
T ss_pred             ccCCcccCCCHHHHhC
Confidence            9999999999999998

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=8.1e-32  Score=294.91  Aligned_cols=244  Identities=25%  Similarity=0.327  Sum_probs=184.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC--
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING--  119 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~--  119 (620)
                      .|...+.||+|+||.||+|+++.+++      .||||.+++.......+..-++.+ +++.++|+|||+++++-....  
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~------~vAvK~~~~~~~~r~~e~~~~Eie-ilkKLnh~NIVk~f~iee~~~~~   86 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGR------LVAVKTFNKESSLRPRERWCREIE-ILKKLNHPNIVKLFDIEETKFLG   86 (732)
T ss_pred             ceeehhhhcCCccceeeeeccccccc------chhHHhhhhhcccchHHHHHHHHH-HHHHcCchhhhhhcccCCccccC
Confidence            36667889999999999999887764      899999988665444444444443 556667999999999865433  


Q ss_pred             ----EEEEEEecCCC-ChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc--cCC--cEEEe
Q 007046          120 ----KICIIMKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EAD--RAVLG  189 (620)
Q Consensus       120 ----~~~IVmE~~~G-sLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld--~~~--~vkL~  189 (620)
                          ...+|||||.| +|...+.+-. ...|++.+.+.++.+++.||.|||.+||+||||||.||++-  .+|  .-||+
T Consensus        87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt  166 (732)
T KOG4250|consen   87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT  166 (732)
T ss_pred             cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence                46899999995 5555554321 25799999999999999999999999999999999999984  333  46899


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAV  265 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~----~~ei~~~i  265 (620)
                      |||.|+.+.+    ++.+....||+.|.+||....  ...|+..+|.|||||++|++.||..||....    ..++...+
T Consensus       167 DfG~Arel~d----~s~~~S~vGT~~YLhPel~E~--q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~  240 (732)
T KOG4250|consen  167 DFGAARELDD----NSLFTSLVGTEEYLHPELYER--QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHI  240 (732)
T ss_pred             cccccccCCC----CCeeeeecCchhhcChHHHhh--ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhh
Confidence            9999998865    346777899999999999863  2478899999999999999999999986432    22333333


Q ss_pred             HhccCC-------------------CCCCCCCCHHH----HHHHHHhhhcCcCCCC
Q 007046          266 VRRQEI-------------------PPIPSGLPPAV----ENVLLGCFEYDLRSRP  298 (620)
Q Consensus       266 ~~~~~~-------------------~~~p~~~s~~l----~~Li~~cL~~dP~~RP  298 (620)
                      ..+...                   .++|..+++.+    ...+..+|+-+|++|.
T Consensus       241 ~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  241 ITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             hccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            222111                   12344444443    4677788888999998

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=3.8e-30  Score=254.85  Aligned_cols=236  Identities=26%  Similarity=0.396  Sum_probs=189.2

Q ss_pred             CceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCCC-
Q 007046           53 PFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-  130 (620)
Q Consensus        53 ~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~G-  130 (620)
                      +||.||+|.+..++      +.+|+|++....... ...+..+. . .++.++|+||+++++++......+++|||+++ 
T Consensus         1 ~~g~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~e~-~-~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   72 (244)
T smart00220        1 SFGKVYLARDKKTG------KLVAIKVIKKEKIKKKRERILREI-S-ILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGG   72 (244)
T ss_pred             CceEEEEEEECCCC------cEEEEEEecccccccHHHHHHHHH-H-HHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCC
Confidence            68999999976544      479999998665443 23333332 2 44556999999999999999999999999996 


Q ss_pred             ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCc
Q 007046          131 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR  210 (620)
Q Consensus       131 sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~  210 (620)
                      ++.+.+..  ...++...+..++.+++.+|.|||+.+++|+||+|.||+++.++.++|+|||++......    ......
T Consensus        73 ~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~----~~~~~~  146 (244)
T smart00220       73 DLFDLLKK--RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG----GLLTTF  146 (244)
T ss_pred             CHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc----cccccc
Confidence            77776653  233899999999999999999999999999999999999999999999999998876432    133455


Q ss_pred             CCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhccCCCCCCCC-CCHHHHHHHHH
Q 007046          211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLG  288 (620)
Q Consensus       211 ~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~-~~~~ei~~~i~~~~~~~~~p~~-~s~~l~~Li~~  288 (620)
                      .+++.|++||.+.+   ..++.++|+||||+++|++++|..||.. .+...+.+.+............ ++.++.+++.+
T Consensus       147 ~~~~~~~~pE~~~~---~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  223 (244)
T smart00220      147 VGTPEYMAPEVLLG---KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRK  223 (244)
T ss_pred             cCCcCCCCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHH
Confidence            78999999999863   3578899999999999999999999987 5555555555433332222222 88999999999


Q ss_pred             hhhcCcCCCCCHHHHHH
Q 007046          289 CFEYDLRSRPLMTDILR  305 (620)
Q Consensus       289 cL~~dP~~RPs~~eil~  305 (620)
                      ||..+|++||++.++++
T Consensus       224 ~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      224 LLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HccCCchhccCHHHHhh
Confidence            99999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=6.6e-31  Score=315.54  Aligned_cols=241  Identities=24%  Similarity=0.308  Sum_probs=181.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .+...+.||+|+||.||+|++..++      ..||||.++........    + . ..++.++||||++++++|..++..
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~----~-~-~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNG------MQFVVKEINDVNSIPSS----E-I-ADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCC------cEEEEEEccCCccccHH----H-H-HHHhhCCCCCcceEEEEEEcCCCC
Confidence            4566778999999999999976554      47999998754332211    1 1 244567999999999999999999


Q ss_pred             EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          122 CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH---SKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       122 ~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH---s~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      |+||||++ |+|.+.+.     .+++..+..++.|++.||+|||   +.+|+||||||+||+++.++..++. ||.+...
T Consensus       759 ~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             EEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            99999998 56666653     3789999999999999999999   6699999999999999999888875 6655433


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh---c----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVVR---R----  268 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~--~ei~~~i~~---~----  268 (620)
                      .       ......||+.|||||++.+   ..++.++|||||||++|||+||+.||.....  ..+.+....   .    
T Consensus       833 ~-------~~~~~~~t~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  902 (968)
T PLN00113        833 C-------TDTKCFISSAYVAPETRET---KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLD  902 (968)
T ss_pred             c-------cCCCccccccccCcccccC---CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchh
Confidence            1       1123378999999999864   3688999999999999999999999853211  111111100   0    


Q ss_pred             -cCCCCC------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          269 -QEIPPI------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       269 -~~~~~~------p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                       ...+.+      +.....++.+++.+||+.||++||++.++++.|+..
T Consensus       903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~  951 (968)
T PLN00113        903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA  951 (968)
T ss_pred             heeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence             001111      111233577899999999999999999999988875

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=8.8e-30  Score=282.44  Aligned_cols=268  Identities=14%  Similarity=0.126  Sum_probs=181.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCc----------CCCcceEEEEEEecCCchhHHHHHHHH-----------
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTE----------DCDEYHEVAVKILHPVKEDRMRVLLER-----------   94 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~e----------d~~~~~~VAIK~l~~~~~~~~~~~~~~-----------   94 (620)
                      +.+..++|++.++||+|+||.||+|.+..++.          +...++.||||.++.........+.++           
T Consensus       140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~  219 (507)
T PLN03224        140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG  219 (507)
T ss_pred             CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence            34678999999999999999999998644321          123456899999975443222222210           


Q ss_pred             -HHHHHHHccCCCc-----eeEeEEEEEE--------CCEEEEEEecCC-CChHHHHHHhc-------------------
Q 007046           95 -LNDLFLKCQGVEG-----ICWLQGISVI--------NGKICIIMKFYE-GSVGDRMAQLK-------------------  140 (620)
Q Consensus        95 -~~~~~l~~~~h~n-----Iv~l~g~~~~--------~~~~~IVmE~~~-GsLld~l~~~~-------------------  140 (620)
                       .+..++..++|.+     +++++++|..        .+..||||||++ |+|.+++....                   
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~  299 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD  299 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence             1112233333433     4667777653        356899999999 56666654211                   


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCC
Q 007046          141 ---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM  217 (620)
Q Consensus       141 ---~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~Ym  217 (620)
                         ...+++..+..++.|++.+|.|||+.+|+||||||+|||++.++.+||+|||+++......  ........+|+.|+
T Consensus       300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~--~~~~~~g~~tp~Y~  377 (507)
T PLN03224        300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI--NFNPLYGMLDPRYS  377 (507)
T ss_pred             hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC--ccCccccCCCccee
Confidence               1234567888999999999999999999999999999999999999999999987543211  11112234589999


Q ss_pred             CcccccCCCCC-------------------CCCchhhHHHHHHHHHHHHhCCC-CCCCCCHH-----------HHHHHHH
Q 007046          218 APEQWQPEVRG-------------------PISFETDSWGFACSIIEMLTGVQ-PRCGRSVD-----------EIYDAVV  266 (620)
Q Consensus       218 APE~~~~~~~~-------------------~~s~~sDVwSlGvil~elltG~~-Pf~~~~~~-----------ei~~~i~  266 (620)
                      |||.+......                   ....+.|+||+||++|+|++|.. ||......           .....+.
T Consensus       378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~  457 (507)
T PLN03224        378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK  457 (507)
T ss_pred             ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc
Confidence            99997532111                   01224799999999999999875 77542111           1111111


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCc---CCCCCHHHHHH
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDL---RSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP---~~RPs~~eil~  305 (620)
                      ............++..++|+.+||..+|   .+|+|++|+|+
T Consensus       458 ~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        458 GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            1222223345678999999999999866   68999999997

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.3e-32  Score=268.92  Aligned_cols=260  Identities=20%  Similarity=0.250  Sum_probs=203.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      +..+..+.|.-..+||+|.||.||+|+...+++      .||+|++--+.+  .--...+++.  .++.+++|+|++.++
T Consensus        11 P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~k------kvalkkvlmeneKeGfpitalrei--kiL~~lkHenv~nli   82 (376)
T KOG0669|consen   11 PFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGK------KVALKKVLMENEKEGFPITALREI--KILQLLKHENVVNLI   82 (376)
T ss_pred             CceecchHHHHHHhcCCchHHHHHHHhhcCccc------hhHHHHHHHhccccCCcHHHHHHH--HHHHHhcchhHHHHH
Confidence            445667788889999999999999999776654      688887532211  1112222222  366778999999998


Q ss_pred             EEEEE--------CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC
Q 007046          113 GISVI--------NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       113 g~~~~--------~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~  184 (620)
                      ++|..        ...+|+||++|+.+|..++.. ...++++.++.+++.+++.||.|+|++.|+|||+||+|+||+.+|
T Consensus        83 Eic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg  161 (376)
T KOG0669|consen   83 EICRTKATPTNRDRATFYLVFDFCEHDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG  161 (376)
T ss_pred             HHHhhccCCcccccceeeeeHHHhhhhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc
Confidence            88754        235899999999988888764 457899999999999999999999999999999999999999999


Q ss_pred             cEEEeccCCcccccCCC-CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIP-LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~-~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      .+||+|||+++.+.... ......+.++-|.+|.+||.+.+.  ..|+.+.|+|+.|||+.||.|+.+-+.+.+..+.+.
T Consensus       162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~--r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~  239 (376)
T KOG0669|consen  162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD--REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLH  239 (376)
T ss_pred             eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcc--cccCCcchhHhHHHHHHHHHccCccccCChHHHHHH
Confidence            99999999998775322 222335567789999999999864  368899999999999999999999999988776666


Q ss_pred             HHHhccC--C------------------CCCCC-------------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQE--I------------------PPIPS-------------GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~--~------------------~~~p~-------------~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .|..--.  .                  ++++.             .-.++..+|+.++|..||++|+++.++++
T Consensus       240 ~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  240 LISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             HHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            5543110  0                  11111             12457889999999999999999999997

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-31  Score=293.09  Aligned_cols=244  Identities=22%  Similarity=0.230  Sum_probs=187.7

Q ss_pred             EEeeeeccCceE-EEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEE
Q 007046           45 LRHRIGRGPFGE-VWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICI  123 (620)
Q Consensus        45 i~~~IG~G~fG~-Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~I  123 (620)
                      -.+.+|.|+-|+ ||+|..        .+++||||.+-.+.    ..+..++...+..+-.||||+++++.-.+....||
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~y--------e~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YI  580 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVY--------EGREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYI  580 (903)
T ss_pred             cHHHcccCCCCcEEEEEee--------CCceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEE
Confidence            345688999875 899974        45789999985333    33445555567788899999999999888999999


Q ss_pred             EEecCCCChHHHHHHh-cC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---C--CcEEEeccCCccc
Q 007046          124 IMKFYEGSVGDRMAQL-KG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---A--DRAVLGDVGIPHL  196 (620)
Q Consensus       124 VmE~~~GsLld~l~~~-~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~--~~vkL~DFGla~~  196 (620)
                      +.|+|..+|.|++... .. .....-..+.++.|++.||++||+.+|+||||||.||||+.   +  .+++|+|||+++.
T Consensus       581 alELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  581 ALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             EehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            9999999999998752 11 11122456788999999999999999999999999999976   2  4789999999999


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC-CC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP-PI  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~-~~  274 (620)
                      +......-....+..||-+|+|||++...   .-+.++|||||||++|+.++ |..||...-..+  ..|..+.... .+
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L  735 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHL  735 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhcc---ccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeee
Confidence            87655444456677899999999999754   34558999999999999999 589997644332  1233333221 11


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......++.+||.+|+.++|..||++.+++.
T Consensus       736 ~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  736 EPLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             ccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            1111228999999999999999999999987

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=281.71  Aligned_cols=254  Identities=22%  Similarity=0.292  Sum_probs=211.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|.+++++|.|+||.||||+++.+++      ..|+|+++.+..+......+++  .+++--+|+||+.+++.+...+
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~e------laavkvVkLep~dd~~~iqqei--~~~~dc~h~nivay~gsylr~d   85 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGE------LAAVKVVKLEPGDDFSGIQQEI--GMLRDCRHPNIVAYFGSYLRRD   85 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCc------hhhheeeeccCCccccccccce--eeeecCCCcChHHHHhhhhhhc
Confidence            5789999999999999999999887775      7999999887776655555543  2445558999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .++|.||||.|+.++.+.+ -.+++++.++...+++.+.||+|||+.|-+|||||-.|||+++.|.+|++|||.+-.+..
T Consensus        86 klwicMEycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita  164 (829)
T KOG0576|consen   86 KLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA  164 (829)
T ss_pred             CcEEEEEecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh
Confidence            9999999999655555543 468899999999999999999999999999999999999999999999999998876532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC---CCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---IPS  276 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~---~p~  276 (620)
                         .-.....+.|||.|||||+..-+..+.|...+|+|++|++..|+---++|-....+...+....+....++   -+.
T Consensus       165 ---ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~  241 (829)
T KOG0576|consen  165 ---TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKT  241 (829)
T ss_pred             ---hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCc
Confidence               22334567999999999998766678899999999999999999998888777777766665554443332   234


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..++.+.+|++.||.++|++||+++.++.
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            67899999999999999999999876653

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=6.9e-28  Score=247.89  Aligned_cols=265  Identities=16%  Similarity=0.229  Sum_probs=207.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..+++++...+-+|.||.||.|.++... ++-+.+.|-+|.++....+-+...+-.+ ..++.-..|+|+..+.+++.
T Consensus       280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEd-t~n~~q~v~vKTvk~~AS~iQv~~~L~e-s~lly~~sH~nll~V~~V~i  357 (563)
T KOG1024|consen  280 TVQRCRVRLSCLLQEGTFGRIYRGIWREED-TYNDCQEVLVKTVKQHASQIQVNLLLQE-SMLLYGASHPNLLSVLGVSI  357 (563)
T ss_pred             hhhhhheechhhhhcCchhheeeeeecccC-CcchHHHHHHHHHHhcccHHHHHHHHHH-HHHHhcCcCCCccceeEEEe
Confidence            366788999999999999999999987443 3445567888888765443322222222 23555667999999999987


Q ss_pred             EC-CEEEEEEecCC-CChHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          117 IN-GKICIIMKFYE-GSVGDRMAQLKG------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       117 ~~-~~~~IVmE~~~-GsLld~l~~~~~------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      .+ ...+.++.++. |+|-.++..-++      +.++..+...++.|++.|++|||+.++||.||..+|.+||+.-++||
T Consensus       358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence            64 56788888888 777666652221      34666778889999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|=.++|-+.-.+. ...-....-...||+||.+..+   .|+.++|+||||+++|||+| |+.||...++.++...+.+
T Consensus       438 tDsaLSRDLFP~DY-hcLGDnEnRPvkWMslEal~n~---~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd  513 (563)
T KOG1024|consen  438 TDSALSRDLFPGDY-HCLGDNENRPVKWMSLEALQNS---HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD  513 (563)
T ss_pred             ccchhccccCcccc-cccCCCCCCcccccCHHHHhhh---hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence            99999986632111 0001112235689999999755   69999999999999999999 9999999999999988876


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +. +...|.+||+++..++.-||+..|++||+++++..-|.
T Consensus       514 Gy-RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  514 GY-RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             cc-eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            65 45569999999999999999999999999999987554

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.7e-30  Score=251.09  Aligned_cols=250  Identities=18%  Similarity=0.246  Sum_probs=191.0

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      .+..+-||-|+||.||.+++      ...++.||+|++......-  -..++.+.  .++...+|.|+...+++..-.. 
T Consensus        55 i~PDRPIGYGAFGVVWsVTD------PRdgrrvalkK~pnvfq~L~s~krvFre~--kmLcfFkHdNVLSaLDILQPph~  126 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTD------PRSGKRVALKKMPNVFQNLASCKRVFREI--KMLSSFRHDNVLSLLDILQPANP  126 (449)
T ss_pred             CCCCCcccccceeEEEeccC------CCCccchhHhhcchHHHHHHHHHHHHHHH--HHHHhhccccHHHHHHhcCCCCc
Confidence            33446899999999999984      4455789999986533221  12222222  3667779999998888765432 


Q ss_pred             ----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          120 ----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       120 ----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                          .+|.++|++..+|-..+.  ....++.+.+.-+++||+.||.|||+.+|+||||||.|+|+++|...||||||+++
T Consensus       127 dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLAR  204 (449)
T KOG0664|consen  127 SFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLAR  204 (449)
T ss_pred             hHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccc
Confidence                368889999876655554  45789999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--  273 (620)
                      ....  .....++..+-|..|.|||++.+..  .|+.+.||||.|||+.|++..+..|...++-+.++.|.+--..|.  
T Consensus       205 vee~--d~~~hMTqEVVTQYYRAPEiLMGaR--hYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E  280 (449)
T KOG0664|consen  205 TWDQ--RDRLNMTHEVVTQYYRAPELLMGAR--RYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE  280 (449)
T ss_pred             ccch--hhhhhhHHHHHHHHhccHHHhhcch--hhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence            7532  2334556667899999999998753  599999999999999999999999988877766666554222221  


Q ss_pred             ----------------------CC--------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          274 ----------------------IP--------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       274 ----------------------~p--------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                                            ++        ..-..+...++..+|..||+.|.+.++.+..
T Consensus       281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence                                  11        1223456678888999999999999888763

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.3e-29  Score=272.58  Aligned_cols=350  Identities=22%  Similarity=0.258  Sum_probs=259.7

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      .+|+|+||.|+++.-..   ..+.++.+|+|++++..... .......+..++.....|+.+++++..++.+.+.+++++
T Consensus         1 vlg~g~~gkvfLvrk~~---g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld   77 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAG---GADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD   77 (612)
T ss_pred             CCCcCCCcchHHHHHhc---cccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhh
Confidence            37999999999986332   23577899999998654321 111112223334445569999999999999999999999


Q ss_pred             cCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCC
Q 007046          127 FYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS  205 (620)
Q Consensus       127 ~~~GsLld~l~~~-~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~  205 (620)
                      +..|  .+++.+. ....+.+.....+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++.......   
T Consensus        78 ~~rg--g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---  152 (612)
T KOG0603|consen   78 FLRG--GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---  152 (612)
T ss_pred             hccc--chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh---
Confidence            9996  3333333 346678888999999999999999999999999999999999999999999999998754221   


Q ss_pred             CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHH
Q 007046          206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV  285 (620)
Q Consensus       206 ~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~L  285 (620)
                          .|||..|||||+++     ....++|+||||++++||+||..||.+    ++...|.+.  .+.+|..++..++++
T Consensus       153 ----~cgt~eymApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~--~~~~p~~l~~~a~~~  217 (612)
T KOG0603|consen  153 ----ACGTYEYRAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA--ELEMPRELSAEARSL  217 (612)
T ss_pred             ----cccchhhhhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh--ccCCchhhhHHHHHH
Confidence                19999999999986     356689999999999999999999987    666666543  345788999999999


Q ss_pred             HHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCCcccccccccccCCCcccccCCCCCCCCCCCC
Q 007046          286 LLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENM  359 (620)
Q Consensus       286 i~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~p~~~~~p~~~  359 (620)
                      +..++..+|..|...     .++++ .+...++|.....+..++++++....-   .+...++...++..|..++.-.. 
T Consensus       218 ~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e---~~~~~fd~eft~~~P~dsp~~~~-  293 (612)
T KOG0603|consen  218 FRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITE---RDVAQFDPEFTSQVPADSPLLSA-  293 (612)
T ss_pred             HHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccch---hhhhhcCchhccCCcccCCCCCC-
Confidence            999999999999854     45554 677788999999999999988875443   45556666666666655432110 


Q ss_pred             CCCCCccccccCCCCCCceEEEeecCCCCCcccccccccceecccccCceEecccccCCCCceeeeEEeecCCcEEEEEe
Q 007046          360 DVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFL  439 (620)
Q Consensus       360 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~s~le~~~~g~~~~~~v~~~~~~~~~~~~~~v~~i~~~~~~~~~~~  439 (620)
                       .+.+.             .+             .+....|..|+     +.  +              ..+-.+...|.
T Consensus       294 -~~s~~-------------~i-------------f~g~sfva~~i-----l~--~--------------~~~~~~~~~y~  325 (612)
T KOG0603|consen  294 -SGSDH-------------TI-------------FSGPSFVAPGV-----LE--D--------------AVTAPFTESYE  325 (612)
T ss_pred             -Ccccc-------------ch-------------hcCCCccChHH-----hh--c--------------cccCCcchhhc
Confidence             00000             00             01111222233     11  1              11224667888


Q ss_pred             eccccccccCcccccccccccccEEEeeecccc
Q 007046          440 GLETLWKGHFSELQMAESYCVGQFVRLKANVVS  472 (620)
Q Consensus       440 ~~~~~w~g~~s~~~~~~~~~~g~~v~~k~~~~~  472 (620)
                      ..+.++.|+||.|+.|++...+|..+||.-=.+
T Consensus       326 ~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~  358 (612)
T KOG0603|consen  326 FREELGEGSFSAVKYCESSPTDQEPAVKIISKR  358 (612)
T ss_pred             cccccCCCCccceeeeeccccccchhheecccc
Confidence            888899999999999999999999999985444

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=6.5e-28  Score=233.32  Aligned_cols=250  Identities=20%  Similarity=0.354  Sum_probs=190.5

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .|=+.++|++.+++|+|-|+.||.|.+..+++      .++||++++.+..+.    .++..++..+..|+||++++++.
T Consensus        33 ~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~e------K~ViKiLKPVkkkKI----kREikIL~nL~gg~NIi~L~DiV  102 (338)
T KOG0668|consen   33 DWGNQDDYEIVRKVGRGKYSEVFEGINITNNE------KCVIKILKPVKKKKI----KREIKILQNLRGGPNIIKLLDIV  102 (338)
T ss_pred             eccccchHHHHHHHcCccHhhHhcccccCCCc------eEEEeeechHHHHHH----HHHHHHHHhccCCCCeeehhhhh
Confidence            34567899999999999999999999776665      799999987664433    33444566667899999999998


Q ss_pred             EEC--CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEeccC
Q 007046          116 VIN--GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVG  192 (620)
Q Consensus       116 ~~~--~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~DFG  192 (620)
                      .+.  ....+|+||+...-...+-    ..++.-++..++.|++.||.|+|++||+|||+||.|++||.. -..+|+|+|
T Consensus       103 ~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWG  178 (338)
T KOG0668|consen  103 KDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWG  178 (338)
T ss_pred             cCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecc
Confidence            764  3478999999863333332    467888999999999999999999999999999999999965 568999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHh----
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDEIYDAVVR----  267 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~-~~~~~ei~~~i~~----  267 (620)
                      +|.++.    +......++.+..|--||.+..  ...|++.-|+|||||++..|+.-+.||. |.+..+.+-+|.+    
T Consensus       179 LAEFYH----p~~eYnVRVASRyfKGPELLVd--y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt  252 (338)
T KOG0668|consen  179 LAEFYH----PGKEYNVRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGT  252 (338)
T ss_pred             hHhhcC----CCceeeeeeehhhcCCchheee--chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhCh
Confidence            998774    2333344567778889999863  3358889999999999999999888864 4433222222211    


Q ss_pred             ---------ccC--CCC----------------C---CC-CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 ---------RQE--IPP----------------I---PS-GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ---------~~~--~~~----------------~---p~-~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                               -..  .|.                +   .. -.++++.+|+.++|.+|-.+|+|++|.+.
T Consensus       253 ~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  253 DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence                     000  000                0   01 23699999999999999999999999986

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=3.4e-28  Score=257.23  Aligned_cols=252  Identities=21%  Similarity=0.301  Sum_probs=194.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc-----CCCceeEeE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ-----GVEGICWLQ  112 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~-----~h~nIv~l~  112 (620)
                      +--++|.+....|+|-|++|.+|.+...+      ++||||+|+....-. ..-+.++ +++.++.     +--|+++|+
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~------~~vAiKIIRnNE~M~-KtGl~El-eiLkKL~~AD~Edk~Hclrl~  500 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARG------QEVAIKIIRNNEVMH-KTGLKEL-EILKKLNDADPEDKFHCLRLF  500 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCC------CeeEEEEeecchHHh-hhhhHHH-HHHHHhhccCchhhhHHHHHH
Confidence            33467899999999999999999865443      489999997533211 1112222 2222222     123577888


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEec
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGD  190 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~~-~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~D  190 (620)
                      -.|...+++|||+|-+.-+|.+.+... ++..|....+..|+.||..||..|-..||+|.||||+|||+++. ..+||||
T Consensus       501 r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD  580 (752)
T KOG0670|consen  501 RHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD  580 (752)
T ss_pred             HHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence            888889999999999999999988765 34568899999999999999999999999999999999999976 5679999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||.|.....     ...+.++-+..|.|||++.|.   +|++..|+||.||+||||.||+..|.|.+..+++........
T Consensus       581 fGSA~~~~e-----neitPYLVSRFYRaPEIiLG~---~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG  652 (752)
T KOG0670|consen  581 FGSASFASE-----NEITPYLVSRFYRAPEIILGL---PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG  652 (752)
T ss_pred             Ccccccccc-----ccccHHHHHHhccCcceeecC---cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence            999876633     344455667789999999866   799999999999999999999999999888777655443222


Q ss_pred             CCC-------------C---------------------------C-----------CCC-------CHHHHHHHHHhhhc
Q 007046          271 IPP-------------I---------------------------P-----------SGL-------PPAVENVLLGCFEY  292 (620)
Q Consensus       271 ~~~-------------~---------------------------p-----------~~~-------s~~l~~Li~~cL~~  292 (620)
                      ..+             +                           |           ..+       -..+.+|+.+||..
T Consensus       653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L  732 (752)
T KOG0670|consen  653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL  732 (752)
T ss_pred             CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence            111             0                           0           001       24577999999999


Q ss_pred             CcCCCCCHHHHHH
Q 007046          293 DLRSRPLMTDILR  305 (620)
Q Consensus       293 dP~~RPs~~eil~  305 (620)
                      ||++|.+..+.|.
T Consensus       733 dP~KRit~nqAL~  745 (752)
T KOG0670|consen  733 DPEKRITVNQALK  745 (752)
T ss_pred             ChhhcCCHHHHhc
Confidence            9999999999886

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=9.2e-28  Score=256.82  Aligned_cols=202  Identities=21%  Similarity=0.220  Sum_probs=164.6

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHH-----HHHHHHH--HHHccCCCcee
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVL-----LERLNDL--FLKCQGVEGIC  109 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~-----~~~~~~~--~l~~~~h~nIv  109 (620)
                      +..+|..++.+|+|+||.|++|+++...      .+|+||++.++..  +.+-+-     .-.+.++  .+....|+||+
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~------~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIl  632 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENN------YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENIL  632 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccc------eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchh
Confidence            3467999999999999999999987654      5899999976432  111100     0011112  23334599999


Q ss_pred             EeEEEEEECCEEEEEEecCC-C-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          110 WLQGISVINGKICIIMKFYE-G-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~-G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      +++++|++++++||+||-.. | +|.|++.  .+..+++.++..|+.|++.|+++||+.||+|||||-+|+.++.+|.+|
T Consensus       633 KlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  633 KLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             hhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEE
Confidence            99999999999999999986 4 6677766  457899999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      |+|||.+....     +..+..+.||..|.|||++.++.+  ....-|||+||++||.++.-..||..
T Consensus       711 lidfgsaa~~k-----sgpfd~f~gtv~~aapevl~g~~y--~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  711 LIDFGSAAYTK-----SGPFDVFVGTVDYAAPEVLGGEKY--LGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             Eeeccchhhhc-----CCCcceeeeeccccchhhhCCCcc--CCCcchhhhhhheeeEEEeccCCCcC
Confidence            99999987763     456778899999999999987632  34567999999999999999988853

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-27  Score=241.32  Aligned_cols=253  Identities=19%  Similarity=0.228  Sum_probs=195.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +...-+.+|.-++.+|.|.- .|-.|.+.-      .++.||+|.+.....+........-+..++.+..|+||++++.+
T Consensus        11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v------~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~   83 (369)
T KOG0665|consen   11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQV------LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNV   83 (369)
T ss_pred             cceeeeeeeeeecccCCCCc-eEEecchhh------ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeec
Confidence            44456778999999999998 676776443      44689999986553332222222222247788999999999999


Q ss_pred             EEECC------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVING------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~~------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      |.-..      ..|+|||++..++...+.    -.++-.++..++.|++.|+.|||+.||+||||||+||++..+..+||
T Consensus        84 ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi  159 (369)
T KOG0665|consen   84 FTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKI  159 (369)
T ss_pred             cCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheee
Confidence            87543      479999999998887775    24677888999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      .|||+|+...    .....+..+.|..|.|||++.+.   .+...+||||+||++.||++|+.-|.+.+.-+.+.++.+.
T Consensus       160 ~dfg~ar~e~----~~~~mtpyVvtRyyrapevil~~---~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~  232 (369)
T KOG0665|consen  160 LDFGLARTED----TDFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ  232 (369)
T ss_pred             ccchhhcccC----cccccCchhheeeccCchheecc---CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence            9999998642    12345667899999999999754   4889999999999999999999999887665444444332


Q ss_pred             cCCCC-----------------------------CCC-----------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPP-----------------------------IPS-----------GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~-----------------------------~p~-----------~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      -..+.                             +|+           .-+..+++++.+||-.||++|.+++++|+
T Consensus       233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            21111                             111           12355789999999999999999999998

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-27  Score=235.96  Aligned_cols=247  Identities=17%  Similarity=0.245  Sum_probs=183.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE-EEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG-ISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g-~~~~~~  119 (620)
                      +.|.+.+.||+|.||.+-+++|++++.      .+++|.++.... ....|.+++. .-..+..|.||+.-++ .|+..+
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t------~ivlKavp~p~t-t~~dF~rEfh-Y~~~Ls~H~hIi~tY~vaFqt~d   95 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKT------RIVLKAVPRPQT-TQADFVREFH-YSFFLSPHQHIIDTYEVAFQTSD   95 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCce------EEEeeccCcchh-hHHHHHHHhc-cceeeccchhhhHHHHHHhhcCc
Confidence            569999999999999999999998874      799999976543 2344444432 2234557889887665 467788


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc--CCcEEEeccCCccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~--~~~vkL~DFGla~~  196 (620)
                      .+.++|||++ |+|...+   ....+-+....+++.|+++||.|||+++++|||||.+||||-.  ..++||||||+.+.
T Consensus        96 ~YvF~qE~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k  172 (378)
T KOG1345|consen   96 AYVFVQEFAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK  172 (378)
T ss_pred             eEEEeeccCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence            9999999999 7666555   4467889999999999999999999999999999999999953  35899999998765


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhccC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRRQE  270 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e----i~~~i~~~~~  270 (620)
                      .      ........-+..|.+||.+.-...+  ...+.+|+|.||+++|.+|||++||......+    -+.+- .++.
T Consensus       173 ~------g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w-~~rk  245 (378)
T KOG1345|consen  173 V------GTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW-LKRK  245 (378)
T ss_pred             c------CceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH-hccc
Confidence            3      1222233456679999987543333  34577999999999999999999997432211    11111 2223


Q ss_pred             CCCCC---CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIP---SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p---~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..|   ..+++.+..+.++-|..+|++|--..+..+
T Consensus       246 ~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  246 NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             CccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            33334   567899999999999999999965555444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=7.2e-26  Score=217.91  Aligned_cols=212  Identities=30%  Similarity=0.482  Sum_probs=171.5

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecC
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY  128 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~  128 (620)
                      ||+|++|.||++....++      +.+++|++.............++. ..++...|++|+++++++......+++||++
T Consensus         1 l~~g~~~~v~~~~~~~~~------~~~~~K~~~~~~~~~~~~~~~~e~-~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDKKTG------KKVAIKIIKKEDSSSLLEELLREI-EILKKLNHPNIVKLYGVFEDENHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEecCCC------cEEEEEEeccccchhHHHHHHHHH-HHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence            689999999999875533      579999998765432122222222 2445567899999999999989999999999


Q ss_pred             C-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcccccCCCCCCCC
Q 007046          129 E-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLPSSD  206 (620)
Q Consensus       129 ~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~~~~~~~~~~~~  206 (620)
                      + +++.+++.. ....++...+..++.+++.+|.+||+.+++|+||+|.||+++. ++.++|+|||.+........   .
T Consensus        74 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~  149 (215)
T cd00180          74 EGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---L  149 (215)
T ss_pred             CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---h
Confidence            9 566666543 2247899999999999999999999999999999999999999 89999999999886633211   1


Q ss_pred             CCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHH
Q 007046          207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL  286 (620)
Q Consensus       207 ~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li  286 (620)
                      .....++..|++||.+...  ...+.++|+|+||+++++|                                 ..+.+++
T Consensus       150 ~~~~~~~~~~~~pe~~~~~--~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l  194 (215)
T cd00180         150 LKTIVGTPAYMAPEVLLGK--GYYSEKSDIWSLGVILYEL---------------------------------PELKDLI  194 (215)
T ss_pred             hhcccCCCCccChhHhccc--CCCCchhhhHHHHHHHHHH---------------------------------HHHHHHH
Confidence            3345688899999998642  2567899999999999999                                 6789999


Q ss_pred             HHhhhcCcCCCCCHHHHHHH
Q 007046          287 LGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       287 ~~cL~~dP~~RPs~~eil~~  306 (620)
                      .+|+..||++||++.++++.
T Consensus       195 ~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         195 RKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHhhCCcccCcCHHHHhhC
Confidence            99999999999999999863

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.94  E-value=7.7e-26  Score=222.52  Aligned_cols=213  Identities=27%  Similarity=0.357  Sum_probs=169.0

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      |++.+.||+|+||.||++.+..++      +.+|+|.+...... ....+..+ .. .+...+|+|++++++++......
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~e-~~-~~~~~~~~~i~~~~~~~~~~~~~   72 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTG------ELVAVKVLKKEKTEKQREEFLRE-IR-ILKKLKHPNIVKLYGVFEDPEPL   72 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCC------cEEEEEeeccccchHHHHHHHHH-HH-HHHhCCCCChhhheeeeecCCce
Confidence            577899999999999999976544      47999999876544 22223222 22 34555899999999999988999


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      ++++|++++ +|.+.+.... ..+++..+..++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||++......
T Consensus        73 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       73 YLVMEYCEGGDLFDYLRKKG-GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             EEEEeccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            999999997 7777665322 22899999999999999999999999999999999999999999999999998876432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhc
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG--RSVDEIYDAVVRR  268 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~--~~~~ei~~~i~~~  268 (620)
                      .  ........++..|++||.+.  ...+++.++|+|+||+++++|++|+.||..  .+..++.+.+..+
T Consensus       152 ~--~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      152 L--AALLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             c--cccccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence            1  01223457888999999984  234677899999999999999999999977  4444666666544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.4e-26  Score=239.79  Aligned_cols=137  Identities=21%  Similarity=0.337  Sum_probs=109.9

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc-------CCCce
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ-------GVEGI  108 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~-------~h~nI  108 (620)
                      -.+.-.+|.+.++||=|-|++||+|.+.+..      +.||+|+.+........ .+.++ .++.+..       +..+|
T Consensus        73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq~~------r~VAlKVvKSAqhYtEa-AlDEI-klL~~v~~~Dp~~~~~~~V  144 (590)
T KOG1290|consen   73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQNK------RYVALKVVKSAQHYTEA-ALDEI-KLLQQVREGDPNDPGKKCV  144 (590)
T ss_pred             ccccCceEEEEEeccccccceeEEEeeccCC------eEEEEEEEehhhHHHHH-HHHHH-HHHHHHHhcCCCCCCCcee
Confidence            3466689999999999999999999987665      58999999743322221 12221 1222221       23369


Q ss_pred             eEeEEEEEE----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEE
Q 007046          109 CWLQGISVI----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFIL  180 (620)
Q Consensus       109 v~l~g~~~~----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILl  180 (620)
                      |+|++.|..    +.++|+|+|++.-+|+.++.+.....++...+..|++||+.||.|||.+ ||||-||||+|||+
T Consensus       145 V~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  145 VQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             eeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence            999999987    3579999999999999999987778899999999999999999999975 99999999999999

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-25  Score=237.79  Aligned_cols=259  Identities=20%  Similarity=0.234  Sum_probs=196.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc---CCCceeEeEEEE-EE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ---GVEGICWLQGIS-VI  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~---~h~nIv~l~g~~-~~  117 (620)
                      +|++.++||+|+||.||+|.+....     ...+|+|+.......... .+..+..++..+.   ...+++.+++.+ ..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~-----~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~   92 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK-----NKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRST   92 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC-----CeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCC
Confidence            8999999999999999999976654     247999998765332221 2222222333332   346899999998 47


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-----CcEEEeccC
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-----DRAVLGDVG  192 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-----~~vkL~DFG  192 (620)
                      +...||||+++.-+|.++......+.++..++++++.|++.+|++||+.|++||||||.|+++...     ..++|.|||
T Consensus        93 ~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   93 EDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             CceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            788999999999999998876566899999999999999999999999999999999999999865     358999999


Q ss_pred             Ccc--cccCCCC----CCCC-CCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          193 IPH--LLLGIPL----PSSD-LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       193 la~--~~~~~~~----~~~~-~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      +++  .+.....    .... ...+.||..|+++..+.+.   ..+.+.|+||+++++.+++.|.+||.+.........+
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~---e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~  249 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI---EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF  249 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC---ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence            999  4332221    1111 2345699999999999755   5778999999999999999999999776533222222


Q ss_pred             Hh---ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          266 VR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       266 ~~---~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..   ...........+.++..+...+-..+..++|.+..+...|..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~  296 (322)
T KOG1164|consen  250 EKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD  296 (322)
T ss_pred             HHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence            22   211111334567888888888888999999999998886654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=5e-26  Score=230.52  Aligned_cols=257  Identities=19%  Similarity=0.244  Sum_probs=210.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |=--+|++.++||+|+||..+.|++..+++      .||||.-...+........-+   .+..+...++|...+.+..+
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne------~VAIKfEPrkS~APQLrdEYr---~YKlL~g~~GIP~vYYFGqe   95 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNE------PVAIKFEPRKSEAPQLRDEYR---TYKLLGGTEGIPQVYYFGQE   95 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCc------eEEEEeccccCCcchHHHHHH---HHHHHcCCCCCCceeeeccc
Confidence            444579999999999999999999877665      899999876554433222222   23444578999999999988


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-----cEEEeccC
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-----RAVLGDVG  192 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-----~vkL~DFG  192 (620)
                      +-+..||||++.-+|.|++.. ++.+|+..++..++.|++.-++|+|++.+|+|||||+|+||...+     .+.|+|||
T Consensus        96 G~~NiLVidLLGPSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG  174 (449)
T KOG1165|consen   96 GKYNILVIDLLGPSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG  174 (449)
T ss_pred             cchhhhhhhhhCcCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc
Confidence            889999999999999998875 889999999999999999999999999999999999999997543     58899999


Q ss_pred             CcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHH
Q 007046          193 IPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAV  265 (620)
Q Consensus       193 la~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---~~~ei~~~i  265 (620)
                      +|+.+-+....    .+......||.+||+-..+.+.   ..+.+.|+-|||-++++.|-|.+||.+.   +..+-+++|
T Consensus       175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr---EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI  251 (449)
T KOG1165|consen  175 MAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI  251 (449)
T ss_pred             chhhhcCccccccCccccccccccceeeeEeeccccc---hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence            99998654322    2333456799999999988765   5788999999999999999999999875   456788888


Q ss_pred             HhccCCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          266 VRRQEIPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       266 ~~~~~~~~---~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      .......+   +..++|.++..-+...-..+..+-|+++-+...|
T Consensus       252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf  296 (449)
T KOG1165|consen  252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLF  296 (449)
T ss_pred             ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence            76654433   4478999999999999999999999987665543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=9.8e-26  Score=219.81  Aligned_cols=259  Identities=19%  Similarity=0.250  Sum_probs=206.9

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....|-...|+++++||.|+||.+|+|....+++      +||||+-..........   .+..+...+....+|..+..
T Consensus         8 ~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge------~VAiK~Es~~a~hpqL~---yEskvY~iL~~g~GiP~i~~   78 (341)
T KOG1163|consen    8 LEELIVGGKYKLVRKIGSGSFGDIYLGISITSGE------EVAIKLESSKAKHPQLL---YESKVYRILQGGVGIPHIRH   78 (341)
T ss_pred             hhhheeccceEEEEeecCCchhheeeeeeccCCc------eEEEEeecccCCCcchh---HHHHHHHHhccCCCCchhhh
Confidence            3455777889999999999999999999887775      79999986554433322   23334445556677888888


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEEec
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGD  190 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL~D  190 (620)
                      ++....+-.+||+++.-+|.+++.- +...++..+++-++-|++.-++|+|.+++|||||||+|+|..-+   ..+.++|
T Consensus        79 y~~e~~ynvlVMdLLGPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LID  157 (341)
T KOG1163|consen   79 YGTEKDYNVLVMDLLGPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLID  157 (341)
T ss_pred             hccccccceeeeeccCccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEe
Confidence            8888889999999999888888864 77889999999999999999999999999999999999999643   5688999


Q ss_pred             cCCcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHH
Q 007046          191 VGIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYD  263 (620)
Q Consensus       191 FGla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~---~ei~~  263 (620)
                      ||+|+.+.+....    ...-....||.+|.+-..+.+.   ..+.+.|+-|+|.+|.++..|.+||.+...   .+-++
T Consensus       158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~---eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE  234 (341)
T KOG1163|consen  158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI---EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE  234 (341)
T ss_pred             ccchhhhccccccccCccccCCccceeeeehhhhhhhhh---hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence            9999988654322    2223345799999998877544   467789999999999999999999998654   45566


Q ss_pred             HHHhccCCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQEIP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~~~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +|.+.....   .+..++|.++...+..|-..-.++-|+..-+-+
T Consensus       235 kI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrq  279 (341)
T KOG1163|consen  235 KISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQ  279 (341)
T ss_pred             HHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHH
Confidence            676554332   245789999999999999999999999866554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=1.7e-26  Score=271.82  Aligned_cols=192  Identities=16%  Similarity=0.174  Sum_probs=138.7

Q ss_pred             ceeEeEEEE-------EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          107 GICWLQGIS-------VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       107 nIv~l~g~~-------~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      ||..++++|       ...+.++++|||++++|.+.+.. ....+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL  112 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV  112 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence            455555554       22346788899999999888863 3466999999999999999999999999999999999999


Q ss_pred             Ecc-------------------CCcEEEeccCCcccccCCCC-------------CCCCCCCcCCCCCCCCcccccCCCC
Q 007046          180 LNE-------------------ADRAVLGDVGIPHLLLGIPL-------------PSSDLPRRLGTPNYMAPEQWQPEVR  227 (620)
Q Consensus       180 ld~-------------------~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~~GT~~YmAPE~~~~~~~  227 (620)
                      |+.                   ++.+|++|||+++.......             ........+||+.|||||++.+.  
T Consensus       113 l~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--  190 (793)
T PLN00181        113 MSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGS--  190 (793)
T ss_pred             EcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccC--
Confidence            954                   44566667776654311000             00001124689999999998643  


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       228 ~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       .++.++|||||||+||||++|.+|+....  .....+......+. .....+...+++.+||.+||.+||++.++++
T Consensus       191 -~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        191 -SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLPPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             -CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcChh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence             68899999999999999999998875322  22222222222221 1123456778999999999999999999986

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.93  E-value=4.3e-25  Score=211.40  Aligned_cols=160  Identities=16%  Similarity=0.191  Sum_probs=126.2

Q ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCC
Q 007046          130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR  209 (620)
Q Consensus       130 GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~  209 (620)
                      |+|.+.+.. .+.++++..++.++.||+.||.|||+++      ||+|||++.++.+++  ||+++....        ..
T Consensus         1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~--------~~   63 (176)
T smart00750        1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP--------EQ   63 (176)
T ss_pred             CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc--------cc
Confidence            677777754 4567999999999999999999999998      999999999999999  999876532        12


Q ss_pred             cCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCC-----CCCCCCCH--H
Q 007046          210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIP-----PIPSGLPP--A  281 (620)
Q Consensus       210 ~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~~~-----~~p~~~s~--~  281 (620)
                      ..||+.|||||++.+.   .++.++|||||||++|||+||+.||..... ...+..+.......     ..+..++.  +
T Consensus        64 ~~g~~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (176)
T smart00750       64 SRVDPYFMAPEVIQGQ---SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARS  140 (176)
T ss_pred             CCCcccccChHHhcCC---CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhh
Confidence            2689999999999654   688899999999999999999999976543 23333333222111     11223333  6


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          282 VENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +.+++.+||..||++||++.++++.+..
T Consensus       141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      141 FADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            9999999999999999999999986543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=1.9e-25  Score=232.97  Aligned_cols=253  Identities=25%  Similarity=0.382  Sum_probs=185.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|++.++||+|.|++||+|++...   ....+.||+|.+...+...  ....+ .+.+.....+.||+++.+++..++.
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~---~~~~~~valk~i~~ts~p~--ri~~E-l~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQ---DTKRRYVALKAIYRTSSPS--RILNE-LEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhh---ccccceEeeeecccccCch--HHHHH-HHHHHHhccchhhhcchhhhccCCe
Confidence            4589999999999999999998652   1234689999997655432  22222 2245566789999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~DFGla~~~~~  199 (620)
                      .++||||++-.-...+..    .++..++..|+..++.||.++|.+|||||||||.|+|.+.. +.-.|.|||+|.....
T Consensus       110 v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             eEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            999999999543333332    46789999999999999999999999999999999999854 7788999999972210


Q ss_pred             CC--------------C----------------C-----------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHH
Q 007046          200 IP--------------L----------------P-----------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG  238 (620)
Q Consensus       200 ~~--------------~----------------~-----------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwS  238 (620)
                      ..              .                +           ......+.||++|.|||++..  .+..+.++|+||
T Consensus       186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k--~~~QttaiDiws  263 (418)
T KOG1167|consen  186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR--CPRQTTAIDIWS  263 (418)
T ss_pred             hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh--ccCcCCccceee
Confidence            00              0                0           000113469999999999863  345678999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCHH--------------HHHHHHH-hcc-------------------C--------------
Q 007046          239 FACSIIEMLTGVQPRCGRSVD--------------EIYDAVV-RRQ-------------------E--------------  270 (620)
Q Consensus       239 lGvil~elltG~~Pf~~~~~~--------------ei~~~i~-~~~-------------------~--------------  270 (620)
                      .|+|++-++++..||.....+              ++.+.-. .+.                   .              
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n  343 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN  343 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence            999999999999998643211              1100000 000                   0              


Q ss_pred             --CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 --IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 --~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        .....+..+..+.+|+.+||+.||.+|.++++.|+
T Consensus       344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             eeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence              00011234567889999999999999999999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.91  E-value=2.5e-22  Score=203.66  Aligned_cols=253  Identities=25%  Similarity=0.355  Sum_probs=191.1

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCC-ceeEeEEEEEECC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVE-GICWLQGISVING  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~-nIv~l~g~~~~~~  119 (620)
                      |.+.+.||.|+||.||++.+.         ..+|+|.+........  .....++.. ....+.|+ +++++.+++....
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~~~~~~~~~~   71 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---------KLVALKVLAKKLESKSKEVERFLREIQ-ILASLNHPPNIVKLYDFFQDEG   71 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---------cEEEEEeechhhccchhHHHHHHHHHH-HHHHccCCcceeeEEEEEecCC
Confidence            788999999999999999876         3689999987554332  222333332 34445555 8999999998777


Q ss_pred             EEEEEEecCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~--~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~~  196 (620)
                      ..+++++++.|..+..+.....  ..++......++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||+++.
T Consensus        72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~  151 (384)
T COG0515          72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKL  151 (384)
T ss_pred             EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence            8899999999644443332222  2789999999999999999999999999999999999999998 799999999986


Q ss_pred             ccCCCCCC---CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcc
Q 007046          197 LLGIPLPS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQ  269 (620)
Q Consensus       197 ~~~~~~~~---~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~~~~  269 (620)
                      +.......   .......||..|++||.+.+.....++...|+||+|++++++++|..||.....    ......+....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  231 (384)
T COG0515         152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP  231 (384)
T ss_pred             cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC
Confidence            54322211   134667899999999998642103577899999999999999999999877663    45555554433


Q ss_pred             CC---CCCCCCC----CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EI---PPIPSGL----PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~---~~~p~~~----s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..   .......    ...+.+++..|+..+|..|.+..+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         232 TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            22   1111222    257899999999999999999887665

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=1.4e-22  Score=216.55  Aligned_cols=173  Identities=18%  Similarity=0.105  Sum_probs=125.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc----hhHHHHHHHHHHHHHHHccCCCceeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK----EDRMRVLLERLNDLFLKCQGVEGICW  110 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~----~~~~~~~~~~~~~~~l~~~~h~nIv~  110 (620)
                      +...-.++|++.+.||+|+||+||+|.++.++.     +.||||++....    .......+.++. .+++.++|+|++.
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~E~-~iL~~L~h~~iv~   85 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPG-----TARAVRRRVSEVPWWSKPLARHLAAREI-RALKTVRGIGVVP   85 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCC-----eEEEEEEecccccccccHHHHHHHHHHH-HHHHhccCCCCCc
Confidence            344556789999999999999999999765332     468999875331    122233333333 3556678888874


Q ss_pred             -eEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecc-cCCcEEEccCCcEEE
Q 007046          111 -LQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNL-KPFNFILNEADRAVL  188 (620)
Q Consensus       111 -l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDL-KP~NILld~~~~vkL  188 (620)
                       ++++    +..||||||++|..+..+.  .   ..   ...++.|++.+|.|||++||+|||| ||+|||++.++.+||
T Consensus        86 ~l~~~----~~~~LVmE~~~G~~L~~~~--~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikL  153 (365)
T PRK09188         86 QLLAT----GKDGLVRGWTEGVPLHLAR--P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAV  153 (365)
T ss_pred             EEEEc----CCcEEEEEccCCCCHHHhC--c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEE
Confidence             5432    4689999999976554321  1   11   1467899999999999999999999 999999999999999


Q ss_pred             eccCCcccccCCCCC-----CCCCCCcCCCCCCCCcccccCC
Q 007046          189 GDVGIPHLLLGIPLP-----SSDLPRRLGTPNYMAPEQWQPE  225 (620)
Q Consensus       189 ~DFGla~~~~~~~~~-----~~~~~~~~GT~~YmAPE~~~~~  225 (620)
                      +|||+|+.+......     .......++++.|+|||.+..+
T Consensus       154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            999999977543211     1122466799999999998754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.3e-22  Score=199.06  Aligned_cols=254  Identities=22%  Similarity=0.282  Sum_probs=203.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-hhHH-HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRM-RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -|+.+++.+.-+|.+..-|..|+|+|....        +++|+++... .... +.|.+++  -.++...||||+.+++.
T Consensus       186 gid~~~lnl~tkl~e~hsgelwrgrwqgnd--------ivakil~vr~~t~risrdfneef--p~lrifshpnilpvlga  255 (448)
T KOG0195|consen  186 GIDVSSLNLITKLAESHSGELWRGRWQGND--------IVAKILNVREVTARISRDFNEEF--PALRIFSHPNILPVLGA  255 (448)
T ss_pred             CcchhhhhhhhhhccCCCcccccccccCcc--------hhhhhhhhhhcchhhcchhhhhC--cceeeecCCchhhhhhh
Confidence            377888899999999999999999987654        6778875322 1111 2222222  23566789999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEccCCcEEEe--
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLG--  189 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~~~~vkL~--  189 (620)
                      |.....+.++..||+ |+|+..+....+--++-.++.+++.+++.|++|||+..  |.---|....++||++..++|+  
T Consensus       256 cnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarisma  335 (448)
T KOG0195|consen  256 CNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMA  335 (448)
T ss_pred             ccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecc
Confidence            999999999999999 88888876544455678899999999999999999984  4445788899999998776653  


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |--++.          ......-+|.||+||.++.+.....-.++|+|||++++||+.|...||....+.+.-.+|.-..
T Consensus       336 d~kfsf----------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg  405 (448)
T KOG0195|consen  336 DTKFSF----------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG  405 (448)
T ss_pred             cceeee----------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc
Confidence            433322          1233456899999999986644444467999999999999999999999999999988888788


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..+|++++..+..|+.-|+..||.+||.+..|+-.|++.
T Consensus       406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            88999999999999999999999999999999998888764

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=3.2e-21  Score=199.48  Aligned_cols=277  Identities=19%  Similarity=0.241  Sum_probs=191.0

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCC-----------------------------CcceEEEEEEecCCc
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDC-----------------------------DEYHEVAVKILHPVK   84 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~-----------------------------~~~~~VAIK~l~~~~   84 (620)
                      ..+.+..++|++.+.||+|.-..||.|.....+.+.                             ...=+.|||++-...
T Consensus       150 ~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~  229 (598)
T KOG4158|consen  150 IDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFE  229 (598)
T ss_pred             hhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccc
Confidence            344466699999999999999999999875422111                             011245677654322


Q ss_pred             hh-HHHHHHHHHHH-H-----------------------HHHccCCCceeEeEEEEEE----------------------
Q 007046           85 ED-RMRVLLERLND-L-----------------------FLKCQGVEGICWLQGISVI----------------------  117 (620)
Q Consensus        85 ~~-~~~~~~~~~~~-~-----------------------~l~~~~h~nIv~l~g~~~~----------------------  117 (620)
                      .+ .....++.+-. .                       ...+..|||||+++.+|.+                      
T Consensus       230 ~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p  309 (598)
T KOG4158|consen  230 HDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYP  309 (598)
T ss_pred             cCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecc
Confidence            11 11111111100 0                       0123579999999988765                      


Q ss_pred             -----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc--cCC--cEEE
Q 007046          118 -----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EAD--RAVL  188 (620)
Q Consensus       118 -----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld--~~~--~vkL  188 (620)
                           +..+|+||..++.+|..++-   ....+.....-++.|+++|+.|||.+||.|||||.+|||+.  +++  ...|
T Consensus       310 ~g~g~~~tlylvMkrY~~tLr~yl~---~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVv  386 (598)
T KOG4158|consen  310 SGAGEPKTLYLVMKRYRQTLREYLW---TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVV  386 (598)
T ss_pred             cccCCCceEEEehhcchhhHHHHHh---cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEE
Confidence                 23479999999998888774   45567788888999999999999999999999999999994  333  5689


Q ss_pred             eccCCcccccCCCC---CCCCCCCcCCCCCCCCcccccCCCCCCCC----chhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 007046          189 GDVGIPHLLLGIPL---PSSDLPRRLGTPNYMAPEQWQPEVRGPIS----FETDSWGFACSIIEMLTGVQPRCGRSVDEI  261 (620)
Q Consensus       189 ~DFGla~~~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~~~~~s----~~sDVwSlGvil~elltG~~Pf~~~~~~ei  261 (620)
                      +|||.|---.....   ..+..-..-|.-.-||||+.... .|+..    .++|.|+.|.+.||+++-..||.+.....+
T Consensus       387 aDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~-PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L  465 (598)
T KOG4158|consen  387 ADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV-PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL  465 (598)
T ss_pred             cccceeeeccccccccccccccccCCCcceecchhhhhcC-CCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee
Confidence            99998743222111   11222234578889999998643 33321    478999999999999999999987544332


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHH---HHHH-HHHhCCCCC
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT---DILR-VFKSDGGWT  314 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~---eil~-~L~~~~~~~  314 (620)
                      -....+....|.+|+.+++.+++++..+|+.||++|++..   .+++ .|.....|.
T Consensus       466 ~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~v  522 (598)
T KOG4158|consen  466 DTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGEDV  522 (598)
T ss_pred             chhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchHH
Confidence            2222334567889999999999999999999999999854   4554 344444443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=4.2e-22  Score=225.63  Aligned_cols=253  Identities=19%  Similarity=0.170  Sum_probs=180.7

Q ss_pred             eEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHH--HHHHccCCCceeEeEEEEEECCEE
Q 007046           44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND--LFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        44 ~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~--~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .....+|.|+||.|+.+......+- .....+++| ..+  .............  .+-..+.|+|++.....+.+....
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~-~~~~~~r~~-~~~--~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~  396 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKS-FPEKEFRVR-VKP--TESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI  396 (601)
T ss_pred             CccceeeecccCceEEEEecCCCcc-chhhhhhcc-cCC--cccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence            5667899999998888876654431 111223333 211  1111222111111  144567899987766665555445


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCC
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP  201 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~  201 (620)
                      +-.||||+++|..++.  ..+.+...++..++.||+.|+.|||+.||.||||||+|+++..+|.+||+|||.+..+.-..
T Consensus       397 ~~~mE~~~~Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  397 LQSMEYCPYDLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             hhhhhcccHHHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            5559999997777775  33578999999999999999999999999999999999999999999999999987764321


Q ss_pred             C-CCCCCCCcCCCCCCCCcccccCCCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHh-----ccCCC
Q 007046          202 L-PSSDLPRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIY--DAVVR-----RQEIP  272 (620)
Q Consensus       202 ~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s-~~sDVwSlGvil~elltG~~Pf~~~~~~ei~--~~i~~-----~~~~~  272 (620)
                      . .......++|+..|+|||.+.+.   .|. ...||||.|++++.|.+|+.||.-....+..  +....     .....
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~---~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~  551 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGK---EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN  551 (601)
T ss_pred             chhhhhhcCcccCCcCcCccccccc---ccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence            1 11344567899999999999765   354 4579999999999999999999754333221  11100     11112


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+...++...+.+|.+||+.||.+|.++++|++
T Consensus       552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            234568899999999999999999999999997

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.83  E-value=1.2e-20  Score=194.20  Aligned_cols=237  Identities=20%  Similarity=0.249  Sum_probs=146.6

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccC---------CCcee
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQG---------VEGIC  109 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~---------h~nIv  109 (620)
                      .+...+.||.|+|+.||.+++..|++      .+|+|+......   .....+.++...+ ....+         |-.++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~------~~avkvf~~~~~~~~~~~~~~~~e~l~~-~~~~~~~~p~~a~~~~r~l   85 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGE------EFAVKVFLLPADASANEYEQLKEEQLAI-TLFPGVKNPKEAYRHLRFL   85 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTE------EEEEEEEEESSTTHTTHHHHHHHHHHGG-GGSTT--SHHHHHHHH-B-
T ss_pred             EEEEccccccCCceEEEEEEEccCCc------eEEEEEEecccccchHHHHHHHHHHHHh-hhhccCCCHHHHHHhceEE
Confidence            46778899999999999999877764      799998754332   2222222222111 01011         22233


Q ss_pred             EeEEEEEEC------------C-----EEEEEEecCCCChHHHHHHhcC---C--CCCHHHHHHHHHHHHHHHHHHHHCC
Q 007046          110 WLQGISVIN------------G-----KICIIMKFYEGSVGDRMAQLKG---G--KLSLSNVFRYAIDLAQGILQLHSKG  167 (620)
Q Consensus       110 ~l~g~~~~~------------~-----~~~IVmE~~~GsLld~l~~~~~---~--~l~~~~~~~i~~qIa~gL~yLHs~g  167 (620)
                      ..++.....            .     ..+++|+-+.++|.+.+.-+..   .  .+.....+.+..|++..+++||+.|
T Consensus        86 ~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G  165 (288)
T PF14531_consen   86 VPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG  165 (288)
T ss_dssp             --SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc
Confidence            333333221            1     1478899999999887654322   1  1223334555689999999999999


Q ss_pred             CeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC-----CCCCCCchhhHHHHHHH
Q 007046          168 ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-----VRGPISFETDSWGFACS  242 (620)
Q Consensus       168 IiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-----~~~~~s~~sDVwSlGvi  242 (620)
                      ++|+||||+|++++.+|.++|+||+.......      .......+..|.+||.....     ..-.++.+.|.|+||++
T Consensus       166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~  239 (288)
T PF14531_consen  166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT  239 (288)
T ss_dssp             EEEST-SGGGEEE-TTS-EEE--GGGEEETTE------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred             eEecccceeeEEEcCCCCEEEcChHHHeecCc------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence            99999999999999999999999987655421      11113455789999976432     12257889999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCC
Q 007046          243 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR  297 (620)
Q Consensus       243 l~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~R  297 (620)
                      +|.|.||..||...........     ...... ++|+.++.||..+|+.||.+|
T Consensus       240 ly~lWC~~lPf~~~~~~~~~~~-----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  240 LYSLWCGRLPFGLSSPEADPEW-----DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHSS-STCCCGGGSTSGG-----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHccCCCCCCCccccccc-----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999999999986644322111     111233 889999999999999999987

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.82  E-value=1.7e-20  Score=213.52  Aligned_cols=229  Identities=23%  Similarity=0.348  Sum_probs=167.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      --.++|..++.|-.|+||.||.++|+.+.      +.+|+|+ ++...     .++.    ++.....|.+|        
T Consensus        80 p~e~df~~IklisngAygavylvrh~~tr------qrfa~ki-Nkq~l-----ilRn----ilt~a~npfvv--------  135 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETR------QRFAMKI-NKQNL-----ILRN----ILTFAGNPFVV--------  135 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccc------cchhhcc-cccch-----hhhc----cccccCCccee--------
Confidence            34578999999999999999999987665      4688843 22110     0000    11112223222        


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                                  |+-.++++.  -++++...        +.+++|||+-||+|||+||+|.||..-|++|+.|||+.+..
T Consensus       136 ------------gDc~tllk~--~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 ------------GDCATLLKN--IGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             ------------chhhhhccc--CCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence                        554555542  23444322        78999999999999999999999999999999999998865


Q ss_pred             cCCCCCC------------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          198 LGIPLPS------------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       198 ~~~~~~~------------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      .......            -.....||||.|+|||++..+   .|...+|+|++|+|+||.+-|+.||.+.++++++..+
T Consensus       194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq---gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v  270 (1205)
T KOG0606|consen  194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV  270 (1205)
T ss_pred             hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhh---ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh
Confidence            3211100            011245899999999999743   6888999999999999999999999999999999887


Q ss_pred             Hhcc-CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHH---HHHH-HHHhCCCCCC
Q 007046          266 VRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT---DILR-VFKSDGGWTG  315 (620)
Q Consensus       266 ~~~~-~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~---eil~-~L~~~~~~~~  315 (620)
                      +... ..+.-...++++++++|.++|+.+|..|....   ++.+ .+....||..
T Consensus       271 isd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~  325 (1205)
T KOG0606|consen  271 ISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKS  325 (1205)
T ss_pred             hhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccch
Confidence            7543 34445677899999999999999999997433   3333 4556667763

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=6.2e-20  Score=179.84  Aligned_cols=140  Identities=20%  Similarity=0.128  Sum_probs=98.4

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH-------------------------HHHHHHHHHHH
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-------------------------VLLERLNDLFL  100 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~-------------------------~~~~~~~~~~l  100 (620)
                      ...||+|+||.||+|.+. +      ++.||||++++.......                         .....+.. .+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~------g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l   73 (190)
T cd05147           2 NGCISTGKEANVYHATTA-N------GEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMR-NL   73 (190)
T ss_pred             CCccccccceEEEEEECC-C------CCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHH-HH
Confidence            467999999999999864 3      358999999764321000                         01111222 33


Q ss_pred             HccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeecccCCcEE
Q 007046          101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL-HSKGILVLNLKPFNFI  179 (620)
Q Consensus       101 ~~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKP~NIL  179 (620)
                      ..+.++++.....+.. . ..+|||||++|+.+.... ....++++..+..++.|++.+|.|| |+.||+||||||+|||
T Consensus        74 ~~l~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIl  150 (190)
T cd05147          74 KRLVTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLL  150 (190)
T ss_pred             HHHHHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence            3334455433222222 2 238999999975443221 2456889999999999999999999 7999999999999999


Q ss_pred             EccCCcEEEeccCCcccc
Q 007046          180 LNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~  197 (620)
                      ++ ++.++|+|||+|...
T Consensus       151 i~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         151 YH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EE-CCcEEEEEccccccC
Confidence            98 588999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.80  E-value=2.9e-20  Score=211.53  Aligned_cols=243  Identities=17%  Similarity=0.172  Sum_probs=184.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +|...+.||++.|=+|.+|+++.       | .|+||++-+.. .-..+.+.++++++-..+.++||.+.+.-+...+..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-------G-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-------G-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-------c-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHH
Confidence            68888999999999999997532       2 49999975543 455666667766666777899999998888777778


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .|||-+|...+|+|++.  -..-+.+.+.+-|+.||+.||..+|..||+|+|||.+||||..-+-+.|+||..-+...-.
T Consensus        96 AylvRqyvkhnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHhhhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            89999999999999884  2344677788888999999999999999999999999999999999999999865543211


Q ss_pred             CCCCCCCCCc----CCCCCCCCcccccCCC--------CCCCCchhhHHHHHHHHHHHHh-CCCCCCC-----------C
Q 007046          201 PLPSSDLPRR----LGTPNYMAPEQWQPEV--------RGPISFETDSWGFACSIIEMLT-GVQPRCG-----------R  256 (620)
Q Consensus       201 ~~~~~~~~~~----~GT~~YmAPE~~~~~~--------~~~~s~~sDVwSlGvil~ellt-G~~Pf~~-----------~  256 (620)
                      ......+..+    .--..|+|||.+....        ....+++-||||+||++.||++ |++||.-           .
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~  253 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNAD  253 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCcc
Confidence            1112222222    2234699999885311        1126678899999999999998 8999842           1


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      +.+..++.|            -+..++.+|..|++.||++|.++++.|+.
T Consensus       254 ~~e~~Le~I------------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  254 DPEQLLEKI------------EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CHHHHHHhC------------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            122222222            13478999999999999999999999974

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.80  E-value=4.8e-19  Score=173.31  Aligned_cols=139  Identities=19%  Similarity=0.138  Sum_probs=101.5

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--H----------------------H-HHHHHHHHHHHH
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--R----------------------M-RVLLERLNDLFL  100 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~----------------------~-~~~~~~~~~~~l  100 (620)
                      ...||+|+||.||+|++. +      ++.||||++++....  .                      . ......+. ..+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~------g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l   73 (190)
T cd05145           2 NGCISTGKEANVYHARTG-D------GEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEF-RNL   73 (190)
T ss_pred             CceeecCCCcEEEEEEcC-C------CCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHH-HHH
Confidence            468999999999999864 3      358999999865311  0                      0 11111222 234


Q ss_pred             HccCCCceeEeEEEEEECCEEEEEEecCCCC-hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcE
Q 007046          101 KCQGVEGICWLQGISVINGKICIIMKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNF  178 (620)
Q Consensus       101 ~~~~h~nIv~l~g~~~~~~~~~IVmE~~~Gs-Lld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NI  178 (620)
                      ..+.++++.....+...  ..||||||++|. +.....  ...+++...+..++.|++.+|.+||+ .||+||||||+||
T Consensus        74 ~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NI  149 (190)
T cd05145          74 KRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNI  149 (190)
T ss_pred             HHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhE
Confidence            44566776544443332  248999999975 322222  34578889999999999999999999 9999999999999


Q ss_pred             EEccCCcEEEeccCCcccc
Q 007046          179 ILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~  197 (620)
                      |++ ++.++|+|||+++..
T Consensus       150 ll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         150 LYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EEE-CCCEEEEEcccceec
Confidence            999 899999999999765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=1.9e-18  Score=170.10  Aligned_cols=191  Identities=14%  Similarity=0.073  Sum_probs=132.9

Q ss_pred             eEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        44 ~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      .+...|++|+||+||++..        .+..++.+.+........   .....++.+++.++.++++|++++++    +.
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~   72 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DG   72 (218)
T ss_pred             ccceeecCCCcceEEEeec--------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cC
Confidence            3557899999999997753        224677777754433111   11334444455555577889999886    34


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecc-cCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNL-KPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDL-KP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .|++|||+.|..+....  .     . ....++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||++.....
T Consensus        73 ~~lvmeyI~G~~L~~~~--~-----~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         73 RHLDRSYLAGAAMYQRP--P-----R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             EEEEEeeecCccHHhhh--h-----h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            79999999986554321  1     1 12457889999999999999999999 79999999999999999999985432


Q ss_pred             CCC-----CCCCC-----CCcCCCCCCCCcccccCCCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCC
Q 007046          200 IPL-----PSSDL-----PRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGR  256 (620)
Q Consensus       200 ~~~-----~~~~~-----~~~~GT~~YmAPE~~~~~~~~~~s-~~sDVwSlGvil~elltG~~Pf~~~  256 (620)
                      ...     ...+.     .....++.|++|+...-.  ...+ .+.++++.|+.+|.++|+..|+.+.
T Consensus       145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l--~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL--KRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh--ccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            110     00000     012368899999875421  1233 5678889999999999999887654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.77  E-value=9.5e-19  Score=175.24  Aligned_cols=173  Identities=14%  Similarity=0.113  Sum_probs=121.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHH--------HHHHHHHHHHccCCCcee
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--------LERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~--------~~~~~~~~l~~~~h~nIv  109 (620)
                      +-..+|++++.||.|+||.||++.. .       +..+|||++++.........        .+++.. .+..+.|++|.
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~-------~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~-~l~rL~~~GI~   98 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-D-------YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIV-QTDRVRSEGLA   98 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-C-------CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHH-HHHHHHHCCCC
Confidence            4467899999999999999999753 2       23599999986554332221        222222 34445899999


Q ss_pred             EeEEEEEEC--------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          110 WLQGISVIN--------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       110 ~l~g~~~~~--------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      .+.+++...        +..+|+|||++|..+..+.     .+++    ....+++.+|..||+.|++|||+||.||+++
T Consensus        99 ~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359         99 SLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             cceEeeeecccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            988886643        3589999999985443332     1232    3456999999999999999999999999999


Q ss_pred             cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHH
Q 007046          182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML  247 (620)
Q Consensus       182 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ell  247 (620)
                      .++ ++|+|||..+......    ..           ..+..   ...|..++|+|+||+++..+.
T Consensus       170 ~~g-i~liDfg~~~~~~e~~----a~-----------d~~vl---er~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        170 KNG-LRIIDLSGKRCTAQRK----AK-----------DRIDL---ERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCC-EEEEECCCcccccchh----hH-----------HHHHH---HhHhcccccccceeEeehHHH
Confidence            888 9999999876542110    00           00121   123567899999999877554

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=5.6e-18  Score=196.47  Aligned_cols=243  Identities=19%  Similarity=0.254  Sum_probs=174.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +..+.|.|.+.||+|+||.||+|....       ++.||+|+-++......   .+...++.     ..--+.|..+...
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-------~~~~alK~e~P~~~WEfYI~~q~~~RLk-----~~~~~~~~~~~~a  762 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-------GKLVALKVEKPPNPWEFYICLQVMERLK-----PQMLPSIMHISSA  762 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-------CcEEEEEeecCCCceeeeehHHHHHhhc-----hhhhcchHHHHHH
Confidence            556789999999999999999998644       46899999987664332   22222221     1112334444444


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-------CCcE
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-------ADRA  186 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-------~~~v  186 (620)
                      ....+..+||+||.+ |+|+|++.  ....+++..++.+..|++..+++||..+|||+||||+|+||-.       +-.+
T Consensus       763 ~~~~~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l  840 (974)
T KOG1166|consen  763 HVFQNASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGL  840 (974)
T ss_pred             HccCCcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccce
Confidence            455677899999999 99999997  5567899999999999999999999999999999999999932       3468


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~  266 (620)
                      +|+|||.+--+.-- .....+...++|-.+-.+|+..|.   +.++..|.|+|+.+++-||.|+.-          + +.
T Consensus       841 ~lIDfG~siDm~lf-p~~~~F~~~~~td~f~C~EM~~gr---pWtYq~DyfGlAa~~h~mLFG~y~----------q-~~  905 (974)
T KOG1166|consen  841 YLIDFGRSIDMKLF-PDGTKFKAVWHTDLFDCIEMREGR---PWTYQIDYFGLAATVHVMLFGKYM----------E-VK  905 (974)
T ss_pred             EEEecccceeeeEc-CCCcEEeeeeccccchhHHHhcCC---CCchhhhhHHHHHHHHHHHHHHHH----------H-hc
Confidence            99999987533211 122345667889999999999765   899999999999999999999631          1 22


Q ss_pred             hccCC---CCCCCCCCHHHH-HHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          267 RRQEI---PPIPSGLPPAVE-NVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       267 ~~~~~---~~~p~~~s~~l~-~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+...   ..++..+-.++. +++..+|..|...=|...+|...|+.
T Consensus       906 ~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~  952 (974)
T KOG1166|consen  906 NGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEE  952 (974)
T ss_pred             CCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHH
Confidence            22111   112333333333 67788887666666777776655543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.73  E-value=1.5e-17  Score=181.52  Aligned_cols=208  Identities=22%  Similarity=0.263  Sum_probs=162.5

Q ss_pred             HccCCCceeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeecccCCcE
Q 007046          101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGI-LVLNLKPFNF  178 (620)
Q Consensus       101 ~~~~h~nIv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gI-iHrDLKP~NI  178 (620)
                      +.+.|.|+.++.|.+..+...++|.+||. |+|.|.+.. ....++......++++|+.||+|||...| .|+.|+..|.
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            34679999999999999999999999998 899998875 45677888888999999999999999876 9999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCC----CCchhhHHHHHHHHHHHHhCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGP----ISFETDSWGFACSIIEMLTGVQPRC  254 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~----~s~~sDVwSlGvil~elltG~~Pf~  254 (620)
                      ++|....+||+|||+........ .........-...|.|||.+.......    .+.+.|+||||++++|+++...||.
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~-~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~  159 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETA-EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD  159 (484)
T ss_pred             eeeeeEEEEechhhhcccccccc-cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence            99999999999999987663200 011111122345699999997642222    4677999999999999999999997


Q ss_pred             CC----CHHHHHHHHHhccCC---CCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          255 GR----SVDEIYDAVVRRQEI---PPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       255 ~~----~~~ei~~~i~~~~~~---~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..    .+.++...+.+....   |.+.  ..+++++..++.+||..+|.+||+++++-..++..
T Consensus       160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence            52    334666666552222   2222  14566899999999999999999999998766653

>PRK10345 hypothetical protein; Provisional

Probab=99.71  E-value=1e-16  Score=159.28  Aligned_cols=133  Identities=15%  Similarity=0.127  Sum_probs=94.5

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc----CCCceeEeEEEEEECC--
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ----GVEGICWLQGISVING--  119 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~----~h~nIv~l~g~~~~~~--  119 (620)
                      .+.||+|+||.||.  +..+.       ..+||++............. +...+..+.    +||||+++++++.++.  
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~-------~k~IKv~~~~~~~~~~~~~r-Ei~~l~~L~~~~~~h~nIvr~yg~~et~~g~   76 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDA-------QRCIKIVYHRGDGGDKEIRR-ELKYYAHLSRRLIDWSGIPRYYGTVETDCGT   76 (210)
T ss_pred             cceecCCCceEEEE--CCCCc-------CeEEEEEeccccchHHHHHH-HHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence            47899999999995  33332       24799987653333333333 332333332    6899999999998863  


Q ss_pred             -E-EEEEEecCC---CChHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeecccCCcEEEccC----CcEEEe
Q 007046          120 -K-ICIIMKFYE---GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI-LQLHSKGILVLNLKPFNFILNEA----DRAVLG  189 (620)
Q Consensus       120 -~-~~IVmE~~~---GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL-~yLHs~gIiHrDLKP~NILld~~----~~vkL~  189 (620)
                       . +.+||||+.   |+|.+.+.+   +.+++.  ..++.|++.++ +|||+++|+||||||+|||++.+    ..++|+
T Consensus        77 g~v~~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~Li  151 (210)
T PRK10345         77 GYVYDVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVC  151 (210)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence             4 348899944   577777743   346655  46678888887 99999999999999999999743    479999


Q ss_pred             ccCC
Q 007046          190 DVGI  193 (620)
Q Consensus       190 DFGl  193 (620)
                      ||+.
T Consensus       152 Dg~G  155 (210)
T PRK10345        152 DNIG  155 (210)
T ss_pred             ECCC
Confidence            9543

>smart00090 RIO RIO-like kinase

Probab=99.69  E-value=1e-16  Score=162.42  Aligned_cols=144  Identities=19%  Similarity=0.135  Sum_probs=101.6

Q ss_pred             CeeEEeeeeccCceEEEEEE-EcCCCcCCCcceEEEEEEecCCchh-----------------------HHHHHHHHHHH
Q 007046           42 ALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKED-----------------------RMRVLLERLND   97 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~-~~~t~ed~~~~~~VAIK~l~~~~~~-----------------------~~~~~~~~~~~   97 (620)
                      -|++.+.||+|+||.||+|. +..+      ++.||||+++.....                       ........+..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~------g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  102 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGS------GKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR  102 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCC------CcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence            58899999999999999998 4333      358999999754210                       01112223333


Q ss_pred             HHHHccC-CCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeecccC
Q 007046           98 LFLKCQG-VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKP  175 (620)
Q Consensus        98 ~~l~~~~-h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g-IiHrDLKP  175 (620)
                      .+.++.. ...++.++++    ...+|||||++|..+.... .....+....+..++.||+.+|.+||+.| |+||||||
T Consensus       103 ~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp  177 (237)
T smart00090      103 NLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE  177 (237)
T ss_pred             HHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence            3333322 2234444443    2358999999985443322 13345667778899999999999999999 99999999


Q ss_pred             CcEEEccCCcEEEeccCCcccc
Q 007046          176 FNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       176 ~NILld~~~~vkL~DFGla~~~  197 (620)
                      +||+++ ++.++|+|||.+...
T Consensus       178 ~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      178 YNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             hhEEEE-CCCEEEEEChhhhcc
Confidence            999999 889999999988654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=6.6e-16  Score=152.57  Aligned_cols=134  Identities=20%  Similarity=0.278  Sum_probs=99.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHH-----HHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMR-----VLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~-----~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      +.||+|++|.||+|.+.        +..|++|........  ...     .....+. ..+..+.|++|.....++...+
T Consensus         2 ~~l~~G~~~~vy~~~~~--------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~~~~i~~p~~~~~~~~   72 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL--------GIKAVIKWRIPKRYRHPELDERIRRERTRREA-RIMSRARKAGVNVPAVYFVDPE   72 (211)
T ss_pred             cccccCceEEEEEEeeC--------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCeEEEEeCC
Confidence            57999999999999862        235899987643321  111     1111222 2444556778777777777778


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..+++|||++| ++.+.+..  .   .. ....++.+++.+|.+||+.+++|+|++|.|||++ ++.++|+|||+++.
T Consensus        73 ~~~lv~e~~~G~~L~~~~~~--~---~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         73 NFIIVMEYIEGEPLKDLINS--N---GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCEEEEEEeCCcCHHHHHHh--c---cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            89999999997 55555432  1   12 7889999999999999999999999999999999 88999999998764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.67  E-value=2.5e-17  Score=177.17  Aligned_cols=172  Identities=20%  Similarity=0.245  Sum_probs=131.0

Q ss_pred             EEEEEEecCC-CChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++||.|++|. .+|.+++.+.+ ....+....+.++.|++.|++|   ++.+||||||.||+...+..+||+|||+....
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence            5899999998 67777776322 2456778899999999999999   99999999999999999999999999998766


Q ss_pred             cCCC---CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          198 LGIP---LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       198 ~~~~---~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ....   ......+...||..||+||++.++   .|+.++||||||++|+|+++ =..++.   ....+..+..+..++.
T Consensus       407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~---~y~~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~ip~~  480 (516)
T KOG1033|consen  407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQ---QYSEKVDIYALGLILAELLIQFSTQFE---RIATLTDIRDGIIPPE  480 (516)
T ss_pred             ccCCcccchhhhhhhcccccccCCHHHHhhh---hhhhhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCCCChH
Confidence            4432   112234566899999999999866   69999999999999999997 333332   2223333444444434


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMT  301 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~  301 (620)
                      +..+.|. -..|+.+++.+.|.+||++.
T Consensus       481 ~~~d~p~-e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  481 FLQDYPE-EYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             HhhcCcH-HHHHHHHhcCCCcccCchHH
Confidence            4444544 46899999999999999443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.60  E-value=3.5e-15  Score=146.61  Aligned_cols=136  Identities=18%  Similarity=0.194  Sum_probs=95.5

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HH-------------------HHHHHHHHHHHHH
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RM-------------------RVLLERLNDLFLK  101 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~-------------------~~~~~~~~~~~l~  101 (620)
                      |.+.+.||+|+||.||+|.+. +      ++.||||+++.....  ..                   ......+. ..+.
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~------g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~   88 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-D------GNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEF-AALK   88 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-C------CCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHH-HHHH
Confidence            777899999999999999853 2      357999997653210  00                   00011111 1233


Q ss_pred             ccCCC--ceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          102 CQGVE--GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       102 ~~~h~--nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      .+.+.  .++..++    ....|+||||++|..+..+..       ......++.+++.++.++|+.||+||||||+||+
T Consensus        89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil  157 (198)
T cd05144          89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNIL  157 (198)
T ss_pred             HHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence            33444  3444443    235689999999855443321       1345678899999999999999999999999999


Q ss_pred             EccCCcEEEeccCCcccc
Q 007046          180 LNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~  197 (620)
                      ++.++.++|+|||++...
T Consensus       158 l~~~~~~~liDfg~~~~~  175 (198)
T cd05144         158 VDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             EcCCCcEEEEECCccccC
Confidence            999999999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.59  E-value=8.9e-15  Score=165.34  Aligned_cols=134  Identities=19%  Similarity=0.200  Sum_probs=98.0

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCC--chh---H-H-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--KED---R-M-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~--~~~---~-~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      |...+.||+|+||.||+|.+....        +++|+....  ...   . . ......+. .++..++|++++....++
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~~--------~v~k~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~~~~i~~p~~~~  405 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGRD--------AVIKERVPKGYRHPELDERLRTERTRAEA-RLLSEARRAGVPTPVIYD  405 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCcc--------ceeEEEecccccchhHHHHHHHHHHHHHH-HHHHhhcccCCCeeEEEE
Confidence            456789999999999999864332        344432211  111   1 1 11112222 355667889998888777


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ......++||||++| +|.+.+.          ....++.|++.+|.|||+.+++||||||+|||+ .++.++|+|||++
T Consensus       406 ~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        406 VDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             EeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            777788999999996 4444432          356789999999999999999999999999999 6789999999998


Q ss_pred             cc
Q 007046          195 HL  196 (620)
Q Consensus       195 ~~  196 (620)
                      +.
T Consensus       475 ~~  476 (535)
T PRK09605        475 KY  476 (535)
T ss_pred             cc
Confidence            75

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.59  E-value=9.7e-15  Score=142.99  Aligned_cols=130  Identities=20%  Similarity=0.228  Sum_probs=91.2

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hH--HH---HHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DR--MR---VLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~--~~---~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      .||+|+||.||+|.+.        +..|++|+......  ..  ..   .....+. .++..+.++++.....++...+.
T Consensus         1 ~ig~G~~~~vy~~~~~--------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~~~~i~~p~~~~~~~~~   71 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--------GLKAVIKERVPKSYRHPELDERIRRERTRNEA-RLLSRARKAGVNTPVVYDVDPDN   71 (199)
T ss_pred             CCCCCceEEEEEeecC--------CccEEEEEecCCcCcCchHHHHHHHHHHHHHH-HHHHHHHHCCCCCCEEEEEECCC
Confidence            3899999999999842        24699998654321  11  11   1111222 23444556665554555556667


Q ss_pred             EEEEEecCCCC-hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          121 ICIIMKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       121 ~~IVmE~~~Gs-Lld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .++||||++|. +.+.+..  ..       ..++.|++.+|.+||+.+++|+|++|.||+++ ++.++++|||+++.
T Consensus        72 ~~lv~e~~~g~~l~~~~~~--~~-------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        72 KTIVMEYIEGKPLKDVIEE--GN-------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CEEEEEEECCccHHHHHhh--cH-------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            89999999964 4444321  11       17899999999999999999999999999999 89999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.58  E-value=7.8e-17  Score=182.88  Aligned_cols=258  Identities=20%  Similarity=0.248  Sum_probs=190.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ...|.+.+.||+|+|+.|-........+     ..+|.|.+.... ......-...+..+...+.+|+|++++++.....
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~-----~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~   93 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPE-----SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP   93 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCc-----ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC
Confidence            4568888889999999999987655444     467888776543 1111111111221222333499999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeeecccCCcEEEccCC-cEEEeccCCc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGG-KLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEAD-RAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~-~l~~~~~~~i~~qIa~gL~yLH-s~gIiHrDLKP~NILld~~~-~vkL~DFGla  194 (620)
                      +..+++++|..| ++.+.+.. ... ..+...+.+++.|+..+|.|+| ..++.|||+||+|.+++..+ ..+++|||+|
T Consensus        94 ~~~~~~~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   94 RSYLLSLSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA  172 (601)
T ss_pred             cccccccCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence            999999999885 44444421 233 5677888999999999999999 99999999999999999999 9999999999


Q ss_pred             ccccCCCCCCCCCCCcCC-CCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccC--
Q 007046          195 HLLLGIPLPSSDLPRRLG-TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQE--  270 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~G-T~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei-~~~i~~~~~--  270 (620)
                      ..+....-........+| ++.|+|||...+.  .-.....|+||.|+++.-+++|..||........ +........  
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~--~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  250 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK--AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF  250 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccch--hhcCCCcccccccccccccccCCCCccccccccccceeeccccccc
Confidence            887542223334455688 9999999998753  1234578999999999999999999875443321 111111111  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .......++....+++.+++..+|..|.+.+++..
T Consensus       251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  251 TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccCccccCChhhhhcccccccCCchhccccccccc
Confidence            23345778899999999999999999999998765

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.57  E-value=1.6e-14  Score=139.87  Aligned_cols=136  Identities=17%  Similarity=0.185  Sum_probs=90.5

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHH---------------------HHHHHHHHHc
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLL---------------------ERLNDLFLKC  102 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~---------------------~~~~~~~l~~  102 (620)
                      .+.||+|+||.||+|.+. +      ++.||||++++.....  .....                     ..+...+...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~------~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l   74 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-D------GEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL   74 (187)
T ss_pred             CcccccccceeEEEEECC-C------CCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH
Confidence            467999999999999854 2      3579999987643211  11110                     1111111121


Q ss_pred             cCC-CceeEeEEEEEECCEEEEEEecCCCC-hH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcE
Q 007046          103 QGV-EGICWLQGISVINGKICIIMKFYEGS-VG-DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNF  178 (620)
Q Consensus       103 ~~h-~nIv~l~g~~~~~~~~~IVmE~~~Gs-Ll-d~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NI  178 (620)
                      .++ -.+.++++.    ...++||||++|+ +. ..+..   .... ..+..++.+++.++.++|. .+|+|+||||+||
T Consensus        75 ~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni  146 (187)
T cd05119          75 YEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNI  146 (187)
T ss_pred             HHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence            111 224444433    2469999999972 11 11111   0111 6678999999999999999 9999999999999


Q ss_pred             EEccCCcEEEeccCCcccc
Q 007046          179 ILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~  197 (620)
                      +++ ++.++|+|||.+...
T Consensus       147 li~-~~~~~liDfg~a~~~  164 (187)
T cd05119         147 LVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             EEE-CCcEEEEECcccccc
Confidence            999 999999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.50  E-value=1.3e-13  Score=126.35  Aligned_cols=133  Identities=17%  Similarity=0.083  Sum_probs=100.7

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC-CceeEeEEEEEECCEEEE
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-EGICWLQGISVINGKICI  123 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h-~nIv~l~g~~~~~~~~~I  123 (620)
                      +.+.||+|.++.||++....        ..+++|.......  ...+ ..+...+..+.++ .++++++.++...+..++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--------~~~~iK~~~~~~~--~~~~-~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~   70 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--------EDYVLKINPSREK--GADR-EREVAILQLLARKGLPVPKVLASGESDGWSYL   70 (155)
T ss_pred             cceecccccccceEEEEecC--------CeEEEEecCCCCc--hhHH-HHHHHHHHHHHHcCCCCCeEEEEcCCCCccEE
Confidence            45789999999999998633        3699999876543  1122 2222223333233 678888888877788999


Q ss_pred             EEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          124 IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       124 VmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~---gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      +|||++|..+..+        +......++.+++.+|++||..   +++|+||+|+||+++..+.+++.|||.++.
T Consensus        71 v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          71 LMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            9999997433221        4566678899999999999985   699999999999999989999999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.46  E-value=6.7e-13  Score=134.79  Aligned_cols=144  Identities=17%  Similarity=0.167  Sum_probs=97.1

Q ss_pred             CCcCCCCeeEE-eeee-ccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-------------hHHHHHHHHHHHHHH
Q 007046           36 AWIKPSALKLR-HRIG-RGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-------------DRMRVLLERLNDLFL  100 (620)
Q Consensus        36 ~~I~~~~y~i~-~~IG-~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-------------~~~~~~~~~~~~~~l  100 (620)
                      .+.+++.+... ..|| .|+.|+||++...        +..++||.+.....             ........+ . .++
T Consensus        25 ~~~~~~~~~~~~~~lg~~~g~gtv~~v~~~--------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE-~-~ll   94 (239)
T PRK01723         25 ALFDPDFWQQQARVVGSAKGRGTTWFVQTP--------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAE-F-RLL   94 (239)
T ss_pred             hhcCHHHHhhcCceeecCCCCccEEEEEeC--------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHH-H-HHH
Confidence            35666665544 3577 8999999998642        24689998854211             001111122 2 234


Q ss_pred             HccCCCc--eeEeEEEEEEC-C---EEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeec
Q 007046          101 KCQGVEG--ICWLQGISVIN-G---KICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN  172 (620)
Q Consensus       101 ~~~~h~n--Iv~l~g~~~~~-~---~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrD  172 (620)
                      ..+.|++  ++..+++.... .   ..+||||+++|  ++.+.+.   ..++++..    +.||+.+|.+||+.||+|||
T Consensus        95 ~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~GI~HrD  167 (239)
T PRK01723         95 AQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAGVYHAD  167 (239)
T ss_pred             HHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCCCCCCC
Confidence            4455555  46666664432 2   23599999996  5555543   34555543    57899999999999999999


Q ss_pred             ccCCcEEEccCCcEEEeccCCccc
Q 007046          173 LKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       173 LKP~NILld~~~~vkL~DFGla~~  196 (620)
                      |||+|||++.++.++|+|||.++.
T Consensus       168 lkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        168 LNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CCchhEEEcCCCCEEEEECCCccc
Confidence            999999999999999999998764

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.36  E-value=3.7e-13  Score=154.33  Aligned_cols=269  Identities=17%  Similarity=0.218  Sum_probs=195.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...++.+.+.+-+-+|+|+.++.+.-..++      +..++|+......-.   .+.....-  .......+|-++....
T Consensus       800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sg------h~~~~~v~~~ap~i~~~~~~s~r~~s--~~~i~p~~P~v~~~~~  871 (1205)
T KOG0606|consen  800 RSSPDGFEITKPSQSGSPSSSFPASPAGSG------HTRPSKVHGLAPKIRTNDYESIRSKS--NILITPRSPAVVRSFP  871 (1205)
T ss_pred             cCCCccceecccccCCCCcccccCCccccc------cccchhhhccchhhccccccccCCcc--CccccCCCCceecccC
Confidence            467889999999999999999998765554      356677654322111   11111111  1122234566666555


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      -+......+++|+|+.| ++...+.  ..+..+.+-+..++..+..+++|||+..+.|||++|.|+|+..+++.++.|||
T Consensus       872 s~~~rsP~~L~~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  872 SFPCRSPLPLVGHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFG  949 (1205)
T ss_pred             CCCCCCCcchhhHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccc
Confidence            55667789999999984 5554443  33457777788888999999999999999999999999999999999999998


Q ss_pred             CcccccCCC-------------------------CCC---CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHH
Q 007046          193 IPHLLLGIP-------------------------LPS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII  244 (620)
Q Consensus       193 la~~~~~~~-------------------------~~~---~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~  244 (620)
                      +........                         ...   .......||+.|.+||...+.   .....+|+|++|++++
T Consensus       950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~---~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen  950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR---RHGSAADWWSSGVCLF 1026 (1205)
T ss_pred             cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc---cCCCcchhhhhhhhhh
Confidence            433221000                         000   012234699999999999765   3455889999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHhccCC-CCCCCCCCHHHHHHHHHhhhcCcCCCCCHH---HHHH-HHHhCCCCCCCCC
Q 007046          245 EMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMT---DILR-VFKSDGGWTGHGS  318 (620)
Q Consensus       245 elltG~~Pf~~~~~~ei~~~i~~~~~~-~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~---eil~-~L~~~~~~~~~~~  318 (620)
                      |.++|.+||....++++++.+...... +.-+...+.++++++.+.+..+|.+|..+.   ++-. .|+...+|.....
T Consensus      1027 e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred             hhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcccccc
Confidence            999999999999999999888765543 334567899999999999999999999876   3333 6777788876544

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=5.1e-13  Score=146.45  Aligned_cols=257  Identities=17%  Similarity=0.098  Sum_probs=184.2

Q ss_pred             CCCCeeEEeeeec--cCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHH-HHHHHHHHHccCCCceeEeEEEE
Q 007046           39 KPSALKLRHRIGR--GPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLL-ERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        39 ~~~~y~i~~~IG~--G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~-~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ....+.+.+.+|.  |.+|.||.+....    ....+.+|+|.-+........... .+...-..+...|++.++.+..+
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~----~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~  187 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTN----SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW  187 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCc----ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence            3445677788999  9999999998722    123457999984432211111111 11111133445689999989999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeeecccCCcEEEccC-CcEEEec
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ----GILQLHSKGILVLNLKPFNFILNEA-DRAVLGD  190 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~----gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~D  190 (620)
                      +..+..|+-+|+|..++.+.... ...-++...++.++.+...    ||.++|+.+++|-|+||.||++..+ ..++++|
T Consensus       188 e~~~~lfiqtE~~~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~d  266 (524)
T KOG0601|consen  188 EGSGILFIQTELCGESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTD  266 (524)
T ss_pred             ccCCcceeeeccccchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCC
Confidence            99999999999999777776653 4455788899999999999    9999999999999999999999999 8899999


Q ss_pred             cCCcccccCCCCCCCC--CCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSD--LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~--~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      ||+...+.........  .....|...|++||..++    -++...|+|+||.++.+..++..++....... ...+...
T Consensus       267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~----l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~r~~  341 (524)
T KOG0601|consen  267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG----LATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQLRQG  341 (524)
T ss_pred             cceeEEccCCccccceeeeecCCCCceEeChhhhcc----ccchHhhhcchhhhhHhhHhhcccccCCCCCC-ccccccc
Confidence            9998877543321111  122267888999999864    47889999999999999888765543221000 1112222


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+..+..+.+.++...+.++++.+|..|++.+.+.+
T Consensus       342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            2344455677888888999999999999999988776

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.31  E-value=1.3e-11  Score=135.99  Aligned_cols=141  Identities=20%  Similarity=0.196  Sum_probs=90.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHH--------------------------HH------
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLL--------------------------ER------   94 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~--------------------------~~------   94 (620)
                      +.||+|++|.||+|+.+       +|+.||||+.++.........+                          .+      
T Consensus       123 ~plasaSigQVh~A~l~-------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  195 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR  195 (437)
T ss_pred             cceeeeehhheEEEEec-------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence            46999999999999864       2357999999875322211100                          00      


Q ss_pred             -------HHH---HHHHc-cCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHH-HHHH
Q 007046           95 -------LND---LFLKC-QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ-GILQ  162 (620)
Q Consensus        95 -------~~~---~~l~~-~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~-gL~y  162 (620)
                             +..   .+... .++++|.-..-+....+..+|||||++|..++.+.......+   ....++.+++. .+..
T Consensus       196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~q  272 (437)
T TIGR01982       196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQ  272 (437)
T ss_pred             HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHH
Confidence                   000   11112 234443322222223445799999999744433332221122   23456666665 4788


Q ss_pred             HHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       163 LHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +|..|++|+|+||.||+++.++.++++|||++..+
T Consensus       273 l~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       273 VLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             HHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            99999999999999999999999999999998766

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.21  E-value=7.3e-10  Score=124.18  Aligned_cols=142  Identities=15%  Similarity=0.204  Sum_probs=87.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH------------------------------HH
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR------------------------------VL   91 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~------------------------------~~   91 (620)
                      +|+. +.||+|++|.||+|+.+.++      +.||||++++.-.....                              ++
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G------~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~  193 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNG------REVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF  193 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCC------CEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence            4555 68999999999999986544      47999999865321100                              00


Q ss_pred             ----------HHHHHH--HHHHccCCCceeEeEEEEE-ECCEEEEEEecCCCChHHHHHHhcCCC-----CCHHHHHHHH
Q 007046           92 ----------LERLND--LFLKCQGVEGICWLQGISV-INGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYA  153 (620)
Q Consensus        92 ----------~~~~~~--~~l~~~~h~nIv~l~g~~~-~~~~~~IVmE~~~GsLld~l~~~~~~~-----l~~~~~~~i~  153 (620)
                                ..+...  .+.....+.+.+.+-.++. .....+|||||+.|.-.+.+.......     +.+..+..++
T Consensus       194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~  273 (537)
T PRK04750        194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF  273 (537)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence                      000000  1122222333333323222 245678999999974443332222222     3333444444


Q ss_pred             HHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEEeccCCcccc
Q 007046          154 IDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLL  197 (620)
Q Consensus       154 ~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL~DFGla~~~  197 (620)
                      .|+       +..|++|+|+||.||+++.++    .++++|||++..+
T Consensus       274 ~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        274 TQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             HHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            444       468999999999999999888    9999999998755

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=6.8e-11  Score=121.10  Aligned_cols=195  Identities=16%  Similarity=0.164  Sum_probs=133.1

Q ss_pred             cCCCceeEeEEEEEECC-----EEEEEEecCC-CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeec
Q 007046          103 QGVEGICWLQGISVING-----KICIIMKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSK--GILVLN  172 (620)
Q Consensus       103 ~~h~nIv~l~g~~~~~~-----~~~IVmE~~~-GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~--gIiHrD  172 (620)
                      +.|.|||++|.|+.+..     ...+++||+. |++-.++.+.+  +..+......+|+.||+.||.|||+.  .|+|++
T Consensus       124 lvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgn  203 (458)
T KOG1266|consen  124 LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGN  203 (458)
T ss_pred             HHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCC
Confidence            36889999999987532     4788999998 78777776553  46688889999999999999999998  499999


Q ss_pred             ccCCcEEEccCCcEEEeccCCcccccCCCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCC
Q 007046          173 LKPFNFILNEADRAVLGDVGIPHLLLGIPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ  251 (620)
Q Consensus       173 LKP~NILld~~~~vkL~DFGla~~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~  251 (620)
                      |..+.|++..++-+|++--.-......... .........+-++|.+||+-.   ....+..+|||+||++.++|..+..
T Consensus       204 lTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  204 LTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT---TTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             cchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc---ccccccchhhhhhhHHHHHHHHhee
Confidence            999999999999998764322111100000 001112234678899999853   2346678999999999999988764


Q ss_pred             C-CCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          252 P-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       252 P-f~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      - -.+....+.-..+...  ......++   -+.++..|++..|..||++.+++.
T Consensus       281 q~tnseS~~~~ee~ia~~--i~~len~l---qr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  281 QSTNSESKVEVEENIANV--IIGLENGL---QRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             ccCCCcceeehhhhhhhh--eeeccCcc---ccCcCcccccCCCCCCcchhhhhc
Confidence            3 2222211111111110  00011111   246899999999999999998875

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.12  E-value=5.8e-10  Score=109.61  Aligned_cols=144  Identities=16%  Similarity=0.084  Sum_probs=94.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---------------------hHHHHHH----HHHHHHHHH
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---------------------DRMRVLL----ERLNDLFLK  101 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---------------------~~~~~~~----~~~~~~~l~  101 (620)
                      ..||.|-=+.||.|...........+..+|||+.+....                     .......    +++...+.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            579999999999997432100111346899999763110                     0011111    122223333


Q ss_pred             ccCC-CceeEeEEEEEECCEEEEEEecCCCChH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeecccCCcE
Q 007046          102 CQGV-EGICWLQGISVINGKICIIMKFYEGSVG-DRMAQLKGGKLSLSNVFRYAIDLAQGILQL-HSKGILVLNLKPFNF  178 (620)
Q Consensus       102 ~~~h-~nIv~l~g~~~~~~~~~IVmE~~~GsLl-d~l~~~~~~~l~~~~~~~i~~qIa~gL~yL-Hs~gIiHrDLKP~NI  178 (620)
                      +... -+++.++++    ...+|||||+.|+.+ ...  ++...++......+..|++.+|..| |..|++|+||++.||
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~--Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI  156 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPK--LKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM  156 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchh--hhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            3222 346666654    457899999986421 111  2334566667778889999999999 899999999999999


Q ss_pred             EEccCCcEEEeccCCcccc
Q 007046          179 ILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~  197 (620)
                      |++ ++.+.|+|||.+...
T Consensus       157 L~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         157 LWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             EEE-CCcEEEEECCCceeC
Confidence            997 578999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.11  E-value=2.8e-10  Score=108.07  Aligned_cols=128  Identities=18%  Similarity=0.004  Sum_probs=84.6

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEE
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM  125 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVm  125 (620)
                      .+.|+.|.++.||+++..        +..|++|+.......... . +.+...+..+.+...+++++.+.  ....++||
T Consensus         3 ~~~l~~G~~~~vy~~~~~--------~~~~~lK~~~~~~~~~~~-~-~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~   70 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--------NKKYVVRIPGNGTELLIN-R-ENEAENSKLAAEAGIGPKLYYFD--PETGVLIT   70 (170)
T ss_pred             eeecCCcccCceEEEEEC--------CeEEEEEeCCCCcccccC-H-HHHHHHHHHHHHhCCCCceEEEe--CCCCeEEE
Confidence            467899999999999743        247999998655321111 1 11111222211222245555543  33458999


Q ss_pred             ecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeecccCCcEEEccCCcEEEeccCCcc
Q 007046          126 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGI-----LVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       126 E~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gI-----iHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ||++|..+...         ......++.+++.+|+.||+.++     +|+|++|.||+++ ++.++++||+.+.
T Consensus        71 e~i~G~~l~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          71 EFIEGSELLTE---------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             EecCCCccccc---------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            99998443221         01123456899999999999985     9999999999999 6789999999764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.05  E-value=1.6e-10  Score=127.00  Aligned_cols=248  Identities=18%  Similarity=0.112  Sum_probs=171.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHH-HHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLL-ERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~-~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ....+|.++..||.|.|+.|+.......     .+..|++|.+.+.......... -.+..+...+.-|.+++.++..+.
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~-----~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~  336 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPE-----GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS  336 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCC-----CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc
Confidence            4455788999999999999999873322     2358999988654332222111 111212334556788888887777


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~DFGla~  195 (620)
                      ..+..||=-|||.|.+.++... -...+.+...+++..|++.++.++|+..++|+|+||+||++..+ +..+++|||.++
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             ccccccCchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence            7788889999998655555432 34567888999999999999999999999999999999999987 778899999886


Q ss_pred             cccCCCCCCCCCCCcCCCCCCC-CcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHhccCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYM-APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~Ym-APE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P-f~~~~~~ei~~~i~~~~~~~~  273 (620)
                      .+.-     . ......+-+++ ..|.+..  ...+..+.|++|||..+.+..++..- ..+....    .+. ....+.
T Consensus       416 ~~~~-----~-~~~~~~~~r~~p~~~~~~e--~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~----~i~-~~~~p~  482 (524)
T KOG0601|consen  416 RLAF-----S-SGVFHHIDRLYPIAEILLE--DYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL----TIR-SGDTPN  482 (524)
T ss_pred             ccce-----e-cccccccccccccchhhcc--ccccccccccccccccccccccCcccCcccccce----eee-cccccC
Confidence            4311     0 11122333444 2555442  33677899999999999999998643 2221111    111 122333


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+ ....++..+.+.++..++..||.+.++..
T Consensus       483 ~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~  513 (524)
T KOG0601|consen  483 LP-GLKLQLQVLLKVMINPDRKRRPSAVELSL  513 (524)
T ss_pred             CC-chHHhhhhhhhhhcCCccccchhhhhhcc
Confidence            33 34488899999999999999999888765

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.02  E-value=1e-08  Score=111.03  Aligned_cols=211  Identities=15%  Similarity=0.175  Sum_probs=151.4

Q ss_pred             eEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE----CCEEEEEEecCC-
Q 007046           55 GEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI----NGKICIIMKFYE-  129 (620)
Q Consensus        55 G~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~----~~~~~IVmE~~~-  129 (620)
                      .+.|++....++.      .|++|.++-.............  ...+.+.|.|||.+.++|.+    +..+++|++|++ 
T Consensus       290 ~Ttyk~~s~~DG~------~YvLkRlhg~r~~~~nk~t~lv--e~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~  361 (655)
T KOG3741|consen  290 ITTYKATSNVDGN------AYVLKRLHGDRDQSTNKDTSLV--EAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS  361 (655)
T ss_pred             ceeEeeeeccCCc------eeeeeeeccccccCcccchHHH--HHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence            5789998766654      6999999544332221111111  13455689999999999874    346999999999 


Q ss_pred             -CChHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          130 -GSVGDRMAQLK-------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       130 -GsLld~l~~~~-------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                       ++|++++....             +..+++...+.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|+..|+..
T Consensus       362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~D  441 (655)
T KOG3741|consen  362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMD  441 (655)
T ss_pred             CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEeccccee
Confidence             57888764221             2346789999999999999999999999999999999999999999999999876


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHH-HHHHHhccCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEI-YDAVVRRQEIPP  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P-f~~~~~~ei-~~~i~~~~~~~~  273 (620)
                      .+..++          +       |.+.+      ..+-|.=.||.+++.|.||..- +.....++. ++.         
T Consensus       442 vl~~d~----------~-------~~le~------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~---------  489 (655)
T KOG3741|consen  442 VLQEDP----------T-------EPLES------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR---------  489 (655)
T ss_pred             eecCCC----------C-------cchhH------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH---------
Confidence            553211          0       11211      1256899999999999999643 222222222 222         


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  306 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~  306 (620)
                      +....+.++++++..+...++++ -++.+++.+
T Consensus       490 I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  490 ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            24467899999999999999887 677777763

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.97  E-value=1.7e-08  Score=112.42  Aligned_cols=162  Identities=18%  Similarity=0.236  Sum_probs=115.7

Q ss_pred             eEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHH
Q 007046           73 HEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRY  152 (620)
Q Consensus        73 ~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i  152 (620)
                      .+|.|...+.... .......+.. ..++.++||||++++..++.++.+|||+|-+.- +...+..     +....+.-.
T Consensus        38 ~~vsVF~~~~~~~-~~~~~~~~A~-k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~-----l~~~~v~~G  109 (690)
T KOG1243|consen   38 GPVSVFVYKRSNG-EVTELAKRAV-KRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE-----LGKEEVCLG  109 (690)
T ss_pred             CceEEEEEeCCCc-hhhHHHHHHH-HHhhhccCchhhhhhhhhcccCceEEEeecccc-HHHHHHH-----hHHHHHHHH
Confidence            4788888876665 2222222222 356778999999999999999999999999863 3444443     235566677


Q ss_pred             HHHHHHHHHHHH-HCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCC
Q 007046          153 AIDLAQGILQLH-SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPIS  231 (620)
Q Consensus       153 ~~qIa~gL~yLH-s~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s  231 (620)
                      +.||+.||.||| +.+++|++|.-..|+++..|..||++|-++....+.....   ....---.|..|+.+..     -.
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~---~~~~~~~s~~~P~~~~~-----s~  181 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA---KSLYLIESFDDPEEIDP-----SE  181 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc---ccchhhhcccChhhcCc-----cc
Confidence            889999999998 5689999999999999999999999999876543321100   01111123566776531     12


Q ss_pred             chhhHHHHHHHHHHHHhCC
Q 007046          232 FETDSWGFACSIIEMLTGV  250 (620)
Q Consensus       232 ~~sDVwSlGvil~elltG~  250 (620)
                      ...|.|.|||++++++.|.
T Consensus       182 ~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  182 WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             cchhhhhHHHHHHHHhCcc
Confidence            4579999999999999993

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.79  E-value=7.6e-08  Score=92.30  Aligned_cols=143  Identities=20%  Similarity=0.194  Sum_probs=97.5

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc------hhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRM-RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~------~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .+..|-+|+-+.|+++.+.        ++.+.||.-....      ..+. +.....+...+.+|.. -+|+-..-++.+
T Consensus        11 ~l~likQGAEArv~~~~~~--------Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~-~GI~~P~l~~~D   81 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--------GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRA-LGIPAPRLIFID   81 (229)
T ss_pred             cceeeeccceeeEeeeccC--------CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHH-hCCCCceEEEEe
Confidence            4567889999999999753        3456777643321      1111 1111222223334332 255555556777


Q ss_pred             CCEEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cEEEeccC
Q 007046          118 NGKICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVG  192 (620)
Q Consensus       118 ~~~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~vkL~DFG  192 (620)
                      ...-+|+|||.+|  ++.+.+...............++.+|-+.+.-||.++|||+||..+||++..++   .+.++|||
T Consensus        82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   82 TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeec
Confidence            7778999999998  667776654444444444478888999999999999999999999999997665   35899999


Q ss_pred             Cccc
Q 007046          193 IPHL  196 (620)
Q Consensus       193 la~~  196 (620)
                      ++..
T Consensus       162 ls~~  165 (229)
T KOG3087|consen  162 LSSV  165 (229)
T ss_pred             chhc
Confidence            9753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.79  E-value=7.7e-08  Score=92.54  Aligned_cols=132  Identities=19%  Similarity=0.182  Sum_probs=86.7

Q ss_pred             eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc------hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        48 ~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~------~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .|++|+=+.+|.+.+..        ..+.+|.-.++.      ..+........+..++....--.|+...-+..+.+..
T Consensus         3 ~i~~GAEa~i~~~~~~g--------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~   74 (204)
T COG3642           3 LIKQGAEAIIYLTDFLG--------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG   74 (204)
T ss_pred             hhhCCcceeEEeeeccC--------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Confidence            57899999999996532        246677643321      1222222222222233333333555555556667778


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .|+|||.+|.++.......        ...++..+=.-+.-||..||+|+||.++||++...+ +.++||||+..
T Consensus        75 ~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            8999999997766333211        245666777778889999999999999999998655 99999999864

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.71  E-value=5.6e-08  Score=95.93  Aligned_cols=140  Identities=16%  Similarity=0.073  Sum_probs=91.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccC--CCceeEeEEEEEEC---CEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG--VEGICWLQGISVIN---GKI  121 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~--h~nIv~l~g~~~~~---~~~  121 (620)
                      +.|+.|.++.||+++...       +..+++|+...............+... +..+.  +.++++++.+....   +..
T Consensus         4 ~~l~~G~~n~~~~v~~~~-------g~~~ilK~~~~~~~~~~~~~~~~E~~~-~~~l~~~~~~vp~~~~~~~~~~~~~~~   75 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-------GRRLVLRRPPPGALLPSAHDVAREYRV-LRALAGTGVPVPKVLALCEDPSVLGTP   75 (223)
T ss_pred             eecCCCccceEEEEEecC-------CcceEEEeCCCcccCcccccHHHHHHH-HHHhhCCCCCCCCEEEECCCCCccCCc
Confidence            568999999999997532       246999998654321111111222222 22222  23456677766543   367


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS------------------------------------  165 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs------------------------------------  165 (620)
                      ++||||++|..+....  ....++......++.+++.+|.+||+                                    
T Consensus        76 ~~v~e~i~G~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (223)
T cd05154          76 FYVMERVDGRVLRDRL--LRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE  153 (223)
T ss_pred             eEEEEEeCCEecCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence            8999999985433221  11346667777777788888877773                                    


Q ss_pred             --------------------CCCeeecccCCcEEEcc--CCcEEEeccCCccc
Q 007046          166 --------------------KGILVLNLKPFNFILNE--ADRAVLGDVGIPHL  196 (620)
Q Consensus       166 --------------------~gIiHrDLKP~NILld~--~~~vkL~DFGla~~  196 (620)
                                          ..++|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                                23699999999999998  56688999997653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.70  E-value=2.9e-07  Score=95.10  Aligned_cols=77  Identities=16%  Similarity=0.044  Sum_probs=63.5

Q ss_pred             CEEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-------CCcEEEe
Q 007046          119 GKICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-------ADRAVLG  189 (620)
Q Consensus       119 ~~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-------~~~vkL~  189 (620)
                      ...+||||+++|  ++.+++......+.+......++.+++..+.-||..||+|+||++.|||++.       +..+.|+
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI  187 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI  187 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence            357899999997  4666654322345667788899999999999999999999999999999985       4678999


Q ss_pred             ccCCcc
Q 007046          190 DVGIPH  195 (620)
Q Consensus       190 DFGla~  195 (620)
                      ||+.++
T Consensus       188 Dl~r~~  193 (268)
T PRK15123        188 DLHRAQ  193 (268)
T ss_pred             ECCccc
Confidence            999875

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.56  E-value=2.1e-07  Score=91.00  Aligned_cols=92  Identities=16%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             HHHHccCC-CceeEeEEEEEECCEEEEEEecCC--CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeecc
Q 007046           98 LFLKCQGV-EGICWLQGISVINGKICIIMKFYE--GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ-LHSKGILVLNL  173 (620)
Q Consensus        98 ~~l~~~~h-~nIv~l~g~~~~~~~~~IVmE~~~--GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~y-LHs~gIiHrDL  173 (620)
                      .+.++... -++++++++.    ..+|||||++  |..+..+...   .++......++.+++..+.. +|..||+|+||
T Consensus        61 ~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~---~~~~~~~~~~~~~il~~~~~~~~~~givHGDL  133 (188)
T PF01163_consen   61 NLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDV---DLSPEEPKELLEEILEEIIKMLHKAGIVHGDL  133 (188)
T ss_dssp             HHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHC---GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-
T ss_pred             HHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhc---cccchhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence            34444333 2566776552    3479999999  7555555432   22234556777888885555 57999999999


Q ss_pred             cCCcEEEccCCcEEEeccCCcccc
Q 007046          174 KPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       174 KP~NILld~~~~vkL~DFGla~~~  197 (620)
                      .+.|||++.+ .+.|+|||.+...
T Consensus       134 s~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  134 SEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             STTSEEEETT-CEEE--GTTEEET
T ss_pred             ChhhEEeecc-eEEEEecCcceec
Confidence            9999999977 9999999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.49  E-value=1.2e-06  Score=93.18  Aligned_cols=245  Identities=20%  Similarity=0.267  Sum_probs=153.2

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc----eeEeEEE--EEECC
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG----ICWLQGI--SVING  119 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n----Iv~l~g~--~~~~~  119 (620)
                      ...||+|+-+.+|-.-.-         .-.+.|+.+............+    +.+--.||-    |++-...  .-...
T Consensus        16 gr~LgqGgea~ly~l~e~---------~d~VAKIYh~Pppa~~aqk~a~----la~~p~~p~~~~rvaWPqa~L~G~~~~   82 (637)
T COG4248          16 GRPLGQGGEADLYTLGEV---------RDQVAKIYHAPPPAAQAQKVAE----LAATPDAPLLNYRVAWPQATLHGGRRG   82 (637)
T ss_pred             CccccCCccceeeecchh---------hchhheeecCCCchHHHHHHHH----hccCCCCcchhhhhcccHHHhhCCCcc
Confidence            467999999999965321         1245688876543333322222    223334442    2221111  01122


Q ss_pred             -EEEEEEecCCC--ChHHHHH---Hh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          120 -KICIIMKFYEG--SVGDRMA---QL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       120 -~~~IVmE~~~G--sLld~l~---~~-~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                       .+-+.|..+.|  .+.+.+.   +. .-....+...++.+++|+.+.+.||..|..-+|+.++|+|+++++.+.|.|=.
T Consensus        83 ~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248          83 KVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             ceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc
Confidence             26678888876  2333221   11 11346789999999999999999999999999999999999999999988744


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCccccc-C-CCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCH-------HH--
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-P-EVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSV-------DE--  260 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~-~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~-------~e--  260 (620)
                      .-....    ........+|.+.|.+||... + -....-+...|.|.||++++++|.| +.||.+...       .+  
T Consensus       163 sfqi~~----ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~  238 (637)
T COG4248         163 SFQINA----NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD  238 (637)
T ss_pred             ceeecc----CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence            221111    223344557999999999864 1 1112345678999999999999885 999986421       11  


Q ss_pred             HHHHH---HhccCCC------CCC-CCCCHHHHHHHHHhhhc--CcCCCCCHHHHHHHH
Q 007046          261 IYDAV---VRRQEIP------PIP-SGLPPAVENVLLGCFEY--DLRSRPLMTDILRVF  307 (620)
Q Consensus       261 i~~~i---~~~~~~~------~~p-~~~s~~l~~Li~~cL~~--dP~~RPs~~eil~~L  307 (620)
                      +..-.   ......+      .+| .-++++++.+..+|++.  ++.-||+++.-+..|
T Consensus       239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl  297 (637)
T COG4248         239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL  297 (637)
T ss_pred             hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence            11000   0011111      112 45789999999999964  356899988765533

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=9.6e-08  Score=106.90  Aligned_cols=148  Identities=18%  Similarity=0.169  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCcccccCCCC-----CCCCCC-CcCCCCCCCCcccccCCCC
Q 007046          155 DLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-----PSSDLP-RRLGTPNYMAPEQWQPEVR  227 (620)
Q Consensus       155 qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~-----~~~~~~-~~~GT~~YmAPE~~~~~~~  227 (620)
                      +.+.||.|+|.. ++||+.|.|++|.++.++..||+.|+++........     ...... -..-...|.|||++.+.  
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~--  184 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT--  184 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc--
Confidence            455999999976 799999999999999999999999998865543111     111111 11245689999999753  


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH--hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 007046          228 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV--RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL  304 (620)
Q Consensus       228 ~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~--~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil  304 (620)
                       ..+.++|+||||+.+|-+.. |+.-+........+....  .+-........+|+++++=+.+++..+..-||++..+.
T Consensus       185 -~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  185 -TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             -cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence             46678999999999999984 655555443322222111  11223345678999999999999999999999887776


Q ss_pred             H
Q 007046          305 R  305 (620)
Q Consensus       305 ~  305 (620)
                      .
T Consensus       264 ~  264 (700)
T KOG2137|consen  264 S  264 (700)
T ss_pred             c
Confidence            5

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.33  E-value=5.3e-06  Score=82.33  Aligned_cols=87  Identities=23%  Similarity=0.201  Sum_probs=68.6

Q ss_pred             eeEeEEEEEEC----CEEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          108 ICWLQGISVIN----GKICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       108 Iv~l~g~~~~~----~~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      ++..+++....    ...+||||+++|  +|.+.+...  ...+......++.+++..+.-||..||+|+||++.|||++
T Consensus        75 tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~  152 (206)
T PF06293_consen   75 TPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVD  152 (206)
T ss_pred             CCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEe
Confidence            44555555442    246899999997  455555431  2266777889999999999999999999999999999999


Q ss_pred             cCC---cEEEeccCCccc
Q 007046          182 EAD---RAVLGDVGIPHL  196 (620)
Q Consensus       182 ~~~---~vkL~DFGla~~  196 (620)
                      .++   .+.++||+.++.
T Consensus       153 ~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  153 PDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CCCCceeEEEEcchhcee
Confidence            887   899999997764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.27  E-value=4.2e-06  Score=85.17  Aligned_cols=135  Identities=21%  Similarity=0.205  Sum_probs=89.2

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-------------------hh-HH-HHHHHHHHHHHHH
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-------------------ED-RM-RVLLERLNDLFLK  101 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-------------------~~-~~-~~~~~~~~~~~l~  101 (620)
                      +.+...||-|-=+.||.|...       ++.++|||.=+...                   .. .. +...+++-+ .+.
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~-~L~  164 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFE-ALQ  164 (304)
T ss_pred             HhhccccccCccceEEEEECC-------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHH-HHH
Confidence            345678999999999999843       44689999743210                   00 00 111111211 333


Q ss_pred             ccCCC--ceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          102 CQGVE--GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       102 ~~~h~--nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      ++...  .|++.+++    +..++||||.+|-.+..+      +++....-.++..|++-+.-+-..|++|+|+++-||+
T Consensus       165 ~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIl  234 (304)
T COG0478         165 RLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNIL  234 (304)
T ss_pred             HhhhcCCCCCCcccc----ccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEE
Confidence            33322  45665554    567899999998433222      2234455566667777777777899999999999999


Q ss_pred             EccCCcEEEeccCCcc
Q 007046          180 LNEADRAVLGDVGIPH  195 (620)
Q Consensus       180 ld~~~~vkL~DFGla~  195 (620)
                      ++++|.+.++||-.+.
T Consensus       235 V~~dg~~~vIDwPQ~v  250 (304)
T COG0478         235 VTEDGDIVVIDWPQAV  250 (304)
T ss_pred             EecCCCEEEEeCcccc
Confidence            9999999999997654

>PRK09902 hypothetical protein; Provisional

Probab=98.25  E-value=3.3e-05  Score=76.64  Aligned_cols=138  Identities=13%  Similarity=0.013  Sum_probs=92.5

Q ss_pred             eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc------hhHHHHHHHHHHHH-HHHccCCCceeEeEEEEE-E---
Q 007046           49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRMRVLLERLNDL-FLKCQGVEGICWLQGISV-I---  117 (620)
Q Consensus        49 IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~------~~~~~~~~~~~~~~-~l~~~~h~nIv~l~g~~~-~---  117 (620)
                      -|+||.+-|+.....        ++.+=+|.-...-      ......+..+...+ .+...+-| +..+. ++. .   
T Consensus        26 ~~rgG~SgV~r~~~~--------g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pv-f~~~~k~~   95 (216)
T PRK09902         26 YRRNGMSGVQCVERN--------GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIV-FGEAVKIE   95 (216)
T ss_pred             cCCCCcceEEEEEeC--------CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccc-eeeeeccC
Confidence            367899999987532        1247788754211      11233444444322 23333444 55544 322 1   


Q ss_pred             -CCEEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc--EEEeccC
Q 007046          118 -NGKICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDVG  192 (620)
Q Consensus       118 -~~~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~--vkL~DFG  192 (620)
                       .-.-+||+|-++|  +|.+.+....-.+.+......++.+|+..|.-||+.|+.|+|+.+.|||++.++.  ++++||-
T Consensus        96 ~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlE  175 (216)
T PRK09902         96 GEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLE  175 (216)
T ss_pred             CceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence             1247899998884  6666664322345678888899999999999999999999999999999987777  9999998


Q ss_pred             Cccc
Q 007046          193 IPHL  196 (620)
Q Consensus       193 la~~  196 (620)
                      -++.
T Consensus       176 k~r~  179 (216)
T PRK09902        176 KSRR  179 (216)
T ss_pred             ccch
Confidence            6553

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.24  E-value=7.9e-06  Score=91.48  Aligned_cols=141  Identities=23%  Similarity=0.243  Sum_probs=87.6

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH------------------------------HHHHHH-
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR------------------------------VLLERL-   95 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~------------------------------~~~~~~-   95 (620)
                      .-|+.++-|.||+|+.+.       |+.||||+.++.-.....                              ++.+.. 
T Consensus       131 ~PiAsASIaQVH~A~L~s-------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~  203 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR  203 (517)
T ss_pred             CchhhhhHhhheeEEecC-------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence            458899999999999764       458999999863221110                              010000 


Q ss_pred             --------H---HHHHHcc-CCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHH-HHH
Q 007046           96 --------N---DLFLKCQ-GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG-ILQ  162 (620)
Q Consensus        96 --------~---~~~l~~~-~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~g-L~y  162 (620)
                              .   +.+.... +.++|.-..-+....+...|+|||++|--.+.+..++...++...+   +..++.+ +..
T Consensus       204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~i---a~~~~~~f~~q  280 (517)
T COG0661         204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKEL---AELLVRAFLRQ  280 (517)
T ss_pred             HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHH---HHHHHHHHHHH
Confidence                    0   0122222 3444333333333456788999999984444443334455554333   3322222 344


Q ss_pred             HHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       163 LHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +-..|++|.|..|.||+++.+|.+.+.|||+...+
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l  315 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL  315 (517)
T ss_pred             HHhcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence            44589999999999999999999999999997765

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.10  E-value=3e-05  Score=78.23  Aligned_cols=139  Identities=18%  Similarity=0.182  Sum_probs=90.7

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-----------------------HHHHHH-HHHHHHH
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-----------------------RVLLER-LNDLFLK  101 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-----------------------~~~~~~-~~~~~l~  101 (620)
                      ...|..|--+.||+|..       ..+..+|+|+.+.....-.                       ....++ +..+...
T Consensus        53 ~g~istGKEA~Vy~a~~-------~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~  125 (268)
T COG1718          53 VGCISTGKEANVYLAET-------GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRA  125 (268)
T ss_pred             EeeecCCcceEEEeecc-------CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34777888899999973       2345799999875321110                       111111 1111111


Q ss_pred             ccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEE
Q 007046          102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFIL  180 (620)
Q Consensus       102 ~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILl  180 (620)
                      ...+=.+++.+.+.    ...|||||++.. ..-.-.++..++...++..+..++++.+.-|-. .+++|+||+.-|||+
T Consensus       126 ~eAGVrvP~Pi~~~----~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~  200 (268)
T COG1718         126 YEAGVRVPEPIAFR----NNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV  200 (268)
T ss_pred             HHcCCCCCCceeec----CCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE
Confidence            12233444555443    357999999853 222222244455555788889999999988887 899999999999999


Q ss_pred             ccCCcEEEeccCCcccc
Q 007046          181 NEADRAVLGDVGIPHLL  197 (620)
Q Consensus       181 d~~~~vkL~DFGla~~~  197 (620)
                      . ++.+.|+|||-|...
T Consensus       201 ~-~~~p~iID~~QaV~~  216 (268)
T COG1718         201 H-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             E-CCeEEEEECcccccc
Confidence            9 899999999987644

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.90  E-value=0.00019  Score=71.74  Aligned_cols=141  Identities=15%  Similarity=0.119  Sum_probs=87.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHH-----HHHH-----HHHccCCCc
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER-----LNDL-----FLKCQGVEG  107 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~-----~~~~-----~l~~~~h~n  107 (620)
                      +-..+|.+.+.+-......|.+-.-        ++..+.+|..+......++.+...     ...+     .....+.-.
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei--------~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~   99 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI--------DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTE   99 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE--------CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccc
Confidence            4456788888888888877777652        224699999876543333333221     0111     111122233


Q ss_pred             eeEeEEEEEE-----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          108 ICWLQGISVI-----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       108 Iv~l~g~~~~-----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      ...++.+...     ....+|+|||++|--+..+.     .+++    .+...|.+++.-||+.|+.|+|..|.|+++..
T Consensus       100 ~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~-----~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  100 PADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIE-----DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             cccceeeeeeeeccceeEEEEEEEEecCeecccch-----hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC
Confidence            3333333221     23467999999983322211     1222    34567788899999999999999999999985


Q ss_pred             CCcEEEeccCCccc
Q 007046          183 ADRAVLGDVGIPHL  196 (620)
Q Consensus       183 ~~~vkL~DFGla~~  196 (620)
                       +.+++.||+..+.
T Consensus       171 -~~i~iID~~~k~~  183 (229)
T PF06176_consen  171 -NGIRIIDTQGKRM  183 (229)
T ss_pred             -CcEEEEECccccc
Confidence             4599999986543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.84  E-value=0.00034  Score=69.10  Aligned_cols=139  Identities=16%  Similarity=0.150  Sum_probs=71.7

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC-CceeEeEEEEE---ECCEE
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-EGICWLQGISV---INGKI  121 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h-~nIv~l~g~~~---~~~~~  121 (620)
                      ++.|+.|..+.||+.....        ..+++|.....   ........+...+..+..+ ..+.+++.+..   .....
T Consensus         2 i~~l~~G~~n~~~~v~~~~--------~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~   70 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--------GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFP   70 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--------SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEE
T ss_pred             CccCCCCCeeeEEEEEECC--------cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccc
Confidence            4689999999999998543        26999998655   1111222222222111111 13566666443   34568


Q ss_pred             EEEEecCCCChHHH-----------------HHHhcC-----CCCCHHH---------HHHH------------HHHHHH
Q 007046          122 CIIMKFYEGSVGDR-----------------MAQLKG-----GKLSLSN---------VFRY------------AIDLAQ  158 (620)
Q Consensus       122 ~IVmE~~~GsLld~-----------------l~~~~~-----~~l~~~~---------~~~i------------~~qIa~  158 (620)
                      +++|++++|.....                 +..+..     .++....         ....            ...+..
T Consensus        71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (239)
T PF01636_consen   71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE  150 (239)
T ss_dssp             EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence            99999999854433                 111101     1111100         0000            111222


Q ss_pred             -HHHHHHH-------CCCeeecccCCcEEEc-cCCcEEEeccCCcc
Q 007046          159 -GILQLHS-------KGILVLNLKPFNFILN-EADRAVLGDVGIPH  195 (620)
Q Consensus       159 -gL~yLHs-------~gIiHrDLKP~NILld-~~~~vkL~DFGla~  195 (620)
                       .+..+++       ..++|+|+.|.|||++ +++.+.|+||+.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence             3333332       3499999999999999 66667899999764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.84  E-value=0.00025  Score=71.55  Aligned_cols=135  Identities=16%  Similarity=0.112  Sum_probs=74.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC-CceeEeEEEEEECCEEEEEE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-EGICWLQGISVINGKICIIM  125 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h-~nIv~l~g~~~~~~~~~IVm  125 (620)
                      ..||+|.-+.||+..    +      ..+++|..+......  .. .++.+.+..+... -.+.+.+++....+...+||
T Consensus         7 ~~i~~G~t~~~y~~~----~------~~~VlR~~~~~~~~~--~i-~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~   73 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----T------GKWMLKLYNPGFDKE--TI-KREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIY   73 (226)
T ss_pred             eeecCCCCcceeEec----C------CCEEEEeCCCCCCHH--HH-HHHHHHHHHHHHcCCCCCceEEEEecCCeeeeee
Confidence            578999999999841    1      247899987643221  11 2222222222222 22566777777778889999


Q ss_pred             ecCCCCh-H---------------HHHHH----hcCC---CCCHHHHH-HHHH----------HHHH-HHHHHHHC----
Q 007046          126 KFYEGSV-G---------------DRMAQ----LKGG---KLSLSNVF-RYAI----------DLAQ-GILQLHSK----  166 (620)
Q Consensus       126 E~~~GsL-l---------------d~l~~----~~~~---~l~~~~~~-~i~~----------qIa~-gL~yLHs~----  166 (620)
                      |+++|.. .               ..+..    +..-   ........ .+..          .+.. ...+|...    
T Consensus        74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  153 (226)
T TIGR02172        74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS  153 (226)
T ss_pred             eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence            9999841 1               11111    1111   11111110 1100          1111 12222211    


Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+|+.|.||++++++ +.|+||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            378999999999999888 9999999764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.78  E-value=0.00014  Score=81.48  Aligned_cols=141  Identities=16%  Similarity=0.188  Sum_probs=87.8

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHH------------------------------------
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV------------------------------------   90 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~------------------------------------   90 (620)
                      +-||.-+.|.||+|+.+.       |..||||+-++.-.+....                                    
T Consensus       167 ~piaaASlaQVhrA~L~~-------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~EL  239 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQEL  239 (538)
T ss_pred             chhhhcchhheEEEEecC-------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhc
Confidence            458999999999999765       4579999988642221100                                    


Q ss_pred             -HHHHH--HHHHHHccCCCc------eeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 007046           91 -LLERL--NDLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL  161 (620)
Q Consensus        91 -~~~~~--~~~~l~~~~h~n------Iv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~  161 (620)
                       +..+.  .+.+.+...|-+      |++++..+  .....|+||||+|--.+.+..+....++...+...+.+..  ++
T Consensus       240 DF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~--~~  315 (538)
T KOG1235|consen  240 DFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAY--LE  315 (538)
T ss_pred             chHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHH--HH
Confidence             00010  111333333433      44444333  4568899999998433333434555667665544444322  22


Q ss_pred             HHHHCCCeeecccCCcEEEcc----CCcEEEeccCCccccc
Q 007046          162 QLHSKGILVLNLKPFNFILNE----ADRAVLGDVGIPHLLL  198 (620)
Q Consensus       162 yLHs~gIiHrDLKP~NILld~----~~~vkL~DFGla~~~~  198 (620)
                      -|-..|++|.|=.|.||++..    ++.+.+.|||+...+.
T Consensus       316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             HHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            333568999999999999984    5789999999987653

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.67  E-value=0.00028  Score=83.68  Aligned_cols=190  Identities=13%  Similarity=0.078  Sum_probs=125.7

Q ss_pred             HHHHccCCCceeEeEEEEEECCE----EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeec
Q 007046           98 LFLKCQGVEGICWLQGISVINGK----ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN  172 (620)
Q Consensus        98 ~~l~~~~h~nIv~l~g~~~~~~~----~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrD  172 (620)
                      ..+....|+|++.++.|......    ..+..|+|.+ ++.+.+.  .-+.++....+.+..++.+||.|+|+....|.-
T Consensus       234 ~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~  311 (1351)
T KOG1035|consen  234 ESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSLSLEHVV  311 (1351)
T ss_pred             HHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHhccceeE
Confidence            35666789999999988765432    2344566664 4444443  346788999999999999999999999766665


Q ss_pred             ccCC---cEEEccCCcEEEe--ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHH
Q 007046          173 LKPF---NFILNEADRAVLG--DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML  247 (620)
Q Consensus       173 LKP~---NILld~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ell  247 (620)
                      |...   +-..+..+.+.++  ||+..+.+.+...    .....-+..|.++|..... ....+...|+|.+|..+..+.
T Consensus       312 L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~----~~~~~~~~~~~~~e~~~~~-~~~~~r~~dL~~lgll~~~~~  386 (1351)
T KOG1035|consen  312 LSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK----SFSDLLAEIRNADEDLKEN-TAKKSRLTDLWCLGLLLLQLS  386 (1351)
T ss_pred             EecccccccccCccceeecchhhhcccccCCCccc----chhhcCccccccccccccc-cchhhhhhHHHHHHHHHhhhh
Confidence            5555   4444555666666  8888776643211    1122344557788876543 223445579999999999998


Q ss_pred             hCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          248 TGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       248 tG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .|..+-...   .....+        ++........+...+|+.-++++|++..+++.
T Consensus       387 ~~~~i~~~~---~~~~~~--------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  387 QGEDISEKS---AVPVSL--------LDVLSTSELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             hcCcccccc---cchhhh--------hccccchhhhhhhhhhcchhhhhccchhhhhh
Confidence            876542110   011111        12222237788999999999999999999987

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.64  E-value=0.00047  Score=69.75  Aligned_cols=29  Identities=14%  Similarity=-0.036  Sum_probs=25.6

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            38999999999999987778899999664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.62  E-value=6.9e-06  Score=91.44  Aligned_cols=204  Identities=19%  Similarity=0.115  Sum_probs=136.2

Q ss_pred             hhhhccCCCCCCCcCC--CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHc
Q 007046           25 RTAVATSNDTNAWIKP--SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC  102 (620)
Q Consensus        25 ~~~~~~s~~~~~~I~~--~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~  102 (620)
                      ...+-.|...++.++-  .-+...+..++|+++.++|.+...+.       ....+++...       ...+....++..
T Consensus       224 l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaek-------lL~h~fvs~~-------l~~rl~~eLLdK  289 (829)
T KOG0576|consen  224 LFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEK-------LLQHPFVSQT-------LSRRLAIELLDK  289 (829)
T ss_pred             HHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhh-------heeceeeccc-------hhhHHHHHHHHH
Confidence            3344445554554433  23566678999999999999754433       2335555322       223333346666


Q ss_pred             cCCCc-eeEeEEEEEECCEEEEEEecCCCC--hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          103 QGVEG-ICWLQGISVINGKICIIMKFYEGS--VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       103 ~~h~n-Iv~l~g~~~~~~~~~IVmE~~~Gs--Lld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      .+||| .+..++-+..+...+|.|+++.+.  ..+.... ..-.+..-....+.+.-+.+|+|||+.-=+|||    |||
T Consensus       290 ~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l  364 (829)
T KOG0576|consen  290 VNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NIL  364 (829)
T ss_pred             ccCCCCcccccccCCcccccchhhhhhcCCccccccCCh-hhHhhhhhhhhhhhhhhcccccccccccccCcc----ccc
Confidence            78999 777777777788899999999853  2222210 111222233344455667889999998888998    777


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      ..+ +..+..||+....+...    ....+..+|+.++|||....   ..+....|.|+++.--.+|.-|.+|-..
T Consensus       365 ~s~-~~~~~~~~~v~~~L~~~----~~~~t~~~~~~~~~pev~~~---~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  365 GSE-EEVKLLDFAVPPQLTRT----MKPRTAIGTPEPLAPEVIQE---NTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             ccc-cccccccccCCcccCcc----cccccCCCCCCCCCchhhcc---cccccCCCccCCCcchhhcCCCCCCCCC
Confidence            664 77899999988776432    23456789999999998753   3677788999999887788888777543

>PLN02876 acyl-CoA dehydrogenase

Probab=97.52  E-value=0.00082  Score=80.30  Aligned_cols=83  Identities=14%  Similarity=0.106  Sum_probs=49.5

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc--eeEeEEEEEEC---C
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG--ICWLQGISVIN---G  119 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n--Iv~l~g~~~~~---~  119 (620)
                      -.++|+.|.+..+|+......+    ....+++|+..............++...+..+..|.+  +++++.+|.+.   +
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~----~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G  117 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGG----SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIG  117 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCC----cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCC
Confidence            3577899999999998753221    1135788876543221112223333333333333444  47777877653   4


Q ss_pred             EEEEEEecCCCC
Q 007046          120 KICIIMKFYEGS  131 (620)
Q Consensus       120 ~~~IVmE~~~Gs  131 (620)
                      ..|+||||++|.
T Consensus       118 ~~flVME~v~G~  129 (822)
T PLN02876        118 TAFYIMEYLEGR  129 (822)
T ss_pred             CceEEEEecCCc
Confidence            678999999985

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.51  E-value=0.0025  Score=62.93  Aligned_cols=127  Identities=20%  Similarity=0.221  Sum_probs=85.0

Q ss_pred             CCeeEEeeeeccCc-eEEEEEEEcCCCcCCCcceEEEEEEecC---Cc--------hhHH---------HHHHHHHHHH-
Q 007046           41 SALKLRHRIGRGPF-GEVWLATHYLSTEDCDEYHEVAVKILHP---VK--------EDRM---------RVLLERLNDL-   98 (620)
Q Consensus        41 ~~y~i~~~IG~G~f-G~Vyka~~~~t~ed~~~~~~VAIK~l~~---~~--------~~~~---------~~~~~~~~~~-   98 (620)
                      .+++.++.||.|.- |.||++...        ++.||+|+.+.   ..        ....         ..-+..+.+. 
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--------g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAf  108 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--------GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAF  108 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--------CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhh
Confidence            78999999999999 999999853        35799999321   00        0000         0011122222 


Q ss_pred             -HHHccCCCce--eEeEEEEEEC------------------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHH
Q 007046           99 -FLKCQGVEGI--CWLQGISVIN------------------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA  157 (620)
Q Consensus        99 -~l~~~~h~nI--v~l~g~~~~~------------------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa  157 (620)
                       .++..++.++  |+++||..-.                  ....||.||.+..-          .+.    ..-+.+|.
T Consensus       109 gRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~----~~~~~~~~  174 (207)
T PF13095_consen  109 GRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQ----IRDIPQML  174 (207)
T ss_pred             HHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccc----hhHHHHHH
Confidence             2344566666  9999987432                  12467888876422          112    33356788


Q ss_pred             HHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       158 ~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +-|..+|..||+-+|+++.|..     .-+|+|||.+
T Consensus       175 ~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  175 RDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            8899999999999999999987     3478999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.38  E-value=0.0034  Score=62.12  Aligned_cols=131  Identities=21%  Similarity=0.284  Sum_probs=87.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-------------------hhHHHHHHHHHHHHH-HHccCCC
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-------------------EDRMRVLLERLNDLF-LKCQGVE  106 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-------------------~~~~~~~~~~~~~~~-l~~~~h~  106 (620)
                      ..||+|+.=.||.--   ..      ...+||+..+..                   ......+......+. .....+.
T Consensus         7 ~~i~~G~~R~cy~HP---~d------p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~   77 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP---DD------PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWS   77 (199)
T ss_pred             cccccCCCceEEECC---CC------CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccc
Confidence            569999999998631   11      247999998766                   222222333332222 3344678


Q ss_pred             ceeEeEEEEEECCEEEEEEecCC---CC----hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          107 GICWLQGISVINGKICIIMKFYE---GS----VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       107 nIv~l~g~~~~~~~~~IVmE~~~---Gs----Lld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      +|.+++|+.+++.-.-+|+|...   |+    |.+++   +.+.++.    .+...+-+-..||-+.+|+.+||+|.||+
T Consensus        78 ~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l---~~~~~~~----~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv  150 (199)
T PF10707_consen   78 HIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL---KEGGLTE----ELRQALDEFKRYLLDHHIVIRDLNPHNIV  150 (199)
T ss_pred             ccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH---HcCCccH----HHHHHHHHHHHHHHHcCCeecCCCcccEE
Confidence            89999999999888889999874   32    33333   3445555    33444455567888999999999999999


Q ss_pred             EccCC----cEEEec-cCC
Q 007046          180 LNEAD----RAVLGD-VGI  193 (620)
Q Consensus       180 ld~~~----~vkL~D-FGl  193 (620)
                      +..+.    .+.|+| ||-
T Consensus       151 ~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  151 VQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             EEecCCCceEEEEEeCCCC
Confidence            96542    467777 564

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.38  E-value=0.00089  Score=64.47  Aligned_cols=131  Identities=18%  Similarity=0.197  Sum_probs=80.1

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      ..+..+.|++|.+|.||++.+...        .+|+|+-+.++.-..   ++.+.+++..+..-.--.+++.+.    ..
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~~~--------~~a~Kvrr~ds~r~~---l~kEakiLeil~g~~~~p~vy~yg----~~   87 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWRGG--------EVALKVRRRDSPRRN---LEKEAKILEILAGEGVTPEVYFYG----ED   87 (201)
T ss_pred             hhhhhhhhhcccccEEEEeeccCc--------eEEEEEecCCcchhh---HHHHHHHHHHhhhcCCCceEEEec----hh
Confidence            355668899999999999987543        699999876654322   222222222222222334455543    34


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccC-CcEEEccCCcEEEeccCCccc
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKP-FNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP-~NILld~~~~vkL~DFGla~~  196 (620)
                      ++.|||+.| .|.+....   .  +-    +-+..+++.---|-..||-|..|.- ..++|-.++.+.|+||-.|++
T Consensus        88 ~i~me~i~G~~L~~~~~~---~--~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          88 FIRMEYIDGRPLGKLEIG---G--DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhhhhhhcCcchhhhhhc---c--cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            567999998 44433321   0  22    2233455554556677999999974 444444455999999998764

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.23  E-value=0.0045  Score=60.66  Aligned_cols=92  Identities=20%  Similarity=0.162  Sum_probs=69.4

Q ss_pred             ccCCCceeEeEEEEEECCEEEEEEecCC-CChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeecccCC
Q 007046          102 CQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPF  176 (620)
Q Consensus       102 ~~~h~nIv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~-~~~~l~~~~~~~i~~qIa~gL~yLHs---~gIiHrDLKP~  176 (620)
                      ..+.+++++++|+|-   . ++|+||.+ +++......+ .--.-++..+.+++.++++.+++|+.   ..+.-.|++|+
T Consensus        16 l~~~~~~pk~lG~CG---~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~   91 (188)
T PF12260_consen   16 LQGSEPFPKLLGSCG---R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPD   91 (188)
T ss_pred             cCCCCCCCCeeeECC---C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchH
Confidence            334469999999983   2 56889998 4443211000 01235899999999999999999998   35788899999


Q ss_pred             cEEEccCCcEEEeccCCcccc
Q 007046          177 NFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       177 NILld~~~~vkL~DFGla~~~  197 (620)
                      |+-+++++++|+.|...+...
T Consensus        92 nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   92 NFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             HeEEeCCCcEEEEechhcchh
Confidence            999999999999999876543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK05231 homoserine kinase; Provisional

Probab=96.97  E-value=0.018  Score=60.64  Aligned_cols=29  Identities=14%  Similarity=0.104  Sum_probs=25.1

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +++|+|+.|.|||++.+...-|+||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        188 GVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            79999999999999966556899999754

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.93  E-value=0.0036  Score=63.10  Aligned_cols=29  Identities=17%  Similarity=0.181  Sum_probs=24.7

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+|+.|.|||++.+...-|+||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            48999999999999876556799999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.52  E-value=0.03  Score=58.83  Aligned_cols=40  Identities=18%  Similarity=0.224  Sum_probs=31.3

Q ss_pred             HHHHHHHHHH-------CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          156 LAQGILQLHS-------KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       156 Ia~gL~yLHs-------~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +...++++..       .+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       170 l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       170 LDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             HHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            3345555643       579999999999999988777899999653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.47  E-value=0.031  Score=55.99  Aligned_cols=29  Identities=21%  Similarity=0.062  Sum_probs=25.8

Q ss_pred             CCeeecccCCcEEEcc-CCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNE-ADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~-~~~vkL~DFGla~  195 (620)
                      .++|+|+.+.|||++. ++.+.|+||-.|.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            5899999999999998 5789999998764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.19  E-value=0.045  Score=56.92  Aligned_cols=29  Identities=14%  Similarity=0.151  Sum_probs=25.8

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +++|+|+.|.|||++.++.+.|.||+.+.
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            69999999999999987777899999653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK10593 hypothetical protein; Provisional

Probab=96.04  E-value=0.1  Score=54.87  Aligned_cols=79  Identities=9%  Similarity=0.069  Sum_probs=47.3

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC--CceeEeEEEEEE--
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV--EGICWLQGISVI--  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h--~nIv~l~g~~~~--  117 (620)
                      ...-.+.||.|..+.||+.....        ..+.+|..+.....   .....+...+..+..+  -.++++++++..  
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~--------~~~~~k~~~~~~~~---~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~   83 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQ--------GNPMPLMARSFSTP---GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ   83 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCC--------CCEEEEEecccccc---hHHHHHHHHHHHHccCCCCCcCcEEEEeccCC
Confidence            34556789999999999985321        13677875431111   1222222222222232  357788887754  


Q ss_pred             -CCEEEEEEecCCCC
Q 007046          118 -NGKICIIMKFYEGS  131 (620)
Q Consensus       118 -~~~~~IVmE~~~Gs  131 (620)
                       .+..+||||+++|.
T Consensus        84 ~~g~~~LVmE~i~G~   98 (297)
T PRK10593         84 SPGPDVLLLERLRGV   98 (297)
T ss_pred             cCCCeEEEEeccCCE
Confidence             36789999999974

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.00  E-value=0.0012  Score=80.21  Aligned_cols=249  Identities=12%  Similarity=-0.075  Sum_probs=145.0

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHH-HH--HHHccCCCceeEeEEEEEE-
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN-DL--FLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~-~~--~l~~~~h~nIv~l~g~~~~-  117 (620)
                      ++++.--||-|.+   +++.+....-+     -+.+|+.+....+...+-+.++. ..  ..+...|+++.....-... 
T Consensus      1230 ~~EV~l~i~~~~~---~R~k~Lr~kid-----~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps 1301 (2724)
T KOG1826|consen 1230 HSEVNLGISNHFH---FRNKWLRSKID-----WFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPS 1301 (2724)
T ss_pred             hhheeeeccccee---eccchHhhhhc-----eeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCC
Confidence            3444444554444   34554433322     24566665444333333333221 00  1222356665544332221 


Q ss_pred             -CCEEEEEEecCC-CChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeecccCCcEEEccCCcEEE
Q 007046          118 -NGKICIIMKFYE-GSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       118 -~~~~~IVmE~~~-GsLld~l~~~~~--~~l~~~~~~~i~~qIa~gL~yLHs~g-----IiHrDLKP~NILld~~~~vkL  188 (620)
                       ....+++++|+. |.+.+.+.+...  ..+...-+...-.+.+.+..-+|+..     -+|++||+-|.+|..+.++|+
T Consensus      1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~ 1381 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKL 1381 (2724)
T ss_pred             CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccc
Confidence             234688999998 667776654322  33333344444444477777777652     799999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +++|+.+...   ..........+++-|+.|++.+..   .++.++|+|..++.+|+...|..+|..... ..++.+...
T Consensus      1382 gk~gLdKIkn---p~~sf~Gl~l~sp~~v~qli~N~i---k~t~rsdilr~s~~ly~rs~~n~~fi~flq-~~Lkgiidn 1454 (2724)
T KOG1826|consen 1382 GKGGLDKIKN---PVLSFFGLELCSPIYVLQLIKNEI---KFTKRSDILRRSLSLYLRSDGNAYFIFFLQ-PALKGIIDN 1454 (2724)
T ss_pred             cccccccccC---chHhhhhhhhCCHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHhcccHHHHHHHH-HHHcCcccc
Confidence            9999998321   112334456788899999987633   577789999999999999989887643222 222223333


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....++.-.|.+.-.....+|-..-..||.-..++.
T Consensus      1455 ~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls 1491 (2724)
T KOG1826|consen 1455 HTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLS 1491 (2724)
T ss_pred             cccccccccCCCcccHHHHHHHHHHhhhcchhhhhcc
Confidence            3333444444555444444444445567777665543

>TIGR02721 ycfN_thiK thiamine kinase

Probab=95.98  E-value=0.03  Score=57.09  Aligned_cols=28  Identities=14%  Similarity=0.247  Sum_probs=24.7

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+|+.|.||+++.++ +.|+||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            489999999999999876 7899999764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.98  E-value=0.22  Score=54.56  Aligned_cols=76  Identities=12%  Similarity=0.015  Sum_probs=44.2

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---h----HHHHHHHHHHHHHHHc--cCCCceeEeEEEEE
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---D----RMRVLLERLNDLFLKC--QGVEGICWLQGISV  116 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~----~~~~~~~~~~~~~l~~--~~h~nIv~l~g~~~  116 (620)
                      .+.||.|.+..||++.....      .+.|.||.-.+...   +    ....... +.+.+...  ....++++++.+. 
T Consensus        31 ~~elggGn~N~VyrV~~~~g------~~svIVKqa~p~~r~~g~~wpl~~eR~~~-Eae~L~~l~~~~p~~VPkV~~~D-  102 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEG------GKSVIVKQALPYVRVVGESWPLTLDRARI-EAEALKIQAKYVPDLVPKVYHYD-  102 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCC------CeEEEEEecCcccccccccccccHHHHHH-HHHHHHHHHhhCCCCCCeEEEEC-
Confidence            46799999999999986322      13699998542210   0    1111111 11122221  1224577777763 


Q ss_pred             ECCEEEEEEecCCC
Q 007046          117 INGKICIIMKFYEG  130 (620)
Q Consensus       117 ~~~~~~IVmE~~~G  130 (620)
                       .+..++|||++++
T Consensus       103 -~~~~~lVME~L~~  115 (401)
T PRK09550        103 -EELAVTVMEDLSD  115 (401)
T ss_pred             -CCCCEEEEecCCC
Confidence             4557899999985

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.92  E-value=0.058  Score=56.35  Aligned_cols=29  Identities=21%  Similarity=0.132  Sum_probs=25.8

Q ss_pred             CCeeecccCCcEEEccC----CcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEA----DRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~----~~vkL~DFGla~  195 (620)
                      .++|+|+.|.|||++.+    +.+.++||..|.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            48999999999999975    889999999764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.92  E-value=0.071  Score=57.08  Aligned_cols=142  Identities=19%  Similarity=0.191  Sum_probs=86.6

Q ss_pred             eEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCC------------------------chhHH-HHHHHHHHHH
Q 007046           44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV------------------------KEDRM-RVLLERLNDL   98 (620)
Q Consensus        44 ~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~------------------------~~~~~-~~~~~~~~~~   98 (620)
                      .|-.+|..|--+.||.|+.       ..|..+|||+.+..                        ..-.+ ..+.+.+...
T Consensus       147 ~inGCiSTGKEANVYHat~-------~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RN  219 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-------EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRN  219 (520)
T ss_pred             ecccccccCccceeEeeec-------CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHH
Confidence            3456788999999999863       23456999998631                        00111 1122222212


Q ss_pred             HHHccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeecccCCc
Q 007046           99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFN  177 (620)
Q Consensus        99 ~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH-s~gIiHrDLKP~N  177 (620)
                      +. .++..+|.-.--+..  ....|||+|+.++-. -.-.++.-.++...+..+-.|++.-+.-|- ..+++|.||.--|
T Consensus       220 Lk-Rl~~aGIP~PePIlL--k~hVLVM~FlGrdgw-~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  220 LK-RLNNAGIPCPEPILL--KNHVLVMEFLGRDGW-AAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             HH-HHHhcCCCCCCceee--ecceEeeeeccCCCC-cCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            22 222222221111111  124699999984211 111235667888888888778877777665 5689999999999


Q ss_pred             EEEccCCcEEEeccCCcccc
Q 007046          178 FILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~  197 (620)
                      +|+- +|.+.|+|.+-+...
T Consensus       296 ~Lyh-dG~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  296 LLYH-DGKLYIIDVSQSVEH  314 (520)
T ss_pred             heEE-CCEEEEEEccccccC
Confidence            9876 689999999976543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=95.06  E-value=0.021  Score=60.11  Aligned_cols=134  Identities=16%  Similarity=0.206  Sum_probs=83.9

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCC--c---------------hhHHHHH----HHHHHHHHHH
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--K---------------EDRMRVL----LERLNDLFLK  101 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~--~---------------~~~~~~~----~~~~~~~~l~  101 (620)
                      +.+.++||-|--+.||.+-+.       .|.+.++|.-+..  +               ...+..+    ..++- .+++
T Consensus        94 ~svGnqIGVGKESDIY~v~d~-------~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEf-afmk  165 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE-------EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEF-AFMK  165 (465)
T ss_pred             hhhccccccccccceEEEecC-------CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHH-HHHH
Confidence            567788999999999999642       3457888863210  0               0011111    01111 1233


Q ss_pred             cc-CCCc-eeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          102 CQ-GVEG-ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       102 ~~-~h~n-Iv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      .+ .|.. |++.+++    +..|+|||++.|--+....+       ...+-.+...+..-+.-|..+|+||+|..--||+
T Consensus       166 aL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNim  234 (465)
T KOG2268|consen  166 ALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRH-------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIM  234 (465)
T ss_pred             HHHHcCCCCCCcccc----cceeeHHHhhcccceeeeee-------cCChHHHHHHHHHHHHHHHHcCceecccchheeE
Confidence            22 2222 4444443    46799999998732222211       1223345556666777888999999999999999


Q ss_pred             EccCCcEEEeccCCcc
Q 007046          180 LNEADRAVLGDVGIPH  195 (620)
Q Consensus       180 ld~~~~vkL~DFGla~  195 (620)
                      +++++.++++||--+.
T Consensus       235 v~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  235 VKDDDKIVVIDFPQMV  250 (465)
T ss_pred             EecCCCEEEeechHhh
Confidence            9999999999997543

>PLN02236 choline kinase

Probab=94.72  E-value=0.38  Score=51.61  Aligned_cols=29  Identities=17%  Similarity=0.183  Sum_probs=25.3

Q ss_pred             CCeeecccCCcEEEcc-CCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNE-ADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~-~~~vkL~DFGla~  195 (620)
                      .++|+||++.|||+++ ++.+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            4899999999999986 4689999998764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.58  E-value=0.42  Score=51.60  Aligned_cols=28  Identities=14%  Similarity=0.116  Sum_probs=23.5

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+||.+.||+++.+ .++++|+.++.
T Consensus       193 ~llHGDl~~gNi~~~~~-~~~~iD~e~~~  220 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEH-ETKVIDPEFAF  220 (370)
T ss_pred             eeeeccCCcccEEEcCC-CCEEEcCcccc
Confidence            58999999999999765 47799998664

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.37  E-value=0.54  Score=51.59  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=44.5

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--------hHHHHHHHHHHHH-HHHccCCCceeEeEEEE
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--------DRMRVLLERLNDL-FLKCQGVEGICWLQGIS  115 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--------~~~~~~~~~~~~~-~l~~~~h~nIv~l~g~~  115 (620)
                      -.+.||.|.-..||+....        +..|.||.-.+...        ...+...+ ...+ ........++++++.++
T Consensus        36 ~~~eiggGn~N~VyrV~~~--------~~svVVKqa~p~~r~vga~wpl~~~R~~~E-a~aL~~~~~~~p~~VPkVy~~d  106 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--------SGSFVIKQALPYIRCIGESWPMTKERAYFE-ATALREHGRLCPDHVPEVYHFD  106 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--------CccEEEEeCCccccCCCccccCCccHHHHH-HHHHHHhhhcCCCCCCeEEEEC
Confidence            4678999999999998741        13589998652111        11121111 1111 11111224788888887


Q ss_pred             EECCEEEEEEecCCC
Q 007046          116 VINGKICIIMKFYEG  130 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G  130 (620)
                      .  +..+++||++++
T Consensus       107 e--d~~vlvME~L~~  119 (418)
T PLN02756        107 R--TMALIGMRYLEP  119 (418)
T ss_pred             C--CCCEEEEeecCC
Confidence            5  457889999976

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.02  E-value=1  Score=47.30  Aligned_cols=29  Identities=10%  Similarity=0.085  Sum_probs=26.6

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +++|+|+.+.|+|++.++.+.++||-.+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            69999999999999999999999998764

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.96  E-value=0.15  Score=56.76  Aligned_cols=146  Identities=22%  Similarity=0.370  Sum_probs=86.4

Q ss_pred             HHHccCCCceeEeEEEEEE-CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046           99 FLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus        99 ~l~~~~h~nIv~l~g~~~~-~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      +++...|+|.+.++++... .....+|||+++-++.|.+....   +-...       +.       .+++.|     -|
T Consensus        35 ~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~---l~~~s-------~~-------~~~~~~-----~~   92 (725)
T KOG1093|consen   35 YLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN---LKDES-------LL-------AHGVLH-----LN   92 (725)
T ss_pred             HHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc---cchhh-------hc-------ccccce-----eh
Confidence            5566789999999888653 34588999999999988876421   11111       00       222222     12


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  257 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~  257 (620)
                      +       .+++|    .+...                |  |-        +..+++|||++|.++.++.-|..-+....
T Consensus        93 ~-------~~~td----~~~t~----------------~--~~--------~~~pKsdVwsl~~i~~el~L~~~l~~~~~  135 (725)
T KOG1093|consen   93 I-------IYITD----HFLTK----------------Y--PS--------PIGPKSDVWSLGFIILELYLGISLEAELT  135 (725)
T ss_pred             h-------hhccc----ccccc----------------C--CC--------CCCcchhhhhHHHHHHHHHHhhHHHHHHH
Confidence            2       22333    01100                0  11        11248999999999999999987776655


Q ss_pred             HHHHHHHHHhccCCCC----------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHH
Q 007046          258 VDEIYDAVVRRQEIPP----------IPSGLPPAVENVLLGCFEYDLRSRPLMTDI  303 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~----------~p~~~s~~l~~Li~~cL~~dP~~RPs~~ei  303 (620)
                      ..+....+.+-...+.          +-..++..+..+...|+-..|..||...++
T Consensus       136 ~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  136 ESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL  191 (725)
T ss_pred             HHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence            5554444432221111          112345667788899999999988865444

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.44  E-value=0.2  Score=53.64  Aligned_cols=73  Identities=12%  Similarity=0.027  Sum_probs=57.7

Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..+.|++|++..+.+. .+     .....++++.++.+.+..++-+..+ .+=||||.-.||||+ +|+|.|+||-++|.
T Consensus       298 ~~y~yl~~kdhgt~is-~i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         298 TLYLYLHFKDHGTPIS-II-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ceEEEEEEecCCceee-ee-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            3467889998776543 11     1235678888888888888777765 699999999999999 99999999999985


Q ss_pred             c
Q 007046          197 L  197 (620)
Q Consensus       197 ~  197 (620)
                      -
T Consensus       371 ~  371 (488)
T COG5072         371 S  371 (488)
T ss_pred             c
Confidence            3

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=93.41  E-value=0.94  Score=48.28  Aligned_cols=28  Identities=21%  Similarity=0.160  Sum_probs=24.6

Q ss_pred             CeeecccCCcEEEcc-CCcEEEeccCCcc
Q 007046          168 ILVLNLKPFNFILNE-ADRAVLGDVGIPH  195 (620)
Q Consensus       168 IiHrDLKP~NILld~-~~~vkL~DFGla~  195 (620)
                      ++|.||.+.|||+++ ++.++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            799999999999975 5789999999764

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=92.84  E-value=1.8  Score=45.45  Aligned_cols=79  Identities=13%  Similarity=0.080  Sum_probs=42.1

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      .+-.+.|+.|....+|+..  .      .++.+-||+-..........+.+-+.  .+.....-.+++++++....+..|
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~------~~~~~FvK~~~~~~~~~f~~Ea~gL~--~L~~~~~~~vP~vi~~G~~~~~~f   88 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--T------DGGSYFVKVNSESGRDMFEGEAEGLK--ALAEANPIRVPKVIAWGEYDDDAF   88 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--T------TS-EEEEEEEEGGGCCHHHHHHHHHH--HHCHTTTSBS--EEEEEE-SSCCE
T ss_pred             eeeeEecCCCChhheEEEE--C------CCccEEEEecChhhHHHHHHHHHHHH--HHHhcCCCCCCeEEEEEeecCCce
Confidence            5567889999999999986  2      22479999986333222222222221  222234456888999888877789


Q ss_pred             EEEecCCCC
Q 007046          123 IIMKFYEGS  131 (620)
Q Consensus       123 IVmE~~~Gs  131 (620)
                      |||||++..
T Consensus        89 Llle~l~~~   97 (288)
T PF03881_consen   89 LLLEFLEMG   97 (288)
T ss_dssp             EEEE-----
T ss_pred             EEEEeecCC
Confidence            999998743

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=92.39  E-value=4.3  Score=43.14  Aligned_cols=27  Identities=15%  Similarity=0.016  Sum_probs=23.1

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +++|+|+.+.|||++ + .+.|+||+-+.
T Consensus       197 ~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        197 LRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             cceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            689999999999995 4 67899999654

>PRK06148 hypothetical protein; Provisional

Probab=92.20  E-value=2  Score=52.87  Aligned_cols=30  Identities=20%  Similarity=0.335  Sum_probs=25.3

Q ss_pred             CCCeeecccCCcEEEccCC--cEE-EeccCCcc
Q 007046          166 KGILVLNLKPFNFILNEAD--RAV-LGDVGIPH  195 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~--~vk-L~DFGla~  195 (620)
                      .++||.|+.+.|||++.++  .+. |+|||-+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4799999999999999875  555 99999764

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.18  E-value=0.31  Score=52.96  Aligned_cols=60  Identities=17%  Similarity=0.148  Sum_probs=38.6

Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeecccCCcEEEccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH-s~gIiHrDLKP~NILld~~  183 (620)
                      ..|+-+|..| ++...+   +....++....+++.-.+.||.-+- -.+++|.||.|.||++-.+
T Consensus       320 ~vl~E~~~~Gl~v~~~v---~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFV---KWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             ceeeeeccccccHHhhh---hcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            4566667777 333333   3334455566666666666654443 4589999999999999544

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.80  E-value=1.8  Score=45.95  Aligned_cols=29  Identities=17%  Similarity=0.253  Sum_probs=26.7

Q ss_pred             CeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          168 ILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       168 IiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++|+|+.+.||+++..+-+-+.||+++..
T Consensus       200 lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         200 LVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             eeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            79999999999999988899999998764

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.19  E-value=1.7  Score=45.07  Aligned_cols=29  Identities=21%  Similarity=0.206  Sum_probs=24.4

Q ss_pred             CCeeecccCCcEEEccCCc-EEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADR-AVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~-vkL~DFGla~  195 (620)
                      .++|+|+.|.|||++.++. .-|.||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            3899999999999997555 4699999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PTZ00384 choline kinase; Provisional

Probab=90.45  E-value=3.1  Score=45.41  Aligned_cols=29  Identities=10%  Similarity=-0.160  Sum_probs=23.5

Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..++|.||-+.|||.+ ++.+.++||-.|.
T Consensus       227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~  255 (383)
T PTZ00384        227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAG  255 (383)
T ss_pred             eeeeeccCCcccEEec-CCCEEEEEecccc
Confidence            3579999999999875 4569999997653

>PRK12396 5-methylribose kinase; Reviewed

Probab=90.20  E-value=2.8  Score=45.97  Aligned_cols=28  Identities=7%  Similarity=0.072  Sum_probs=23.6

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++|+||.|.||+++++ .+|++|.-++.
T Consensus       228 aLlHGDlHtGSI~v~~~-~~kvIDpEFAf  255 (409)
T PRK12396        228 ALIHGDLHTGSVFVKND-STKVIDPEFAF  255 (409)
T ss_pred             hhccCcCCCCCEEecCC-ceEEEcccccc
Confidence            48999999999999975 58888877664

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.84  E-value=0.73  Score=48.04  Aligned_cols=29  Identities=14%  Similarity=0.215  Sum_probs=25.1

Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47899999999999987 678999999653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.76  E-value=2.5  Score=42.96  Aligned_cols=78  Identities=12%  Similarity=0.205  Sum_probs=45.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHH-HHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~-~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .+++..+.+--|.--..|..   .++.     .++-+|+=.....   ..+..+...+ .+...+--.|.+++.+....+
T Consensus        16 ~~i~er~~v~gG~inea~~v---~dg~-----~~~FvK~n~~~~~---~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~   84 (286)
T COG3001          16 GEIKEREEVSGGDINEAWRL---RDGT-----DPFFVKCNQREQL---SMFTAEADGLELLARSNTITVPKVIAVGASRD   84 (286)
T ss_pred             hhhhcccccCCccccceeEe---ecCC-----cceEEEecchhhH---HHHHHHHHHHHHHHhcCCccccceEEecCCCC
Confidence            34445555555554444544   3343     3688887543221   2222222211 333334456778888888899


Q ss_pred             EEEEEEecCC
Q 007046          120 KICIIMKFYE  129 (620)
Q Consensus       120 ~~~IVmE~~~  129 (620)
                      +.|+||||++
T Consensus        85 ~sylVle~L~   94 (286)
T COG3001          85 HSYLVLEYLP   94 (286)
T ss_pred             eeEEEEeecc
Confidence            9999999998

>PHA03111 Ser/Thr kinase; Provisional

Probab=88.00  E-value=0.5  Score=50.12  Aligned_cols=64  Identities=20%  Similarity=0.197  Sum_probs=37.6

Q ss_pred             EEEEEecCCCChHHHHH--HhcCCCCCH-HHHHHHHHHHHHHHHHHHHC----CCeeecccCCcEEEccCC
Q 007046          121 ICIIMKFYEGSVGDRMA--QLKGGKLSL-SNVFRYAIDLAQGILQLHSK----GILVLNLKPFNFILNEAD  184 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~--~~~~~~l~~-~~~~~i~~qIa~gL~yLHs~----gIiHrDLKP~NILld~~~  184 (620)
                      ..||+.++.++....-.  ....+-.+. +-+..+..||+.-.-.+-..    .++|-||||+|||+-+..
T Consensus       250 nIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        250 NIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             cEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence            35777777654322111  112222333 34566778887665444333    599999999999995443

>PF02237 BPL_C: Biotin protein ligase C terminal domain; InterPro: IPR003142 This C-terminal domain has an SH3-like barrel fold, the function of which is unknown

Probab=87.04  E-value=1.6  Score=32.81  Aligned_cols=33  Identities=27%  Similarity=0.281  Sum_probs=26.3

Q ss_pred             cccEEEeeeccccccccCCCCCCCcceeeeEEEEecCCeEEEEcCC
Q 007046          460 VGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG  505 (620)
Q Consensus       460 ~g~~v~~k~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  505 (620)
                      .||.|+|+.             .+..-+|++..||++|+|+|+.++
T Consensus         2 lG~~V~v~~-------------~~~~~~G~~~gId~~G~L~v~~~~   34 (48)
T PF02237_consen    2 LGQEVRVET-------------GDGEIEGIAEGIDDDGALLVRTED   34 (48)
T ss_dssp             TTSEEEEEE-------------TSCEEEEEEEEEETTSEEEEEETT
T ss_pred             CCCEEEEEE-------------CCeEEEEEEEEECCCCEEEEEECC
Confidence            477888764             223469999999999999999983

It is found associated with prokaryotic bifunctional transcriptional repressors [] and eukaryotic enzymes involved in biotin utilization [, ]. In Escherichia coli the biotin operon repressor (BirA) is a bifunctional protein. BirA acts both as the acetyl-coA carboxylase biotin holoenzyme synthetase (6.3.4.15 from EC) and as the biotin operon repressor. DNA sequence analysis of mutations indicates that the helix-turn-helix DNA binding region is located at the N terminus while mutations affecting enzyme function, although mapping over a large region, are found mainly in the central part of the protein's primary sequence [].; GO: 0006464 protein modification process; PDB: 3RUX_A 2CGH_A 3L1A_B 3L2Z_A 1HXD_A 1BIB_A 2EWN_B 1BIA_A 2EJ9_A 3FJP_A ....

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=85.55  E-value=0.6  Score=49.75  Aligned_cols=75  Identities=20%  Similarity=0.227  Sum_probs=42.5

Q ss_pred             EEEEecCCCChHHHHHH--hcCCCCCH-HHHHHHHHHHHHHHHHHH----HCCCeeecccCCcEEEccCC----------
Q 007046          122 CIIMKFYEGSVGDRMAQ--LKGGKLSL-SNVFRYAIDLAQGILQLH----SKGILVLNLKPFNFILNEAD----------  184 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~--~~~~~l~~-~~~~~i~~qIa~gL~yLH----s~gIiHrDLKP~NILld~~~----------  184 (620)
                      .||+.++.++....-..  ...|-.+. .-+..+..||+.-.--+-    -..++|-||||+|||+-+..          
T Consensus       247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~  326 (434)
T PF05445_consen  247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNR  326 (434)
T ss_pred             EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCe
Confidence            47888877643322111  11122222 345566677765432232    23599999999999994332          


Q ss_pred             --------cEEEeccCCccc
Q 007046          185 --------RAVLGDVGIPHL  196 (620)
Q Consensus       185 --------~vkL~DFGla~~  196 (620)
                              .++|.||.+++.
T Consensus       327 ~~vF~Epi~~~LnDFDfSqv  346 (434)
T PF05445_consen  327 NYVFKEPIRCCLNDFDFSQV  346 (434)
T ss_pred             EEEecccceeeecccCHHHh
Confidence                    346777777654

; GO: 0004672 protein kinase activity, 0005524 ATP binding

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	620
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-13
3g51_A	325	Structural Diversity Of The Active Conformation Of		8e-13
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		8e-13
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-12
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-12
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-11
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		8e-11
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		8e-11
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-10
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-10
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-10
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-10
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-10
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-10
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-10
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-10
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		6e-10
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		6e-10
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		8e-10
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-09
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-09
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-09
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-09
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-08
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-08
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-08
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-08
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-08
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-08
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-08
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		4e-08
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-08
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-07
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		4e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		5e-07
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-07
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		6e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-07
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		8e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		9e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-06
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-06
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-06
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		2e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		3e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-06
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		4e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		4e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		4e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-06
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		8e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		8e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		8e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		8e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		8e-06
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		9e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		9e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		9e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		9e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		9e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-05
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-05
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-05
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		3e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-05
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-05
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-05
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		4e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-05
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		5e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		6e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		6e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		7e-05
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		7e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		7e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		7e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		7e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		7e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		8e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		8e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		8e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		9e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		9e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		2e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		2e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-04
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		4e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		4e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		4e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		5e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		5e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		5e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		5e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		5e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		5e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		5e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		6e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-04
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		7e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		7e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		8e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		8e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		8e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		8e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		8e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		8e-04
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-04

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
           PS  +L   +G+G FG+V+L    +S  D  + +  A+K+L        DR+R  +ER  
Sbjct: 24  PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 78
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
           D+ ++      I  L       GK+ +I+ F  G  GD   +L K    +  +V  Y  +
Sbjct: 79  DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           LA  +  LHS GI+  +LKP N +L+E     L D             +       GT  
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 192
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YMAPE      RG      D W F   + EMLTG  P  G+   E    +++ +    +P
Sbjct: 193 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 247
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
             L P  +++L   F+ +  +R
Sbjct: 248 QFLSPEAQSLLRMLFKRNPANR 269

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
           PS  +L   +G+G FG+V+L    +S  D  + +  A+K+L        DR+R  +ER  
Sbjct: 23  PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 77
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
           D+ ++      I  L       GK+ +I+ F  G  GD   +L K    +  +V  Y  +
Sbjct: 78  DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           LA  +  LHS GI+  +LKP N +L+E     L D             +       GT  
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YMAPE      RG      D W F   + EMLTG  P  G+   E    +++ +    +P
Sbjct: 192 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 246
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
             L P  +++L   F+ +  +R
Sbjct: 247 QFLSPEAQSLLRMLFKRNPANR 268

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
           PS  +L   +G+G FG+V+L    +S  D  + +  A+K+L        DR+R  +ER  
Sbjct: 23  PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 77
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
           D+ ++      I  L       GK+ +I+ F  G  GD   +L K    +  +V  Y  +
Sbjct: 78  DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           LA  +  LHS GI+  +LKP N +L+E     L D             +       GT  
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YMAPE      RG      D W F   + EMLTG  P  G+   E    +++ +    +P
Sbjct: 192 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 246
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
             L P  +++L   F+ +  +R
Sbjct: 247 QFLSPEAQSLLRMLFKRNPANR 268

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 31/273 (11%)
Query: 34  TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMR 89
           +N   KPS       IG+G FG+V LA H    E+       AVK+L       K++   
Sbjct: 31  SNPHAKPSDFHFLKVIGKGSFGKVLLARH--KAEEV----FYAVKVLQKKAILKKKEEKH 84
Query: 90  VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
           ++ ER  ++ LK      +  L        K+  ++ +  G  G+    L+  +  L   
Sbjct: 85  IMSER--NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPR 140
Query: 150 FR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
            R YA ++A  +  LHS  I+  +LKP N +L+     VL D             +S   
Sbjct: 141 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF- 199
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
              GTP Y+APE      + P     D W     + EML G+ P   R+  E+YD ++ +
Sbjct: 200 --CGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
Query: 269 QEIPPIPSGLPPAVEN----VLLGCFEYDLRSR 297
                 P  L P + N    +L G  + D   R
Sbjct: 255 ------PLQLKPNITNSARHLLEGLLQKDRTKR 281

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 40  PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
           PS  +L   +G+G FG+V+L          D  H  A+K+L        DR+R  +ER  
Sbjct: 27  PSHFELLKVLGQGSFGKVFLVR---KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER-- 81
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
           D+         +  L       GK+ +I+ F  G  GD   +L K    +  +V  Y  +
Sbjct: 82  DILADVNH-PFVVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           LA G+  LHS GI+  +LKP N +L+E     L D             +       GT  
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF---CGTVE 195
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           YMAPE      R   S   D W +   + EMLTG  P  G+   E    +++ +    +P
Sbjct: 196 YMAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--LGMP 250
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
             L    +++L   F+ +  +R
Sbjct: 251 QFLSTEAQSLLRALFKRNPANR 272

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           + +AW  P  +LKL  ++G G FGEVW+AT+       +++ +VAVK + P     +   
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 230
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II +F  +GS+ D +   +G K  L  + 
Sbjct: 231 LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
            ++  +A+G+  +  +  +  +L+  N +++ +    + D                L R 
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF--------------GLARV 333
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   ++E++T G  P  G S  E
Sbjct: 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +  A+ R   +P  P   P  + N+++ C++     RP    I  V 
Sbjct: 394 VIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           D +AW  P  ++KL  R+G G FGEVW+  +  ST       +VAVK L P     ++  
Sbjct: 4   DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNST-------KVAVKTLKPGTMS-VQAF 55
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
           LE  N   +K    + +  L  +      I II ++  +GS+ D +   +GGK+ L  + 
Sbjct: 56  LEEAN--LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI 113
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
            ++  +A+G+  +  K  +  +L+  N +++E+    + D                L R 
Sbjct: 114 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG--------------LARV 159
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  GR+  +
Sbjct: 160 IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +  A+ +   +P +    P  + +++  C++     RP
Sbjct: 220 VMTALSQGYRMPRV-ENCPDELYDIMKMCWKEKAEERP 256

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           + +AW  P  +LKL  ++G G FGEVW+AT+       +++ +VAVK + P     +   
Sbjct: 6   EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 57
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II +F  +GS+ D +   +G K  L  + 
Sbjct: 58  LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 114
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
            ++  +A+G+  +  +  +  +L+  N +++ +    + D                L R 
Sbjct: 115 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF--------------GLARV 160
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   ++E++T G  P  G S  E
Sbjct: 161 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           +  A+ R   +P  P   P  + N+++ C++     RP    I  V 
Sbjct: 221 VIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 114/272 (41%), Gaps = 17/272 (6%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLN 96
           I+ S + L  RIG G FG V+            ++H +VAVKIL  V     +    R  
Sbjct: 33  IEASEVMLSTRIGSGSFGTVYKG----------KWHGDVAVKILKVVDPTPEQFQAFRNE 82
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
              L+      I    G  +    + I+ ++ EGS   +   ++  K  +  +   A   
Sbjct: 83  VAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
           AQG+  LH+K I+  ++K  N  L+E     +GD             S  + +  G+  +
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF-GLATVKSRWSGSQQVEQPTGSVLW 200
Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIP 275
           MAPE  + +   P SF++D + +   + E++TG  P     + D+I   V R    P + 
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 276 ---SGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
                 P A++ ++  C +     RPL   IL
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19  DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
           +D + ++T +   + ++ W  P   + +  RIG G FG V+            ++H +VA
Sbjct: 14  EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 62
Query: 77  VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
           VK+L+       ++   +     L+      I    G S    ++ I+ ++ EGS     
Sbjct: 63  VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 121
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
             +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +GD      
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV 181
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
                  S    +  G+  +MAPE  + + + P SF++D + F   + E++TG  P    
Sbjct: 182 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 241 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 31  SNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRM 88
           S+ ++ W  P   + +  RIG G FG V+            ++H +VAVK+L+       
Sbjct: 2   SDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQ 51
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           ++   +     L+      I    G S    ++ I+ ++ EGS       +   K  +  
Sbjct: 52  QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
           +   A   AQG+  LH+K I+  +LK  N  L+E     +GD             S    
Sbjct: 111 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFE 169
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR 267
           +  G+  +MAPE  + + + P SF++D + F   + E++TG  P     + D+I   V R
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 268 ---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
                ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 230 GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19  DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
           +D + ++T +   + ++ W  P   + +  RIG G FG V+            ++H +VA
Sbjct: 14  EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 62
Query: 77  VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
           VK+L+       ++   +     L+      I    G S    ++ I+ ++ EGS     
Sbjct: 63  VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 121
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
             +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +GD      
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE 181
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
                  S    +  G+  +MAPE  + + + P SF++D + F   + E++TG  P    
Sbjct: 182 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 241 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 31  SNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRM 88
           S+ ++ W  P   + +  RIG G FG V+            ++H +VAVK+L+       
Sbjct: 2   SDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQ 51
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           ++   +     L+      I    G S    ++ I+ ++ EGS       +   K  +  
Sbjct: 52  QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
           +   A   AQG+  LH+K I+  +LK  N  L+E     +GD             S    
Sbjct: 111 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFE 169
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR 267
           +  G+  +MAPE  + + + P SF++D + F   + E++TG  P     + D+I   V R
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 268 ---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
                ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 230 GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19  DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
           +D + ++T +   + ++ W  P   + +  RIG G FG V+            ++H +VA
Sbjct: 13  EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 61
Query: 77  VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
           VK+L+       ++   +     L+      I    G S    ++ I+ ++ EGS     
Sbjct: 62  VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 120
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
             +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +GD      
Sbjct: 121 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV 180
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
                  S    +  G+  +MAPE  + + + P SF++D + F   + E++TG  P    
Sbjct: 181 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 240 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 36/281 (12%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           + +AW  P  +LKL  ++G G FGEVW+AT+       +++ +VAVK + P     +   
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 224
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II +F  +GS+ D +   +G K  L  + 
Sbjct: 225 LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 281
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
            ++  +A+G+  +  +  +  +L+  N +++ +    + D                   R
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA---------------R 326
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
           +G      + APE       G  + ++D W F   ++E++T G  P  G S  E+  A+ 
Sbjct: 327 VGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           R   +P  P   P  + N+++ C++     RP    I  V 
Sbjct: 384 RGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 19/291 (6%)
Query: 20  DSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAV 77
           D + ++T +   + ++ W  P   + +  RIG G FG V+            ++H +VAV
Sbjct: 7   DRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAV 55
Query: 78  KILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMA 137
           K+L+       ++   +     L+      I    G S    ++ I+ ++ EGS      
Sbjct: 56  KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHL 114
Query: 138 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
            +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +GD       
Sbjct: 115 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 174
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-R 256
                 S    +  G+  +MAPE  + + + P SF++D + F   + E++TG  P     
Sbjct: 175 SRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 257 SVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 234 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
            RIG G FG V+            ++H +VAVK+L+       ++   +     L+    
Sbjct: 16  QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I    G S    ++ I+ ++ EGS       +   K  +  +   A   AQG+  LH+
Sbjct: 66  VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
           K I+  +LK  N  L+E     +GD             S    +  G+  +MAPE  + +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 183
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
            + P SF++D + F   + E++TG  P     + D+I   V R     ++  + S  P A
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 243
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           ++ ++  C +     RPL   IL
Sbjct: 244 MKRLMAECLKKKRDERPLFPQIL 266

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
            RIG G FG V+            ++H +VAVK+L+       ++   +     L+    
Sbjct: 14  QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I    G S    ++ I+ ++ EGS       +   K  +  +   A   AQG+  LH+
Sbjct: 64  VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
           K I+  +LK  N  L+E     +GD             S    +  G+  +MAPE  + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
            + P SF++D + F   + E++TG  P     + D+I   V R     ++  + S  P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           ++ ++  C +     RPL   IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K    +L   +G+G FG+V+LA    + +        A+K L   K+D +      L D
Sbjct: 15  LKIEDFELHKMLGKGSFGKVFLAEFKKTNQ------FFAIKAL---KKDVV------LMD 59
Query: 98  LFLKCQGVE----GICWLQGISV-------INGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
             ++C  VE     + W                 +  +M++  G  GD M  ++   K  
Sbjct: 60  DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFD 117
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
           LS    YA ++  G+  LHSKGI+  +LK  N +L++     + D             ++
Sbjct: 118 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 177
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
           +     GTP+Y+APE     +    +   D W F   + EML G  P  G+  +E++ ++
Sbjct: 178 EF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMTDI 303
             R + P  P  L    +++L+  F            D+R  PL  +I
Sbjct: 232 --RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
            RIG G FG V+            ++H +VAVK+L+       ++   +     L+    
Sbjct: 14  QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I    G S    ++ I+ ++ EGS       +   K  +  +   A   AQG+  LH+
Sbjct: 64  VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
           K I+  +LK  N  L+E     +GD             S    +  G+  +MAPE  + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
            + P SF++D + F   + E++TG  P     + D+I   V R     ++  + S  P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           ++ ++  C +     RPL   IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
            RIG G FG V+            ++H +VAVK+L+       ++   +     L+    
Sbjct: 14  QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I    G S    ++ I+ ++ EGS       +   K  +  +   A   AQG+  LH+
Sbjct: 64  VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
           K I+  +LK  N  L+E     +GD             S    +  G+  +MAPE  + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
            + P SF++D + F   + E++TG  P     + D+I   V R     ++  + S  P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           ++ ++  C +     RPL   IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 36  AWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW  P  ++KL  ++G G FGEVW+  +  ST+       VAVK L P     ++  LE 
Sbjct: 6   AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK-------VAVKTLKPGTMS-VQAFLEE 57
Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
            N   +K    + +  L  +      I II +F  +GS+ D +   +GGK+ L  +  ++
Sbjct: 58  AN--LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
             +A+G+  +  K  +  +L+  N +++E+    + D                L R +  
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF--------------GLARVIED 161
Query: 214 PNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
             Y A      P +W  PE    G  + +++ W F   + E++T G  P  GR+  ++  
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMS 221
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           A+ +   +P +    P  + +++  C++     RP
Sbjct: 222 ALSQGYRMPRM-ENCPDELYDIMKMCWKEKAEERP 255

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 18/282 (6%)
Query: 29  ATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKED 86
            + + ++ W  P   + +  RIG G FG V+            ++H +VAVK+L+     
Sbjct: 11  GSRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPT 60
Query: 87  RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL 146
             ++   +     L+      I    G S    ++ I+ ++ EGS           K  +
Sbjct: 61  PQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEM 119
Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD 206
             +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD             S  
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQ 178
Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAV 265
             +  G+  +MAPE  + +   P SF++D + F   + E++TG  P     + D+I + V
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 266 VR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            R     ++  + S  P  ++ ++  C +     RP    IL
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRM-------RVLLERLNDL 98
           +G+G FG+V LA      E  D Y   AVK+L     +++D +       R+L    N  
Sbjct: 31  LGKGSFGKVMLAR---VKETGDLY---AVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL     +  C  Q       ++  +M+F  G  GD M  + K  +   +    YA ++ 
Sbjct: 85  FL----TQLFCCFQ----TPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEII 134
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             ++ LH KGI+  +LK  N +L+      L D             ++      GTP+Y+
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF---CGTPDYI 191
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           APE  Q  + GP     D W     + EML G  P    + D++++A++  + + P
Sbjct: 192 APEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 18/279 (6%)
Query: 32  NDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMR 89
           + ++ W  P   + +  RIG G FG V+            ++H +VAVK+L+       +
Sbjct: 2   DSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQ 51
Query: 90  VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
           +   +     L+      I    G S    ++ I+ ++ EGS           K  +  +
Sbjct: 52  LQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKL 110
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
              A   A+G+  LH+K I+  +LK  N  L+E +   +GD             S    +
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQ 169
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR- 267
             G+  +MAPE  + +   P SF++D + F   + E++TG  P     + D+I + V R 
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Query: 268 --RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
               ++  + S  P  ++ ++  C +     RP    IL
Sbjct: 230 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K     L   +G+G FG+V+LA    + +        A+K L   K+D +      L D
Sbjct: 14  LKIEDFILHKMLGKGSFGKVFLAEFKKTNQ------FFAIKAL---KKDVV------LMD 58
Query: 98  LFLKCQGVE----GICWLQGISV-------INGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
             ++C  VE     + W                 +  +M++  G  GD M  ++   K  
Sbjct: 59  DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFD 116
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
           LS    YA ++  G+  LHSKGI+  +LK  N +L++     + D             ++
Sbjct: 117 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
                 GTP+Y+APE     +    +   D W F   + EML G  P  G+  +E++ ++
Sbjct: 177 XF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMTDI 303
             R + P  P  L    +++L+  F            D+R  PL  +I
Sbjct: 231 --RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 17/263 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
            RIG G FG V+            ++H +VAVK+L+       ++   +     L+    
Sbjct: 30  QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I    G S    ++ I+ ++ EGS           K  +  +   A   A+G+  LH+
Sbjct: 80  VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
           K I+  +LK  N  L+E +   +GD             S    +  G+  +MAPE  + +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 197
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
              P SF++D + F   + E++TG  P     + D+I + V R     ++  + S  P  
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
           ++ ++  C +     RP    IL
Sbjct: 258 MKRLMAECLKKKRDERPSFPRIL 280

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 39/257 (15%)
Query: 31  SNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV 90
           +N     +K +       +G+G FG+V L+      +  DE +  AVKIL   K+D +  
Sbjct: 10  NNGNRDRMKLTDFNFLMVLGKGSFGKVMLSER----KGTDELY--AVKIL---KKDVV-- 58
Query: 91  LLERLNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
               + D  ++C  VE            +  L        ++  +M++  G  GD M  +
Sbjct: 59  ----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHI 112
Query: 140 KG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
           +  G+    +   YA ++A G+  L SKGI+  +LK  N +L+      + D        
Sbjct: 113 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172
Query: 199 XXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR 256
                +       GTP+Y+APE   +QP  +       D W F   + EML G  P  G 
Sbjct: 173 WDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAGQAPFEGE 224
Query: 257 SVDEIYDAVVRRQEIPP 273
             DE++ +++      P
Sbjct: 225 DEDELFQSIMEHNVAYP 241

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
           +G+G FG+V L+      +  DE +  AVKIL   K+D +      + D  ++C  VE  
Sbjct: 349 LGKGSFGKVMLS----ERKGTDELY--AVKIL---KKDVV------IQDDDVECTMVEKR 393
Query: 108 ----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDL 156
                     +  L        ++  +M++  G  GD M  ++  G+    +   YA ++
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEI 451
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
           A G+  L SKGI+  +LK  N +L+      + D             +       GTP+Y
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF---CGTPDY 508
Query: 217 MAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           +APE   +QP  +       D W F   + EML G  P  G   DE++ +++
Sbjct: 509 IAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 35/279 (12%)
Query: 41  SALKLRHRIGRGPFGEVWLA-------THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           + L L   IG G FG+V+ A           +  D DE  +++  I +  +E ++  +L+
Sbjct: 7   AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDE--DISQTIENVRQEAKLFAMLK 64
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
             N           I  L+G+ +    +C++M+F  G   +R+  L G ++    +  +A
Sbjct: 65  HPN-----------IIALRGVCLKEPNLCLVMEFARGGPLNRV--LSGKRIPPDILVNWA 111
Query: 154 IDLAQGILQLHSKGILVL---NLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
           + +A+G+  LH + I+ +   +LK  N ++ +  +   GD+            + +  R 
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQ--KVENGDLSNKILKITDFGLAREWHRT 169
Query: 211 L-----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
                 G   +MAPE  +  +    S  +D W +   + E+LTG  P  G     +   V
Sbjct: 170 TKMSAAGAYAWMAPEVIRASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
              +   PIPS  P     ++  C+  D  SRP  T+IL
Sbjct: 227 AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 39/244 (15%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K +       +G+G FG+V LA     TE+       A+KIL   K+D +      + D
Sbjct: 16  VKLTDFNFLMVLGKGSFGKVMLADRK-GTEEL-----YAIKIL---KKDVV------IQD 60
Query: 98  LFLKCQGVEG-----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
             ++C  VE            +  L        ++  +M++  G  GD M  ++  GK  
Sbjct: 61  DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFK 118
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
                 YA +++ G+  LH +GI+  +LK  N +L+      + D             + 
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 178
Query: 206 DLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 263
           +     GTP+Y+APE   +QP  +       D W +   + EML G  P  G   DE++ 
Sbjct: 179 EF---CGTPDYIAPEIIAYQPYGKS-----VDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 230
Query: 264 AVVR 267
           +++ 
Sbjct: 231 SIME 234

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 24/289 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D  ++ +VAVK+L   +  D    +
Sbjct: 4   MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 58  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D              +   
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S D +    VR 
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFKSD 310
             IPP     GL   ++ V+L     +  +R      +  D++RV   +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 32/277 (11%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMRVLLERLNDLFL 100
           L ++ +IG G FG V  A          E+H  +VAVKIL  +++D      ER+N+   
Sbjct: 39  LNIKEKIGAGSFGTVHRA----------EWHGSDVAVKIL--MEQD---FHAERVNEFLR 83
Query: 101 KCQGVE-----GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR--YA 153
           +   ++      I    G       + I+ ++       R+    G +  L    R   A
Sbjct: 84  EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 154 IDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            D+A+G+  LH++   I+  NLK  N ++++     + D             S       
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA---A 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTP +MAPE  + E   P + ++D + F   + E+ T  QP    +  ++  AV  + + 
Sbjct: 201 GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
             IP  L P V  ++ GC+  +   RP    I+ + +
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 22/281 (7%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFL 100
            ++  +IGRG F EV+ A   L          VA+K +    + + + R    +  DL  
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGV------PVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK--LSLSNVFRYAIDLA 157
           +      I +     + + ++ I+++  + G +   +   K  K  +    V++Y + L 
Sbjct: 88  QLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  +HS+ ++  ++KP N  +       LGD+            +  L   +GTP YM
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYM 203
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV--VRRQEIPPIP 275
           +PE+         +F++D W   C + EM     P  G  ++ +Y     + + + PP+P
Sbjct: 204 SPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPLP 259
Query: 276 SG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWTG 315
           S      +  ++  C   D   RP +T +  V K     T 
Sbjct: 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           RIG+G FGEV+         D      VA+KI+   + +     +++   +  +C     
Sbjct: 26  RIGKGSFGEVYKGI------DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 78
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           I    G  + + K+ IIM++  G  G  +  LK G L  + +     ++ +G+  LHS+ 
Sbjct: 79  ITRYFGSYLKSTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPE 225
            +  ++K  N +L+E      GDV             + + R   +GTP +MAPE  +  
Sbjct: 137 KIHRDIKAANVLLSEQ-----GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK-- 189
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE-- 283
            +    F+ D W    + IE+  G  P       +++   V    +  IP   PP +E  
Sbjct: 190 -QSAYDFKADIWSLGITAIELAKGEPPNS-----DLHPMRV----LFLIPKNSPPTLEGQ 239
Query: 284 ------NVLLGCFEYDLRSRPLMTDILR 305
                   +  C   D R RP   ++L+
Sbjct: 240 HSKPFKEFVEACLNKDPRFRPTAKELLK 267

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 29/283 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           + W  P  +L+L  R+G G FGEVW+ T   +T       +VA+K L P        L E
Sbjct: 2   DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNT-------KVAIKTLKPGTMSPESFLEE 54
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 LK   +     +Q  +V++ +   I+  Y  +GS+ D +   +G  L L N+  
Sbjct: 55  AQIMKKLKHDKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++       + D              ++   R 
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF-----GLARLIEDNEXTARQ 164
Query: 212 GTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
           G      + APE     + G  + ++D W F   + E++T G  P  G +  E+ + V R
Sbjct: 165 GAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
              + P P   P ++  +++ C++ D   RP   + L+ F  D
Sbjct: 222 GYRM-PCPQDCPISLHELMIHCWKKDPEERPTF-EYLQSFLED 262

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 25/245 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-------MRV 90
           I+P   +L   +G+G +G+V+             +    +K    V+  +        R 
Sbjct: 14  IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNV 149
           +LE +   F+    V+ I   Q      GK+ +I+++  G  G+   QL + G       
Sbjct: 74  ILEEVKHPFI----VDLIYAFQ----TGGKLYLILEYLSG--GELFMQLEREGIFMEDTA 123
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
             Y  +++  +  LH KGI+  +LKP N +LN      L D             +     
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-- 181
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-R 268
             GT  YMAPE     +R   +   D W     + +MLTG  P  G +  +  D +++ +
Sbjct: 182 -CGTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 269 QEIPP 273
             +PP
Sbjct: 238 LNLPP 242

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 25/245 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-------MRV 90
           I+P   +L   +G+G +G+V+             +    +K    V+  +        R 
Sbjct: 14  IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNV 149
           +LE +   F+    V+ I   Q      GK+ +I+++  G  G+   QL + G       
Sbjct: 74  ILEEVKHPFI----VDLIYAFQ----TGGKLYLILEYLSG--GELFMQLEREGIFMEDTA 123
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
             Y  +++  +  LH KGI+  +LKP N +LN      L D             +     
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-- 181
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-R 268
             GT  YMAPE     +R   +   D W     + +MLTG  P  G +  +  D +++ +
Sbjct: 182 -CGTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 269 QEIPP 273
             +PP
Sbjct: 238 LNLPP 242

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
           +++G G FG V+      +T        VAVK L     +  + ++   ++   +  KCQ
Sbjct: 37  NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
             E +  L G S     +C++  +   GS+ DR++ L G   LS     + A   A GI 
Sbjct: 89  H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            LH    +  ++K  N +L+EA  A + D                  R +GT  YMAPE 
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM-XSRIVGTTAYMAPEA 206
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
               +RG I+ ++D + F   ++E++TG+
Sbjct: 207 ----LRGEITPKSDIYSFGVVLLEIITGL 231

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 158 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 209
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +  +    ++  ++ ++M+F EG  G     +   +++   +    + + Q +  LH++G
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
           ++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE    
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 320
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
             R P   E D W     +IEM+ G  P
Sbjct: 321 --RLPYGPEVDIWSLGIMVIEMVDGEPP 346

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLERLND--LF 99
            ++   +G G FG V    H + +     Y+  A+K+L   KE  +R+  +E  ND  L 
Sbjct: 8   FQILRTLGTGSFGRV----HLIRSRHNGRYY--AMKVLK--KEIVVRLKQVEHTNDERLM 59
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQ 158
           L       I  + G      +I +IM + EG  G+  + L+  +   + V + YA ++  
Sbjct: 60  LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYM 217
            +  LHSK I+  +LKP N +L++     + D               D+   L GTP+Y+
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXLCGTPDYI 170
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPI 274
           APE    +   P +   D W F   I EML G  P    +  + Y+ ++  +   PP 
Sbjct: 171 APEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF 225

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 26  TAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHP 82
           T    S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L  
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL-- 253
Query: 83  VKEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDR 135
            KED M V      + FLK   V        +  L G+        II +F   G++ D 
Sbjct: 254 -KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
           + +    ++S   +   A  ++  +  L  K  +  NL   N ++ E     + D     
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF---- 362
Query: 196 XXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEM 246
                      L R +    Y A      P +W  PE       S ++D W F   + E+
Sbjct: 363 ----------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 247 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            T G+ P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I +
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 306 VFKS 309
            F++
Sbjct: 472 AFET 475

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 27  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 78
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F EG ++ D +   +  +  ++ V    + + Q +  LH++
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQ 135
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE   
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
              R P   E D W     +IEM+ G  P
Sbjct: 190 ---RLPYGPEVDIWSLGIMVIEMVDGEPP 215

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 31  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 82
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +  +    ++  ++ ++M+F EG  G     +   +++   +    + + Q +  LH++G
Sbjct: 83  VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
           ++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE    
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 193
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
             R P   E D W     +IEM+ G  P
Sbjct: 194 --RLPYGPEVDIWSLGIMVIEMVDGEPP 219

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 36  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 87
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +  +    ++  ++ ++M+F EG  G     +   +++   +    + + Q +  LH++G
Sbjct: 88  VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
           ++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE    
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 198
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
             R P   E D W     +IEM+ G  P
Sbjct: 199 --RLPYGPEVDIWSLGIMVIEMVDGEPP 224

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 38  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 89
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +  +    ++  ++ ++M+F EG  G     +   +++   +    + + Q +  LH++G
Sbjct: 90  VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
           ++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE    
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 200
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
             R P   E D W     +IEM+ G  P
Sbjct: 201 --RLPYGPEVDIWSLGIMVIEMVDGEPP 226

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
           +++G G FG V+      +T        VAVK L     +  + ++   ++   +  KCQ
Sbjct: 37  NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
             E +  L G S     +C++  +   GS+ DR++ L G   LS     + A   A GI 
Sbjct: 89  H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            LH    +  ++K  N +L+EA  A + D                  R +GT  YMAPE 
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM-XXRIVGTTAYMAPEA 206
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
               +RG I+ ++D + F   ++E++TG+
Sbjct: 207 ----LRGEITPKSDIYSFGVVLLEIITGL 231

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   S +       VAVK +   K+ R  +L   +  + ++    E 
Sbjct: 81  KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 132
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +  +    ++  ++ ++M+F EG  G     +   +++   +    + + Q +  LH++G
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
           ++  ++K  + +L    R  L D             S ++PRR   +GTP +MAPE    
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 243
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
             R P   E D W     +IEM+ G  P
Sbjct: 244 --RLPYGPEVDIWSLGIMVIEMVDGEPP 269

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGNMSPEAFLQE 230
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 231 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLGRLI 331
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 332 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 392 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 438

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 108/289 (37%), Gaps = 24/289 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D  ++ +VAVK+L   +  D    +
Sbjct: 4   MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 58  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D              +   
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +    VR 
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFKSD 310
             IPP     GL   ++ V+L     +  +R      +  D++RV   +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V LA    S        +VAVK++   K+ R  +L   +  + ++      
Sbjct: 52  KIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFNEV--VIMRDYQHFN 103
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F +G ++ D ++Q++  +  ++ V    +   Q +  LH++
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQ 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D             S D+P+R   +GTP +MAPE   
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS 214
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
              R   + E D W     +IEM+ G  P      D    A+ R ++ PP
Sbjct: 215 ---RSLYATEVDIWSLGIMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 258

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 113/287 (39%), Gaps = 37/287 (12%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
                 +K    E +  L  +        +I    +GS+ D +    G  L L  +   A
Sbjct: 64  ---AQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
             +A G+  +     +  +L+  N ++ E     + D                L R +  
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLIED 166
Query: 214 PNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
             Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+ D
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 226
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 227 QVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
           +++G G FG V+    Y++         VAVK L     +  + ++   ++   +  KCQ
Sbjct: 31  NKMGEGGFGVVYKG--YVNNT------TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 82
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
             E +  L G S     +C++  +   GS+ DR++ L G   LS     + A   A GI 
Sbjct: 83  H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            LH    +  ++K  N +L+EA  A + D                  R +GT  YMAPE 
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM-XXRIVGTTAYMAPEA 200
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
               +RG I+ ++D + F   ++E++TG+
Sbjct: 201 ----LRGEITPKSDIYSFGVVLLEIITGL 225

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 27/282 (9%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRY 152
                 +K    E +  L  + V    I I+M++  +G + D +    G  L L  +   
Sbjct: 64  ---AQVMKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPR 209
           A  +A G+  +     +  +L+  N ++ E      A  G               +  P 
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
           +     + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R 
Sbjct: 180 K-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
             + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 232 YRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 25/281 (8%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
                 +K    E +  L  +        +I    +GS+ D +    G  L L  +   A
Sbjct: 64  ---AQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             +A G+  +     +  +L+  N ++ E      A  G               +  P +
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 180
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
                + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R  
Sbjct: 181 -----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 233 RM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 2   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 54
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 55  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 155
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 156 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 215
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 216 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 262

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMRVLLERLNDLFL 100
           L ++ +IG G FG V  A          E+H  +VAVKIL  +++D      ER+N+   
Sbjct: 39  LNIKEKIGAGSFGTVHRA----------EWHGSDVAVKIL--MEQD---FHAERVNEFLR 83
Query: 101 KCQGVE-----GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR--YA 153
           +   ++      I    G       + I+ ++       R+    G +  L    R   A
Sbjct: 84  EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 154 IDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            D+A+G+  LH++   I+  +LK  N ++++     + D             S       
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK---XAA 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTP +MAPE  + E   P + ++D + F   + E+ T  QP    +  ++  AV  + + 
Sbjct: 201 GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
             IP  L P V  ++ GC+  +   RP    I+ + +
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 64  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 164
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 165 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 225 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           IG G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  GD  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           IG G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  GD  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 52/304 (17%)
Query: 26  TAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHP 82
           T    S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L  
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL-- 292
Query: 83  VKEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDR 135
            KED M V      + FLK   V        +  L G+        II +F   G++ D 
Sbjct: 293 -KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
           + +    +++   +   A  ++  +  L  K  +  NL   N ++ E     + D     
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF---- 401
Query: 196 XXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEM 246
                      L R +    Y A      P +W  PE       S ++D W F   + E+
Sbjct: 402 ----------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 247 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            T G+ P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I +
Sbjct: 452 ATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
Query: 306 VFKS 309
            F++
Sbjct: 511 AFET 514

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 312
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 313 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 413
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 474 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 520

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG G  G V +AT   + +      +VAVK +   K+ R  +L   +  + ++    + 
Sbjct: 52  KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFNEV--VIMRDYHHDN 103
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           +  +    ++  ++ ++M+F EG ++ D +   +  +  ++ V    + + + +  LH++
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQ 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
           G++  ++K  + +L    R  L D             S ++P+R   +GTP +MAPE   
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV------SKEVPKRKXLVGTPYWMAPEVIS 214
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
              R P   E D W     +IEM+ G  P
Sbjct: 215 ---RLPYGTEVDIWSLGIMVIEMIDGEPP 240

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 32/297 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLN 96
           IK   + L+  +G G FG+V+LA  Y  +   D+   VAVK L  P    R     +R  
Sbjct: 12  IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKM-LVAVKALKDPTLAARKD--FQREA 68
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIM---------KFYEGSVGDRMAQLKG------ 141
           +L    Q  E I    G+      + ++          KF      D M  + G      
Sbjct: 69  ELLTNLQH-EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
           G+L LS +   A  +A G++ L S+  +  +L   N ++       +GD           
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF-----GMSRD 182
Query: 202 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 257
             S+D  R  G  + M P +W P    +    + E+D W F   + E+ T G QP    S
Sbjct: 183 VYSTDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDGGWT 314
             E+ + + + + +   P   P  V +V+LGC++ + + R  + +I ++  + G  T
Sbjct: 241 NTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 437

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 24/289 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D  ++ +VAVK+L   +  D    +
Sbjct: 4   MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 58  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D                  
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +    VR 
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFKSD 310
             IPP     GL   ++ V+L     +  +R      +  D++RV   +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 182
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 183 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 238
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 239 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 270

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 64  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 164
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 165 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 225 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 39/288 (13%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRY 152
                 +K    E +  L  + V    I I+ ++  +GS+ D +    G  L L  +   
Sbjct: 64  ---AQVMKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLG 212
           A  +A G+  +     +  +L+  N ++ E     + D                L R + 
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLIE 165
Query: 213 TPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
              Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+ 
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 226 DQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 437

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 41/288 (14%)
Query: 36  AWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E 
Sbjct: 1   AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQEA 53
Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFRY 152
                L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +   
Sbjct: 54  QVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLG 212
           A  +A G+  +     +  +L+  N ++ E     + D                L R + 
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLIE 154
Query: 213 TPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
              Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+ 
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 215 DQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 260

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 29/283 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 64  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
            A  +A G+  +     +  +L   N ++ E      A  G               +  P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
            +     + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R
Sbjct: 179 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
              + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 231 GYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 24/289 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D   + +VAVK+L   +  D    +
Sbjct: 4   MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 58  RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D              +   
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +    VR 
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFKSD 310
             IPP     GL   ++ V+L     +  +R      +  D++RV   +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 7   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 5   VAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYL 64
           V+  +  D+  E+ D+ D     + ++ D    I+   ++L   IG G FG+V     Y+
Sbjct: 359 VSVSETDDYA-EIIDEEDTY--TMPSTRDYE--IQRERIELGRCIGEGQFGDVHQGI-YM 412
Query: 65  STEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-GKICI 123
           S E+      VA+K       D +R   E+     L  +  +    ++ I VI    + I
Sbjct: 413 SPEN--PAMAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 124 IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
           IM+           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  
Sbjct: 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT 527
Query: 184 DRAVLGDVXXXXXXXXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TD 235
           D   LGD              +    LP +     +MAPE         I+F      +D
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASD 574
Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
            W F   + E+L  GV+P  G   +++   +   + +P +P   PP + +++  C+ YD 
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDP 633
Query: 295 RSRPLMTDI 303
             RP  T++
Sbjct: 634 SRRPRFTEL 642

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 437

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N I+++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---I 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 7   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
           QG+  LH+  ++  +LK  N  LN+     +GD               DL    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
           QG+  LH+  ++  +LK  N  LN+     +GD               DL    GTPNY+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 194 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 248
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + P    ++      D   RP + ++L
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELL 275

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 10  IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 63
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 64  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 180
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 181 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 231 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 176
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 177 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 232
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 233 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 264

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 115/286 (40%), Gaps = 51/286 (17%)
Query: 43  LKLRHRIGRGPFGEVWLAT--HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           + ++H++G G +GEV++     Y  T        VAVK L   KED M V      + FL
Sbjct: 34  ITMKHKLGGGQYGEVYVGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 76
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
           K   V        +  L G+  +     I+ ++   G++ D + +    +++   +   A
Sbjct: 77  KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
             ++  +  L  K  +  +L   N ++ E     + D                L R +  
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF--------------GLSRLMTG 182
Query: 214 PNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
             Y A      P +W  PE       S ++D W F   + E+ T G+ P  G  + ++YD
Sbjct: 183 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + +   +   P G PP V  ++  C+++    RP   +  + F++
Sbjct: 243 LLEKGYRMEQ-PEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 9   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 62
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 63  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 179
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 180 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 230 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 30/282 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS +  +  IG G FGEV+     L T    +   VA+K L     ++ RV       
Sbjct: 41  IHPSCVTRQKVIGAGEFGEVYKGM--LKTSSGKKEVPVAIKTLKAGYTEKQRVD------ 92
Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            FL   G+ G      I  L+G+      + II ++ E    D+  + K G+ S+  +  
Sbjct: 93  -FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG 151
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSD 206
               +A G+  L +   +  +L   N ++N      + D     V               
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
           +P R   P  ++  ++        +  +D W F   + E++T G +P    S  E+  A+
Sbjct: 212 IPIRWTAPEAISYRKF--------TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
                +P  P   P A+  +++ C++ +   RP   DI+ + 
Sbjct: 264 NDGFRLP-TPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 7   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
            +L  +IG G FGE++L T+  + E      EVA+K L  VK    ++L E  + ++   
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNE------EVAIK-LENVKTKHPQLLYE--SKIYRIL 59
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
           QG  GI  ++   V      ++M     S+ D +      KLSL  V   A  +   +  
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 163 LHSKGILVLNLKPFNFILNEADRA 186
           +HSK  L  ++KP NF++    RA
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRA 142

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 4   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 56
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 57  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 157
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 158 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 217
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 218 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 264

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 11  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +G + D +    G  L L  +  
Sbjct: 64  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            A  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 164
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 165 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  D   RP   + L+ F  D
Sbjct: 225 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLED 271

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 5   VAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYL 64
           V+  +  D+  E+ D+ D     + ++ D    I+   ++L   IG G FG+V     Y+
Sbjct: 359 VSVSETDDYA-EIIDEEDTY--TMPSTRDYE--IQRERIELGRCIGEGQFGDVHQGI-YM 412
Query: 65  STEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-GKICI 123
           S E+      VA+K       D +R   E+     L  +  +    ++ I VI    + I
Sbjct: 413 SPEN--PAMAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 124 IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
           IM+           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  
Sbjct: 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 527
Query: 184 DRAVLGDVXXXXXXXXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TD 235
           D   LGD              +    LP +     +MAPE         I+F      +D
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASD 574
Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
            W F   + E+L  GV+P  G   +++   +   + +P +P   PP + +++  C+ YD 
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDP 633
Query: 295 RSRPLMTDI 303
             RP  T++
Sbjct: 634 SRRPRFTEL 642

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 29/283 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 1   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 53
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 54  AQVMKKLRHEKL-----VQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
            A  +A G+  +     +  +L+  N ++ E      A  G               +  P
Sbjct: 109 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
            +     + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R
Sbjct: 169 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
              + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 221 GYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 261

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 12  IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 65
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 66  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 182
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 183 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 233 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 35  IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 88
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 89  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 205
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 206 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 256 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 202
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 203 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 258
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 259 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 290

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 201 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 256
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             IP  + P   +++    + D  +RP + ++L
Sbjct: 257 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 288

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 106/287 (36%), Gaps = 24/287 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D   + +VAVK+L   +  D    +
Sbjct: 21  MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 74
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 75  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 134
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D              +   
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +    VR 
Sbjct: 195 AVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 308
             IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 252 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 298

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 123/299 (41%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II++F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             ++S   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y A      P +W  PE       S ++D W F   + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 24/289 (8%)
Query: 37  WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
              PS L  R+ +G     G   EV LA       D   + +VAVK+L   +  D    +
Sbjct: 4   MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 89  RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           R   E  N   L    +  +          G +  I+  Y   V  R      G ++   
Sbjct: 58  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
                 D  Q +   H  GI+  ++KP N +++  +   + D              +   
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
             +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +    VR 
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFKSD 310
             IPP     GL   ++ V+L     +  +R      +  D++RV   +
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 7   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V     Y+S E+      VA+K       D +R   E+   
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 57
Query: 98  LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             L  +  +    ++ I VI    + IIM+           Q++   L L+++  YA  L
Sbjct: 58  EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
           +  +  L SK  +  ++   N +++  D   LGD              +    LP +   
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 174
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
             +MAPE         I+F      +D W F   + E+L  GV+P  G   +++   +  
Sbjct: 175 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 225 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 110/286 (38%), Gaps = 21/286 (7%)
Query: 23  HLRTAVATSNDTNAWIKPSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH 81
           H   AV      N    P  L  +  RIG+G FGEV+         D      VA+KI+ 
Sbjct: 4   HSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGI------DNRTQQVVAIKIID 57
Query: 82  PVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG 141
             + +     +++   +  +C     +    G  +   K+ IIM++  G  G  +  L+ 
Sbjct: 58  LEEAEDEIEDIQQEITVLSQCDS-SYVTKYYGSYLKGSKLWIIMEYLGG--GSALDLLRA 114
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
           G      +     ++ +G+  LHS+  +  ++K  N +L+E      GDV          
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ-----GDVKLADFGVAGQ 169
Query: 202 XXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 259
              + + R   +GTP +MAPE  Q   +     + D W    + IE+  G  P       
Sbjct: 170 LTDTQIKRNTFVGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM 226
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            +   ++ +   P +      + +  +  C   D   RP   ++L+
Sbjct: 227 RVL-FLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLK 271

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D              +      GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 36  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 90  LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N +++E     + D                     GTP Y+APE     +
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 198
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 256
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 257 RNLLQVDLTKR 267

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           IG G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 52/300 (17%)
Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
           +S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87  RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
            M V      + FLK   V        +  L G+        II +F   G++ D + + 
Sbjct: 55  TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
              ++S   +   A  ++  +  L  K  +  +L   N ++ E     + D         
Sbjct: 109 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-------- 160
Query: 200 XXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-G 249
                  L R +    Y A      P +W  PE       S ++D W F   + E+ T G
Sbjct: 161 ------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           + P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 215 MSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15  YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
           ++ F +SD         N + N  +  +   +   IGRG FGEV+           D   
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74  EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
             A+K L      +K+     L ER+    +       I  +        K+  I+    
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D+            +S     +GT  YMAPE  Q  V    S   D +   C + ++L 
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           G  P R  ++ D+     +       +P    P + ++L G  + D+  R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15  YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
           ++ F +SD         N + N  +  +   +   IGRG FGEV+           D   
Sbjct: 161 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 214
Query: 74  EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
             A+K L      +K+     L ER+    +       I  +        K+  I+    
Sbjct: 215 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 274
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     +
Sbjct: 275 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 332
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D+            +S     +GT  YMAPE  Q  V    S   D +   C + ++L 
Sbjct: 333 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 385
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           G  P R  ++ D+     +       +P    P + ++L G  + D+  R
Sbjct: 386 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 435

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II++F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             ++S   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G 
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
           ++ G G FG V+      +T        VAVK L     +  + ++   ++   +  KCQ
Sbjct: 28  NKXGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ 79
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
             E +  L G S     +C++  +   GS+ DR++ L G   LS     + A   A GI 
Sbjct: 80  H-ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            LH    +  ++K  N +L+EA  A + D                  R +GT  Y APE 
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX-XSRIVGTTAYXAPEA 197
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
               +RG I+ ++D + F   ++E++TG+
Sbjct: 198 ----LRGEITPKSDIYSFGVVLLEIITGL 222

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  SA++    +G   FG+V+   H       ++   VA+K L    E  +R        
Sbjct: 6   ISLSAVRFMEELGEDRFGKVY-KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 98  LFLKCQGVEGICWL------QGISVI-----NGKI--CIIMKFYEGSVG----DRMAQLK 140
           L  + Q    +C L      Q +S+I     +G +   ++M+     VG    DR  +  
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 122
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
              L   +       +A G+  L S  ++  +L   N ++ +     + D+         
Sbjct: 123 -SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY-- 179
Query: 201 XXXSSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              ++D  + LG  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG 
Sbjct: 180 ---AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 234
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           S  ++ + ++R +++ P P   P  V  +++ C+      RP   DI
Sbjct: 235 SNQDVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 116 VINGKICIIMKFYEG-SVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
           V+  ++ ++MK   G SV D +  +      K G L  S +     ++ +G+  LH  G 
Sbjct: 78  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPEV 226
           +  ++K  N +L E     + D             + +  R+  +GTP +MAPE  + +V
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 196
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP------- 279
           RG   F+ D W F  + IE+ TG  P       ++   +  + + P + +G+        
Sbjct: 197 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 254
Query: 280 --PAVENVLLGCFEYDLRSRPLMTDILR 305
              +   ++  C + D   RP   ++LR
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLR 282

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15  YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
           ++ F +SD         N + N  +  +   +   IGRG FGEV+           D   
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74  EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
             A+K L      +K+     L ER+    +       I  +        K+  I+    
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D+            +S     +GT  YMAPE  Q  V    S   D +   C + ++L 
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           G  P R  ++ D+     +       +P    P + ++L G  + D+  R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15  YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
           ++ F +SD         N + N  +  +   +   IGRG FGEV+           D   
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74  EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
             A+K L      +K+     L ER+    +       I  +        K+  I+    
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D+            +S     +GT  YMAPE  Q  V    S   D +   C + ++L 
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           G  P R  ++ D+     +       +P    P + ++L G  + D+  R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 70  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 291 RNLLQVDLTKR 301

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 41/289 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 8   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 60
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 61  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            +  +A G+  +     +  +L+  N ++ E     + D                L R +
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 161
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
               Y A      P +W  PE  + G  + ++D W F   + E+ T G  P  G    E+
Sbjct: 162 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
            D V R   + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 222 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 268

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 116 VINGKICIIMKFYEG-SVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
           V+  ++ ++MK   G SV D +  +      K G L  S +     ++ +G+  LH  G 
Sbjct: 83  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPEV 226
           +  ++K  N +L E     + D             + +  R+  +GTP +MAPE  + +V
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 201
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP------- 279
           RG   F+ D W F  + IE+ TG  P       ++   +  + + P + +G+        
Sbjct: 202 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 259
Query: 280 --PAVENVLLGCFEYDLRSRPLMTDILR 305
              +   ++  C + D   RP   ++LR
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLR 287

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             ++S   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y A      P +W  PE       S ++D W F   + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 21/264 (7%)
Query: 45  LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERLNDLFLKC 102
           +R  +G G FG+V LATHY + +      +VA+K +    +K+  M + +ER    +LK 
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQ------KVALKFISRQLLKKSDMHMRVER-EISYLKL 65
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
                I  L  +      I +++++  G + D + + K  +++     R+   +   I  
Sbjct: 66  LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEY 123
Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQW 222
            H   I+  +LKP N +L++     + D              + L    G+PNY APE  
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 223 QPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
             ++  GP   E D W     +  ML G  P     +  ++  V     +  +P  L P 
Sbjct: 180 NGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPG 234
Query: 282 VENVLLGCFEYDLRSRPLMTDILR 305
            ++++      D   R  + +I R
Sbjct: 235 AQSLIRRMIVADPMQRITIQEIRR 258

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  SA++    +G   FG+V+   H       ++   VA+K L    E  +R        
Sbjct: 23  ISLSAVRFMEELGEDRFGKVY-KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 98  LFLKCQGVEGICWL------QGISVI-----NGKI--CIIMKFYEGSVG----DRMAQLK 140
           L  + Q    +C L      Q +S+I     +G +   ++M+     VG    DR  +  
Sbjct: 82  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 139
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
              L   +       +A G+  L S  ++  +L   N ++ +     + D+         
Sbjct: 140 -SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY-- 196
Query: 201 XXXSSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              ++D  + LG  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG 
Sbjct: 197 ---AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           S  ++ + ++R +++ P P   P  V  +++ C+      RP   DI
Sbjct: 252 SNQDVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             ++S   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G 
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 29/283 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
           +AW  P  +L+L  ++G+G FGEVW+ T   +T        VA+K L P        L E
Sbjct: 8   DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 60
Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
                 L+ + +     +Q  +V++ +   I+  Y  +GS+ D +    G  L L  +  
Sbjct: 61  AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
            +  +A G+  +     +  +L+  N ++ E     + D              ++   R 
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF-----GLARLIEDNEWTARQ 170
Query: 212 GTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
           G      + APE     + G  + ++D W F   + E+ T G  P  G    E+ D V R
Sbjct: 171 GAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
              + P P   P ++ +++  C+  +   RP   + L+ F  D
Sbjct: 228 GYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 268

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 4   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 52
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 53  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 157
Query: 201 XXXSSDLPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y AP       +W  PE       S ++D W F   + E+ T G+
Sbjct: 158 -----GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 213 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
           +S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87  RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
            M V      + FLK   V        +  L G+        II++F   G++ D + + 
Sbjct: 55  TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
              +++   +   A  ++  +  L  K  +  +L   N ++ E     + D         
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
               +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 27  AVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPV 83
           A+  S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   
Sbjct: 2   AMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL--- 50
Query: 84  KEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRM 136
           KED M V      + FLK   V        +  L G+        II +F   G++ D +
Sbjct: 51  KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
            +    +++   +   A  ++  +  L  K  +  +L   N ++ E     + D      
Sbjct: 105 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
Query: 197 XXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                  +   +  P +   P  +A            S ++D W F   + E+ T G+ P
Sbjct: 165 MTGDTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSP 216
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 217 YPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 3   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 51
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 52  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 105
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 156
Query: 201 XXXSSDLPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y AP       +W  PE       S ++D W F   + E+ T G+
Sbjct: 157 -----GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 212 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
           I    G    +G+I I M+  +G   D++ + K G++    + + +I + +G+  L  K 
Sbjct: 69  IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            I+  ++KP N ++N      L D                    +GT +YM+PE+ Q   
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN-----EFVGTRSYMSPERLQGT- 181
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
               S ++D W    S++EM  G  PR   ++ E+ D +V   E PP    LP AV
Sbjct: 182 --HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV--NEPPP---KLPSAV 230

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 70  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 291 RNLLQVDLTKR 301

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 121/293 (41%), Gaps = 40/293 (13%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 3   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 51
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II++F   G++ D + +  
Sbjct: 52  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 105
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G 
Sbjct: 166 TXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 218 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 35  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 89  LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII---L 197
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 255
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 256 RNLLQVDLTKR 266

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 120/294 (40%), Gaps = 40/294 (13%)
Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
           +S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87  RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
            M V      + FLK   V        +  L G+        II +F   G++ D + + 
Sbjct: 55  TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
              +++   +   A  ++  +  L  K  +  +L   N ++ E     + D         
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
               +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 14/166 (8%)
Query: 147 SNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           S   ++A+D+A+G+  LH+   L+    LN +      +   R  + DV           
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF--------- 161
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
            S   P R+  P ++APE  Q +         D W FA  + E++T   P    S  EI 
Sbjct: 162 -SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
             V      P IP G+ P V  ++  C   D   RP    I+ + +
Sbjct: 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
           +S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87  RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
            M V      + FLK   V        +  L G+        II +F   G++ D + + 
Sbjct: 55  TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
              +++   +   A  ++  +  L  K  +  +L   N ++ E     + D         
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
               +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G
Sbjct: 169 DTXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 42  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 204
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 262
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 263 RNLLQVDLTKR 273

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 39/280 (13%)
Query: 43  LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           + ++H++G G FGEV+  +   Y  T        VAVK L   KED M V      + FL
Sbjct: 13  ITMKHKLGGGQFGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
           K   V        +  L G+        II +F   G++ D + +    ++S   +   A
Sbjct: 56  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
             ++  +  L  K  +  +L   N ++ E     + D             +   +  P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
              P  +A            S ++D W F   + E+ T G+ P  G    ++Y+ + +  
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 266

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 120/294 (40%), Gaps = 40/294 (13%)
Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
           +S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87  RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
            M V      + FLK   V        +  L G+        II +F   G++ D + + 
Sbjct: 55  TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
              +++   +   A  ++  +  L  K  +  +L   N ++ E     + D         
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
               +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           IK   + L+  +G G FG+V+LA  Y    + D+   VAVK L     D  R    R  +
Sbjct: 10  IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKI-LVAVKTLKDAS-DNARKDFHREAE 67
Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG------------GKLS 145
           L    Q  E I    G+ V    + ++ ++ +    ++  +  G             +L+
Sbjct: 68  LLTNLQH-EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
            S +   A  +A G++ L S+  +  +L   N ++ E     +GD             S+
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF-----GMSRDVYST 181
Query: 206 DLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
           D  R  G  + M P +W P    +    + E+D W     + E+ T G QP    S +E+
Sbjct: 182 DYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
            + + + + +   P   P  V  ++LGC++ +   R
Sbjct: 240 IECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMR 274

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 37/259 (14%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--------GTPNYMA 218
            ++  +LKP N ++++     + D                L +R+        GTP Y+A
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFG--------------LAKRVKGRTWXLCGTPEYLA 206
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
           PE     +    +   D W     I EM  G  P       +IY+ +V  +     PS  
Sbjct: 207 PEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 279 PPAVENVLLGCFEYDLRSR 297
              ++++L    + DL  R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX-XXXXXX 202
           +S ++V R    + +G+  LH   I+ L+LKP N +L+      LGD+            
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI--YPLGDIKIVDFGMSRKIG 185
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
            + +L   +GTP Y+APE    +   PI+  TD W        +LT   P  G    E Y
Sbjct: 186 HACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 37/259 (14%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--------GTPNYMA 218
            ++  +LKP N ++++     + D                L +R+        GTP Y+A
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFG--------------LAKRVKGRTWXLCGTPEYLA 206
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
           PE     +    +   D W     I EM  G  P       +IY+ +V  +     PS  
Sbjct: 207 PEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 279 PPAVENVLLGCFEYDLRSR 297
              ++++L    + DL  R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 4   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 52
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 53  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 157
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y A      P +W  PE       S ++D W F   + E+ T G+
Sbjct: 158 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 213 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 43  LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           + ++H++G G +GEV+  +   Y  T        VAVK L   KED M V      + FL
Sbjct: 13  ITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
           K   V        +  L G+        II++F   G++ D + +    ++S   +   A
Sbjct: 56  KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
             ++  +  L  K  +  +L   N ++ E     + D             +   +  P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
              P  +A            S ++D W F   + E+ T G+ P  G    ++Y+ + +  
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 266

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G 
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 52/301 (17%)
Query: 29  ATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKE 85
           A   + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KE
Sbjct: 2   AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KE 50
Query: 86  DRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
           D M V      + FLK   V        +  L G+        II +F   G++ D + +
Sbjct: 51  DTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 104
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
               +++   +   A  ++  +  L  K  +  +L   N ++ E     + D        
Sbjct: 105 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF------- 157
Query: 199 XXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT- 248
                   L R +    Y A      P +W  PE       S ++D W F   + E+ T 
Sbjct: 158 -------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           G+ P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F+
Sbjct: 211 GMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
Query: 309 S 309
           +
Sbjct: 270 T 270

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
           QG+  LH+  ++  +LK  N  LN+     +GD                L    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 52/299 (17%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 15  SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 63
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 64  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 117
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 118 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 168
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
                 L R +    Y A      P +W  PE       S ++D W F   + E+ T G+
Sbjct: 169 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P  G  + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 224 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 281

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 31  SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           S + + W ++ + + ++H++G G +GEV+  +   Y  T        VAVK L   KED 
Sbjct: 2   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88  MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
           M V      + FLK   V        +  L G+        II +F   G++ D + +  
Sbjct: 51  MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
             +++   +   A  ++  +  L  K  +  +L   N ++ E     + D          
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
              +   +  P +   P  +A            S ++D W F   + E+ T G+ P  G 
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
           QG+  LH+  ++  +LK  N  LN+     +GD                L    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 19/268 (7%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           I  S +K+   IG G FGEV           E C     VA+K L     +R R   E L
Sbjct: 13  IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC-----VAIKTLKGGYTERQR--REFL 65
Query: 96  NDLFLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
           ++  +  Q     I  L+G+   +  + I+ +F E    D   +L  G+ ++  +     
Sbjct: 66  SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
            +A G+  L     +  +L   N ++N     ++  V            SSD P    + 
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSD-PTETSSL 181
Query: 215 NYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               P +W  PE      F +  D+W +   + E+++ G +P    S  ++ +A+ +   
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 241
Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +PP P   P ++  ++L C++ D  +RP
Sbjct: 242 LPP-PPDCPTSLHQLMLDCWQKDRNARP 268

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ +  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I +M  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 42/282 (14%)
Query: 42  ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLF 99
            LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     L   N   
Sbjct: 10  TLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAFLAEAN--L 57
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
           +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ +   A  +A+
Sbjct: 58  MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
           G+  +  +  +  NL+  N ++++     + D                L R +    Y A
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADF--------------GLARLIEDNEYTA 162
Query: 219 ------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
                 P +W  PE    G  + ++D W F   + E++T G  P  G +  E+   + R 
Sbjct: 163 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 222
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
             +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 223 YRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 262

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 70  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 291 RNLLQVDLTKR 301

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAVKI+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++    L  LF     +K      I  L  +      + ++M++  G  V D +  +  G
Sbjct: 51  QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           ++           +   +   H K I+  +LK  N +L+      + D            
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
             + L    G+P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
            + V+R +    IP  +    EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 19/268 (7%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           I  S +K+   IG G FGEV           E C     VA+K L     +R R   E L
Sbjct: 11  IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC-----VAIKTLKGGYTERQR--REFL 63
Query: 96  NDLFLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
           ++  +  Q     I  L+G+   +  + I+ +F E    D   +L  G+ ++  +     
Sbjct: 64  SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
            +A G+  L     +  +L   N ++N     ++  V            SSD P    + 
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSD-PTYTSSL 179
Query: 215 NYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
               P +W  PE      F +  D+W +   + E+++ G +P    S  ++ +A+ +   
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 239
Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           +PP P   P ++  ++L C++ D  +RP
Sbjct: 240 LPP-PPDCPTSLHQLMLDCWQKDRNARP 266

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 27/246 (10%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQGV 105
           IGRG FGEV +     +TE        A+KIL+    +K        E  + L      V
Sbjct: 98  IGRGAFGEVAVVK-MKNTERI-----YAMKILNKWEMLKRAETACFREERDVL------V 145
Query: 106 EGIC-WLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQG 159
            G C W+  +         + ++M +Y G  GD +  L   +  L  ++ R+ I ++   
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
           I  +H    +  ++KP N +L+      L D              S +   +GTP+Y++P
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISP 261
Query: 220 E--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           E  Q   +  G    E D W     + EML G  P    S+ E Y  ++  +E    PS 
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 321
Query: 278 LPPAVE 283
           +    E
Sbjct: 322 VTDVSE 327

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 111/280 (39%), Gaps = 39/280 (13%)
Query: 43  LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
           + ++H++G G +GEV+  +   Y  T        VAVK L   KED M V      + FL
Sbjct: 13  ITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
           K   V        +  L G+        II +F   G++ D + +    ++S   +   A
Sbjct: 56  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
             ++  +  L  K  +  +L   N ++ E     + D             +   +  P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
              P  +A            S ++D W F   + E+ T G+ P  G    ++Y+ + +  
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +   P G P  V  ++  C++++   RP   +I + F++
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 266

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 33  DTNAWIKPSAL-KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           D +A   P+ + +L   +G G +G+V+   H  + +        A+K++  V  D    +
Sbjct: 15  DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ------LAAIKVMD-VTGDEEEEI 67
Query: 92  LERLNDLFLKCQGVEGICWLQGISV------INGKICIIMKFY-EGSVGDRMAQLKGGKL 144
            + +N +  K      I    G  +      ++ ++ ++M+F   GSV D +   KG  L
Sbjct: 68  KQEIN-MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
               +     ++ +G+  LH   ++  ++K  N +L E     L D              
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 205 SDLPRRLGTPNYMAPE----QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
           +     +GTP +MAPE       P+      F++D W    + IEM  G  P C
Sbjct: 187 NTF---IGTPYWMAPEVIACDENPD--ATYDFKSDLWSLGITAIEMAEGAPPLC 235

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 33/265 (12%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLK---- 101
           R+G G +GEV+      S ED   Y     + + P +  +DR R L E  +   +     
Sbjct: 64  RLGHGSYGEVFKVR---SKEDGRLY--AVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
           C  +E      GI  +  ++C       G    +  +  G  L  + V+ Y  D    + 
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-------GPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            LHS+G++ L++KP N  L    R  LGD                   + G P YMAPE 
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPEL 227
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQEIPP-IPSGLP 279
            Q    G      D +    +I+E+   ++ P  G    ++     R+  +PP   +GL 
Sbjct: 228 LQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-----RQGYLPPEFTAGLS 278
Query: 280 PAVENVLLGCFEYDLRSRPLMTDIL 304
             + +VL+   E D + R     +L
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALL 303

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 27/246 (10%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQGV 105
           IGRG FGEV +     +TE        A+KIL+    +K        E  + L      V
Sbjct: 82  IGRGAFGEVAVVK-MKNTERI-----YAMKILNKWEMLKRAETACFREERDVL------V 129
Query: 106 EGIC-WLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQG 159
            G C W+  +         + ++M +Y G  GD +  L   +  L  ++ R+ I ++   
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
           I  +H    +  ++KP N +L+      L D              S +   +GTP+Y++P
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISP 245
Query: 220 EQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           E  Q    G   +  E D W     + EML G  P    S+ E Y  ++  +E    PS 
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 305
Query: 278 LPPAVE 283
           +    E
Sbjct: 306 VTDVSE 311

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAVKI+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++    L  LF     +K      I  L  +      + ++M++  G  V D +  +  G
Sbjct: 51  QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           ++           +   +   H K I+  +LK  N +L+      + D            
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
             + L    G+P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
            + V+R +    IP  +    EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 21/248 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDL 294
               + DL
Sbjct: 270 RNLLQVDL 277

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 27/275 (9%)
Query: 43  LKLRHRIGRGPFGEVWLA-----THYLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERL 95
           L L  +IGRG FGEV+          ++ + C E    ++  K L   +           
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----------- 164
Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
               LK      I  L G+      I I+M+  +G       + +G +L +  + +   D
Sbjct: 165 ---ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
            A G+  L SK  +  +L   N ++ E +   + D             +S   R++    
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV-K 280
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
           + APE       G  S E+D W F   + E  + G  P    S  +  + V +   +P  
Sbjct: 281 WTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-C 336
Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           P   P AV  ++  C+ Y+   RP  + I +  +S
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           IK   + L+  +G G FG+V+LA  H L  E   +   VAVK L    E   R   +R  
Sbjct: 38  IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 94
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
           +L    Q  + I    G+      + ++ ++      +R  +  G              G
Sbjct: 95  ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
            L L  +   A  +A G++ L     +  +L   N ++ +     +GD            
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 208
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
            S+D  R  G    M P +W P    +    + E+D W F   + E+ T G QP    S 
Sbjct: 209 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            E  D + + +E+   P   PP V  ++ GC++ + + R  + D+
Sbjct: 267 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 310

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 44  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 98  LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 206
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 264
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 265 RNLLQVDLTKR 275

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 121 ICIIMKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNL 173
           +C++M++ EG  G     L G +     + ++   + +  +QG+  LHS   K ++  +L
Sbjct: 74  VCLVMEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 174 KPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE 233
           KP N +L        G V             + +    G+  +MAPE ++       S +
Sbjct: 132 KPPNLLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEK 183
Query: 234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLL 287
            D + +   + E++T  +P      DEI     R          PP+   LP  +E+++ 
Sbjct: 184 CDVFSWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 238
Query: 288 GCFEYDLRSRPLMTDILRVF 307
            C+  D   RP M +I+++ 
Sbjct: 239 RCWSKDPSQRPSMEEIVKIM 258

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 121 ICIIMKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNL 173
           +C++M++ EG  G     L G +     + ++   + +  +QG+  LHS   K ++  +L
Sbjct: 75  VCLVMEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 174 KPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE 233
           KP N +L        G V             + +    G+  +MAPE ++       S +
Sbjct: 133 KPPNLLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEK 184
Query: 234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLL 287
            D + +   + E++T  +P      DEI     R          PP+   LP  +E+++ 
Sbjct: 185 CDVFSWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 239
Query: 288 GCFEYDLRSRPLMTDILRVF 307
            C+  D   RP M +I+++ 
Sbjct: 240 RCWSKDPSQRPSMEEIVKIM 259

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           IK   + L+  +G G FG+V+LA  H L  E   +   VAVK L    E   R   +R  
Sbjct: 9   IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 65
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
           +L    Q  + I    G+      + ++ ++      +R  +  G              G
Sbjct: 66  ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
            L L  +   A  +A G++ L     +  +L   N ++ +     +GD            
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 179
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
            S+D  R  G    M P +W P    +    + E+D W F   + E+ T G QP    S 
Sbjct: 180 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            E  D + + +E+   P   PP V  ++ GC++ + + R  + D+
Sbjct: 238 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 281

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 27/275 (9%)
Query: 43  LKLRHRIGRGPFGEVWLA-----THYLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERL 95
           L L  +IGRG FGEV+          ++ + C E    ++  K L   +           
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----------- 164
Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
               LK      I  L G+      I I+M+  +G       + +G +L +  + +   D
Sbjct: 165 ---ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
            A G+  L SK  +  +L   N ++ E +   + D             +S   R++    
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV-K 280
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
           + APE       G  S E+D W F   + E  + G  P    S  +  + V +   +P  
Sbjct: 281 WTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-C 336
Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           P   P AV  ++  C+ Y+   RP  + I +  +S
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + +   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + +   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           IK   + L+  +G G FG+V+LA  H L  E   +   VAVK L    E   R   +R  
Sbjct: 15  IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 71
Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
           +L    Q  + I    G+      + ++ ++      +R  +  G              G
Sbjct: 72  ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
            L L  +   A  +A G++ L     +  +L   N ++ +     +GD            
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 185
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
            S+D  R  G    M P +W P    +    + E+D W F   + E+ T G QP    S 
Sbjct: 186 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            E  D + + +E+   P   PP V  ++ GC++ + + R  + D+
Sbjct: 244 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 287

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + +   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 42  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 204
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 262
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 263 RNLLQVDLTKR 273

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG + +V L    +  +  D  + + V     V +D     ++    +F +      +
Sbjct: 17  IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L        ++  ++++  G  GD M  + +  KL   +   Y+ +++  +  LH +G
Sbjct: 73  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
           I+  +LK  N +L+      L D             +S      GTPNY+APE  + E  
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 187
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
           G   F  D W     + EM+ G  P
Sbjct: 188 G---FSVDWWALGVLMFEMMAGRSP 209

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAV+I+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVRII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++    L  LF     +K      I  L  +      + ++M++  G  V D +  +  G
Sbjct: 51  QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           ++           +   +   H K I+  +LK  N +L+      + D            
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
             + L    G+P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E+
Sbjct: 166 -GNKLDEFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
            + V+R +    IP  +    EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 31/265 (11%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAVKI+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++    L  LF     +K      I  L  +      + ++M++  G  V D +  +  G
Sbjct: 51  QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           ++           +   +   H K I+  +LK  N +L+      + D            
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
             + L    G P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E+
Sbjct: 166 -GNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
            + V+R +    IP  +    EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 25/290 (8%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 20  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 79  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 136
Query: 144 --------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
                   L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D     
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 196 XXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 254
                         RL    +MAPE     V    + ++D W F   + E+ + G  P  
Sbjct: 197 DIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+AP      +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAP---AIIL 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG + +V L    +  +  D  + + V     V +D     ++    +F +      +
Sbjct: 28  IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L        ++  ++++  G  GD M  + +  KL   +   Y+ +++  +  LH +G
Sbjct: 84  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
           I+  +LK  N +L+      L D             +S      GTPNY+APE  + E  
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 198
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
           G   F  D W     + EM+ G  P
Sbjct: 199 G---FSVDWWALGVLMFEMMAGRSP 220

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG + +V L    +  +  D  + + V     V +D     ++    +F +      +
Sbjct: 13  IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L        ++  ++++  G  GD M  + +  KL   +   Y+ +++  +  LH +G
Sbjct: 69  VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
           I+  +LK  N +L+      L D             +S      GTPNY+APE  + E  
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 183
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
           G   F  D W     + EM+ G  P
Sbjct: 184 G---FSVDWWALGVLMFEMMAGRSP 205

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           R+GRG FGEV    H +  +D     + AVK        ++R+ + R+ +L + C G+  
Sbjct: 65  RVGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 109
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
             I  L G       + I M+  E GS+G  + Q+  G L       Y     +G+  LH
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 167
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
           ++ IL  ++K  N +L ++  RA L D              S L      GT  +MAPE 
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
               V G P   + D W   C ++ ML G  P
Sbjct: 228 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 255

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 23/288 (7%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   L L   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 18  DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 77  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
                 L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D       
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
                       RL    +MAPE     V    + ++D W F   + E+ + G  P  G 
Sbjct: 195 YKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 251 KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           R+GRG FGEV    H +  +D     + AVK        ++R+ + R+ +L + C G+  
Sbjct: 81  RVGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 125
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
             I  L G       + I M+  E GS+G  + Q+  G L       Y     +G+  LH
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 183
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
           ++ IL  ++K  N +L ++  RA L D              S L      GT  +MAPE 
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
               V G P   + D W   C ++ ML G  P
Sbjct: 244 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 271

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IGRG + +V L    +  +  D  + + V     V +D     ++    +F +      +
Sbjct: 60  IGRGSYAKVLL----VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
             L        ++  ++++  G  GD M  + +  KL   +   Y+ +++  +  LH +G
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
           I+  +LK  N +L+      L D             +S      GTPNY+APE  + E  
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF---CGTPNYIAPEILRGEDY 230
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
           G   F  D W     + EM+ G  P
Sbjct: 231 G---FSVDWWALGVLMFEMMAGRSP 252

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 50  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 271 RNLLQVDLTKR 281

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 27/265 (10%)
Query: 37  WIKPSALKLR----HR--------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK 84
           W KP   K++    HR        IGRG FGEV +    +  ++ D+    A+KIL+  +
Sbjct: 58  WAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAV----VKLKNADKV--FAMKILNKWE 111
Query: 85  E-DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-- 141
              R      R     L     + I  L      +  + ++M +Y G  GD +  L    
Sbjct: 112 MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG--GDLLTLLSKFE 169
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
            +L       Y  ++   I  +H    +  ++KP N +++      L D           
Sbjct: 170 DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229
Query: 202 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVD 259
              S +   +GTP+Y++PE  Q    G   +  E D W     + EML G  P    S+ 
Sbjct: 230 TVQSSVA--VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVEN 284
           E Y  ++  +E    P+ +    EN
Sbjct: 288 ETYGKIMNHKERFQFPTQVTDVSEN 312

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+    +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP Y+APE     +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAV+I+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVRII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
           ++    L  LF     +K      I  L  +      + ++M++  G  V D +  +  G
Sbjct: 51  QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           ++           +   +   H K I+  +LK  N +L+      + D            
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
             + L    G+P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
            + V+R +    IP  +    EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 43/290 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 16  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 65
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 66  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 122
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D                L R 
Sbjct: 123 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 168
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +  E
Sbjct: 169 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           +   + R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 229 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 276

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 25/253 (9%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   + Q     
Sbjct: 50  LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEK--RIQQAVNF 101
Query: 109 CWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLH 164
            +L  +      N  + +++++  G  G+  + L+  G+ S  +   YA  +      LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 165 SKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQP 224
           S  ++  +LKP N ++++     + D                     GTP Y+APE    
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII-- 211
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN 284
            +    +   D W     I EM  G  P       +IY+ +V  +     PS     +++
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKD 268
Query: 285 VLLGCFEYDLRSR 297
           +L    + DL  R
Sbjct: 269 LLRNLLQVDLTKR 281

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           R+GRG FGEV    H +  +D     + AVK        ++R+ + R+ +L + C G+  
Sbjct: 79  RLGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 123
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
             I  L G       + I M+  E GS+G  + Q+  G L       Y     +G+  LH
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 181
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
           ++ IL  ++K  N +L ++  RA L D              S L      GT  +MAPE 
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
               V G P   + D W   C ++ ML G  P
Sbjct: 242 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 269

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 43/290 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 61
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 62  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D                L R 
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 164
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +  E
Sbjct: 165 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           +   + R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 225 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 272

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 43/290 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 11  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 60
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 61  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 117
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D                L R 
Sbjct: 118 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 163
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +  E
Sbjct: 164 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           +   + R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 224 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 271

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 18/261 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G+G +G V+      +  D      +A+K + P ++ R    L     L    +    +
Sbjct: 16  LGKGTYGIVY------AGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSK 166
            +L   S  NG I I M+   G     + + K G L  +   +  Y   + +G+  LH  
Sbjct: 69  QYLGSFSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 167 GILVLNLKPFNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
            I+  ++K  N ++N     + + D             +       GT  YMAPE     
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKG 184
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
            RG      D W   C+IIEM TG  P    G     ++   + +   P IP  +    +
Sbjct: 185 PRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAK 242
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
             +L CFE D   R    D+L
Sbjct: 243 AFILKCFEPDPDKRACANDLL 263

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 43/290 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 56  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D                L R 
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 158
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +  E
Sbjct: 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           +   + R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 219 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 266

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 43/290 (14%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 1   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 50
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 51  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 107
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D                L R 
Sbjct: 108 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 153
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
           +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +  E
Sbjct: 154 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 213
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           +   + R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 214 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 261

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 66  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 14/183 (7%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADR 185
           GS+ + + +     +  S   ++A+D A+G   LH+   L+    LN +      +   R
Sbjct: 94  GSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTAR 153
Query: 186 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 245
               DV            S   P R   P ++APE  Q +         D W FA  + E
Sbjct: 154 ISXADVKF----------SFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWE 203
Query: 246 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           ++T   P    S  EI   V      P IP G+ P V  +   C   D   RP    I+ 
Sbjct: 204 LVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVP 263
Query: 306 VFK 308
           + +
Sbjct: 264 ILE 266

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 16  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 68
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 69  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 118
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 175
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 176 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 230
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 231 LSPEAKSLLAGLLKKDPKQR 250

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           YA ++  G+  LH + I+  +LKP N +L++     + D+               +  R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 18/261 (6%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G+G +G V+      +  D      +A+K + P ++ R    L     L    +    +
Sbjct: 30  LGKGTYGIVY------AGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSK 166
            +L   S  NG I I M+   G     + + K G L  +   +  Y   + +G+  LH  
Sbjct: 83  QYLGSFSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 167 GILVLNLKPFNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
            I+  ++K  N ++N     + + D             +       GT  YMAPE     
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKG 198
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
            RG      D W   C+IIEM TG  P    G     ++   + +   P IP  +    +
Sbjct: 199 PRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAK 256
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
             +L CFE D   R    D+L
Sbjct: 257 AFILKCFEPDPDKRACANDLL 277

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 13/229 (5%)
Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           K    K+ + +G+G F  V+ A      E      EVA+K++      +  ++    N++
Sbjct: 9   KIEDFKVGNLLGKGSFAGVYRA------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 99  FLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
            + CQ     I  L      +  + ++++       +R  + +    S +    +   + 
Sbjct: 63  KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
            G+L LHS GIL  +L   N +L       + D                L    GTPNY+
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPNYI 179
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           +PE       G    E+D W   C    +L G  P    +V    + VV
Sbjct: 180 SPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 11/182 (6%)
Query: 127 FYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 184
           F  G++ + + +LK  G  L+   +    + + +G+  +H+KG    +LKP N +L +  
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 185 RAVLGDVXXXXXXXXXXXXS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
           + VL D+            S       D   +  T +Y APE +  +    I   TD W 
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 239 FACSIIEMLTGVQPR--CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
             C +  M+ G  P     +  D +  AV  +  IP  P     A+  +L      D   
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQ 290
Query: 297 RP 298
           RP
Sbjct: 291 RP 292

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 22/268 (8%)
Query: 45  LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
            + ++G G FG+V L          +E      +++  + +DR +V +E++       + 
Sbjct: 26  FKRKLGSGAFGDVHLV---------EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 105 VEGICWLQGISVING--KICIIMKFYEG-SVGDRM--AQLKGGKLSLSNVFRYAIDLAQG 159
           ++    ++   V      + I+M+  EG  + +R+  AQ +G  LS   V      +   
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMA 218
           +   HS+ ++  +LKP N +    D +    +            S +      GT  YMA
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQ--DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG- 277
           PE ++ +V    +F+ D W     +  +LTG  P  G S++E+      ++    +    
Sbjct: 195 PEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP 250
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDILR 305
           L P   ++L      D   RP    +L 
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVLH 278

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
           YA ++  G+  LH + I+  +LKP N +L++     + D+               +  R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 66  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
           +G G FG V L  H    E  + Y   A+KIL   K  +++ +   LN+   L+      
Sbjct: 49  LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
           +  L+     N  + ++M++  G  G+  + L+  G+ S  +   YA  +      LHS 
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D                     GTP  +APE     +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEALAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
               + DL  R
Sbjct: 270 RNLLQVDLTKR 280

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 66  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 18  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 70
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 71  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 120
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 177
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 178 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 232
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 233 LSPEAKSLLAGLLKKDPKQR 252

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 66  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49  IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           +G+G FG+V          + A   L  E      EVA    H V E R   +L+     
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
           FL          L+     + ++C +M++  G  G+    L   ++      R Y  ++ 
Sbjct: 66  FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +  LHS+ ++  ++K  N +L++     + D              + +    GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E    P  
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVEG 107
           +G G FG+V +  H L+       H+VAVKIL+  K   + V+ + R     LK      
Sbjct: 24  LGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L  +      I ++M++  G  + D +   K G+L      R    +  G+   H  
Sbjct: 78  IIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N +L+    A + D                L    G+PNY APE     +
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRXSCGSPNYAAPEVISGRL 191
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
             GP   E D W     +  +L G  P     V  ++  +     I   P  L P+V ++
Sbjct: 192 YAGP---EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC--DGIFYTPQYLNPSVISL 246
Query: 286 LLGCFEYDLRSRPLMTDI 303
           L    + D   R  + DI
Sbjct: 247 LKHMLQVDPMKRATIKDI 264

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR----MRVLLERLNDL 98
           LK    +G G FG+V L  +    ++  E  +VAVK L P         ++  +E L +L
Sbjct: 23  LKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 99  FLKCQGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAID 155
           +      E I   +GI   +G   I +IM+F   GS+ + + + K  K++L    +YA+ 
Sbjct: 81  YH-----ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQ 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           + +G+  L S+  +  +L   N ++    +  +GD              +    R     
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--------------GVQPRCGRSVDEI 261
           + APE     ++      +D W F  ++ E+LT               + P  G+     
Sbjct: 195 WYAPECL---MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
               ++  +  P P   P  V  ++  C+E+   +R    +++  F++
Sbjct: 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR----MRVLLERLNDL 98
           LK    +G G FG+V L  +    ++  E  +VAVK L P         ++  +E L +L
Sbjct: 11  LKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 99  FLKCQGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAID 155
           +      E I   +GI   +G   I +IM+F   GS+ + + + K  K++L    +YA+ 
Sbjct: 69  YH-----ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQ 122
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
           + +G+  L S+  +  +L   N ++    +  +GD              +    R     
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--------------GVQPRCGRSVDEI 261
           + APE     ++      +D W F  ++ E+LT               + P  G+     
Sbjct: 183 WYAPECL---MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 239
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
               ++  +  P P   P  V  ++  C+E+   +R    +++  F++
Sbjct: 240 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 287

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
           +G+I I M+  +G   D++ + K G++    + + +I + +G+  L  K  I+  ++KP 
Sbjct: 95  DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 153
Query: 177 NFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
           N ++N      L D             S      +GT +YM+PE+ Q       S ++D 
Sbjct: 154 NILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDI 205
Query: 237 WGFACSIIEMLTGVQP----RCGRSVDEIYDAVVRRQEIPP-IPSGL 278
           W    S++EM  G  P        ++ E+ D +V   E PP +PSG+
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV--NEPPPKLPSGV 250

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
           +P   K    +G G F  V LA    ++       E A+KIL   H +KE+      R R
Sbjct: 5   RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 58
Query: 90  VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
            ++ RL+      L+   Q  E + +  G+S   NG++   ++             K G 
Sbjct: 59  DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 103
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
              +    Y  ++   +  LH KGI+  +LKP N +LNE     + D             
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +      +GT  Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 164 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 208

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 9   DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 68  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 186 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
           +P   K    +G G F  V LA    ++       E A+KIL   H +KE+      R R
Sbjct: 7   RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 60
Query: 90  VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
            ++ RL+      L+   Q  E + +  G+S   NG++   ++             K G 
Sbjct: 61  DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 105
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
              +    Y  ++   +  LH KGI+  +LKP N +LNE     + D             
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +      +GT  Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 166 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 210

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
           +L+  IG+G F +V LA H L+        EVAVKI+     D+ ++    L  LF    
Sbjct: 18  RLQKTIGKGNFAKVKLARHVLTG------REVAVKII-----DKTQLNPTSLQKLFREVR 66
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
            +K      I  L  +      + ++M++   G V D +  +  G++           + 
Sbjct: 67  IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIV 124
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
             +   H K I+  +LK  N +L+      + D              + L    G+P Y 
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADF----GFSNEFTVGNKLDTFCGSPPYA 180
Query: 218 APEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIP 272
           APE +Q  +  GP   E D W     +  +++G  P  G+++ E+ + V+R +  IP
Sbjct: 181 APELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
           +P   K    +G G F  V LA    ++       E A+KIL   H +KE+      R R
Sbjct: 6   RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 59
Query: 90  VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
            ++ RL+      L+   Q  E + +  G+S   NG++   ++             K G 
Sbjct: 60  DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 104
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
              +    Y  ++   +  LH KGI+  +LKP N +LNE     + D             
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +      +GT  Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 165 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 209

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
           +P   K    +G G F  V LA    ++       E A+KIL   H +KE+      R R
Sbjct: 8   RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 61
Query: 90  VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
            ++ RL+      L+   Q  E + +  G+S   NG++   ++             K G 
Sbjct: 62  DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 106
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
              +    Y  ++   +  LH KGI+  +LKP N +LNE     + D             
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +      +GT  Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 167 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 211

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
           +L   IG+G F +V LA H L+        EVA+KI+     D+ ++    L  LF    
Sbjct: 15  RLLKTIGKGNFAKVKLARHILTG------REVAIKII-----DKTQLNPTSLQKLFREVR 63
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKGGKLSLSNVFRYAIDL 156
            +K      I  L  +      + +IM++  G  V D + A  +  +    + FR  +  
Sbjct: 64  IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
            Q     H K I+  +LK  N +L+      + D                L    G+P Y
Sbjct: 124 VQ---YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----GGKLDTFCGSPPY 176
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE +Q  +  GP   E D W     +  +++G  P  G+++ E+ + V+R +    IP
Sbjct: 177 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 231
Query: 276 SGLPPAVENVL 286
             +    EN+L
Sbjct: 232 FYMSTDCENLL 242

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 14  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 63
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 64  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 121 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 175
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE       G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 176 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 232
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 233 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 274

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 23/275 (8%)
Query: 43  LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
           L+    +G G FG+V  AT + L  ED     +VAVK+L      D    L+  L  +  
Sbjct: 40  LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-----------GGKLSLSNV 149
             Q  E I  L G     G + +I ++     GD +  L+           G  L L ++
Sbjct: 98  LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
             ++  +AQG+  L SK  +  ++   N +L     A +GD                   
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
           RL    +MAPE     V    + ++D W +   + E+ + G+ P  G  V+  +  +V+ 
Sbjct: 215 RLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
                 P+  P  + +++  C+  +   RP    I
Sbjct: 271 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 20  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 79  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 136
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 197 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 252
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
Query: 121 ICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
           + ++M++Y G  GD +  L   G ++       Y  ++   I  +H  G +  ++KP N 
Sbjct: 136 LYLVMEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 179 ILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF----ET 234
           +L+      L D              S +   +GTP+Y++PE  Q    GP +     E 
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPEC 251
Query: 235 DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVL 286
           D W       EM  G  P    S  E Y  +V  +E   +P +  G+P    + +
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 7   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 56
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 57  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 113
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 114 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 168
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      P +W  PE    G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 169 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 225
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 226 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 267

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 15  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 64
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 65  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 121
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 122 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 176
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE       G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 177 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 233
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 234 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 275

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 56  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 167
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      P +W  PE    G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 168 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 266

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 23/275 (8%)
Query: 43  LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
           L+    +G G FG+V  AT + L  ED     +VAVK+L      D    L+  L  +  
Sbjct: 48  LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-----------GGKLSLSNV 149
             Q  E I  L G     G + +I ++     GD +  L+           G  L L ++
Sbjct: 106 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
             ++  +AQG+  L SK  +  ++   N +L     A +GD                   
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
           RL    +MAPE     V    + ++D W +   + E+ + G+ P  G  V+  +  +V+ 
Sbjct: 223 RLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
                 P+  P  + +++  C+  +   RP    I
Sbjct: 279 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 8   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 57
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 58  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 114
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 115 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 169
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      P +W  PE    G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 170 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 226
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 227 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 268

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 61
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 62  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 173
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE       G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 174 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 230
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 231 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 272

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           + W  P   LKL  R+G G FGEVW+  +       + + +VAVK L   K+  M     
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 56  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 167
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE       G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 168 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 266

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 55  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 171
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 232 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 287
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 288 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 9   DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I +F +   G+    L+  +       
Sbjct: 68  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 186 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 9   DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I +F +   G+    L+  +       
Sbjct: 68  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 186 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 18  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 77  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 195 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 18  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 77  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 195 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 23/288 (7%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   L L   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 18  DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 77  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
                 L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D       
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
                       RL    +MAPE     V    + ++D W F   + E+ + G  P  G 
Sbjct: 195 YKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 251 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 9   DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I +F +   G+    L+  +       
Sbjct: 68  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 186 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
           +L   IG+G F +V LA H L+ +      EVAVKI+     D+ ++    L  LF    
Sbjct: 10  RLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKTQLNSSSLQKLFREVR 58
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNV-FRYAIDL 156
            +K      I  L  +      + ++M++  G  V D +      K   +   FR  +  
Sbjct: 59  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA 118
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
            Q     H K I+  +LK  N +L+      + D              + L    G+P Y
Sbjct: 119 VQ---YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPY 171
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE +Q  +  GP   E D W     +  +++G  P  G+++ E+ + V+R +    IP
Sbjct: 172 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 226
Query: 276 SGLPPAVENVL 286
             +    EN+L
Sbjct: 227 FYMSTDCENLL 237

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 27/292 (9%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   LKL   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 18  DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 77  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
                     L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D   
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
                           RL    +MAPE     V    + ++D W F   + E+ + G  P
Sbjct: 195 ARDIYKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
           I    G    +G+I I M+  +G   D++ + K G++    + + +I + +G+  L  K 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            I+  ++KP N ++N      L D             S      +GT +YM+PE+ Q   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQ--- 176
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP----------RCGRSVDEIYDAVVRRQEIPP-IP 275
               S ++D W    S++EM  G  P          R   ++ E+ D +V   E PP +P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV--NEPPPKLP 234
Query: 276 SGL 278
           SG+
Sbjct: 235 SGV 237

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 31/251 (12%)
Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
           +L   IG+G F +V LA H L+        EVA+KI+     D+ ++    L  LF    
Sbjct: 18  RLLKTIGKGNFAKVKLARHILTG------REVAIKII-----DKTQLNPTSLQKLFREVR 66
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKGGKLSLSNVFRYAIDL 156
            +K      I  L  +      + +IM++  G  V D + A  +  +    + FR  +  
Sbjct: 67  IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 126
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
            Q     H K I+  +LK  N +L+      + D                L    G P Y
Sbjct: 127 VQ---YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----GGKLDAFCGAPPY 179
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE +Q  +  GP   E D W     +  +++G  P  G+++ E+ + V+R +    IP
Sbjct: 180 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 234
Query: 276 SGLPPAVENVL 286
             +    EN+L
Sbjct: 235 FYMSTDCENLL 245

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 21  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G V   + +L   K        Y  +LA  +   HSK
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLXGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG+G FGEV+         D      VA+KI+   + +     +++   +  +C     
Sbjct: 29  KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 81
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +    G  + + K+ IIM++  G  G  +  L+ G L  + +     ++ +G+  LHS+ 
Sbjct: 82  VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
            +  ++K  N +L+E     L D              +     +GTP +MAPE  +   +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIK---Q 193
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
                + D W    + IE+  G  P       ++   ++ +   P +       ++  + 
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 252
Query: 288 GCFEYDLRSRPLMTDILR 305
            C   +   RP   ++L+
Sbjct: 253 ACLNKEPSFRPTAKELLK 270

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 21  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G V   + +L   K        Y  +LA  +   HSK
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
           I   N  + I+M++ EG  GD  + +  G      L    V R    L   + + H +  
Sbjct: 75  IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
               +L  +LKP N  L+      LGD             + +    +GTP YM+PEQ  
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
              R   + ++D W   C + E+   + P    S  E+    +R  +   IP      + 
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
            ++          RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
           IGRG FGEV L  H  S +        A+K+L       + D      ER  D+      
Sbjct: 83  IGRGAFGEVQLVRHKASQK------VYAMKLLSKFEMIKRSDSAFFWEER--DIMAFANS 134
Query: 105 ---VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
              V+  C  Q     +  + ++M++  G  GD +  +    +       Y  ++   + 
Sbjct: 135 PWVVQLFCAFQD----DKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            +HS G++  ++KP N +L++     L D               D    +GTP+Y++PE 
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEV 246
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            + +   G    E D W     + EML G  P    S+   Y  ++  +     P
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTELCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 18  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 130 RVIHRDIKPENLLLGSA-----GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM----I 180
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 238
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 239 ISRLLKHNPSQRPMLREVL 257

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG+G FGEV+         D      VA+KI+   + +     +++   +  +C     
Sbjct: 14  KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 66
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +    G  + + K+ IIM++  G  G  +  L+ G L  + +     ++ +G+  LHS+ 
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
            +  ++K  N +L+E     L D              +     +GTP +MAPE  +   +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK---Q 178
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
                + D W    + IE+  G  P       ++   ++ +   P +       ++  + 
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 288 GCFEYDLRSRPLMTDILR 305
            C   +   RP   ++L+
Sbjct: 238 ACLNKEPSFRPTAKELLK 255

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA       + +    +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLA------REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G    + ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 128 KVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  + Y  + R +     P  +     +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCG 255
             Y++PE    +     S   D W   C I +++ G+ P R G
Sbjct: 198 AQYVSPELLTEKSAXKSS---DLWALGCIIYQLVAGLPPFRAG 237

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 21  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 35  NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
           +AW  P   LKL  R+G G  GEVW+  +       + + +VAVK L   K+  M     
Sbjct: 6   DAWEVPRETLKLVERLGAGQAGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92  LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
           L   N   +K    + +  L  + V    I II ++ E GS+ D +    G KL+++ + 
Sbjct: 56  LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
             A  +A+G+  +  +  +  +L+  N ++++     + D              ++   R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDAEXTAR 167
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
            G      + APE       G  + ++D W F   + E++T G  P  G +  E+   + 
Sbjct: 168 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
           R   +   P   P  +  ++  C++     RP   D LR    D
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLRSVLED 266

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 38/233 (16%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
              L+   Q  E + +  G+S    K   ++K+            K G    +    Y  
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSY--AKNGCLLKYIR----------KIGSFDETCTRFYTA 139
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
           ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT 
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTA 198
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
            Y++PE          S  +D W   C I +++ G+ P    +   I+  +++
Sbjct: 199 QYVSPELL---TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
           +IG+G FGEV+         D      VA+KI+   + +     +++   +  +C     
Sbjct: 14  KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 66
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
           +    G  + + K+ IIM++  G  G  +  L+ G L  + +     ++ +G+  LHS+ 
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
            +  ++K  N +L+E     L D              +     +GTP +MAPE  +   +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIK---Q 178
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
                + D W    + IE+  G  P       ++   ++ +   P +       ++  + 
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 288 GCFEYDLRSRPLMTDILR 305
            C   +   RP   ++L+
Sbjct: 238 ACLNKEPSFRPTAKELLK 255

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 57/285 (20%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 43  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 97  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 141
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 200
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
             Y++PE    +     S   D W   C I +++ G+ P    +   I+  +++ +    
Sbjct: 201 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--D 255
Query: 274 IPSGLPPA----VENVL-------LGCFEYD----LRSRPLMTDI 303
            P+   P     VE +L       LGC E +    L++ P    +
Sbjct: 256 FPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 15  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 126
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 127 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 182 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 236
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 237 SRLLKHNPSQRPMLREVL 254

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 181
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 239
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 240 ISRLLKHNPSQRPMLREVL 258

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 20  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 131
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 132 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 187 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 241
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 242 SRLLKHNPSQRPMLREVL 259

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 16/225 (7%)
Query: 27  AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK-ILHPVKE 85
           A  +  + N  +K   L+    +GRG +G V    H  S +       +AVK I   V  
Sbjct: 37  ACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQI------MAVKRIRATVNS 90
Query: 86  DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGK 143
              + LL  L D+ ++           G     G + I M+  + S+     Q+  KG  
Sbjct: 91  QEQKRLLMDL-DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT 149
Query: 144 LSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
           +    + + A+ + + +  LHSK  ++  ++KP N ++N   +  + D            
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA 209
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEM 246
            + D     G   YMAPE+  PE+     S ++D W    ++IE+
Sbjct: 210 KTIDA----GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 33  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 87  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 144
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 145 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 195
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 253
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 254 ISRLLKHNPSQRPMLREVL 272

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 42  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 154 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 204
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 262
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 263 ISRLLKHNPSQRPMLREVL 281

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 21  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 188 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 242
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 243 SRLLKHNPSQRPMLREVL 260

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
           I   N  + I+M++ EG  GD  + +  G      L    V R    L   + + H +  
Sbjct: 75  IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
               +L  +LKP N  L+      LGD             +      +GTP YM+PEQ  
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
              R   + ++D W   C + E+   + P    S  E+    +R  +   IP      + 
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
            ++          RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 26/291 (8%)
Query: 33  DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
           D + W  P   L L   +GRG FG+V  A  +   +       VAVK+L         R 
Sbjct: 19  DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
           L+  L  L      +  +  L   +   G + +I++F +   G+    L+  +       
Sbjct: 78  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 135
Query: 144 ---------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 194
                    L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D    
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 195 XXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPR 253
                          RL    +MAPE     V    + ++D W F   + E+ + G  P 
Sbjct: 196 RDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 254 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            G  +DE +   ++       P    P +   +L C+  +   RP  ++++
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 27/275 (9%)
Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
            +PS L     +G+G FG+    TH  + E       + +K L    E+  R  L+ +  
Sbjct: 7   FRPSDLIHGEVLGKGCFGQAIKVTHRETGE------VMVMKELIRFDEETQRTFLKEVK- 59
Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
             ++C     +    G+   + ++  I ++ +G     + +    +   S    +A D+A
Sbjct: 60  -VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL-----PRR-- 210
            G+  LHS  I+  +L   N ++ E    V+ D                L     P R  
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 211 ----LGTPNYMAPEQWQPEVRGPISFETDSWGFA---CSIIEMLTGVQPRCGRSVDEIYD 263
               +G P +MAPE            + D + F    C II  +        R++D  + 
Sbjct: 179 RYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FG 233
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             VR       P   PP+   + + C + D   RP
Sbjct: 234 LNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP 268

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 48/297 (16%)
Query: 24  LRTAVATSNDTNAWIKPSALKLRHRI-----------GRGPFGEV----------WLATH 62
            R+   + N     ++ S  K +HR+           G+G FG+V          + A  
Sbjct: 120 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 179
Query: 63  YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC 122
            L  E      EVA    H + E+R   +L+     FL          L+     + ++C
Sbjct: 180 ILKKEVIVAKDEVA----HTLTENR---VLQNSRHPFLTA--------LKYSFQTHDRLC 224
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKPFNFIL 180
            +M++  G  G+    L   ++   +  R Y  ++   +  LHS K ++  +LK  N +L
Sbjct: 225 FVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           ++     + D              + +    GTP Y+APE  +    G      D WG  
Sbjct: 283 DKDGHIKITDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLG 336
Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
             + EM+ G  P   +  +++++ ++   E    P  L P  +++L G  + D + R
Sbjct: 337 VVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 18  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 130 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM----I 180
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 238
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 239 ISRLLKHNPSQRPMLREVL 257

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 48/297 (16%)
Query: 24  LRTAVATSNDTNAWIKPSALKLRHRI-----------GRGPFGEV----------WLATH 62
            R+   + N     ++ S  K +HR+           G+G FG+V          + A  
Sbjct: 123 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 182
Query: 63  YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC 122
            L  E      EVA    H + E+R   +L+     FL          L+     + ++C
Sbjct: 183 ILKKEVIVAKDEVA----HTLTENR---VLQNSRHPFLTA--------LKYSFQTHDRLC 227
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKPFNFIL 180
            +M++  G  G+    L   ++   +  R Y  ++   +  LHS K ++  +LK  N +L
Sbjct: 228 FVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           ++     + D              + +    GTP Y+APE  +    G      D WG  
Sbjct: 286 DKDGHIKITDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLG 339
Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
             + EM+ G  P   +  +++++ ++   E    P  L P  +++L G  + D + R
Sbjct: 340 VVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 394

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 37  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 91  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 135
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NSFVGT 194
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
             Y++PE    +     S   D W   C I +++ G+ P    +   I+  +++ +   P
Sbjct: 195 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
                P A   VE +L       LGC E +    L++ P    +
Sbjct: 252 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 37  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 91  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 135
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGT 194
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
             Y++PE    +     S   D W   C I +++ G+ P    +   I+  +++ +   P
Sbjct: 195 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
                P A   VE +L       LGC E +    L++ P    +
Sbjct: 252 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 16  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 38  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 92  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 42  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 154 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM----I 204
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 262
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 263 ISRLLKHNPSQRPMLREVL 281

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 38  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 92  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 32/253 (12%)
Query: 29  ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
           ATS D    I     +L   IG+G F +V LA H L+ +      EVAVKI+     D+ 
Sbjct: 4   ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89  RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKG 141
           ++    L  LF      K      I  L  +      + ++ ++  G  V D + A  + 
Sbjct: 51  QLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX 110
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
            +      FR  +   Q     H K I+  +LK  N +L+      + D           
Sbjct: 111 KEKEARAKFRQIVSAVQ---YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF-- 165
Query: 202 XXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
              + L    G P Y APE +Q  +  GP   E D W     +  +++G  P  G+++ E
Sbjct: 166 --GNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 261 IYDAVVR-RQEIP 272
           + + V+R +  IP
Sbjct: 221 LRERVLRGKYRIP 233

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 16/259 (6%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
            +IG+G FGEV+         D      VA+KI+   + +     +++   +  +C    
Sbjct: 33  EKIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 85
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            +    G  + + K+ IIM++  G  G  +  L+ G L  + +     ++ +G+  LHS+
Sbjct: 86  YVTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSE 143
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
             +  ++K  N +L+E     L D              +     +GTP +MAPE  +   
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK--- 197
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
           +     + D W    + IE+  G  P       ++   ++ +   P +       ++  +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFV 256
Query: 287 LGCFEYDLRSRPLMTDILR 305
             C   +   RP   ++L+
Sbjct: 257 EACLNKEPSFRPTAKELLK 275

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 41  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 95  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 139
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGT 198
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 199 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 234

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 19  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 41  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 95  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 139
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 198
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 199 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 234

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 38  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 92  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA       +      +A+K+L   + ++  V  +   ++ ++       
Sbjct: 13  LGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE  +  +
Sbjct: 125 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
                 + D W       E L G  P    +  E Y  + R +     P  +     +++
Sbjct: 180 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 234
Query: 287 LGCFEYDLRSRPLMTDIL 304
               +++   RP++ ++L
Sbjct: 235 SRLLKHNPSQRPMLREVL 252

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 40  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 94  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
             Y++PE    +     S   D W   C I +++ G+ P
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
           I   N  + I+M++ EG  GD  + +  G      L    V R    L   + + H +  
Sbjct: 75  IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
               +L  +LKP N  L+      LGD             +      +GTP YM+PEQ  
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
              R   + ++D W   C + E+   + P    S  E+    +R  +   IP      + 
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
            ++          RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
           +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++ ++       
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L G      ++ +I+++   G+V   + +L   K        Y  +LA  +   HSK
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++KP N +L  A     G++            SS      GT +Y+ PE     +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
            G +  E  D W       E L G  P    +  E Y  + R +     P  +     ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
           +    +++   RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
           +G G F  V LA    ++       E A+KIL   H +KE+      R R ++ RL+   
Sbjct: 22  LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 97  --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
              L+   Q  E + +  G+S   NG++   ++             K G    +    Y 
Sbjct: 76  FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
            ++   +  LH KGI+  +LKP N +LNE     + D             +      +GT
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 179
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
             Y++PE    +     S   D W   C I +++ G+ P    +   I+  +++ +   P
Sbjct: 180 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
                P A   VE +L       LGC E +    L++ P    +
Sbjct: 237 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
           IGRG FGEV L  H  ST         A+K+L   +      +++R +  F         
Sbjct: 82  IGRGAFGEVQLVRHK-STRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 129
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                W+  +      +  + ++M++  G  GD +  +    +       Y  ++   + 
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            +HS G +  ++KP N +L+++    L D               D    +GTP+Y++PE 
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 245
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
            + +   G    E D W     + EML G  P    S+   Y  ++  +     P     
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 281 AVENVLLGC 289
           + E   L C
Sbjct: 306 SKEAKNLIC 314

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 123 IIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGI--LQLHSKGILVLNLKPFNF 178
           ++M+F     GD   +L  K   +  S   R  +D+A GI  +Q  +  I+  +L+  N 
Sbjct: 98  MVMEFV--PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 179 ILNEADR--AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
            L   D    V   V             S L   LG   +MAPE    E     + + D+
Sbjct: 156 FLQSLDENAPVCAKVADFSLSQQSVHSVSGL---LGNFQWMAPETIGAEEES-YTEKADT 211
Query: 237 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--IPPIPSGLPPAVENVLLGCFEYDL 294
           + FA  +  +LTG  P    S  +I    + R+E   P IP   PP + NV+  C+  D 
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 295 RSRPLMTDILR 305
           + RP  + I++
Sbjct: 272 KKRPHFSYIVK 282

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 123 IIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGI--LQLHSKGILVLNLKPFNF 178
           ++M+F     GD   +L  K   +  S   R  +D+A GI  +Q  +  I+  +L+  N 
Sbjct: 98  MVMEFV--PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 179 ILNEADR--AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
            L   D    V   V             S L   LG   +MAPE    E     + + D+
Sbjct: 156 FLQSLDENAPVCAKVADFGTSQQSVHSVSGL---LGNFQWMAPETIGAEEES-YTEKADT 211
Query: 237 WGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDL 294
           + FA  +  +LTG  P    S  +I +  ++R + + P IP   PP + NV+  C+  D 
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 295 RSRPLMTDILR 305
           + RP  + I++
Sbjct: 272 KKRPHFSYIVK 282

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 23/255 (9%)
Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
            +IG+G  G V+ A       D     EVA++ ++  ++ +  +++  +  L ++     
Sbjct: 27  EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 78
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
            I       ++  ++ ++M++  G S+ D + +    +  ++ V R  +   Q +  LHS
Sbjct: 79  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 135
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
             ++  N+K  N +L       L D              S +   +GTP +MAPE    +
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRK 192
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
             GP   + D W      IEM+ G  P    + +  +Y  ++     P +  P  L    
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 247
Query: 283 ENVLLGCFEYDLRSR 297
            + L  C E D+  R
Sbjct: 248 RDFLNRCLEMDVEKR 262

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 27/283 (9%)
Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           LK   ++G+G FG V +  +    ++  E   VAVK L    E+ +R     +    LK 
Sbjct: 13  LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 68
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
              + I   +G+    G+  + +IM++   GS+ D + + K  ++    + +Y   + +G
Sbjct: 69  LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 127
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
           +  L +K  +  NL   N ++   +R  +GD                         + AP
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRSVDEIYDA 264
           E          S  +D W F   + E+ T ++                + G+ +      
Sbjct: 188 ESL---TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 244
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
           +++     P P G P  +  ++  C+  ++  RP   D+ LRV
Sbjct: 245 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
           +G G FG+V +  H L+       H+VAVKIL+  K   + V+ +   ++  LK      
Sbjct: 19  LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L  +        ++M++  G  G+    + K G++      R    +   +   H  
Sbjct: 73  IIKLYQVISTPTDFFMVMEYVSG--GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N +L+    A + D                L    G+PNY APE     +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----GEFLRTSCGSPNYAAPEVISGRL 186
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
             GP   E D W     +  +L G  P     V  ++  +  R  +  IP  L  +V  +
Sbjct: 187 YAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATL 241
Query: 286 LLGCFEYDLRSRPLMTDI 303
           L+   + D   R  + DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 33/296 (11%)
Query: 19  DDSDHLRT-AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDE--YHEV 75
           DD + L T AV  SND         LK    IGRG F  V+     L TE   E  + E+
Sbjct: 9   DDIEELETKAVGXSNDGRF------LKFDIEIGRGSFKTVYKG---LDTETTVEVAWCEL 59
Query: 76  AVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG-ISVINGKICIIMKFYEGSVGD 134
             + L   +  R +   E L  L    Q    + +     S + GK CI++     + G 
Sbjct: 60  QDRKLTKSERQRFKEEAEXLKGL----QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGT 115
Query: 135 RMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKG--ILVLNLKPFN-FILNEADRAVLGD 190
               LK  K+    V R +   + +G+  LH++   I+  +LK  N FI        +GD
Sbjct: 116 LKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 175
Query: 191 VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV 250
           +            +      +GTP + APE ++ +    +    D + F    +E  T  
Sbjct: 176 LGLATLKRASFAKAV-----IGTPEFXAPEXYEEKYDESV----DVYAFGXCXLEXATSE 226
Query: 251 QP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
            P   C ++  +IY  V    +         P V+ ++ GC   +   R  + D+L
Sbjct: 227 YPYSEC-QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
           IGRG FGEV L  H  ST         A+K+L   +      +++R +  F         
Sbjct: 77  IGRGAFGEVQLVRH-KSTRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 124
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                W+  +      +  + ++M++  G  GD +  +    +       Y  ++   + 
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            +HS G +  ++KP N +L+++    L D               D    +GTP+Y++PE 
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 240
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
            + +   G    E D W     + EML G  P    S+   Y  ++  +     P     
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300
Query: 281 AVENVLLGC 289
           + E   L C
Sbjct: 301 SKEAKNLIC 309

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
           IGRG FGEV L  H  ST         A+K+L   +      +++R +  F         
Sbjct: 82  IGRGAFGEVQLVRHK-STRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 129
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                W+  +      +  + ++M++  G  GD +  +    +       Y  ++   + 
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
            +HS G +  ++KP N +L+++    L D               D    +GTP+Y++PE 
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 245
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
            + +   G    E D W     + EML G  P    S+   Y  ++  +     P     
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 281 AVENVLLGC 289
           + E   L C
Sbjct: 306 SKEAKNLIC 314

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
           +G G FG+V +  H L+       H+VAVKIL+  K   + V+ +   ++  LK      
Sbjct: 19  LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSK 166
           I  L  +        ++M++  G  G+    + K G++      R    +   +   H  
Sbjct: 73  IIKLYQVISTPTDFFMVMEYVSG--GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N +L+    A + D                L    G+PNY APE     +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----GEFLRDSCGSPNYAAPEVISGRL 186
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
             GP   E D W     +  +L G  P     V  ++  +  R  +  IP  L  +V  +
Sbjct: 187 YAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATL 241
Query: 286 LLGCFEYDLRSRPLMTDI 303
           L+   + D   R  + DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	620
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-31
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-31
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-31
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-29
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-29
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-29
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-28
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-27
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-27
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-27
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-26
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-26
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-26
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-26
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-25
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-25
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-25
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-24
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-24
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-24
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-23
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-23
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-22
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-22
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-21
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-21
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-21
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-20
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-20
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-18
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-18
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-17
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-16
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-15
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-15
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-14
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-14
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-14
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-14
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-13
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-13
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-13
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-12
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-12
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-12
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-12
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-11
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-11
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-11
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-10
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-10
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-10
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-09
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-09
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-09
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-09
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	9e-09
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-08
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-05
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-04

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  123 bits (311), Expect = 1e-31
 Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 46/301 (15%)

Query: 29  ATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKED 86
            + +  + W I    + +  RIG G FG V+             +H +VAVK+L+     
Sbjct: 11  GSRDAADDWEIPDGQITVGQRIGSGSFGTVYKGK----------WHGDVAVKMLNVTAPT 60

Query: 87  RMRV--------LLERLND----LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD 134
             ++        +L +       LF+      G            ++ I+ ++ EGS   
Sbjct: 61  PQQLQAFKNEVGVLRKTRHVNILLFM------GYS-------TAPQLAIVTQWCEGSSLY 107

Query: 135 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP 194
                   K  +  +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD G+ 
Sbjct: 108 HHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

Query: 195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQP 252
                    S    +  G+  +MAPE  + +   P SF++D + F   I+  E++TG  P
Sbjct: 168 TEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG--IVLYELMTGQLP 224

Query: 253 RCG-RSVDEIYDAVV---RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
                + D+I + V       ++  + S  P  ++ ++  C +     RP    IL   +
Sbjct: 225 YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284

Query: 309 S 309
            
Sbjct: 285 E 285

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  122 bits (309), Expect = 1e-31
 Identities = 57/289 (19%), Positives = 101/289 (34%), Gaps = 45/289 (15%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV------- 90
           I    L    ++     GE+W    +   +       + VK+L        +        
Sbjct: 7   IDFKQLNFLTKLNENHSGELWKGR-WQGND-------IVVKVLKVRDWSTRKSRDFNEEC 58

Query: 91  -LLERLND----LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKL 144
             L   +       L      G C     S       +I  +   GS+ + + +     +
Sbjct: 59  PRLRIFSHPNVLPVL------GAC----QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV 108

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLN--LKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
             S   ++A+D+A+G+  LH+   L+    L   + +++E   A +    +         
Sbjct: 109 DQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF------- 161

Query: 203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDE 260
            S   P R+  P ++APE  Q +         D W FA  ++  E++T   P    S  E
Sbjct: 162 -SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA--VLLWELVTREVPFADLSNME 218

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           I   V      P IP G+ P V  ++  C   D   RP    I+ + + 
Sbjct: 219 IGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  122 bits (307), Expect = 4e-31
 Identities = 52/272 (19%), Positives = 90/272 (33%), Gaps = 36/272 (13%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-------------R 94
            IG G FG+V+ A H +  +         +K    VK +  +   E              
Sbjct: 18  LIGSGGFGQVFKAKHRIDGK------TYVIKR---VKYNNEKAEREVKALAKLDHVNIVH 68

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
            N  +                     + I M+F + G++   + + +G KL         
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             + +G+  +HSK ++  +LKP N  L +  +  +GD G+   L           R  GT
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL----KNDGKRTRSKGT 184

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
             YM+PEQ           E D +     + E+L            + +  +        
Sbjct: 185 LRYMSPEQIS---SQDYGKEVDLYALGLILAELLHVCDT--AFETSKFFTDLRD----GI 235

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           I        + +L          RP  ++ILR
Sbjct: 236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  118 bits (298), Expect = 1e-29
 Identities = 57/306 (18%), Positives = 115/306 (37%), Gaps = 43/306 (14%)

Query: 25  RTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHP 82
           R A  TS     W I    L++   IG+G FG+V+             +H EVA++++  
Sbjct: 16  RKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGR----------WHGEVAIRLIDI 65

Query: 83  VKEDRMRV--------LLERL---NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGS 131
            +++  ++           +    N           +    G  +    + II    +G 
Sbjct: 66  ERDNEDQLKAFKREVMAYRQTRHEN-----------VVLFMGACMSPPHLAIITSLCKGR 114

Query: 132 VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 191
               + +     L ++   + A ++ +G+  LH+KGIL  +LK  N   +   + V+ D 
Sbjct: 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN-GKVVITDF 173

Query: 192 GI--PHLLLGIPLPSSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSI 243
           G+     +L        L  + G   ++APE          E + P S  +D +      
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233

Query: 244 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
            E+     P   +  + I   +    +      G+   + ++LL C+ ++   RP  T +
Sbjct: 234 YELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKL 293

Query: 304 LRVFKS 309
           + + + 
Sbjct: 294 MDMLEK 299

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  117 bits (296), Expect = 3e-29
 Identities = 55/275 (20%), Positives = 106/275 (38%), Gaps = 48/275 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH----PVKEDRMRV----LLERLN---- 96
           IG G FG+  L          ++  +  +K ++      KE         +L  +     
Sbjct: 32  IGEGSFGKAILVKST------EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85

Query: 97  ----DLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFR 151
               + F +                NG + I+M + E G +  R+   KG       +  
Sbjct: 86  VQYRESFEE----------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILD 129

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 210
           + + +   +  +H + IL  ++K  N  L +     LGD GI  +L      + +L R  
Sbjct: 130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS----TVELARAC 185

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 270
           +GTP Y++PE  + +   P + ++D W   C + E+ T        S+  +   ++    
Sbjct: 186 IGTPYYLSPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS- 241

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            PP+       + +++   F+ + R RP +  IL 
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  116 bits (292), Expect = 6e-29
 Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 49/311 (15%)

Query: 19  DDSDHLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EV 75
           D           + D +   I    L ++ +IG G FG V  A           +H  +V
Sbjct: 14  DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAE----------WHGSDV 63

Query: 76  AVKILHPVKEDRMRV--------LLERL---NDLFLKCQGVEGICWLQGISVINGKICII 124
           AVKIL        RV        +++RL   N           I    G       + I+
Sbjct: 64  AVKILMEQDFHAERVNEFLREVAIMKRLRHPN-----------IVLFMGAVTQPPNLSIV 112

Query: 125 MKFYE-GSVGDRMAQLKGG-KLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFIL 180
            ++   GS+   + +     +L        A D+A+G+  LH++   ++  NLK  N ++
Sbjct: 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172

Query: 181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           ++     + D G+  L     L S       GTP +MAPE  + E   P + ++D + F 
Sbjct: 173 DKKYTVKVCDFGLSRLKASTFLSSKSAA---GTPEWMAPEVLRDE---PSNEKSDVYSFG 226

Query: 241 CSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             +I  E+ T  QP    +  ++  AV  + +   IP  L P V  ++ GC+  +   RP
Sbjct: 227 --VILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRP 284

Query: 299 LMTDILRVFKS 309
               I+ + + 
Sbjct: 285 SFATIMDLLRP 295

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  112 bits (281), Expect = 1e-27
 Identities = 58/302 (19%), Positives = 106/302 (35%), Gaps = 59/302 (19%)

Query: 37  WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
            +  + ++   +IG+G FG V                 VA+K L     +    ++E+  
Sbjct: 15  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSV------VAIKSLILGDSEGETEMIEKFQ 68

Query: 97  D-----------------LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
           +                          G+              ++M+F   G +  R+  
Sbjct: 69  EFQREVFIMSNLNHPNIVKLY------GLMH--------NPPRMVMEFVPCGDLYHRLLD 114

Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEADRAV-----LGDV 191
            K   +  S   R  +D+A GI  + ++   ++  +L+  N  L   D        + D 
Sbjct: 115 -KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173

Query: 192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTG 249
           G+             +   LG   +MAPE    E     + + D++ FA  +I   +LTG
Sbjct: 174 GLSQQS------VHSVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFA--MILYTILTG 224

Query: 250 VQPRCGRSVDEI--YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
             P    S  +I   + +      P IP   PP + NV+  C+  D + RP  + I++  
Sbjct: 225 EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284

Query: 308 KS 309
             
Sbjct: 285 SE 286

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  111 bits (279), Expect = 4e-27
 Identities = 62/263 (23%), Positives = 98/263 (37%), Gaps = 27/263 (10%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV---KEDRMRVLLERLNDLFLKCQG 104
           R+G G +GEV+                 AVK         +DR R L E       K   
Sbjct: 64  RLGHGSYGEVFKVRSKEDGR------LYAVKRSMSPFRGPKDRARKLAEV--GSHEKVGQ 115

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
                 L+      G + +  +    S+        G  L  + V+ Y  D    +  LH
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLH 174

Query: 165 SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQ 223
           S+G++ L++KP N  L    R  LGD G     L + L ++     + G P YMAPE  Q
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFG-----LLVELGTAGAGEVQEGDPRYMAPELLQ 229

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
               G      D +    +I+E+   ++ P  G    ++    +     P   +GL   +
Sbjct: 230 ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP----PEFTAGLSSEL 281

Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
            +VL+   E D + R     +L 
Sbjct: 282 RSVLVMMLEPDPKLRATAEALLA 304

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  109 bits (275), Expect = 5e-27
 Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 51/295 (17%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  + L L   IG G FG+V+ A  ++  E       VAVK      ++ +   +E    
Sbjct: 4   IDFAELTLEEIIGIGGFGKVYRAF-WIGDE-------VAVKAARHDPDEDISQTIEN--- 52

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLS 147
              +    E           I  L+G+ +    +C++M+F  G  G     L G ++   
Sbjct: 53  -VRQ----EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG--GPLNRVLSGKRIPPD 105

Query: 148 NVFRYAIDLAQGILQLHSKGILVL---NLKPFNFILNEADRAV--------LGDVGIPHL 196
            +  +A+ +A+G+  LH + I+ +   +LK  N ++ +             + D G    
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG---- 161

Query: 197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRC 254
            L      +      G   +MAPE  +       S  +D W +   ++  E+LTG  P  
Sbjct: 162 -LAREWHRTTKMSAAGAYAWMAPEVIRAS---MFSKGSDVWSYG--VLLWELLTGEVPFR 215

Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           G     +   V   +   PIPS  P     ++  C+  D  SRP  T+IL    +
Sbjct: 216 GIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  111 bits (278), Expect = 2e-26
 Identities = 50/279 (17%), Positives = 101/279 (36%), Gaps = 44/279 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI--LHPVKEDRMRVL------LERLNDLFL 100
           IG G   +V+   +       ++    A+K   L       +         L +L     
Sbjct: 64  IGSGGSSKVFQVLN-------EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ---- 112

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
             Q  + I  L    + +  I ++M+     +   +   K   +       Y  ++ + +
Sbjct: 113 --QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAV 168

Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVG----IPHLLLGIPLPSSDLPRRLGTPNY 216
             +H  GI+  +LKP NF++ +     L D G    +      +   S      +G  NY
Sbjct: 169 HTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQ-----VGAVNY 222

Query: 217 MAPE--------QWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVV 266
           M PE        +   + +  IS ++D W   C +  M  G  P  +    + +++ A++
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-AII 281

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                   P      +++VL  C + D + R  + ++L 
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  109 bits (274), Expect = 2e-26
 Identities = 50/277 (18%), Positives = 105/277 (37%), Gaps = 40/277 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI--LHPVKEDRMRVL------LERLNDLFL 100
           IG G   +V+   +       ++    A+K   L       +         L +L     
Sbjct: 36  IGSGGSSKVFQVLN-------EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 85

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
                + I  L    + +  I ++M+     +   +   K   +       Y  ++ + +
Sbjct: 86  ---HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAV 140

Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMA 218
             +H  GI+  +LKP NF++ +     L D GI +    +   ++ + +   +GT NYM 
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYMP 196

Query: 219 PE--------QWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRR 268
           PE        +   + +  IS ++D W   C +  M  G  P  +    + +++ A++  
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH-AIIDP 255

Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                 P      +++VL  C + D + R  + ++L 
Sbjct: 256 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  109 bits (275), Expect = 2e-26
 Identities = 51/282 (18%), Positives = 108/282 (38%), Gaps = 40/282 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKI--LHPVKEDRMRVL------LERL 95
            +  +IG G   +V+   +       ++    A+K   L       +         L +L
Sbjct: 12  SILKQIGSGGSSKVFQVLN-------EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 64

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
                  Q  + I  L    + +  I ++M+     +   +   K   +       Y  +
Sbjct: 65  Q------QHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK--KKKSIDPWERKSYWKN 116

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGT 213
           + + +  +H  GI+  +LKP NF++ +     L D GI +    +   ++ + +   +GT
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ---MQPDTTSVVKDSQVGT 172

Query: 214 PNYMAPE--------QWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYD 263
            NYM PE        +   + +  IS ++D W   C +  M  G  P  +    + +++ 
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH- 231

Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           A++        P      +++VL  C + D + R  + ++L 
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  108 bits (272), Expect = 2e-26
 Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 42/285 (14%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV----LLE 93
           I    +++   +GRG FG V  A  + + +       VA+K +    E +  +     L 
Sbjct: 5   IDYKEIEVEEVVGRGAFGVVCKAK-WRAKD-------VAIKQIESESERKAFIVELRQLS 56

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKG-GKLSLSNVFR 151
           R+N           I  L G  +    +C++M++ E GS+ + +   +     + ++   
Sbjct: 57  RVNH--------PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106

Query: 152 YAIDLAQGILQLHS---KGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDL 207
           + +  +QG+  LHS   K ++  +LKP N +L      + + D G    +       + +
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI------QTHM 160

Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI-YDA 264
               G+  +MAPE ++       S + D + +   II  E++T  +P             
Sbjct: 161 TNNKGSAAWMAPEVFEGS---NYSEKCDVFSWG--IILWEVITRRKPFDEIGGPAFRIMW 215

Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            V     PP+   LP  +E+++  C+  D   RP M +I+++   
Sbjct: 216 AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  108 bits (272), Expect = 3e-26
 Identities = 58/286 (20%), Positives = 103/286 (36%), Gaps = 42/286 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLE--------- 93
               ++G G F  V L             H  A+K +    ++DR     E         
Sbjct: 32  LFIQKLGEGGFSYVDLVEGLHDG------HFYALKRILCHEQQDREEAQREADMHRLFNH 85

Query: 94  ----RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK--GGKLSL 146
               RL    L+ +G               +  +++ F++ G++ + + +LK  G  L+ 
Sbjct: 86  PNILRLVAYCLRERGA------------KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS- 205
             +    + + +G+  +H+KG    +LKP N +L +  + VL D+G  +        S  
Sbjct: 134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193

Query: 206 -----DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVD 259
                D   +  T +Y APE +  +    I   TD W   C +  M+ G  P        
Sbjct: 194 ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253

Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +     V+ Q   P       A+  +L      D   RP +  +L 
Sbjct: 254 DSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  108 bits (271), Expect = 2e-25
 Identities = 36/300 (12%), Positives = 79/300 (26%), Gaps = 53/300 (17%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-------------RMR 89
           L     +G+        AT   + E         V + +  +               R+R
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGE------SFEVHVPYFTERPPSNAIKQMKEEVLRLR 133

Query: 90  VLLERLN-----------------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSV 132
           +L    N                     K + +      + + V++     +    + ++
Sbjct: 134 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS--RFFLYPRMQSNL 191

Query: 133 GDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV 187
                 L         L      +  + + + +  LH  G++   L+P + +L++     
Sbjct: 192 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVF 251

Query: 188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ--WQPEVRGPISFETDSWGFACSIIE 245
           L             +           P   A     +       ++F  D+W    +I  
Sbjct: 252 LTGFEHLVRDGASAVSPIGRG--FAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309

Query: 246 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +     P    +     + + R          +P  V  +L G   Y    R L    + 
Sbjct: 310 IWCADLPNTDDAALGGSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  105 bits (263), Expect = 2e-25
 Identities = 53/285 (18%), Positives = 89/285 (31%), Gaps = 57/285 (20%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLE----------- 93
            IG G +G         S         +  K L        ++  ++ E           
Sbjct: 13  TIGTGSYGRCQKIRR-KSDG-----KILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66

Query: 94  --RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD-----RMAQLKGGKLSL 146
             R  D  +                 N  + I+M++ EG  GD          +   L  
Sbjct: 67  IVRYYDRIIDRT--------------NTTLYIVMEYCEG--GDLASVITKGTKERQYLDE 110

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLN-----LKPFNFILNEADRAVLGDVGIPHLLLGIP 201
             V R    L   + + H +           LKP N  L+      LGD G+  +L    
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--- 167

Query: 202 LPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
              +   +  +GTP YM+PEQ         + ++D W   C + E+   + P    S  E
Sbjct: 168 -HDTSFAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +   +   +    IP      +  ++          RP + +IL 
Sbjct: 224 LAGKIREGK-FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  105 bits (263), Expect = 4e-25
 Identities = 57/284 (20%), Positives = 98/284 (34%), Gaps = 42/284 (14%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKI--LHPVKEDRMRVLLE------------ 93
            +GRG FG V+ A +     D   Y   A+K   L   +  R +V+ E            
Sbjct: 12  CLGRGGFGVVFEAKN---KVDDCNY---AIKRIRLPNRELAREKVMREVKALAKLEHPGI 65

Query: 94  -RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK-LSLSNVF 150
            R  + +L+    +        S     + I M+     ++ D M      +    S   
Sbjct: 66  VRYFNAWLE----KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL---------LGIP 201
              + +A+ +  LHSKG++  +LKP N      D   +GD G+   +         L   
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
              +    ++GT  YM+PEQ         S + D +     + E+L              
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIH---GNSYSHKVDIFSLGLILFELLYP--FSTQMERVRT 236

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
               VR  + PP+ +   P    ++          RP   +I+ 
Sbjct: 237 LTD-VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  102 bits (255), Expect = 4e-24
 Identities = 57/296 (19%), Positives = 105/296 (35%), Gaps = 47/296 (15%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR------VL 91
            +PS L     +G+G FG+    TH  + E       + +K L    E+  R       +
Sbjct: 7   FRPSDLIHGEVLGKGCFGQAIKVTHRETGEV------MVMKELIRFDEETQRTFLKEVKV 60

Query: 92  LERL---NDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLS 147
           +  L   N           +    G+   + ++  I ++ + G++   + +    +   S
Sbjct: 61  MRCLEHPN-----------VLKFIGVLYKDKRLNFITEYIKGGTL-RGIIKSMDSQYPWS 108

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI----------PHLL 197
               +A D+A G+  LHS  I+  +L   N ++ E    V+ D G+          P  L
Sbjct: 109 QRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168

Query: 198 LGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRC 254
             +  P        +G P +MAPE            + D + F   I+  E++  V    
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMIN---GRSYDEKVDVFSFG--IVLCEIIGRVNADP 223

Query: 255 G-RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
                   +   VR       P   PP+   + + C + D   RP    +    ++
Sbjct: 224 DYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  102 bits (255), Expect = 5e-24
 Identities = 59/286 (20%), Positives = 111/286 (38%), Gaps = 54/286 (18%)

Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----HPVKEDRMRV-----LLERLN- 96
            +IGRG F EV+ A   L          VA+K +        + R        LL++LN 
Sbjct: 38  KKIGRGQFSEVYRAACLLDGV------PVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 97  -------DLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK--GGKLSL 146
                    F++                + ++ I+++  + G +   +   K     +  
Sbjct: 92  PNVIKYYASFIE----------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPE 135

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             V++Y + L   +  +HS+ ++  ++KP N  +       LGD+G+           + 
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS----KTT 191

Query: 207 LPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG--RSVDEIYD 263
                +GTP YM+PE+         +F++D W   C + EM     P  G   ++  +  
Sbjct: 192 AAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248

Query: 264 AVVRRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
            +  + + PP+PS      +  ++  C   D   RP +T +  V K
Sbjct: 249 KIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  102 bits (256), Expect = 8e-24
 Identities = 38/310 (12%), Positives = 82/310 (26%), Gaps = 64/310 (20%)

Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE------------- 85
           +P  L     +G+        AT   + E         V + +  +              
Sbjct: 71  RPRTLVRGTVLGQEDPYAYLEATDQETGE------SFEVHVPYFTERPPSNAIKQMKEEV 124

Query: 86  DRMRVLLERLN-----------------DLFLKCQGVEGICWLQGISVINGKICIIMKFY 128
            R+R+L    N                     K + +      + + V++     +    
Sbjct: 125 LRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS--RFFLYPRM 182

Query: 129 EGSVGDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
           + ++      L         L      +  + + + +  LH  G++   L+P + +L++ 
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR 242

Query: 184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--------RGPISFETD 235
               L             +          +  +  PE              R  ++F  D
Sbjct: 243 GGVFLTG-------FEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFD 295

Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
           +W     I  +     P    +     + + R          +P  V  +L G   Y   
Sbjct: 296 AWALGLVIYWIWCADLPITKDAALGGSEWIFRS------CKNIPQPVRALLEGFLRYPKE 349

Query: 296 SRPLMTDILR 305
            R L    + 
Sbjct: 350 DRLLPLQAME 359

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  101 bits (254), Expect = 1e-23
 Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 20/233 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            + H +G G F +V+ AT      D     +  +K+  P       +  + +  L  K  
Sbjct: 68  YVHHLLGEGAFAQVYEATQ-GDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERL--KPS 124

Query: 104 GVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK---GGKLSLSNVFRYAIDLAQG 159
                       +      ++ + Y  G++ + +   K      +    V  +A+ +   
Sbjct: 125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYM 184

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL----------LGIPLPSSDLPR 209
           I Q+H   I+  ++KP NFIL         +  +   L          + +    +    
Sbjct: 185 IEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTA 244

Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
           +  T  +   E    +   P +++ D +G A ++  ML G   +      E  
Sbjct: 245 KCETSGFQCVEMLSNK---PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.1 bits (245), Expect = 8e-23
 Identities = 65/292 (22%), Positives = 104/292 (35%), Gaps = 38/292 (13%)

Query: 19  DDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK 78
           ++ D     +    + +          R  +G+G +G V+      +         +A+K
Sbjct: 6   EEGDCESDLLEYDYEYDENGD------RVVLGKGTYGIVYAGRDLSNQV------RIAIK 53

Query: 79  ILHPVKEDRMRVL------LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GS 131
            +        + L       + L          + I    G    NG I I M+    GS
Sbjct: 54  EIPERDSRYSQPLHEEIALHKHLKH--------KNIVQYLGSFSENGFIKIFMEQVPGGS 105

Query: 132 VGDRMAQLKGGKLSLS-NVFR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-L 188
           +   + + K G L  +      Y   + +G+  LH   I+  ++K  N ++N     + +
Sbjct: 106 LSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKI 164

Query: 189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D G    L GI   +       GT  YMAPE      RG      D W   C+IIEM T
Sbjct: 165 SDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMAT 220

Query: 249 GVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
           G  P    G     ++  V   +  P IP  +    +  +L CFE D   R 
Sbjct: 221 GKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRA 271

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 98.3 bits (245), Expect = 1e-22
 Identities = 67/306 (21%), Positives = 103/306 (33%), Gaps = 34/306 (11%)

Query: 1   MAGKVAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLA 60
            + K+    P   + E    ++ L+       +   W+       + R+GRG FGEV   
Sbjct: 23  GSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMT-----HQPRVGRGSFGEVHRM 77

Query: 61  THYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGISVIN 118
               +        + AVK +  ++  R+   V    L+           I  L G     
Sbjct: 78  KDKQTGF------QCAVKKV-RLEVFRVEELVACAGLSS--------PRIVPLYGAVREG 122

Query: 119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
             + I M+  E GS+G  +   + G L       Y     +G+  LH++ IL  ++K  N
Sbjct: 123 PWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 180

Query: 178 FILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQPEVRG-PISFE 233
            +L+       L D G    L    L  S L      GT  +MAPE     V G P   +
Sbjct: 181 VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV----VMGKPCDAK 236

Query: 234 TDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 292
            D W   C ++ ML G  P                   I  IP    P     +      
Sbjct: 237 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRK 296

Query: 293 DLRSRP 298
           +   R 
Sbjct: 297 EPVHRA 302

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 98.6 bits (245), Expect = 2e-22
 Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 52/306 (16%)

Query: 39  KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM----RVLLER 94
               LKL   +  G    V+L       E      + A+K+     E+      R+    
Sbjct: 60  GERKLKLVEPLRVGDRSVVFLVRDVERLE------DFALKVFTMGAENSRSELERLHEAT 113

Query: 95  LNDLFLKCQGVEGICWLQGISV-----------------------INGKICIIMKFYEGS 131
                L  +  E     + + +                             ++M      
Sbjct: 114 FAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVD 173

Query: 132 VGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 186
           +    + L       G   +  +      L +    L SKG++  +  P N  +    R 
Sbjct: 174 LELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRL 233

Query: 187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
           +LGDV                      P   AP ++        +   ++W    SI  +
Sbjct: 234 MLGDVSALW-------KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286

Query: 247 LTGVQPRCGRSVDEIYDAVVRRQEIP-------PIPSGLPPAVENVLLGCFEYDLRSRPL 299
                P    +             +P          + LP  V+ ++     +D R R L
Sbjct: 287 WCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL 346

Query: 300 MTDILR 305
             + + 
Sbjct: 347 PLEAME 352

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 96.6 bits (241), Expect = 3e-22
 Identities = 44/275 (16%), Positives = 83/275 (30%), Gaps = 30/275 (10%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK-ILHPVKEDRMRVLLERLNDLFLKCQGVE 106
           +IG G FG V+     L           A+K    P+          R            
Sbjct: 18  KIGSGEFGSVFKCVKRLDGC------IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 107 GICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLS--NVFRYAIDLAQGILQL 163
            +         +  + I  ++   GS+ D +++            +    + + +G+  +
Sbjct: 72  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL------------LGIPLPSSDLPRRL 211
           HS  ++ +++KP N  ++                            LG     S      
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 191

Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQE 270
           G   ++A E  Q         + D +  A +++        PR G    EI     R+  
Sbjct: 192 GDSRFLANEVLQENY--THLPKADIFALALTVVCAAGAEPLPRNGDQWHEI-----RQGR 244

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +P IP  L      +L      D   RP    +++
Sbjct: 245 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 95.5 bits (238), Expect = 8e-22
 Identities = 52/286 (18%), Positives = 97/286 (33%), Gaps = 43/286 (15%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-------------R 94
            +G+G FG+V  A + L +         A+K +   +E    +L E             R
Sbjct: 13  VLGQGAFGQVVKARNALDSR------YYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
               +                     + I M++ E G++ D +   +         +R  
Sbjct: 67  YYAAW---LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLF 122

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI-----------PHLLLGIPL 202
             + + +  +HS+GI+  +LKP N  ++E+    +GD G+                 +P 
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182

Query: 203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
            S +L   +GT  Y+A E       G  + + D +       EM+       G     I 
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDG--TGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNIL 238

Query: 263 DAVVRRQEI---PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
              +R   I   P          + ++    ++D   RP    +L 
Sbjct: 239 K-KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 94.3 bits (235), Expect = 1e-21
 Identities = 60/301 (19%), Positives = 113/301 (37%), Gaps = 41/301 (13%)

Query: 19  DDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK 78
           DD + L T     ++   ++K         IGRG F  V+         D +   EVA  
Sbjct: 9   DDIEELETKAVGMSNDGRFLK-----FDIEIGRGSFKTVYKGL------DTETTVEVAWC 57

Query: 79  IL---HPVKEDRMRVLLE--RLNDL----FLKCQGVEGICWLQGISVINGKICIIMKFYE 129
            L      K +R R   E   L  L     ++        W   +      I ++ +   
Sbjct: 58  ELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD----SWESTVKG-KKCIVLVTELMT 112

Query: 130 -GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEADRA 186
            G++   +   +   + +  +  +   + +G+  LH++   ++  +LK  N  +     +
Sbjct: 113 SGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS 170

Query: 187 V-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 245
           V +GD+G     L     +S     +GTP +MAPE ++ +         D + F   ++E
Sbjct: 171 VKIGDLG-----LATLKRASFAKAVIGTPEFMAPEMYEEKY----DESVDVYAFGMCMLE 221

Query: 246 MLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           M T   P    ++  +IY  V    +         P V+ ++ GC   +   R  + D+L
Sbjct: 222 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281

Query: 305 R 305
            
Sbjct: 282 N 282

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 95.2 bits (237), Expect = 1e-21
 Identities = 56/312 (17%), Positives = 107/312 (34%), Gaps = 55/312 (17%)

Query: 37  WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMRVLLER 94
                 + L+  IG+G FGEVW             +   EVAVKI    +E       E 
Sbjct: 38  RTIARTIVLQESIGKGRFGEVWRGK----------WRGEEVAVKIFSSREERSWFREAEI 87

Query: 95  LNDLFLKCQGV---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
              + L+ + +            +     + ++  ++E GS+ D    L    +++  + 
Sbjct: 88  YQTVMLRHENILGFIAADNKDNGTWTQ--LWLVSDYHEHGSLFD---YLNRYTVTVEGMI 142

Query: 151 RYAIDLAQGILQLHSKGILVL--------NLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
           + A+  A G+  LH + +           +LK  N ++ +     + D+G+         
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202

Query: 203 PSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWG--FACSII--EMLTGVQPRCGR- 256
                P  R+GT  YMAPE     +     FE+      +A  ++  E+           
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSIN-MKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261

Query: 257 --------------SVDEIYDAVVRRQEIPPIPSGL-----PPAVENVLLGCFEYDLRSR 297
                         SV+E+   V  ++  P IP+          +  ++  C+  +  +R
Sbjct: 262 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321

Query: 298 PLMTDILRVFKS 309
                I +    
Sbjct: 322 LTALRIKKTLSQ 333

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 94.1 bits (234), Expect = 4e-21
 Identities = 48/283 (16%), Positives = 95/283 (33%), Gaps = 31/283 (10%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           L++R  +  G F  V+ A    S        E A+K L    E+     + +      K 
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSG------REYALKRL-LSNEEEKNRAIIQEVCFMKKL 82

Query: 103 QGVEGICWLQGISVI--------NGKICIIMKFYEGSVGDRMAQLK-GGKLSLSNVFRYA 153
            G   I      + I          +  ++ +  +G + + + +++  G LS   V +  
Sbjct: 83  SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF 142

Query: 154 IDLAQGILQLHSKGILVLN--LKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS------ 205
               + +  +H +   +++  LK  N +L+      L D G    +   P  S       
Sbjct: 143 YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRA 202

Query: 206 ---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
              +   R  TP Y  PE        PI  + D W   C +  +     P    +   I 
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262

Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +       IPP  +       +++    + +   R  + +++ 
Sbjct: 263 NGKYS---IPPHDT-QYTVFHSLIRAMLQVNPEERLSIAEVVH 301

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 92.0 bits (229), Expect = 1e-20
 Identities = 57/303 (18%), Positives = 110/303 (36%), Gaps = 49/303 (16%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           + L   +G+G +GEVW  + +           VAVKI     E       E  N + L+ 
Sbjct: 10  ITLLECVGKGRYGEVWRGS-WQGE-------NVAVKIFSSRDEKSWFRETELYNTVMLRH 61

Query: 103 QGVEG-ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
           + + G I         + ++ +I  ++E GS+ D    L+   L   +  R  + +A G+
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY---LQLTTLDTVSCLRIVLSIASGL 118

Query: 161 LQLHSKGILVLN--------LKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RL 211
             LH +              LK  N ++ +  +  + D+G+  +              R+
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178

Query: 212 GTPNYMAPE--QWQPEVRGPISFE-TDSWGFACSII--EMLTGVQPRCGR---------- 256
           GT  YMAPE      +V    S++  D   +A  ++  E+   +                
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDI--WAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236

Query: 257 -----SVDEIYDAVVRRQEIPPIPSGL-----PPAVENVLLGCFEYDLRSRPLMTDILRV 306
                S +++   V   Q+ P IP+         ++  ++  C+  +  +R     I + 
Sbjct: 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296

Query: 307 FKS 309
              
Sbjct: 297 LTK 299

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 92.5 bits (230), Expect = 1e-20
 Identities = 50/311 (16%), Positives = 106/311 (34%), Gaps = 53/311 (17%)

Query: 37  WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
                 +++  +IG+G +GEVW+           E  +VAVK+    +E       E   
Sbjct: 33  RTIAKQIQMVKQIGKGRYGEVWMGKW------RGE--KVAVKVFFTTEEASWFRETEIYQ 84

Query: 97  DLFLKCQGV---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRY 152
            + ++ + +            +    ++ +I  ++E GS+ D    LK   L   ++ + 
Sbjct: 85  TVLMRHENILGFIAAD--IKGTGSWTQLYLITDYHENGSLYD---YLKSTTLDAKSMLKL 139

Query: 153 AIDLAQGILQLHSKGILVLN--------LKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 204
           A     G+  LH++              LK  N ++ +     + D+G+    +      
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199

Query: 205 SDLPR-RLGTPNYMAPE--QWQPEVRGPISFE-TDSWGFACSII--EMLTGVQPRCGR-- 256
              P  R+GT  YM PE            S+   D   ++  +I  E+            
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM--YSFGLILWEVARRCVSGGIVEE 257

Query: 257 -------------SVDEIYDAVVRRQEIPPIPSGL-----PPAVENVLLGCFEYDLRSRP 298
                        S +++ + V  ++  P  P+          +  ++  C+ ++  SR 
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317

Query: 299 LMTDILRVFKS 309
               + +    
Sbjct: 318 TALRVKKTLAK 328

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 61/309 (19%), Positives = 118/309 (38%), Gaps = 59/309 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
            +   L+L     RG FG VW A         +E   VAVKI     +   +   E  + 
Sbjct: 21  FQSMPLQLLEVKARGRFGCVWKAQL------LNE--YVAVKIFPIQDKQSWQNEYEVYSL 72

Query: 98  LFLKCQGV---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
             +K + +    G    +  + ++  + +I  F+E GS+ D    LK   +S + +   A
Sbjct: 73  PGMKHENILQFIGAE--KRGTSVDVDLWLITAFHEKGSLSD---FLKANVVSWNELCHIA 127

Query: 154 IDLAQGILQLHSKGILVLN----------LKPFNFILNEADRAVLGDVGIPHLLLGIPLP 203
             +A+G+  LH     + +          +K  N +L     A + D G+  L       
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA-LKFEAGKS 186

Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG----FACSII--EMLTGVQPRCGR- 256
           + D   ++GT  YMAPE       G I+F+ D++     +A  ++  E+ +      G  
Sbjct: 187 AGDTHGQVGTRRYMAPEVL----EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242

Query: 257 ---------------SVDEIYDAVVRRQEIPPIPSGLPP-----AVENVLLGCFEYDLRS 296
                          S++++ + VV +++ P +            +   +  C+++D  +
Sbjct: 243 DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEA 302

Query: 297 RPLMTDILR 305
           R     +  
Sbjct: 303 RLSAGCVGE 311

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 17/259 (6%)

Query: 58  WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI 117
           WL T     ++  +   +  +           +    +    +     +        S  
Sbjct: 73  WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP 132

Query: 118 NGKICIIMKFYE-GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKP 175
              + I M+     ++ D M +    +           I +A+ +  LHSKG++  +LKP
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP 192

Query: 176 FNFILNEADRAVLGDVGI---------PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
            N      D   +GD G+            +L      +    ++GT  YM+PEQ     
Sbjct: 193 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH--- 249

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               S + D +     + E+L     +  R    I    VR  + P + +   P    ++
Sbjct: 250 GNNYSHKVDIFSLGLILFELLYSFSTQMERV--RIITD-VRNLKFPLLFTQKYPQEHMMV 306

Query: 287 LGCFEYDLRSRPLMTDILR 305
                     RP  TDI+ 
Sbjct: 307 QDMLSPSPTERPEATDIIE 325

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 85.0 bits (211), Expect = 3e-18
 Identities = 58/275 (21%), Positives = 103/275 (37%), Gaps = 50/275 (18%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RMRVLLE-----R 94
           +LR  +GRG  G+V+ A   +          VA+K++   +  D   R R+  E     R
Sbjct: 37  RLRRLVGRGGMGDVYEAEDTVRERI------VALKLMSETLSSDPVFRTRMQREARTAGR 90

Query: 95  LNDLFLKCQGVEGICWLQGISV-----INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSN 148
           L +          +     + +     I+G++ + M+   G  +   + +   G L+   
Sbjct: 91  LQE--------PHV-----VPIHDFGEIDGQLYVDMRLINGVDLAAMLRR--QGPLAPPR 135

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
                  +   +   H+ G    ++KP N +++  D A L D GI        L      
Sbjct: 136 AVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN- 194

Query: 209 RRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
             +GT  YMAPE+          ++  D +   C + E LTG  P  G  +  +   +  
Sbjct: 195 -TVGTLYYMAPER----FSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-- 247

Query: 268 RQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP 298
             +  P PS    G+P A + V+      +   R 
Sbjct: 248 -NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRY 281

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 84.9 bits (210), Expect = 4e-18
 Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 74/326 (22%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMR-----V 90
           +    LKL   IGRG +G V+  +               VAVK+                
Sbjct: 10  LDLDNLKLLELIGRGRYGAVYKGS----------LDERPVAVKVFSFANRQNFINEKNIY 59

Query: 91  LLERLND----LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS 145
            +  +       F+           +  +    +  ++M++Y  GS+      L      
Sbjct: 60  RVPLMEHDNIARFI------VGD-ERVTADGRMEYLLVMEYYPNGSLXK---YLSLHTSD 109

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLN---------LKPFNFILNEADRAVLGDVGIPHL 196
             +  R A  + +G+  LH++     +         L   N ++      V+ D G+   
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169

Query: 197 LLGIPLPSSDLP-----RRLGTPNYMAPE----QWQPEVRGPISFETDSWGFACSIIEML 247
           L G  L             +GT  YMAPE                + D +       E+ 
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229

Query: 248 TGVQPRC------------------GRSVDEIYDAVVRRQEIPPIP------SGLPPAVE 283
                                      + +++   V R ++ P  P      S    +++
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289

Query: 284 NVLLGCFEYDLRSRPLMTDILRVFKS 309
             +  C++ D  +R            
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAE 315

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 84.5 bits (209), Expect = 3e-17
 Identities = 52/271 (19%), Positives = 97/271 (35%), Gaps = 56/271 (20%)

Query: 44  KLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLE-----RL 95
           +++  I  G  G ++LA    ++         V +K L      E +   + E      +
Sbjct: 83  EVKGCIAHGGLGWIYLALDRNVNGRP------VVLKGLVHSGDAEAQAMAMAERQFLAEV 136

Query: 96  N--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLS 147
                    +                +  I      +M++  G     + + KG KL ++
Sbjct: 137 VHPSIVQIFN-----FVEHTDRHGDPVGYI------VMEYVGGQS---LKRSKGQKLPVA 182

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
               Y +++   +  LHS G++  +LKP N +L E ++  L D+G    +       +  
Sbjct: 183 EAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGAVSRI-------NSF 234

Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
               GTP + APE     VR   +  TD +    ++  +   +  R GR VD +      
Sbjct: 235 GYLYGTPGFQAPEI----VRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL------ 284

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
             E  P+      +   +L    + D R R 
Sbjct: 285 -PEDDPVLK-TYDSYGRLLRRAIDPDPRQRF 313

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 81.9 bits (202), Expect = 2e-16
 Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 29/259 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMR-VLLERLNDLFLKCQG 104
           IGRG FGEV+         D  + +  A+K L       +      L ER   +      
Sbjct: 197 IGRGGFGEVYGCRK----ADTGKMY--AMKCLDKKRIKMKQGETLALNER--IMLSLVST 248

Query: 105 VEG--ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGIL 161
            +   I  +        K+  I+    G  GD    L + G  S +++  YA ++  G+ 
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLE 306

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            +H++ ++  +LKP N +L+E     + D+G     L            +GT  YMAPE 
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMAPEV 361

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQP---RCGRSVDEIYDAVVRRQEIPPIPSGL 278
            Q  V        D +   C + ++L G  P      +   EI    +       +P   
Sbjct: 362 LQKGV--AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSF 417

Query: 279 PPAVENVLLGCFEYDLRSR 297
            P + ++L G  + D+  R
Sbjct: 418 SPELRSLLEGLLQRDVNRR 436

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 79.0 bits (195), Expect = 9e-16
 Identities = 40/269 (14%), Positives = 88/269 (32%), Gaps = 19/269 (7%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
             +  +G G  G +     +       +  +VAVK + P          +R   L  +  
Sbjct: 27  CPKDVLGHGAEGTIVYRGMF-------DNRDVAVKRILPECFS----FADREVQLLRESD 75

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               +              I ++    ++ + + Q K                  G+  L
Sbjct: 76  EHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHL 134

Query: 164 HSKGILVLNLKPFNFILNEAD-----RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
           HS  I+  +LKP N +++  +     +A++ D G+   L       S      GT  ++A
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPIPS 276
           PE    + +   ++  D +   C    +++      G+S+    + ++    +       
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                   ++      D + RP    +L+
Sbjct: 255 HEDVIARELIEKMIAMDPQKRPSAKHVLK 283

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 37/261 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           +G+G FG+V+LA      +  +++   A+K L     + +D +       RVL       
Sbjct: 25  LGKGSFGKVFLAEF----KKTNQFF--AIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL        C  Q        +  +M++  G  GD M  +    K  LS    YA ++ 
Sbjct: 79  FL----THMFCTFQ----TKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYAAEII 128

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
            G+  LHSKGI+  +LK  N +L++     + D G    +    +          GTP+Y
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG----MCKENMLGDAKTNTFCGTPDY 184

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE    +     +   D W F   + EML G  P  G+  +E++ ++      P  P 
Sbjct: 185 IAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPR 239

Query: 277 GLPPAVENVLLGCFEYDLRSR 297
            L    +++L+  F  +   R
Sbjct: 240 WLEKEAKDLLVKLFVREPEKR 260

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 76.2 bits (188), Expect = 4e-15
 Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 53/271 (19%)

Query: 49  IGRGPFGEVWLATH----------YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
           IG+G FG+V +             Y++ + C E +EV     +  KE     +++ L   
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR----NVFKE---LQIMQGLEHP 75

Query: 99  FLKCQGVEGICWLQGISVIN--------GKICIIMKFYEGSVGDRMAQL-KGGKLSLSNV 149
           FL                +N          + +++    G  GD    L +        V
Sbjct: 76  FL----------------VNLWYSFQDEEDMFMVVDLLLG--GDLRYHLQQNVHFKEETV 117

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
             +  +L   +  L ++ I+  ++KP N +L+E     + D  I  +L      ++    
Sbjct: 118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT---- 173

Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---RCGRSVDEIYDAVV 266
             GT  YMAPE +        SF  D W    +  E+L G +P   R   S  EI     
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
               +   PS     + ++L    E +   R
Sbjct: 234 --TTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 61/292 (20%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RMRVLLE-----R 94
           K+  ++G G    V+LA       D     +VA+K +    +E      R   E     +
Sbjct: 14  KIVDKLGGGGMSTVYLAE------DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67

Query: 95  LN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLS 145
           L+        D        E                ++M++ EG ++ + +     G LS
Sbjct: 68  LSHQNIVSMID-----VDEED-----------DCYYLVMEYIEGPTLSEYIES--HGPLS 109

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
           +     +   +  GI   H   I+  ++KP N +++      + D GI   L    L  +
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169

Query: 206 DLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YD 263
           +    LGT  Y +PEQ     +G      TD +     + EML G  P  G +   I   
Sbjct: 170 NH--VLGTVQYFSPEQ----AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223

Query: 264 AVVRRQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP-----LMTDILRV 306
            +  +  +P + +     +P ++ NV+L   E D  +R      +  D+  V
Sbjct: 224 HI--QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 75.9 bits (187), Expect = 8e-15
 Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 34/256 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           IGRG FGEV +       ++ D+    A+KIL     +K          R +L   +  +
Sbjct: 82  IGRGAFGEVAVVKL----KNADKVF--AMKILNKWEMLKRAETACFREERDVLVNGDSKW 135

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLA 157
           +           Q     +  + ++M +Y G  GD +  L     +L       Y  ++ 
Sbjct: 136 I----TTLHYAFQD----DNNLYLVMDYYVG--GDLLTLLSKFEDRLPEEMARFYLAEMV 185

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             I  +H    +  ++KP N +++      L D G    L+      S +   +GTP+Y+
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYI 243

Query: 218 APE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IP 272
           +PE  Q     +G    E D W     + EML G  P    S+ E Y  ++  +E    P
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303

Query: 273 PIPSGLPPAVENVLLG 288
              + +    ++++  
Sbjct: 304 TQVTDVSENAKDLIRR 319

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 75.4 bits (186), Expect = 9e-15
 Identities = 68/289 (23%), Positives = 106/289 (36%), Gaps = 45/289 (15%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    L L  +IGRG FGEV+                VAVK     +E     L  +   
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTL------VAVKSC---RETLPPDLKAK--- 158

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLS 145
            FL+    E           I  L G+      I I+M+  +G  GD +  L+  G +L 
Sbjct: 159 -FLQ----EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG--GDFLTFLRTEGARLR 211

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
           +  + +   D A G+  L SK  +  +L   N ++ E +   + D G     +       
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MSREEADG 266

Query: 206 DLPRRLGTPNY----MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
                 G         APE       G  S E+D W F   + E  + G  P    S  +
Sbjct: 267 VYAASGGLRQVPVKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + V +   +P  P   P AV  ++  C+ Y+   RP  + I +  +S
Sbjct: 324 TREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 75.5 bits (186), Expect = 9e-15
 Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 36/258 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           IGRG F EV +     + +        A+KI+     +K   +      R +L   +  +
Sbjct: 69  IGRGAFSEVAVVKMKQTGQVY------AMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLA 157
           +     +     Q        + ++M++Y G  GD +  L   G ++       Y  ++ 
Sbjct: 123 I----TQLHFAFQD----ENYLYLVMEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIV 172

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             I  +H  G +  ++KP N +L+      L D G    L       S +   +GTP+Y+
Sbjct: 173 MAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYL 230

Query: 218 APE----QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--- 270
           +PE           G    E D W       EM  G  P    S  E Y  +V  +E   
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290

Query: 271 IPPIPSGLPPAVENVLLG 288
           +P +  G+P    + +  
Sbjct: 291 LPLVDEGVPEEARDFIQR 308

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 73.8 bits (182), Expect = 2e-14
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 58/246 (23%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE---------- 93
            +   +GRG FG V       S++          K +     D++ V  E          
Sbjct: 8   MIAEDLGRGEFGIVHRCVE-TSSK-----KTYMAKFVKVKGTDQVLVKKEISILNIARHR 61

Query: 94  ---RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLS 147
               L++ F      E             ++ +I +F  G      +R+      +L+  
Sbjct: 62  NILHLHESF------ES----------MEELVMIFEFISG--LDIFERINT-SAFELNER 102

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL--GDVGIPHLLLGIPLPSS 205
            +  Y   + + +  LHS  I   +++P N I      + +   + G    L     P  
Sbjct: 103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL----KPGD 158

Query: 206 DLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 261
           +       P Y A     PEV     +S  TD W  +   +   +L+G+ P    +  +I
Sbjct: 159 NFRLLFTAPEYYA-----PEVHQHDVVSTATDMW--SLGTLVYVLLSGINPFLAETNQQI 211

Query: 262 YDAVVR 267
            + ++ 
Sbjct: 212 IENIMN 217

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 75.4 bits (185), Expect = 2e-14
 Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 37/252 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           +G+G FG+V L+      +  DE +  AVKIL     +++D +       RVL       
Sbjct: 349 LGKGSFGKVMLSER----KGTDELY--AVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL     +     Q       ++  +M++  G  GD M  + + G+    +   YA ++A
Sbjct: 403 FL----TQLHSCFQ----TMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIA 452

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
            G+  L SKGI+  +LK  N +L+      + D G    +    +      +   GTP+Y
Sbjct: 453 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG----MCKENIWDGVTTKTFCGTPDY 508

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE        P     D W F   + EML G  P  G   DE++ +++        P 
Sbjct: 509 IAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPK 563

Query: 277 GLPPAVENVLLG 288
            +      +  G
Sbjct: 564 SMSKEAVAICKG 575

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 74.7 bits (184), Expect = 3e-14
 Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 39/243 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH------PVKEDRMRVLLERLND 97
               ++G G +GEV L     +        E A+K++           D  + + +   +
Sbjct: 39  FKVRKLGSGAYGEVLLCKE-KNGHS-----EKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92

Query: 98  LF-----LKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNV 149
           ++     LK      I  L  +        ++ +FYEG  G   +++  +   K    + 
Sbjct: 93  IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEG--GELFEQI--INRHKFDECDA 148

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSD 206
                 +  GI  LH   I+  ++KP N +L N+     +   D G+             
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS----KDYK 204

Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDA 264
           L  RLGT  Y+APE     ++   + + D W  +C +I   +L G  P  G++  +I   
Sbjct: 205 LRDRLGTAYYIAPEV----LKKKYNEKCDVW--SCGVIMYILLCGYPPFGGQNDQDIIKK 258

Query: 265 VVR 267
           V +
Sbjct: 259 VEK 261

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 74.8 bits (184), Expect = 3e-14
 Identities = 62/301 (20%), Positives = 108/301 (35%), Gaps = 45/301 (14%)

Query: 15  YEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHE 74
           +  + DS +    +         +  +  +    +G+G FGEV             + + 
Sbjct: 158 FADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV----RATGKMY- 212

Query: 75  VAVKIL---HPVKEDRM------RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIM 125
            A K L      K          + +LE++N  F+    V      +        +C+++
Sbjct: 213 -ACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV----VSLAYAYE----TKDALCLVL 263

Query: 126 KFYEGSVGDRMAQL-KGGKLSLSN---VFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
               G  GD    +   G+        VF YA ++  G+  LH + I+  +LKP N +L+
Sbjct: 264 TLMNG--GDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHRERIVYRDLKPENILLD 320

Query: 182 EADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
           +     + D+G     L + +P     + R+GT  YMAPE  + E     +F  D W   
Sbjct: 321 DHGHIRISDLG-----LAVHVPEGQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALG 372

Query: 241 CSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
           C + EM+ G  P   R      +E+   V              P   ++       D   
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP--EEYSERFSPQARSLCSQLLCKDPAE 430

Query: 297 R 297
           R
Sbjct: 431 R 431

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 73.4 bits (181), Expect = 4e-14
 Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 37/261 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           +G+G FG+V LA      ++  + +  AVK+L     +++D +       R+L    N  
Sbjct: 31  LGKGSFGKVMLARV----KETGDLY--AVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL     +  C  Q       ++  +M+F  G  GD M  + K  +   +    YA ++ 
Sbjct: 85  FL----TQLFCCFQ----TPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEII 134

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
             ++ LH KGI+  +LK  N +L+      L D G    +    + +        GTP+Y
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG----MCKEGICNGVTTATFCGTPDY 190

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE  Q           D W     + EML G  P    + D++++A++  +     P+
Sbjct: 191 IAPEILQ---EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--VVYPT 245

Query: 277 GLPPAVENVLLGCFEYDLRSR 297
            L      +L      +   R
Sbjct: 246 WLHEDATGILKSFMTKNPTMR 266

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 73.1 bits (180), Expect = 4e-14
 Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 34/232 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVLLERLNDLFLKCQGV 105
           +GRG F  V       + +      E A K L      ++ R  +L E    +    +  
Sbjct: 37  LGRGKFAVVRQCISKSTGQ------EYAAKFLKKRRRGQDCRAEILHEI--AVLELAKSC 88

Query: 106 EGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
             +  L  +     +I +I+++  G  G             +S ++V R    + +G+  
Sbjct: 89  PRVINLHEVYENTSEIILILEYAAG--GEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146

Query: 163 LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           LH   I+ L+LKP N +L +      +   D G+   +      + +L   +GTP Y+A 
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG----HACELREIMGTPEYLA- 201

Query: 220 EQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAVVR 267
               PE+    PI+  TD W     II   +LT   P  G    E Y  + +
Sbjct: 202 ----PEILNYDPITTATDMW--NIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 73.0 bits (180), Expect = 4e-14
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 37/261 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           +G+G FG+V L+      +  DE +  AVKIL     +++D +       RVL       
Sbjct: 28  LGKGSFGKVMLSER----KGTDELY--AVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL     +     Q       ++  +M++  G  GD M  + + G+    +   YA ++A
Sbjct: 82  FL----TQLHSCFQ----TMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIA 131

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
            G+  L SKGI+  +LK  N +L+      + D G    +    +      +   GTP+Y
Sbjct: 132 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG----MCKENIWDGVTTKTFCGTPDY 187

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE        P     D W F   + EML G  P  G   DE++ +++        P 
Sbjct: 188 IAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPK 242

Query: 277 GLPPAVENVLLGCFEYDLRSR 297
            +      +  G        R
Sbjct: 243 SMSKEAVAICKGLMTKHPGKR 263

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 74.0 bits (182), Expect = 4e-14
 Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 35/236 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH----PVKEDRMRVLLERLNDLF 99
           K +  +G+G FGEV L      T       E AVK++       K D+  +L E      
Sbjct: 29  KGQRVLGKGSFGEVILCKD-KITG-----QECAVKVISKRQVKQKTDKESLLREVQL--- 79

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAIDL 156
           LK      I  L       G   ++ + Y G  G   D +  +   + S  +  R    +
Sbjct: 80  LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG--GELFDEI--ISRKRFSEVDAARIIRQV 135

Query: 157 AQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGT 213
             GI  +H   I+  +LKP N +L +++  A +   D G+          S  +  ++GT
Sbjct: 136 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE----ASKKMKDKIGT 191

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVR 267
             Y+APE     + G    + D W  +  +I   +L+G  P  G +  +I   V +
Sbjct: 192 AYYIAPEV----LHGTYDEKCDVW--STGVILYILLSGCPPFNGANEYDILKKVEK 241

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 74.0 bits (182), Expect = 4e-14
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 34/235 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVLLERLNDLFL 100
           +   ++G G +GEV L      T       E A+KI+           ++L E      L
Sbjct: 40  QRVKKLGSGAYGEVLLCRD-KVTHV-----ERAIKIIRKTSVSTSSNSKLLEEVAV---L 90

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAIDLA 157
           K      I  L           ++M+ Y+G  G   D +  +   K +  +       + 
Sbjct: 91  KLLDHPNIMKLYDFFEDKRNYYLVMECYKG--GELFDEI--IHRMKFNEVDAAVIIKQVL 146

Query: 158 QGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGTP 214
            G+  LH   I+  +LKP N +L ++   A++   D G+  +          +  RLGT 
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE----NQKKMKERLGTA 202

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVR 267
            Y+APE     +R     + D W  +  +I   +L G  P  G++  EI   V +
Sbjct: 203 YYIAPEV----LRKKYDEKCDVW--SIGVILFILLAGYPPFGGQTDQEILRKVEK 251

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 73.2 bits (180), Expect = 5e-14
 Identities = 56/247 (22%), Positives = 91/247 (36%), Gaps = 59/247 (23%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLE--------- 93
            +   +G G FG V       +T           K ++ P   D+  V  E         
Sbjct: 54  DILEELGSGAFGVVHRCVE-KATG-----RVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107

Query: 94  ----RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSL 146
                L+D F      E             ++ +I++F  G  G   DR+A  +  K+S 
Sbjct: 108 PKLINLHDAF------ED----------KYEMVLILEFLSG--GELFDRIAA-EDYKMSE 148

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHLLLGIPLPS 204
           + V  Y     +G+  +H   I+ L++KP N +    +A    + D G+   L     P 
Sbjct: 149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPD 204

Query: 205 SDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDE 260
             +     T  + A     PE+  R P+ F TD W  A  ++   +L+G+ P  G    E
Sbjct: 205 EIVKVTTATAEFAA-----PEIVDREPVGFYTDMW--AIGVLGYVLLSGLSPFAGEDDLE 257

Query: 261 IYDAVVR 267
               V R
Sbjct: 258 TLQNVKR 264

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 72.2 bits (178), Expect = 6e-14
 Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 32/259 (12%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVLLER-----LNDLFL 100
           +G+G FG+V+L      ++    Y   A+K+L        DR+R  +ER     +N  F+
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLY---AMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQG 159
               V+     Q      GK+ +I+ F  G  GD   +L K    +  +V  Y  +LA  
Sbjct: 89  ----VKLHYAFQ----TEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALA 138

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMA 218
           +  LHS GI+  +LKP N +L+E     L D G    L    +          GT  YMA
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG----LSKESIDHEKKAYSFCGTVEYMA 194

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
           PE      R   +   D W F   + EMLTG  P  G+   E    +++ +    +P  L
Sbjct: 195 PEVVN---RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFL 249

Query: 279 PPAVENVLLGCFEYDLRSR 297
            P  +++L   F+ +  +R
Sbjct: 250 SPEAQSLLRMLFKRNPANR 268

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 73.3 bits (180), Expect = 7e-14
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 26/280 (9%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW I   +L+L  ++G+G FGEVW+ T        +    VA+K L P        L E 
Sbjct: 178 AWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEAFLQEA 230

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
                L+    E +  L  + V    I I+ ++   GS+ D +    G  L L  +   A
Sbjct: 231 QVMKKLRH---EKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD---LPRR 210
             +A G+  +     +  +L+  N ++ E     + D G+  L+      +      P +
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
                + APE       G  + ++D W F   + E+ T G  P  G    E+ D V R  
Sbjct: 347 -----WTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +P  P   P ++ +++  C+  +   RP    +    + 
Sbjct: 399 RMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 72.3 bits (178), Expect = 9e-14
 Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 37/261 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           IG+G FG+V LA H    +  + ++  AVK+L     +K+           VLL+ +   
Sbjct: 46  IGKGSFGKVLLARH----KAEEVFY--AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL    V      Q       K+  ++ +  G  G+    L +           YA ++A
Sbjct: 100 FL----VGLHFSFQ----TADKLYFVLDYING--GELFYHLQRERCFLEPRARFYAAEIA 149

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
             +  LHS  I+  +LKP N +L+     VL D G    L    +  +       GTP Y
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG----LCKENIEHNSTTSTFCGTPEY 205

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +APE      + P     D W     + EML G+ P   R+  E+YD ++ +     +  
Sbjct: 206 LAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKP 260

Query: 277 GLPPAVENVLLGCFEYDLRSR 297
            +  +  ++L G  + D   R
Sbjct: 261 NITNSARHLLEGLLQKDRTKR 281

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 72.9 bits (179), Expect = 1e-13
 Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 55/245 (22%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK-ILHPVKEDRMRVLLE--------- 93
            +   +G G FG V   T   +          A K ++ P + D+  V  E         
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGN------NFAAKFVMTPHESDKETVRKEIQTMSVLRH 213

Query: 94  ----RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSL 146
                L+D F      E           + ++ +I +F  G  G   +++A  +  K+S 
Sbjct: 214 PTLVNLHDAF------ED----------DNEMVMIYEFMSG--GELFEKVAD-EHNKMSE 254

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHLLLGIPLPS 204
                Y   + +G+  +H    + L+LKP N +     ++   L D G+   L     P 
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPK 310

Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIY 262
             +    GT  + APE  + +   P+ + TD W  +  ++   +L+G+ P  G + DE  
Sbjct: 311 QSVKVTTGTAEFAAPEVAEGK---PVGYYTDMW--SVGVLSYILLSGLSPFGGENDDETL 365

Query: 263 DAVVR 267
             V  
Sbjct: 366 RNVKS 370

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 73.2 bits (179), Expect = 1e-13
 Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 51/256 (19%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +++ R+G G FG V    H  + E      +VA+K        + R              
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTGE------QVAIKQCRQELSPKNRERWCL--------- 61

Query: 104 GVEGICWLQGIS-----------------VINGKICIIMKFYE-GSVGDRMAQL-KGGKL 144
             E I  ++ ++                   N    + M++ E G +   + Q      L
Sbjct: 62  --E-IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL 118

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV---LGDVGIPHLLLGIP 201
               +     D++  +  LH   I+  +LKP N +L    + +   + D+G    L    
Sbjct: 119 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--- 175

Query: 202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVD 259
                    +GT  Y+APE  + +         D W  +   +  E +TG +P       
Sbjct: 176 -QGELCTEFVGTLQYLAPELLEQKKYTV---TVDYW--SFGTLAFECITGFRPFLPNWQP 229

Query: 260 EIYDAVVRRQEIPPIP 275
             +   VR +    I 
Sbjct: 230 VQWHGKVREKSNEHIV 245

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 72.6 bits (178), Expect = 1e-13
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 26/280 (9%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW I   +L+L  ++G+G FGEVW+ T        +    VA+K L P        L E 
Sbjct: 261 AWEIPRESLRLEVKLGQGCFGEVWMGT-------WNGTTRVAIKTLKPGTMSPEAFLQEA 313

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
                L+    E +  L  + V    I I+ ++   GS+ D +    G  L L  +   A
Sbjct: 314 QVMKKLRH---EKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD---LPRR 210
             +A G+  +     +  +L+  N ++ E     + D G+  L+      +      P +
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
                + APE       G  + ++D W F   + E+ T G  P  G    E+ D V R  
Sbjct: 430 -----WTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +P  P   P ++ +++  C+  +   RP    +    + 
Sbjct: 482 RMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 38/267 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM--------RVLLERLND 97
           +G G +G+V+L       +    Y   A+K+L     V++ +         +VL      
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLY---AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS 118

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDL 156
            FL    V      Q       K+ +I+ +  G  G+    L +  + +   V  Y  ++
Sbjct: 119 PFL----VTLHYAFQ----TETKLHLILDYING--GELFTHLSQRERFTEHEVQIYVGEI 168

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL--LGIPLPSSDLPRRLGTP 214
              +  LH  GI+  ++K  N +L+     VL D G    L    +   +       GT 
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG----LSKEFVADETERAYDFCGTI 224

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP----RCGRSVDEIYDAVVRRQE 270
            YMAP+  +    G      D W     + E+LTG  P        S  EI   +++ + 
Sbjct: 225 EYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE- 282

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSR 297
            PP P  +    ++++      D + R
Sbjct: 283 -PPYPQEMSALAKDLIQRLLMKDPKKR 308

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 56/292 (19%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RMRVLLE-----R 94
           +L   +G G   EV LA       D  ++ +VAVK+L   +  D    +R   E      
Sbjct: 15  ELGEILGFGGMSEVHLAR------DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68

Query: 95  LN--------DLFLKCQGVEGICWLQGISVINGKIC-IIMKFYEG-SVGDRMAQLKGGKL 144
           LN        D      G              G +  I+M++ +G ++ D +     G +
Sbjct: 69  LNHPAIVAVYD-----TGEA--------ETPAGPLPYIVMEYVDGVTLRDIVHT--EGPM 113

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 204
           +         D  Q +   H  GI+  ++KP N +++  +   + D GI   +       
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173

Query: 205 SDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 263
           +     +GT  Y++PEQ     RG  +   +D +   C + E+LTG  P  G S   +  
Sbjct: 174 TQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-- 227

Query: 264 AVVRRQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP-----LMTDILRV 306
           A    +E P  PS    GL   ++ V+L     +  +R      +  D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 36/260 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           +G+G FG+V L       +    Y+  A+KIL     + +D +        +L+     F
Sbjct: 13  LGKGTFGKVILVRE----KATGRYY--AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
           L           Q     + ++C +M++  G  G+    L +    +      Y  ++  
Sbjct: 67  L----TALKYAFQ----THDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIVS 116

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYM 217
            +  LHS+ ++  ++K  N +L++     + D G    L    +      +   GTP Y+
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG----LCKEGISDGATMKTFCGTPEYL 172

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE  +           D WG    + EM+ G  P   +  + +++ ++  +     P  
Sbjct: 173 APEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRT 227

Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L P  +++L G  + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 46/270 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           IGRG + +V L       +  D  +  A++++       ++ +        V  +  N  
Sbjct: 60  IGRGSYAKVLLVRL----KKTDRIY--AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL    V      Q       ++  ++++  G  GD M  + +  KL   +   Y+ +++
Sbjct: 114 FL----VGLHSCFQ----TESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEIS 163

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
             +  LH +GI+  +LK  N +L+      L D G    +    L   D      GTPNY
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNY 219

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---------RCGRSVDEIYDAVVR 267
           +APE  +        F  D W     + EM+ G  P             + D ++  ++ 
Sbjct: 220 IAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           +Q    IP  L     +VL      D + R
Sbjct: 277 KQ--IRIPRSLSVKAASVLKSFLNKDPKER 304

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 58/300 (19%), Positives = 111/300 (37%), Gaps = 35/300 (11%)

Query: 9   QPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED 68
              DF      D+        +       +  +  +    +G+G FG+V L       + 
Sbjct: 116 AEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKE----KA 171

Query: 69  CDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLFLKCQGVEGICWLQGISVING 119
              Y+  A+KIL     V +D +        +L+     FL           Q     + 
Sbjct: 172 TGRYY--AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL----TALKYSFQ----THD 221

Query: 120 KICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFN 177
           ++C +M++  G  G+    L +    S      Y  ++   +  LHS K ++  +LK  N
Sbjct: 222 RLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 279

Query: 178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
            +L++     + D G+    +             GTP Y+APE  +           D W
Sbjct: 280 LMLDKDGHIKITDFGLCKEGIKDGATMKTF---CGTPEYLAPEVLE---DNDYGRAVDWW 333

Query: 238 GFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           G    + EM+ G  P   +  +++++ ++  +     P  L P  +++L G  + D + R
Sbjct: 334 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQR 391

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 59/242 (24%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLE-------------R 94
           +G G FG+V       +T       ++A KI+     +D+  V  E             +
Sbjct: 97  LGGGRFGQVHKCEE-TATG-----LKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFR 151
           L D F      E              I ++M++ +G  G   DR+   +   L+  +   
Sbjct: 151 LYDAF------ES----------KNDIVLVMEYVDG--GELFDRIID-ESYNLTELDTIL 191

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL--GDVGIPHLLLGIPLPSSDLPR 209
           +   + +GI  +H   IL L+LKP N +    D   +   D G+         P   L  
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY----KPREKLKV 247

Query: 210 RLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAV 265
             GTP ++A     PEV     +SF TD W  +  +I   +L+G+ P  G +  E  + +
Sbjct: 248 NFGTPEFLA-----PEVVNYDFVSFPTDMW--SVGVIAYMLLSGLSPFLGDNDAETLNNI 300

Query: 266 VR 267
           + 
Sbjct: 301 LA 302

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 70.3 bits (173), Expect = 3e-13
 Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 46/270 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           IGRG + +V L       +  D  +  A+K++       ++ +        V  +  N  
Sbjct: 17  IGRGSYAKVLLVRL----KKTDRIY--AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           FL    V      Q       ++  ++++  G  GD M  + +  KL   +   Y+ +++
Sbjct: 71  FL----VGLHSCFQ----TESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEIS 120

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNY 216
             +  LH +GI+  +LK  N +L+      L D G    +    L   D      GTPNY
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG----MCKEGLRPGDTTSTFCGTPNY 176

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---------RCGRSVDEIYDAVVR 267
           +APE  +        F  D W     + EM+ G  P             + D ++  ++ 
Sbjct: 177 IAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           +Q    IP  L     +VL      D + R
Sbjct: 234 KQ--IRIPRSLSVKAASVLKSFLNKDPKER 261

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 71.3 bits (175), Expect = 3e-13
 Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 38/237 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
            +   +G+G FGEV        T+      E AVK++     ++     +  + +     
Sbjct: 25  NIVCMLGKGSFGEVLKCKD-RITQQ-----EYAVKVI-----NKASAKNKDTSTILREVE 73

Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAID 155
            LK      I  L  I   +    I+ + Y G  G   D +  +K  + S  +  R    
Sbjct: 74  LLKKLDHPNIMKLFEILEDSSSFYIVGELYTG--GELFDEI--IKRKRFSEHDAARIIKQ 129

Query: 156 LAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLG 212
           +  GI  +H   I+  +LKP N +L ++     +   D G+          ++ +  R+G
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ----QNTKMKDRIG 185

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVR 267
           T  Y+APE     +RG    + D W  +  +I   +L+G  P  G++  +I   V  
Sbjct: 186 TAYYIAPEV----LRGTYDEKCDVW--SAGVILYILLSGTPPFYGKNEYDILKRVET 236

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.9 bits (171), Expect = 5e-13
 Identities = 63/287 (21%), Positives = 109/287 (37%), Gaps = 31/287 (10%)

Query: 26  TAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVK 84
            A  T       +K    +    +G G  G V+  +H  S         +A K++H  +K
Sbjct: 18  EAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIK 71

Query: 85  EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK 143
                 ++  L  L  +C     I    G    +G+I I M+  + GS+   +   K G+
Sbjct: 72  PAIRNQIIRELQVLH-ECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGR 127

Query: 144 LSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
           +    + + +I + +G+  L  K  I+  ++KP N ++N      L D G+         
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--------- 178

Query: 203 PSSDLPRRL-----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 257
            S  L   +     GT +YM+PE+ Q       S ++D W    S++EM  G  P     
Sbjct: 179 -SGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
             E+      + E     +   P      L  F  D R    + ++L
Sbjct: 235 AKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELL 281

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 68.0 bits (167), Expect = 8e-13
 Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 36/267 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV---------LLERLNDLF 99
           +G+G FG V+LA    S         +A+K+L   + ++  V         +   L    
Sbjct: 17  LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
                   I  L G      ++ +I+++     G    +L K  K        Y  +LA 
Sbjct: 71  --------ILRLYGYFHDATRVYLILEYAPL--GTVYRELQKLSKFDEQRTATYITELAN 120

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
            +   HSK ++  ++KP N +L  A    + D G       +  PSS      GT +Y+ 
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTDLCGTLDYLP 175

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
           PE  +  +      + D W       E L G  P    +  E Y  + R +     P  +
Sbjct: 176 PEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--FTFPDFV 230

Query: 279 PPAVENVLLGCFEYDLRSRPLMTDILR 305
                +++    +++   RP++ ++L 
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLE 257

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 68.7 bits (169), Expect = 1e-12
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 32/260 (12%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM-------RVLLERLNDL 98
           +G+G +G+V+             +   A+K+L     V+  +        R +LE +   
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIF---AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
           F+    V+ I   Q      GK+ +I+++  G  G+   QL + G         Y  +++
Sbjct: 82  FI----VDLIYAFQ----TGGKLYLILEYLSG--GELFMQLEREGIFMEDTACFYLAEIS 131

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             +  LH KGI+  +LKP N +LN      L D G+    +     +       GT  YM
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF---CGTIEYM 188

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE      R   +   D W     + +MLTG  P  G +  +  D +++ +    +P  
Sbjct: 189 APEILM---RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLPPY 243

Query: 278 LPPAVENVLLGCFEYDLRSR 297
           L     ++L    + +  SR
Sbjct: 244 LTQEARDLLKKLLKRNAASR 263

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 69.3 bits (170), Expect = 1e-12
 Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 30/252 (11%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           IGRG FGEV L  H    +   + +  A+K+L     +K          R ++   N  +
Sbjct: 77  IGRGAFGEVQLVRH----KSTRKVY--AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
           +    V+     Q     +  + ++M++  G  GD +  +    +       Y  ++   
Sbjct: 131 V----VQLFYAFQD----DRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLA 180

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  +HS G +  ++KP N +L+++    L D G    +    +   D    +GTP+Y++P
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISP 238

Query: 220 EQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG- 277
           E  + +   G    E D W     + EML G  P    S+   Y  ++  +     P   
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 298

Query: 278 -LPPAVENVLLG 288
            +    +N++  
Sbjct: 299 DISKEAKNLICA 310

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 69.8 bits (171), Expect = 1e-12
 Identities = 53/268 (19%), Positives = 91/268 (33%), Gaps = 44/268 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           +GRG FGEV+        +   + +  A K L      K          + +L +++  F
Sbjct: 193 LGRGGFGEVFACQM----KATGKLY--ACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-----KGGKLSLSNVFRYAI 154
           +    V      +        +C++M    G  GD    +                 Y  
Sbjct: 247 I----VSLAYAFE----TKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGFQEPRAIFYTA 296

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGT 213
            +  G+  LH + I+  +LKP N +L++     + D+G    L           +   GT
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKGYAGT 352

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQ 269
           P +MAPE    E      F  D +    ++ EM+    P   R       E+   V+ + 
Sbjct: 353 PGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSR 297
                P    PA ++      + D   R
Sbjct: 410 --VTYPDKFSPASKDFCEALLQKDPEKR 435

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 36/270 (13%), Positives = 65/270 (24%), Gaps = 68/270 (25%)

Query: 45  LRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPV----KEDRMRVLLE----- 93
           L    G  P  + W A         D     +VA+  + P      +     L       
Sbjct: 35  LLIFHGGVPPLQFWQAL--------DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLS 86

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
           R++          G+  +  +        ++ ++  G     + ++     S     R  
Sbjct: 87  RIDK--------PGVARVLDVVHTRAGGLVVAEWIRGG---SLQEVADTSPSPVGAIRAM 135

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             LA      H  G+ +    P    ++     VL                         
Sbjct: 136 QSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA--------------------- 174

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIP 272
              M             + + D  G   S+  +L    P     V        R     P
Sbjct: 175 --TMPDA----------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

Query: 273 PIPS----GLPPAVENVLLGCFEYDLRSRP 298
             P+     +P  +  V     + D   R 
Sbjct: 223 IEPADIDRDIPFQISAVAARSVQGDGGIRS 252

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 28/238 (11%)

Query: 25  RTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-V 83
           +T   T        + + L+    +G G  G+VW      +         +AVK +    
Sbjct: 9   QTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGH------VIAVKQMRRSG 62

Query: 84  KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
            ++  + +L  L+ +         I    G  + N  + I M+       +++ +   G 
Sbjct: 63  NKEENKRILMDLDVVLKSHDC-PYIVQCFGTFITNTDVFIAMELMGTCA-EKLKKRMQGP 120

Query: 144 LSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
           +    + +  + + + +  L  K G++  ++KP N +L+E  +  L D GI         
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI--------- 171

Query: 203 PSSDLPRRL------GTPNYMAPEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQP 252
            S  L          G   YMAPE+  P            D W    S++E+ TG  P
Sbjct: 172 -SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 42/265 (15%), Positives = 83/265 (31%), Gaps = 44/265 (16%)

Query: 44  KLRHRIGRGPFGEVWLATH---------------YLSTEDCDEYHEVA--VKIL----HP 82
            L+  IG+G +G V +A                  +   +  +   +   V+++    HP
Sbjct: 29  HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88

Query: 83  -------VKEDRMRVLL--ERLN--DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGS 131
                  V ED   + L  E  +   L  K          +    +              
Sbjct: 89  NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148

Query: 132 VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ----LHSKGILVLNLKPFNFILNEADRAV 187
             +         L      +   ++ + I      LH++GI   ++KP NF+ +      
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFE 208

Query: 188 L--GDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 244
           +   D G+              +  + GTP ++APE            + D+W  +  ++
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE-SYGPKCDAW--SAGVL 265

Query: 245 --EMLTGVQPRCGRSVDEIYDAVVR 267
              +L G  P  G +  +    V+ 
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLN 290

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 47/278 (16%), Positives = 85/278 (30%), Gaps = 55/278 (19%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L   +G+G    V+   H  + +        A+K+ + +   R   +  R         
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGD------LFAIKVFNNISFLRPVDVQMR--------- 56

Query: 104 GVEGICWLQGIS---------VI----NGKICIIMKFYE-GSVGDRMAQL-KGGKLSLSN 148
             E    L+ ++         +          +IM+F   GS+   + +      L  S 
Sbjct: 57  --E-FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE 113

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV----LGDVGIPHLLLGIPLPS 204
                 D+  G+  L   GI+  N+KP N +    +       L D G    L       
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE----DD 169

Query: 205 SDLPRRLGTPNYMAPE-----QWQPEVRGPISFETDSWGFACSIIEMLTGVQP----RCG 255
                  GT  Y+ P+       + + +       D W    +     TG  P       
Sbjct: 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229

Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 293
           R   E+   ++  +     PSG    V+    G  ++ 
Sbjct: 230 RRNKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 50/272 (18%), Positives = 91/272 (33%), Gaps = 44/272 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FG VW A      +      EV VK +      + +VL +   +     +    I
Sbjct: 32  LGSGAFGFVWTAVDKEKNK------EVVVKFI-----KKEKVLEDCWIEDPKLGKVTLEI 80

Query: 109 CWLQGIS---------VI--NGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDL 156
             L  +          +    G   ++M+ + GS  D  A + +  +L           L
Sbjct: 81  AILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFRQL 139

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
              +  L  K I+  ++K  N ++ E     L D G                   GT  Y
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG----SAAYLERGKLFYTFCGTIEY 195

Query: 217 MAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
            APE       RGP   E + W  +  +    ++    P C   ++E  +A +       
Sbjct: 196 CAPEVLMGNPYRGP---ELEMW--SLGVTLYTLVFEENPFCE--LEETVEAAIH------ 242

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            P  +   + +++ G  +     R  +  ++ 
Sbjct: 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 65/308 (21%), Positives = 107/308 (34%), Gaps = 71/308 (23%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    + L   +G G FGEV+         +     +VAVK L    E       +   D
Sbjct: 27  VPRKNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTL---PEVCSE---QDELD 79

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGD--------RMAQL 139
            FL     E           I    G+S+ +    I+M+   G  GD        R    
Sbjct: 80  -FLM----EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG--GDLKSFLRETRPRPS 132

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVGIPHL 196
           +   L++ ++   A D+A G   L             +FI   +  A R  L     P  
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEEN----------HFIHRDI--AARNCLLTCPGPGR 180

Query: 197 LLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWGFAC 241
           +  I     D  + R +   +Y             M PE +   + G  + +TD+W F  
Sbjct: 181 VAKI----GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF---MEGIFTSKTDTWSFGV 233

Query: 242 SIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 300
            + E+ + G  P   +S  E+ + V     + P P   P  V  ++  C+++    RP  
Sbjct: 234 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 292

Query: 301 TDILRVFK 308
             IL   +
Sbjct: 293 AIILERIE 300

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 42/264 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           +G G F  V LA          EY   A+KIL   H +KE+++      R ++ RL+  F
Sbjct: 38  LGEGSFSTVVLARE---LATSREY---AIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
                V+     Q     + K+   + + +   G+ +  + K G    +    Y  ++  
Sbjct: 92  F----VKLYFTFQD----DEKLYFGLSYAKN--GELLKYIRKIGSFDETCTRFYTAEIVS 141

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPN 215
            +  LH KGI+  +LKP N +LNE     + D G       +  P S   R    +GT  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANSFVGTAQ 197

Query: 216 YMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           Y++PE    +   +      +D W   C I +++ G+ P    +   I+  +++ +    
Sbjct: 198 YVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--YD 250

Query: 274 IPSGLPPAVENVLLGCFEYDLRSR 297
            P    P   +++      D   R
Sbjct: 251 FPEKFFPKARDLVEKLLVLDATKR 274

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 65.7 bits (161), Expect = 6e-12
 Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 46/273 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLKCQGVE 106
           +G+G F + +  +   +          A KI+    + +   R  +             E
Sbjct: 23  LGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSM-----------E 65

Query: 107 ----------GICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAID 155
                      +    G    N  + ++++     S+ +     +   L+      Y   
Sbjct: 66  ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQ 123

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTP 214
           +  G   LH   ++  +LK  N  LNE     +GD G    L        +  + L GTP
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG----LATKVEYDGERKKVLCGTP 179

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           NY+APE      +   SFE D W  +   I   +L G  P     + E Y  + + +   
Sbjct: 180 NYIAPEVLS---KKGHSFEVDVW--SIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--Y 232

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            IP  + P   +++    + D  +RP + ++L 
Sbjct: 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 67.1 bits (164), Expect = 6e-12
 Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 40/286 (13%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W ++ + + ++H++G G +GEV+    +           VAVK L   KED M V    
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGV-WKKYS-----LTVAVKTL---KEDTMEV---- 260

Query: 95  LNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLS 147
             + FLK   V        +  L G+        II +F   G++ D + +    ++S  
Sbjct: 261 --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG---IPLPS 204
            +   A  ++  +  L  K  +  NL   N ++ E     + D G+  L+ G        
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378

Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
           +  P +       APE          S ++D W F   + E+ T G+ P  G  + ++Y+
Sbjct: 379 AKFPIKW-----TAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430

Query: 264 AVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
            + +  R E P    G P  V  ++  C++++   RP   +I + F
Sbjct: 431 LLEKDYRMERPE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 66.1 bits (162), Expect = 6e-12
 Identities = 54/295 (18%), Positives = 103/295 (34%), Gaps = 58/295 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K +  K    +G G FG V+        E       VA+K L   +E        + N 
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGL--WIPEGEKVKIPVAIKEL---REATS----PKANK 62

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSL 146
             L     E           +C L GI  +   + +I +    G + D + +     +  
Sbjct: 63  EILD----EAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYV-REHKDNIGS 116

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             +  + + +A+G+  L  + ++  +L   N ++       + D G              
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-------------- 162

Query: 207 LPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
           L + LG                 MA E          + ++D W +  ++ E++T G +P
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
             G    EI   + + + +P  P      V  ++  C+  D  SRP   +++  F
Sbjct: 220 YDGIPASEISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELIIEF 273

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 66.4 bits (162), Expect = 7e-12
 Identities = 46/278 (16%), Positives = 84/278 (30%), Gaps = 55/278 (19%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L   +G+G    V+   H  + +        A+K+ + +   R   +  R         
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGD------LFAIKVFNNISFLRPVDVQMR--------- 56

Query: 104 GVEGICWLQGIS---------VI----NGKICIIMKFYE-GSVGDRMAQL-KGGKLSLSN 148
             E    L+ ++         +          +IM+F   GS+   + +      L  S 
Sbjct: 57  --E-FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE 113

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV----LGDVGIPHLLLGIPLPS 204
                 D+  G+  L   GI+  N+KP N +    +       L D G            
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG----AARELEDD 169

Query: 205 SDLPRRLGTPNYMAPE-----QWQPEVRGPISFETDSWGFACSIIEMLTGVQP----RCG 255
                  GT  Y+ P+       + + +       D W    +     TG  P       
Sbjct: 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229

Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 293
           R   E+   ++  +     PSG    V+    G  ++ 
Sbjct: 230 RRNKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 61/306 (19%), Positives = 105/306 (34%), Gaps = 67/306 (21%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    + L   +G G FGEV+         +     +VAVK L    E       +   D
Sbjct: 68  VPRKNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTL---PEVCSE---QDELD 120

Query: 98  LF--------LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD--------RMAQLKG 141
                        Q +  +    G+S+ +    I+++   G  GD        R    + 
Sbjct: 121 FLMEALIISKFNHQNI--VR-CIGVSLQSLPRFILLELMAG--GDLKSFLRETRPRPSQP 175

Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVGIPHLLL 198
             L++ ++   A D+A G   L             +FI   +  A R  L     P  + 
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEEN----------HFIHRDI--AARNCLLTCPGPGRVA 223

Query: 199 GIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWGFACSI 243
            I     D  + R +    Y             M PE +   + G  + +TD+W F   +
Sbjct: 224 KI----GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF---MEGIFTSKTDTWSFGVLL 276

Query: 244 IEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 302
            E+ + G  P   +S  E+ + V     + P P   P  V  ++  C+++    RP    
Sbjct: 277 WEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAI 335

Query: 303 ILRVFK 308
           IL   +
Sbjct: 336 ILERIE 341

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 51/255 (20%), Positives = 83/255 (32%), Gaps = 68/255 (26%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-------PVKEDRMRVLLE--- 93
            +   +G G F  V       ST       E A K +             R  +  E   
Sbjct: 15  DIGEELGSGQFAIVKKCRE-KSTG-----LEYAAKFIKKRQSRASRRGVSREEIEREVSI 68

Query: 94  ----------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLK 140
                      L+D++      E              + +I++   G  G   D +AQ  
Sbjct: 69  LRQVLHHNVITLHDVY------EN----------RTDVVLILELVSG--GELFDFLAQ-- 108

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHL 196
              LS      +   +  G+  LH+K I   +LKP N +L         +   D G+ H 
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168

Query: 197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQP 252
           +        +     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P
Sbjct: 169 I----EDGVEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASP 217

Query: 253 RCGRSVDEIYDAVVR 267
             G +  E    +  
Sbjct: 218 FLGDTKQETLANITS 232

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 66/327 (20%), Positives = 125/327 (38%), Gaps = 83/327 (25%)

Query: 29  ATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           A  +  +   IK   + L+  +G G FG+V+LA    +     +   VAVK L   K+  
Sbjct: 2   AMHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAE-CYNLSPTKDKMLVAVKAL---KDPT 57

Query: 88  MRVLLERLNDL----FLKCQGVEGICWLQGISVINGKICIIMKF---------------Y 128
           +    +   +      L+ + +  +    G+      + ++ ++                
Sbjct: 58  LAARKDFQREAELLTNLQHEHI--VK-FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPD 114

Query: 129 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADR 185
              + D   +   G+L LS +   A  +A G++ L S+          +F+   L  A R
Sbjct: 115 AMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ----------HFVHRDL--ATR 162

Query: 186 AVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPI 230
             L  VG  +LL+ I     D  + R + + +Y             M PE          
Sbjct: 163 NCL--VG-ANLLVKI----GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE---------- 205

Query: 231 SF-------ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
           S        E+D W F   + E+ T G QP    S  E+ + + + + +   P   P  V
Sbjct: 206 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER-PRVCPKEV 264

Query: 283 ENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +V+LGC++ + + R  + +I ++  +
Sbjct: 265 YDVMLGCWQREPQQRLNIKEIYKILHA 291

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 68/280 (24%), Positives = 123/280 (43%), Gaps = 30/280 (10%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW I   +LKL  ++G G FGEVW+AT        +++ +VAVK + P        L E 
Sbjct: 182 AWEIPRESLKLEKKLGAGQFGEVWMAT-------YNKHTKVAVKTMKPGSMSVEAFLAEA 234

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
                L+    + +  L  + V    I II +F   GS+ D +   +G K  L  +  ++
Sbjct: 235 NVMKTLQH---DKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD---LPRR 210
             +A+G+  +  +  +  +L+  N +++ +    + D G+  ++      + +    P +
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350

Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR-- 267
                + APE       G  + ++D W F   ++E++T G  P  G S  E+  A+ R  
Sbjct: 351 -----WTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           R    P P   P  + N+++ C++     RP    I  V 
Sbjct: 403 RM---PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 52/272 (19%), Positives = 95/272 (34%), Gaps = 44/272 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLKCQGVE 106
           +G+G F + +  +   +          A KI+    + +   R  +             E
Sbjct: 49  LGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSM-----------E 91

Query: 107 ----------GICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAID 155
                      +    G    N  + ++++     S+ +     +   L+      Y   
Sbjct: 92  ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQ 149

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           +  G   LH   ++  +LK  N  LNE     +GD G   L   +           GTPN
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDGERKKVLCGTPN 206

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           Y+APE      +   SFE D W  +   I   +L G  P     + E Y  + + +    
Sbjct: 207 YIAPEVLS---KKGHSFEVDVW--SIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YS 259

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           IP  + P   +++    + D  +RP + ++L 
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELLN 291

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 64.1 bits (157), Expect = 1e-11
 Identities = 60/286 (20%), Positives = 103/286 (36%), Gaps = 40/286 (13%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W I PS L     IG G FG V L              +VA+K +   +E  M       
Sbjct: 3   WVIDPSELTFVQEIGSGQFGLVHLGY-------WLNKDKVAIKTI---REGAMSE----- 47

Query: 96  NDLFLKCQGV------EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLS 147
            + F++   V        +  L G+ +    IC++ +F E   G     L+   G  +  
Sbjct: 48  -EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH--GCLSDYLRTQRGLFAAE 104

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
            +    +D+ +G+  L    ++  +L   N ++ E     + D G     +   +     
Sbjct: 105 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG-----MTRFVLDDQY 159

Query: 208 PRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
               GT     P +W  PEV      S ++D W F   + E+ + G  P   RS  E+ +
Sbjct: 160 TSSTGT---KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216

Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +     +   P      V  ++  C+      RP  + +LR    
Sbjct: 217 DISTGFRLYK-PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 48/300 (16%), Positives = 89/300 (29%), Gaps = 60/300 (20%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           I+   L     +G+G F +++      +         EV +K+L    +           
Sbjct: 5   IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL---DKAHRNYSES--- 58

Query: 97  DLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKL 144
             F +                +    G+ V   +  ++ +F +   G     LK     +
Sbjct: 59  --FFE----AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKF--GSLDTYLKKNKNCI 110

Query: 145 SLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEADRAVLGDVGIP 194
           ++      A  LA  +  L              IL++  +             L D GI 
Sbjct: 111 NILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRK--TGNPPFIKLSDPGIS 168

Query: 195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-PEV---RGPISFETDSWGFACSIIEMLT-G 249
             +             L          W  PE       ++  TD W F  ++ E+ + G
Sbjct: 169 ITV-------------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG 215

Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            +P               R ++P  P      + N++  C +Y+   RP    I+R   S
Sbjct: 216 DKPLSALDSQRKLQFYEDRHQLPA-PK--AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 31/281 (11%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRVLLERLN 96
           +K   L+    +GRG +G V    H  S +       +AVK +   V     + LL  L 
Sbjct: 4   VKADDLEPIMELGRGAYGVVEKMRHVPSGQ------IMAVKRIRATVNSQEQKRLLMDL- 56

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAI 154
           D+ ++           G     G + I M+  + S+     Q+  KG  +    + + A+
Sbjct: 57  DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV 116

Query: 155 DLAQGILQLHSKG-ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-- 211
            + + +  LHSK  ++  ++KP N ++N   +  + D GI          S  L   +  
Sbjct: 117 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI----------SGYLVDDVAK 166

Query: 212 ----GTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAV 265
               G   YMAPE+  PE+     S ++D W    ++IE+     P     +  +    V
Sbjct: 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226

Query: 266 VRRQEIPPIPSGL-PPAVENVLLGCFEYDLRSRPLMTDILR 305
           V  +  P +P+        +    C + + + RP   ++++
Sbjct: 227 V-EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 59/295 (20%), Positives = 112/295 (37%), Gaps = 68/295 (23%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +L   +G G +G+V+   H  + +        A+K++  V  D    + + +N L     
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQ------LAAIKVM-DVTGDEEEEIKQEINMLKKYSH 79

Query: 104 --------GVEGICWLQG-ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS---LSNVF 150
                   G     +++     ++ ++ ++M+F   GSV D +   KG  L    ++ + 
Sbjct: 80  HRNIATYYG----AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
           R   ++ +G+  LH   ++  ++K  N +L E     L D G+   L         + RR
Sbjct: 136 R---EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTVGRR 186

Query: 211 ---LGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
              +GTP +MAPE             F++D W    + IEM  G  P C           
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC----------- 235

Query: 266 VRRQEIPP------IPSGLPPAVE---------NVLLGCFEYDLRSRPLMTDILR 305
               ++ P      IP    P ++         + +  C   +   RP    +++
Sbjct: 236 ----DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 55/272 (20%), Positives = 92/272 (33%), Gaps = 37/272 (13%)

Query: 21  SDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL 80
           S      +  S + +       LK    IGRG +G V    H  S +       +AVK +
Sbjct: 2   SIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQ------IMAVKRI 55

Query: 81  HP-VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD---RM 136
              V E   + LL  L+ +         I    G     G   I M+    S       +
Sbjct: 56  RSTVDEKEQKQLLMDLDVVMRSSD-CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYV 114

Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEADRAVLGDVGIPH 195
             +    +    + +  +   + +  L     I+  ++KP N +L+ +    L D GI  
Sbjct: 115 YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI-- 172

Query: 196 LLLGIPLPSSDLPRRL------GTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLT 248
                   S  L   +      G   YMAPE+  P          +D W    ++ E+ T
Sbjct: 173 --------SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT 224

Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
           G  P      + ++D + +      +  G PP
Sbjct: 225 GRFPYP--KWNSVFDQLTQ------VVKGDPP 248

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 52/270 (19%), Positives = 89/270 (32%), Gaps = 38/270 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL-------HPVKEDRMRVLLE-RLNDLFL 100
           +G+G FG V+               +VA+K++            D +   LE  L     
Sbjct: 39  LGKGGFGTVFAGHRLTDRL------QVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQG 159
              G  G+  L           ++++       D    + + G L       +   +   
Sbjct: 93  AGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
           I   HS+G++  ++K  N +++       L D G   LL   P    D     GT  Y  
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-----GTRVYSP 206

Query: 219 PEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           PE                 W  +  I+  +M+ G  P       EI +A +        P
Sbjct: 207 PEWISRHQYHAL---PATVW--SLGILLYDMVCGDIPFERD--QEILEAELH------FP 253

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           + + P    ++  C      SRP + +IL 
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 63.4 bits (155), Expect = 4e-11
 Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 53/291 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IG+G +G V LA +             A+K+L      + +++ +         +G    
Sbjct: 21  IGKGSYGVVKLAYNENDNT------YYAMKVL-----SKKKLIRQAGFPRRPPPRGTRPA 69

Query: 109 CWLQGIS---------------------------VI----NGKICIIMKFYEGSVGDRMA 137
                                             V+       + ++ +      G  M 
Sbjct: 70  PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVME 127

Query: 138 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL 197
                 LS      Y  DL +GI  LH + I+  ++KP N ++ E     + D G+ +  
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187

Query: 198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCG 255
            G     + L   +GTP +MAPE      +       D W  A  +     + G  P   
Sbjct: 188 KG---SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVW--AMGVTLYCFVFGQCPFMD 242

Query: 256 RSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
             +  ++  +  +  E P  P  +   +++++    + +  SR ++ +I  
Sbjct: 243 ERIMCLHSKIKSQALEFPDQPD-IAEDLKDLITRMLDKNPESRIVVPEIKL 292

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 53/255 (20%), Positives = 88/255 (34%), Gaps = 68/255 (26%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-------PVKEDRMRVLLE--- 93
           ++   +G G F  V        T       E A K +             R  +  E   
Sbjct: 8   EMGEELGSGQFAIVRKCRQ-KGTG-----KEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 94  ----------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLK 140
                      L+D+F      E              + +I++   G  G   D +A+  
Sbjct: 62  LREIRHPNIITLHDIF------EN----------KTDVVLILELVSG--GELFDFLAE-- 101

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAV-LGDVGIPHL 196
              L+     ++   +  G+  LHSK I   +LKP N +L   N  +  + L D GI H 
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161

Query: 197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQP 252
           +       ++     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P
Sbjct: 162 I----EAGNEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASP 210

Query: 253 RCGRSVDEIYDAVVR 267
             G +  E    +  
Sbjct: 211 FLGETKQETLTNISA 225

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 63.4 bits (155), Expect = 4e-11
 Identities = 48/255 (18%), Positives = 83/255 (32%), Gaps = 68/255 (26%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-------PVKEDRMRVLLE--- 93
                +G G F  V       ST       + A K +             R  +  E   
Sbjct: 14  DTGEELGSGQFAVVKKCRE-KSTG-----LQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67

Query: 94  ----------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLK 140
                      L++++      E              + +I++   G  G   D +A+  
Sbjct: 68  LKEIQHPNVITLHEVY------EN----------KTDVILILELVAG--GELFDFLAE-- 107

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHL 196
              L+      +   +  G+  LHS  I   +LKP N +L      +  +   D G+ H 
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167

Query: 197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQP 252
           +       ++     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P
Sbjct: 168 I----DFGNEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASP 216

Query: 253 RCGRSVDEIYDAVVR 267
             G +  E    V  
Sbjct: 217 FLGDTKQETLANVSA 231

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 51/255 (20%), Positives = 83/255 (32%), Gaps = 68/255 (26%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-------PVKEDRMRVLLE--- 93
            +   +G G F  V       ST       E A K +             R  +  E   
Sbjct: 15  DIGEELGSGQFAIVKKCRE-KSTG-----LEYAAKFIKKRQSRASRRGVCREEIEREVSI 68

Query: 94  ----------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLK 140
                      L+D++      E              + +I++   G  G   D +AQ  
Sbjct: 69  LRQVLHPNIITLHDVY------EN----------RTDVVLILELVSG--GELFDFLAQ-- 108

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHL 196
              LS      +   +  G+  LH+K I   +LKP N +L         +   D G+ H 
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168

Query: 197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQP 252
           +        +     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P
Sbjct: 169 I----EDGVEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASP 217

Query: 253 RCGRSVDEIYDAVVR 267
             G +  E    +  
Sbjct: 218 FLGDTKQETLANITA 232

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 59/313 (18%), Positives = 102/313 (32%), Gaps = 80/313 (25%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I      L   +G+G FG V  A      ++   + +VAVK+L   K D +      + +
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQ---LKQEDGSFVKVAVKML---KADIIAS--SDIEE 71

Query: 98  LF--------LKCQGV---EGICWLQGISVINGKICIIMKFYEGSVGD-------RMAQL 139
                          V    G+              +I+ F +   GD            
Sbjct: 72  FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH--GDLHAFLLASRIGE 129

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLG 189
               L L  + R+ +D+A G+  L S+          NFI          L E     + 
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSR----------NFIHRDLAARNCMLAEDMTVCVA 179

Query: 190 DVGIPHLLLGIPLPSSDLPRRLGTPNY-------------MAPEQWQPEVRGPISFETDS 236
           D G              L R++ + +Y             +A E          +  +D 
Sbjct: 180 DFG--------------LSRKIYSGDYYRQGCASKLPVKWLALESLA---DNLYTVHSDV 222

Query: 237 WGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
           W F  ++ E++T G  P  G    EIY+ ++    +   P      V +++  C+  D +
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ-PPECMEEVYDLMYQCWSADPK 281

Query: 296 SRPLMTDILRVFK 308
            RP  T +    +
Sbjct: 282 QRPSFTCLRMELE 294

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 63.0 bits (154), Expect = 5e-11
 Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 40/269 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV---------LLERLNDLF 99
           +G+G FG V+LA    +         +A+K+L   + ++  V         +   L    
Sbjct: 22  LGKGKFGNVYLAREKQNK------FIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
                   I  +        +I ++++F     G+   +L K G+        +  +LA 
Sbjct: 76  --------ILRMYNYFHDRKRIYLMLEFAPR--GELYKELQKHGRFDEQRSATFMEELAD 125

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
            +   H + ++  ++KP N ++       + D G       +  PS       GT +Y+ 
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFG-----WSVHAPSLRRRTMCGTLDYLP 180

Query: 219 PEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           PE  + +       + D W     ++  E L G+ P    S  E +  +V        P 
Sbjct: 181 PEMIEGKTHDE---KVDLW--CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--LKFPP 233

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            L    ++++     Y    R  +  ++ 
Sbjct: 234 FLSDGSKDLISKLLRYHPPQRLPLKGVME 262

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 65/362 (17%), Positives = 121/362 (33%), Gaps = 86/362 (23%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           A  +  + + +   +G G FGEV      L ++       VA+K L   K        E+
Sbjct: 39  AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKK---EISVAIKTL---KVGYT----EK 88

Query: 95  LNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GG 142
               FL     E           I  L+G+   +  + I+ ++ E   G   + L+    
Sbjct: 89  QRRDFLG----EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN--GSLDSFLRKHDA 142

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEADRAVLGDVG 192
           + ++  +      +A G+  L   G          IL+          N      + D G
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI----------NSNLVCKVSDFG 192

Query: 193 IPHLLLGIPLP-----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML 247
           +  +L   P          +P R     + +PE          +  +D W +   + E++
Sbjct: 193 LGRVLEDDPEAAYTTRGGKIPIR-----WTSPEAIA---YRKFTSASDVWSYGIVLWEVM 244

Query: 248 T-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 306
           + G +P    S  ++  AV     +PP P   P A+  ++L C++ D  +RP    I+ +
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303

Query: 307 FKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRV 366
                                   +   +   LK+     +R         N+D+   R 
Sbjct: 304 L----------------------DKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRT 341

Query: 367 VG 368
            G
Sbjct: 342 TG 343

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 63.0 bits (154), Expect = 5e-11
 Identities = 70/302 (23%), Positives = 113/302 (37%), Gaps = 52/302 (17%)

Query: 32  NDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV 90
             +    I    L+L  ++G G FG V                 VAVK L   K D +  
Sbjct: 8   LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGE--WDAPSGKTV-SVAVKCL---KPDVL-- 59

Query: 91  LLERLNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
                 D F++    E           +  L G+ V+   + ++ +    GS+ DR+ + 
Sbjct: 60  SQPEAMDDFIR----EVNAMHSLDHRNLIRLYGV-VLTPPMKMVTELAPLGSLLDRL-RK 113

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 199
             G   L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +GD G       
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG------- 166

Query: 200 IPLPSSDLPRRLGTPN--YMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT 248
                  L R L   +  Y+       P  W  PE       S  +D+W F  ++ EM T
Sbjct: 167 -------LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

Query: 249 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
            G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP    +    
Sbjct: 220 YGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279

Query: 308 KS 309
             
Sbjct: 280 LE 281

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 66/302 (21%), Positives = 108/302 (35%), Gaps = 63/302 (20%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
              I PS +  +  IG G FGEV+     L T    +   VA+K L   K        E+
Sbjct: 38  TTEIHPSCVTRQKVIGAGEFGEVYKGM--LKTSSGKKEVPVAIKTL---KAGYT----EK 88

Query: 95  LNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GG 142
               FL     E           I  L+G+      + II ++ E   G     L+   G
Sbjct: 89  QRVDFLG----EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMEN--GALDKFLREKDG 142

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEADRAVLGDVG 192
           + S+  +      +A G+  L +            ILV          N      + D G
Sbjct: 143 EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----------NSNLVCKVSDFG 192

Query: 193 IPHLLLGIPLPS-----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML 247
           +  +L   P  +       +P R     + APE          +  +D W F   + E++
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIR-----WTAPEAIS---YRKFTSASDVWSFGIVMWEVM 244

Query: 248 T-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 306
           T G +P    S  E+  A+     +P  P   P A+  +++ C++ +   RP   DI+ +
Sbjct: 245 TYGERPYWELSNHEVMKAINDGFRLPT-PMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303

Query: 307 FK 308
             
Sbjct: 304 LD 305

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 63.2 bits (154), Expect = 6e-11
 Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 29/219 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLK- 101
                IG G FG V+ A    ++E       VA+K +    +       + + +  FL+ 
Sbjct: 57  SDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLS---LSNVFRYAIDLAQ 158
            +        +G  +      ++M++  GS  D + ++    L    ++ V        Q
Sbjct: 111 LRH-PNTIQYRGCYLREHTAWLVMEYCLGSASDLL-EVHKKPLQEVEIAAVTH---GALQ 165

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPN 215
           G+  LHS  ++  ++K  N +L+E     LGD G           +S +      +GTP 
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS----------ASIMAPANSFVGTPY 215

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
           +MAPE       G    + D W    + IE+     P  
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 63.1 bits (154), Expect = 7e-11
 Identities = 54/238 (22%), Positives = 84/238 (35%), Gaps = 42/238 (17%)

Query: 46  RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
           +  +G G  G+V    H   T       + A+K+L     D  +   E   D   +  G 
Sbjct: 34  KQVLGLGVNGKVLECFH-RRTGQ-----KCALKLL----YDSPKARQE--VDHHWQASGG 81

Query: 106 EGICWLQGI----SVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFRYAID 155
             I  +  +          + IIM+  EG  G    R+ +      +    + + R   D
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEG--GELFSRIQERGDQAFTEREAAEIMR---D 136

Query: 156 LAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLG 212
           +   I  LHS  I   ++KP N +  ++   AVL   D G            + L     
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG-----FAKETTQNALQTPCY 191

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAVVRR 268
           TP Y+APE   PE         D W  +  +I   +L G  P    +   I   + RR
Sbjct: 192 TPYYVAPEVLGPEKYDK---SCDMW--SLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 62.3 bits (152), Expect = 8e-11
 Identities = 48/251 (19%), Positives = 94/251 (37%), Gaps = 63/251 (25%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLE-------- 93
             + ++G G FG+V L     S        E  +K ++    +    ++  E        
Sbjct: 25  IFKRKLGSGAFGDVHLVEERSSGL------ERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78

Query: 94  -----RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS 145
                ++ ++F      E              + I+M+  EG  G   +R+   +    +
Sbjct: 79  HPNIIKIFEVF------ED----------YHNMYIVMETCEG--GELLERIVSAQARGKA 120

Query: 146 LSNVFRYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLL 198
           LS    Y  +L + ++      HS+ ++  +LKP N +  + +  + +   D G+  L  
Sbjct: 121 LSE--GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178

Query: 199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGR 256
                        GT  YMAPE      +  ++F+ D W  +  ++   +LTG  P  G 
Sbjct: 179 ----SDEHSTNAAGTALYMAPEV----FKRDVTFKCDIW--SAGVVMYFLLTGCLPFTGT 228

Query: 257 SVDEIYDAVVR 267
           S++E+      
Sbjct: 229 SLEEVQQKATY 239

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 62.7 bits (153), Expect = 8e-11
 Identities = 56/316 (17%), Positives = 101/316 (31%), Gaps = 87/316 (27%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    + +   +G+G FG V+           +    VA+K +    E       ER+  
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTV---NEAASMR--ERIE- 74

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEG---------SVGDRMAQ 138
            FL     E           +  L G+        +IM+                     
Sbjct: 75  -FLN----EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129

Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVGIPH 195
                 SLS + + A ++A G+  L++            F+   L  A R  +  V    
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNAN----------KFVHRDL--AARNCM--VA-ED 174

Query: 196 LLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISF-------E 233
             + I     D  + R +   +Y             M+PE          S         
Sbjct: 175 FTVKI----GDFGMTRDIYETDYYRKGGKGLLPVRWMSPE----------SLKDGVFTTY 220

Query: 234 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 292
           +D W F   + E+ T   QP  G S +++   V+    +   P   P  +  ++  C++Y
Sbjct: 221 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQY 279

Query: 293 DLRSRPLMTDILRVFK 308
           + + RP   +I+   K
Sbjct: 280 NPKMRPSFLEIISSIK 295

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 61.8 bits (151), Expect = 1e-10
 Identities = 54/286 (18%), Positives = 98/286 (34%), Gaps = 40/286 (13%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
             +K   + L   +G G FG V L             ++VAVK++   KE  M       
Sbjct: 3   MELKREEITLLKELGSGQFGVVKLGK-------WKGQYDVAVKMI---KEGSMSE----- 47

Query: 96  NDLFLKCQGV------EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLS 147
            D F +            +    G+      I I+ ++     G  +  L+  G  L  S
Sbjct: 48  -DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN--GCLLNYLRSHGKGLEPS 104

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
            +     D+ +G+  L S   +  +L   N +++      + D G     +   +     
Sbjct: 105 QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG-----MTRYVLDDQY 159

Query: 208 PRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
              +GT     P +W  PEV      S ++D W F   + E+ + G  P    +  E+  
Sbjct: 160 VSSVGT---KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216

Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            V +   +   P      +  ++  C+      RP    +L   + 
Sbjct: 217 KVSQGHRLYR-PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 54/295 (18%), Positives = 104/295 (35%), Gaps = 58/295 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K +  K    +G G FG V+        E       VA+K L   +E        + N 
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGL--WIPEGEKVKIPVAIKEL---REATS----PKANK 62

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSL 146
             L     E           +C L GI  +   + +I +    G + D + +     +  
Sbjct: 63  EILD----EAYVMASVDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYV-REHKDNIGS 116

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             +  + + +A+G+  L  + ++  +L   N ++       + D G              
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-------------- 162

Query: 207 LPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
           L + LG                 MA E          + ++D W +  ++ E++T G +P
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
             G    EI   + + + +P  P      V  +++ C+  D  SRP   +++  F
Sbjct: 220 YDGIPASEISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 82/325 (25%)

Query: 30  TSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
             +D     IK   + L+  +G G FG+V+LA    +     +   VAVK L   KE   
Sbjct: 29  YFSDACVHHIKRRDIVLKWELGEGAFGKVFLA-ECHNLLPEQDKMLVAVKAL---KEASE 84

Query: 89  RVLLERLNDL----FLKCQGVEGICWLQGISVINGKICIIMKF--------------YEG 130
               +   +      L+ Q +  +    G+      + ++ ++               + 
Sbjct: 85  SARQDFQREAELLTMLQHQHI--VR-FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 141

Query: 131 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAV 187
            +      +  G L L  +   A  +A G++ L             +F+   L  A R  
Sbjct: 142 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL----------HFVHRDL--ATRNC 189

Query: 188 LGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISF 232
           L  VG   L++ I     D  + R + + +Y             M PE          S 
Sbjct: 190 L--VG-QGLVVKI----GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE----------SI 232

Query: 233 -------ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN 284
                  E+D W F   + E+ T G QP    S  E  D + + +E+   P   PP V  
Sbjct: 233 LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRACPPEVYA 291

Query: 285 VLLGCFEYDLRSRPLMTDILRVFKS 309
           ++ GC++ + + R  + D+    ++
Sbjct: 292 IMRGCWQREPQQRHSIKDVHARLQA 316

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 28/279 (10%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           +W I P  L     +G G FG V               ++VA+K++          + E 
Sbjct: 18  SWEIDPKDLTFLKELGTGQFGVVKYGK-------WRGQYDVAIKMIKEGSMSEDEFIEEA 70

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRY 152
              + L     E +  L G+      I II ++     G  +  L+    +     +   
Sbjct: 71  KVMMNLSH---EKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQLLEM 125

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
             D+ + +  L SK  L  +L   N ++N+     + D G     L   +   +    +G
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG-----LSRYVLDDEYTSSVG 180

Query: 213 TPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
           +     P +W  PEV      S ++D W F   + E+ + G  P    +  E  + + + 
Sbjct: 181 S---KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237

Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
             +   P      V  ++  C+      RP    +L   
Sbjct: 238 LRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 60/307 (19%), Positives = 105/307 (34%), Gaps = 80/307 (26%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I    + L   +G G FGEV+      +    ++ + VAVK     K+D          +
Sbjct: 9   IAREDVVLNRILGEGFFGEVYEGV--YTNHKGEKIN-VAVKTC---KKDCT----LDNKE 58

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLS 145
            F+     E           I  L GI +      IIM+ Y    G+    L+     L 
Sbjct: 59  KFMS----EAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPY--GELGHYLERNKNSLK 111

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPH 195
           +  +  Y++ + + +  L S           N +          +   +   LGD G   
Sbjct: 112 VLTLVLYSLQICKAMAYLESI----------NCVHRDIAVRNILVASPECVKLGDFG--- 158

Query: 196 LLLGIPLPSSDLPRRLGTPNY------------MAPEQWQPEVRGPISFETDSWGFACSI 243
                      L R +   +Y            M+PE          +  +D W FA  +
Sbjct: 159 -----------LSRYIEDEDYYKASVTRLPIKWMSPESIN---FRRFTTASDVWMFAVCM 204

Query: 244 IEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 302
            E+L+ G QP       ++   + +   +P  P   PP +  ++  C++YD   RP  T+
Sbjct: 205 WEILSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTE 263

Query: 303 ILRVFKS 309
           ++     
Sbjct: 264 LVCSLSD 270

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 62.6 bits (152), Expect = 2e-10
 Identities = 63/306 (20%), Positives = 109/306 (35%), Gaps = 78/306 (25%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V    +            VA+K     K        + + +
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPEN---PAMAVAIKTC---KNCTS----DSVRE 436

Query: 98  LFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSL 146
            FL+    E           I  L G+ +    + IIM+    G +   + Q++   L L
Sbjct: 437 KFLQ----EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL-QVRKFSLDL 490

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPHL 196
           +++  YA  L+  +  L SK           F+          ++  D   LGD G    
Sbjct: 491 ASLILYAYQLSTALAYLESK----------RFVHRDIAARNVLVSSNDCVKLGDFG---- 536

Query: 197 LLGIPLPSSDLPRRLGTPNY------------MAPEQWQPEVRGPISFETDSWGFACSII 244
                     L R +    Y            MAPE          +  +D W F   + 
Sbjct: 537 ----------LSRYMEDSTYYKASKGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMW 583

Query: 245 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
           E+L  GV+P  G   +++   +   + +P  P   PP + +++  C+ YD   RP  T++
Sbjct: 584 EILMHGVKPFQGVKNNDVIGRIENGERLPM-PPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

Query: 304 LRVFKS 309
                +
Sbjct: 643 KAQLST 648

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 66/317 (20%), Positives = 112/317 (35%), Gaps = 81/317 (25%)

Query: 29  ATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           A  + T  + I+   ++L   IG G FG+V    +            VA+K     K   
Sbjct: 2   AMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PALAVAIKTC---KNCT 55

Query: 88  MRVLLERLNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMA 137
                + + + FL+    E           I  L G+ +    + IIM+      G+  +
Sbjct: 56  S----DSVREKFLQ----EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTL--GELRS 104

Query: 138 QLK--GGKLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEADR 185
            L+     L L+++  YA  L+  +  L SK           +LV          +  D 
Sbjct: 105 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----------SSNDC 154

Query: 186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY------------MAPEQWQPEVRGPISFE 233
             LGD G              L R +    Y            MAPE          +  
Sbjct: 155 VKLGDFG--------------LSRYMEDSTYYKASKGKLPIKWMAPESIN---FRRFTSA 197

Query: 234 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 292
           +D W F   + E+L  GV+P  G   +++   +   + +P  P   PP + +++  C+ Y
Sbjct: 198 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM-PPNCPPTLYSLMTKCWAY 256

Query: 293 DLRSRPLMTDILRVFKS 309
           D   RP  T++     +
Sbjct: 257 DPSRRPRFTELKAQLST 273

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 60.9 bits (148), Expect = 4e-10
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           ++  +IG G FGE+ L  +  + E       VA+K+            L      + +  
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNE------YVAIKLEPMKSRAPQ---LHLEYRFYKQLG 62

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
             +GI  +           ++++    S+ D +  L     SL  V   AI L   +  +
Sbjct: 63  SGDGIPQVYYFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYV 121

Query: 164 HSKGILVLNLKPFNFIL 180
           HSK ++  ++KP NF++
Sbjct: 122 HSKNLIYRDVKPENFLI 138

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 60.4 bits (147), Expect = 5e-10
 Identities = 59/275 (21%), Positives = 105/275 (38%), Gaps = 51/275 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLNDLFLKCQGV 105
           IG+G F +V LA H L+        EVA+KI+   +       ++  E            
Sbjct: 23  IGKGNFAKVKLARHILTG------REVAIKIIDKTQLNPTSLQKLFRE------------ 64

Query: 106 EGICWLQGIS---------VI--NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
             +  ++ ++         VI     + +IM++   G V D +     G++         
Sbjct: 65  --VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKF 120

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             +   +   H K I+  +LK  N +L+      + D G              L    G 
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG----FSNEFTVGGKLDAFCGA 176

Query: 214 PNYMAPEQWQ-PEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQE 270
           P Y APE +Q  +  GP   E D W  +  +I   +++G  P  G+++ E+ + V+R   
Sbjct: 177 PPYAAPELFQGKKYDGP---EVDVW--SLGVILYTLVSGSLPFDGQNLKELRERVLR--G 229

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
              IP  +    EN+L      +   R  +  I++
Sbjct: 230 KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 60.1 bits (146), Expect = 6e-10
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 57/279 (20%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-CQGVE 106
           +IG G  G V LA    S        +VAVK++   K+ R  +L   +    ++  Q   
Sbjct: 52  KIGEGSTGIVCLAREKHSGR------QVAVKMMDLRKQQRRELLFNEVV--IMRDYQH-F 102

Query: 107 GICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
            +  +    ++  ++ ++M+F + G++ D ++Q++  +  ++ V      + Q +  LH+
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHA 159

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQW 222
           +G++  ++K  + +L    R  L D G    +      S D+P+R   +GTP +MAPE  
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKSLVGTPYWMAPEVI 213

Query: 223 QPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------IPS 276
               R   + E D W     +IEM+ G  P                    P      +  
Sbjct: 214 S---RSLYATEVDIWSLGIMVIEMVDGEPPYF---------------SDSPVQAMKRLRD 255

Query: 277 GLPPAVENV----------LLGCFEYDLRSRPLMTDILR 305
             PP ++N           L      D + R    ++L 
Sbjct: 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 60.8 bits (147), Expect = 7e-10
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +L  +IG G FGE++L T+  + E      EVA+K+ +   +      L   + ++   Q
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNE------EVAIKLENVKTKHPQ---LLYESKIYRILQ 60

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           G  GI  ++   V      ++M     S+ D +      KLSL  V   A  +   +  +
Sbjct: 61  GGTGIPNVRWFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFV 119

Query: 164 HSKGILVLNLKPFNFIL---NEADRAVLGDVGI 193
           HSK  L  ++KP NF++     A++  + D G+
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 59.7 bits (145), Expect = 8e-10
 Identities = 52/253 (20%), Positives = 92/253 (36%), Gaps = 53/253 (20%)

Query: 29  ATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR 87
           +  +    W I     +L+  IG G    V  A      E      +VA+K ++      
Sbjct: 2   SEDSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKE------KVAIKRIN------ 49

Query: 88  MRVLLERLNDLFLKCQGVEGICWLQGISV-----------------INGKICIIMKFYE- 129
               LE+          ++ +  L+ I                   +  ++ ++MK    
Sbjct: 50  ----LEKCQT------SMDEL--LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97

Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAI------DLAQGILQLHSKGILVLNLKPFNFILNEA 183
           GSV D +  +       S V   +       ++ +G+  LH  G +  ++K  N +L E 
Sbjct: 98  GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157

Query: 184 DRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFAC 241
               + D G+   L      + +  R+  +GTP +MAPE  +        F+ D W F  
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGI 215

Query: 242 SIIEMLTGVQPRC 254
           + IE+ TG  P  
Sbjct: 216 TAIELATGAAPYH 228

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 59.1 bits (144), Expect = 8e-10
 Identities = 62/318 (19%), Positives = 106/318 (33%), Gaps = 83/318 (26%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV------- 90
           I  SA++    +G   FG+V+           ++   VA+K L    E  +R        
Sbjct: 6   ISLSAVRFMEELGEDRFGKVYKGH-LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64

Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKF---------------YEGSVGDR 135
           L  RL            +  L G+   +  + +I  +               +       
Sbjct: 65  LRARLQH--------PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116

Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVG 192
             +     L   +       +A G+  L S           + +   L  A R VL  V 
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH----------HVVHKDL--ATRNVL--VY 162

Query: 193 IPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISF----- 232
              L + I    SD  L R +   +Y             MAPE         I +     
Sbjct: 163 -DKLNVKI----SDLGLFREVYAADYYKLLGNSLLPIRWMAPEA--------IMYGKFSI 209

Query: 233 ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 291
           ++D W +   + E+ + G+QP CG S  ++ + +  RQ +P  P   P  V  +++ C+ 
Sbjct: 210 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDDCPAWVYALMIECWN 268

Query: 292 YDLRSRPLMTDILRVFKS 309
                RP   DI    ++
Sbjct: 269 EFPSRRPRFKDIHSRLRA 286

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 59.1 bits (144), Expect = 8e-10
 Identities = 53/288 (18%), Positives = 94/288 (32%), Gaps = 75/288 (26%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLKCQGVE 106
           +G+G F  V+ A    +        EVA+K++    + +  M   ++            E
Sbjct: 19  LGKGSFAGVYRAESIHTG------LEVAIKMIDKKAMYKAGMVQRVQN-----------E 61

Query: 107 GICWLQGISVINGKICI--------IMKFYE-----------------GSVGDRMAQLKG 141
                         + I        I++ Y                  G +   +   + 
Sbjct: 62  --------------VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RV 106

Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 201
              S +    +   +  G+L LHS GIL  +L   N +L       + D G     L   
Sbjct: 107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG-----LATQ 161

Query: 202 LPSSDLPRRL--GTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRS 257
           L           GTPNY++PE      R     E+D W  +   +   +L G  P    +
Sbjct: 162 LKMPHEKHYTLCGTPNYISPEIAT---RSAHGLESDVW--SLGCMFYTLLIGRPPFDTDT 216

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           V    + VV       +PS L    ++++      +   R  ++ +L 
Sbjct: 217 VKNTLNKVVLADYE--MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 59.9 bits (145), Expect = 9e-10
 Identities = 34/284 (11%), Positives = 92/284 (32%), Gaps = 52/284 (18%)

Query: 23  HLRTAVATSNDTNAWIKPSAL-KLRHRIGRGP--FGEVWLATHYLSTEDCDEYHEVAVKI 79
           H           ++++      +L   IG+G      V LA +  + E       V V+ 
Sbjct: 6   HHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGE------YVTVRR 59

Query: 80  LHPVKEDRMRVLLERLNDL-----FLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVG 133
           ++           E +  L       K      I   +   + + ++ ++  F   GS  
Sbjct: 60  INLEACSN-----EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 114

Query: 134 DRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
           D +       ++   ++ + +    + + +  +H  G +  ++K  + +++   +  L  
Sbjct: 115 DLICTHFMDGMNELAIAYILQ---GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSG 171

Query: 191 VGIPHLLLGI----PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 246
           +     ++       +        +    +++PE  Q  ++G    ++D +    +  E+
Sbjct: 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQG-YDAKSDIYSVGITACEL 230

Query: 247 LTGVQPRCGRSVDEIYDAVVRRQEIPP------IPSGLPPAVEN 284
             G  P                 ++P         +G  P + +
Sbjct: 231 ANGHVPFK---------------DMPATQMLLEKLNGTVPCLLD 259

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 46/273 (16%), Positives = 84/273 (30%), Gaps = 46/273 (16%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ----- 103
           +G G FG V+                VA+K +     ++ R+          +       
Sbjct: 51  LGSGGFGSVYSGIRVSDNL------PVAIKHV-----EKDRISDWGELPNGTRVPMEVVL 99

Query: 104 ------GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDL 156
                 G  G+  L           +I++  E    D    + + G L       +   +
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPV-QDLFDFITERGALQEELARSFFWQV 158

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
            + +   H+ G+L  ++K  N +++     + L D G   LL        D     GT  
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-----GTRV 213

Query: 216 YMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           Y  PE  +     G        W  +  I+  +M+ G  P      +EI    V      
Sbjct: 214 YSPPEWIRYHRYHGR---SAAVW--SLGILLYDMVCGDIPFEHD--EEIIRGQVF----- 261

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                +    ++++  C       RP   +I  
Sbjct: 262 -FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 58/332 (17%), Positives = 115/332 (34%), Gaps = 59/332 (17%)

Query: 11  ADFEYEVFDDSDHLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDC 69
            D++    ++        +   D +    +   LK   ++G+G FG V +  +    ++ 
Sbjct: 10  HDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNT 69

Query: 70  DEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEGICWLQGISVINGK--ICIIMK 126
            E   VAVK L    E+ +R     +  L  L+    + I   +G+    G+  + +IM+
Sbjct: 70  GE--VVAVKKLQHSTEEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNLKLIME 124

Query: 127 FYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKP 175
           +   GS+ D + Q    ++    + +Y   + +G+  L +K           ILV N   
Sbjct: 125 YLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN--- 180

Query: 176 FNFILNEAD----RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPIS 231
               +   D    + +  D     +         + P       + APE          S
Sbjct: 181 -ENRVKIGDFGLTKVLPQDKEYYKVKEP-----GESPIF-----WYAPESLT---ESKFS 226

Query: 232 FETDSWGFACSIIEMLT----------------GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
             +D W F   + E+ T                G   +    V  + + +     +P  P
Sbjct: 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-P 285

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
            G P  +  ++  C+  ++  RP   D+    
Sbjct: 286 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 47/273 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERLNDLFLKCQGVE 106
           +G G FG+V LATHY +        +VA+K +    +K+  M + +ER           E
Sbjct: 17  LGEGSFGKVKLATHYKTQ------QKVALKFISRQLLKKSDMHMRVER-----------E 59

Query: 107 GICWLQGIS---------VI--NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
            I +L+ +          VI     I +++++  G + D +   +  +++     R+   
Sbjct: 60  -ISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQ 116

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           +   I   H   I+  +LKP N +L++     + D G    L  I    + L    G+PN
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG----LSNIMTDGNFLKTSCGSPN 172

Query: 216 YMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           Y APE    ++  GP   E D W  +C I+   ML G  P     +  ++  V     + 
Sbjct: 173 YAAPEVINGKLYAGP---EVDVW--SCGIVLYVMLVGRLPFDDEFIPNLFKKVNS--CVY 225

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            +P  L P  ++++      D   R  + +I R
Sbjct: 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +L  +IG G FG+++L T   + E      EVA+K+            L   + ++   Q
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGE------EVAIKL---ECVKTKHPQLHIESKIYKMMQ 62

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           G  GI  ++          ++M+    S+ D +      K SL  V   A  +   I  +
Sbjct: 63  GGVGIPTIRWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 121

Query: 164 HSKGILVLNLKPFNFIL 180
           HSK  +  ++KP NF++
Sbjct: 122 HSKNFIHRDVKPDNFLM 138

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 59/298 (19%), Positives = 107/298 (35%), Gaps = 45/298 (15%)

Query: 14  EYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
             + F               +    +         +G G FG V L  H    ++   ++
Sbjct: 14  SVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH----KESGNHY 69

Query: 74  EVAVKIL---HPVKEDRM------RVLLERLNDLFLKCQGVEGICWLQGISVINGKICII 124
             A+KIL     VK  ++      + +L+ +N  F        +  L+     N  + ++
Sbjct: 70  --AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF--------LVKLEFSFKDNSNLYMV 119

Query: 125 MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
           M++  G  G+  + L + G+ S  +   YA  +      LHS  ++  +LKP N ++++ 
Sbjct: 120 MEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ 177

Query: 184 DRAVLGDVGIPHLLLGIPLPSSDLPRRL----GTPNYMAPEQWQPEVRGPISFETDSWGF 239
               + D G           +  +  R     GTP  +APE          +   D W  
Sbjct: 178 GYIQVTDFGF----------AKRVKGRTWTLCGTPEALAPEIIL---SKGYNKAVDWWAL 224

Query: 240 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
              I EM  G  P       +IY+ +V        PS     ++++L    + DL  R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 10/137 (7%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           K+  RIG G FG ++  T+ L+ +      +VA+K             L      +    
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQ------QVAIKF---EPRRSDAPQLRDEYRTYKLLA 63

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           G  GI  +           +++     S+ D +  L G K S+  V   A  +   +  +
Sbjct: 64  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSI 122

Query: 164 HSKGILVLNLKPFNFIL 180
           H K ++  ++KP NF++
Sbjct: 123 HEKSLVYRDIKPDNFLI 139

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 48/290 (16%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W ++ + + ++H++G G +GEV+                VAVK L   KED M V    
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVW------KKYSLTVAVKTL---KEDTMEV---- 53

Query: 95  LNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLS 147
             + FLK   V        +  L G+        II +F   G++ D + +    ++S  
Sbjct: 54  --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 111

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
            +   A  ++  +  L  K  +  +L   N ++ E     + D G              L
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG--------------L 157

Query: 208 PRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRS 257
            R +    Y A      P +W  PE       S ++D W F   + E+ T G+ P  G  
Sbjct: 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           + ++Y+ + +   +   P G P  V  ++  C++++   RP   +I + F
Sbjct: 218 LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 57.9 bits (141), Expect = 3e-09
 Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 45/263 (17%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRM------RVLLERLNDLF 99
           +G G FG V L            Y+  A+K+L     V+  ++      R++L  +   F
Sbjct: 14  LGTGSFGRVHLIRS----RHNGRYY--AMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
           +    +      Q       +I +IM + EG  G+  + L K  +        YA ++  
Sbjct: 68  I----IRMWGTFQD----AQQIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCL 117

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL----GTP 214
            +  LHSK I+  +LKP N +L++     + D G           +  +P       GTP
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF----------AKYVPDVTYTLCGTP 167

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI 274
           +Y+APE        P +   D W F   I EML G  P    +  + Y+ ++        
Sbjct: 168 DYIAPEVVS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL--NAELRF 222

Query: 275 PSGLPPAVENVLLGCFEYDLRSR 297
           P      V+++L      DL  R
Sbjct: 223 PPFFNEDVKDLLSRLITRDLSQR 245

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 38/237 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
            +   +G+G FGEV        T+      E AVK++     ++     +  + +     
Sbjct: 25  NIVCMLGKGSFGEVLKCKD-RITQ-----QEYAVKVI-----NKASAKNKDTSTILREVE 73

Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAID 155
            LK      I  L  I   +    I+ + Y G  G   D +  +K  + S  +  R    
Sbjct: 74  LLKKLDHPNIMKLFEILEDSSSFYIVGELYTG--GELFDEI--IKRKRFSEHDAARIIKQ 129

Query: 156 LAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLG 212
           +  GI  +H   I+  +LKP N +L ++     +   D G    L      ++ +  R+G
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG----LSTCFQQNTKMKDRIG 185

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAVVR 267
           T  Y+APE     +RG    + D W  +  +I   +L+G  P  G++  +I   V  
Sbjct: 186 TAYYIAPEV----LRGTYDEKCDVW--SAGVILYILLSGTPPFYGKNEYDILKRVET 236

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 63/300 (21%), Positives = 103/300 (34%), Gaps = 62/300 (20%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
              I+ S + +   IG G  GEV      L      +   VA+K L   K        ER
Sbjct: 43  TREIEASRIHIEKIIGSGDSGEVCYGR--LRVPGQRDV-PVAIKAL---KAGYT----ER 92

Query: 95  LNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GG 142
               FL     E           I  L+G+        I+ ++ E   G     L+   G
Sbjct: 93  QRRDFLS----EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN--GSLDTFLRTHDG 146

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEAD----RAVL 188
           + ++  +      +  G+  L   G          +LV +    N +   +D    R + 
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS----NLVCKVSDFGLSRVLE 202

Query: 189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
            D    +   G       +P R     + APE          S  +D W F   + E+L 
Sbjct: 203 DDPDAAYTTTG-----GKIPIR-----WTAPEAIA---FRTFSSASDVWSFGVVMWEVLA 249

Query: 249 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
            G +P    +  ++  +V     +P  P G P A+  ++L C+  D   RP  + I+ V 
Sbjct: 250 YGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 57.8 bits (140), Expect = 4e-09
 Identities = 43/290 (14%), Positives = 88/290 (30%), Gaps = 54/290 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
           + +G F ++ L                A+K       ++ R   +  ND        +  
Sbjct: 39  LNQGKFNKIILCEK---DN-----KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90

Query: 108 ---ICWLQGIS---------VI--NGKICIIMKFYEG-------SVGDRMAQLKGGKLSL 146
              +  +  I          +I    ++ II ++ E             + +     + +
Sbjct: 91  KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150

Query: 147 SNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS 205
             +      +      +H+ K I   ++KP N ++++  R  L D G         +   
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-----ESEYMVDK 205

Query: 206 DLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSII--EMLTGVQP-RCGRSVDE 260
            +    GT  +M PE    +    G    + D W  +  I    M   V P     S+ E
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGA---KVDIW--SLGICLYVMFYNVVPFSLKISLVE 260

Query: 261 IYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEY-------DLRSRPLMTD 302
           +++ +  +  E P   +     + N    C          D     L  +
Sbjct: 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN 310

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 31/219 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-C 102
               +IG+G FGEV+      + +       VA+KI+  ++E    +   +     L  C
Sbjct: 25  TKLEKIGKGSFGEVFKGIDNRTQK------VVAIKII-DLEEAEDEIEDIQQEITVLSQC 77

Query: 103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQ 158
                +    G  + + K+ IIM++   GS  D +   + G L    ++ + R   ++ +
Sbjct: 78  DS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR---EILK 130

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPN 215
           G+  LHS+  +  ++K  N +L+E     L D G+   L      +    +R   +GTP 
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL------TDTQIKRNTFVGTPF 184

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
           +MAPE  +   +     + D W    + IE+  G  P  
Sbjct: 185 WMAPEVIK---QSAYDSKADIWSLGITAIELARGEPPHS 220

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 56/304 (18%), Positives = 107/304 (35%), Gaps = 58/304 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
            +   LK   ++G+G FG V +  +    ++  E   VAVK L    E+ +R     +  
Sbjct: 7   FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEI 64

Query: 98  L-FLKCQGVEGICWLQGISVINGK--ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
           L  L+    + I   +G+    G+  + +IM++   GS+ D + Q    ++    + +Y 
Sbjct: 65  LKSLQH---DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYT 120

Query: 154 IDLAQGILQLHSKG----------ILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG 199
             + +G+  L +K           ILV N       +   D    + +  D     +   
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVEN----ENRVKIGDFGLTKVLPQDKEFFKVKEP 176

Query: 200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT----------- 248
                 + P       + APE          S  +D W F   + E+ T           
Sbjct: 177 -----GESPIF-----WYAPESLT---ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 223

Query: 249 -----GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
                G   +    V  + + +     +P  P G P  +  ++  C+  ++  RP   D+
Sbjct: 224 FMRMIGNDKQGQMIVFHLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDL 282

Query: 304 LRVF 307
               
Sbjct: 283 ALRV 286

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 53/280 (18%), Positives = 108/280 (38%), Gaps = 57/280 (20%)

Query: 47  HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-CQGV 105
            +IG+G  G V+ A    + +      EVA++ ++  ++ +  +++  +  L ++  +  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEI--LVMRENKN- 76

Query: 106 EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
             I       ++  ++ ++M++   GS+ D + +    +  ++ V R   +  Q +  LH
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLH 133

Query: 165 SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQ 221
           S  ++  ++K  N +L       L D G    +      + +  +R   +GTP +MAPE 
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI------TPEQSKRSTMVGTPYWMAPEV 187

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------IP 275
                R     + D W      IEM+ G  P                    P      I 
Sbjct: 188 VT---RKAYGPKVDIWSLGIMAIEMIEGEPPYL---------------NENPLRALYLIA 229

Query: 276 SGLPPAVENV----------LLGCFEYDLRSRPLMTDILR 305
           +   P ++N           L  C E D+  R    ++L+
Sbjct: 230 TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 51/292 (17%), Positives = 102/292 (34%), Gaps = 47/292 (16%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--KEDRMRVLLERL 95
                +     IGRG FG V+  T  L   D  +    AVK L+ +    +  + L E +
Sbjct: 22  PSSLIVHFNEVIGRGHFGCVYHGT--LLDNDGKK-IHCAVKSLNRITDIGEVSQFLTEGI 78

Query: 96  NDLFLKCQGV---EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLSNVF 150
                    V    GIC         G   +++ + +   GD    ++      ++ ++ 
Sbjct: 79  IMKDFSHPNVLSLLGIC-----LRSEGSPLVVLPYMKH--GDLRNFIRNETHNPTVKDLI 131

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPHLLLGI 200
            + + +A+G+  L SK           F+          L+E     + D G+   +   
Sbjct: 132 GFGLQVAKGMKYLASK----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMY-- 179

Query: 201 PLPSSDLPRRLGTPNYMAPEQW-QPE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
                +            P +W   E       + ++D W F   + E++T G  P    
Sbjct: 180 ---DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236

Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           +  +I   +++ + +   P   P  +  V+L C+      RP  ++++    
Sbjct: 237 NTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 29/221 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-C 102
           ++   +G G FG+V+ A +  +          A K++    E+ +   +  +    L  C
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGA------LAAAKVIETKSEEELEDYIVEIE--ILATC 73

Query: 103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQ 158
                I  L G    +GK+ I+++F   G+V   M       L+   +  V R  +   +
Sbjct: 74  DH-PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQML---E 128

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPN 215
            +  LHSK I+  +LK  N ++       L D G+             L +R   +GTP 
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN------LKTLQKRDSFIGTPY 182

Query: 216 YMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
           +MAPE    +     P  ++ D W    ++IEM     P  
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 56.6 bits (137), Expect = 8e-09
 Identities = 51/298 (17%), Positives = 102/298 (34%), Gaps = 59/298 (19%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           A   K + L+    +G G FG V         E       V +K++   ++        +
Sbjct: 7   ARIFKETELRKLKVLGSGVFGTVHKGV--WIPEGESIKIPVCIKVI---EDK----SGRQ 57

Query: 95  LNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK 143
                                  I  L G+      + ++ ++   GS+ D + +   G 
Sbjct: 58  SFQAVTD----HMLAIGSLDHAHIVRLLGL-CPGSSLQLVTQYLPLGSLLDHV-RQHRGA 111

Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 203
           L    +  + + +A+G+  L   G++  NL   N +L    +  + D G           
Sbjct: 112 LGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG----------- 160

Query: 204 SSDLPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-G 249
              +   L   +              MA E       G  + ++D W +  ++ E++T G
Sbjct: 161 ---VADLLPPDDKQLLYSEAKTPIKWMALESIH---FGKYTHQSDVWSYGVTVWELMTFG 214

Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
            +P  G  + E+ D + + + +   P      V  V++ C+  D   RP   ++   F
Sbjct: 215 AEPYAGLRLAEVPDLLEKGERLAQ-PQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 57.0 bits (138), Expect = 9e-09
 Identities = 59/287 (20%), Positives = 112/287 (39%), Gaps = 44/287 (15%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLE 93
            W +    LKL   IG+G FG+V L   Y          +VAVK +   K D   +  L 
Sbjct: 187 GWALNMKELKLLQTIGKGEFGDVMLGD-YRGN-------KVAVKCI---KNDATAQAFLA 235

Query: 94  RLNDL-FLKCQGV---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSN 148
             + +  L+   +    G+   +      G + I+ ++   GS+ D +       L    
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEK-----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
           + ++++D+ + +  L     +  +L   N +++E + A + D G              L 
Sbjct: 291 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--------------LT 336

Query: 209 RRLGTPNYMA--PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
           +   +       P +W  PE       S ++D W F   + E+ + G  P     + ++ 
Sbjct: 337 KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396

Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             V +  ++   P G PPAV +V+  C+  D  +RP    +    + 
Sbjct: 397 PRVEKGYKMDA-PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 51/272 (18%), Positives = 104/272 (38%), Gaps = 36/272 (13%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G +G+V       +          AVKIL      + +  L R+ +     +  E I
Sbjct: 13  LGEGSYGKVKEVLDSETLC------RRAVKIL-----KKKK--LRRIPNGEANVK-KE-I 57

Query: 109 CWLQGIS---------VING----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
             L+ +          V+      K+ ++M++    + + +  +   +  +     Y   
Sbjct: 58  QLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           L  G+  LHS+GI+  ++KP N +L       +  +G+   L              G+P 
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF-AADDTCRTSQGSPA 176

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           +  PE           F+ D W  +  +    + TG+ P  G ++ ++++ + +      
Sbjct: 177 FQPPEIANGL-DTFSGFKVDIW--SAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--YA 231

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           IP    P + ++L G  EY+   R  +  I +
Sbjct: 232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 56.6 bits (137), Expect = 1e-08
 Identities = 51/246 (20%), Positives = 89/246 (36%), Gaps = 42/246 (17%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            +   +G G  GEV LA    + +      +VA++I+        R              
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCK------KVAIRIISK------RKFAIGSAREADPAL 185

Query: 104 GVEG-ICWLQGIS---VI-------NGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNV 149
            VE  I  L+ ++   +I            I+++  EG  G   D++      +L  +  
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG--GELFDKVVGN--KRLKEATC 241

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV---LGDVGIPHLLLGIPLPSSD 206
             Y   +   +  LH  GI+  +LKP N +L+  +      + D G       I   +S 
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----HSKILGETSL 297

Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQP-RCGRSVDEIYD 263
           +    GTP Y+APE          +   D W  +  +I    L+G  P    R+   + D
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW--SLGVILFICLSGYPPFSEHRTQVSLKD 355

Query: 264 AVVRRQ 269
            +   +
Sbjct: 356 QITSGK 361

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 60/346 (17%), Positives = 113/346 (32%), Gaps = 98/346 (28%)

Query: 22  DHLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL 80
            + R  +  +    +     + ++    IG G FG V+ A         + +  VAVK+L
Sbjct: 27  MYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKML 85

Query: 81  HPVKEDRMRVLLERLNDLF--------LKCQGVEGICWLQGISVINGKICIIMKF----- 127
                  M+       D               +  +  L G+  +   +C++ ++     
Sbjct: 86  KEEASADMQ------ADFQREAALMAEFDNPNI--VK-LLGVCAVGKPMCLLFEYMAYGD 136

Query: 128 ------------------YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGIL 169
                              + S   R++      LS +     A  +A G+  L  +   
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193

Query: 170 VLNLKPFNFI---LNEADRAVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------- 216
                   F+   L  A R  L  VG  ++++ I    +D  L R + + +Y        
Sbjct: 194 -------KFVHRDL--ATRNCL--VG-ENMVVKI----ADFGLSRNIYSADYYKADGNDA 237

Query: 217 -----MAPEQWQPEVRGPISF-------ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
                M PE          S        E+D W +   + E+ + G+QP  G + +E+  
Sbjct: 238 IPIRWMPPE----------SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287

Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            V     +   P   P  + N++  C+      RP    I R+ + 
Sbjct: 288 YVRDGNILAC-PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 39/236 (16%), Positives = 75/236 (31%), Gaps = 52/236 (22%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV---LLERLND------LF 99
           +G G  G V     +       +   VAVK +     D   +   LL   +D       +
Sbjct: 23  LGYGSSGTVVFQGSF-------QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYY 75

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQ-----LKGGKLSLSNVFRYAI 154
                             +  + I ++    ++ D +                N      
Sbjct: 76  CSETT-------------DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEAD-------------RAVLGDVGI-PHLLLGI 200
            +A G+  LHS  I+  +LKP N +++ +              R ++ D G+   L  G 
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

Query: 201 PLPSSDLPRRLGTPNYMAPEQ----WQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
               ++L    GT  + APE        + +  ++   D +   C    +L+  + 
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 55/242 (22%), Positives = 85/242 (35%), Gaps = 37/242 (15%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-- 101
             +  IGRG    V    H  +        E AVKI+    E      LE + +   +  
Sbjct: 97  DPKDVIGRGVSSVVRRCVHRATGH------EFAVKIMEVTAERLSPEQLEEVREATRRET 150

Query: 102 --CQGVEG---ICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVF 150
              + V G   I  L      +  + ++        G   D +   +   LS     ++ 
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK--GELFDYL--TEKVALSEKETRSIM 206

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
           R    L + +  LH+  I+  +LKP N +L++  +  L D G          P   L   
Sbjct: 207 R---SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG----FSCHLEPGEKLREL 259

Query: 211 LGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAV 265
            GTP Y+APE       E       E D W  AC +I   +L G  P   R    +   +
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLW--ACGVILFTLLAGSPPFWHRRQILMLRMI 317

Query: 266 VR 267
           + 
Sbjct: 318 ME 319

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 60/325 (18%), Positives = 110/325 (33%), Gaps = 95/325 (29%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           W      L L   +G G FG+V +A    +  +   E   VAVK+L   K+D      + 
Sbjct: 76  WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML---KDDATE---KD 129

Query: 95  LNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKF---------------Y 128
           L+D  +     E            I  L G    +G + +I+++                
Sbjct: 130 LSD-LVS----EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184

Query: 129 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADR 185
                  + ++   +++  ++      LA+G+  L S+            I   L  A R
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----------KCIHRDL--AAR 232

Query: 186 AVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPI 230
            VL  V   + ++ I    +D  L R +   +Y             MAPE          
Sbjct: 233 NVL--VT-ENNVMKI----ADFGLARDINNIDYYKKTTNGRLPVKWMAPE---------- 275

Query: 231 SF-------ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
           +        ++D W F   + E+ T G  P  G  V+E++  +     +   P+     +
Sbjct: 276 ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTNEL 334

Query: 283 ENVLLGCFEYDLRSRPLMTDILRVF 307
             ++  C+      RP    ++   
Sbjct: 335 YMMMRDCWHAVPSQRPTFKQLVEDL 359

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 53/254 (20%), Positives = 81/254 (31%), Gaps = 70/254 (27%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVLLE------- 93
           +L   +G+G F  V      L+ +      E A  I+        D  ++  E       
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQ------EYAAMIINTKKLSARDHQKLEREARICRLL 67

Query: 94  ------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKL 144
                 RL+D                     G   +I     G  G   + +  +     
Sbjct: 68  KHPNIVRLHDSI------SE----------EGHHYLIFDLVTG--GELFEDI--VAREYY 107

Query: 145 SLSNVFRYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLL 197
           S       A    Q IL+     H  G++  NLKP N +L ++   A   L D G+   +
Sbjct: 108 SE----ADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163

Query: 198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPR 253
            G            GTP Y++     PEV  + P     D W  AC +I   +L G  P 
Sbjct: 164 EG---EQQAWFGFAGTPGYLS-----PEVLRKDPYGKPVDLW--ACGVILYILLVGYPPF 213

Query: 254 CGRSVDEIYDAVVR 267
                  +Y  +  
Sbjct: 214 WDEDQHRLYQQIKA 227

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 45/238 (18%), Positives = 82/238 (34%), Gaps = 45/238 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G  G+V    +   T++     + A+K+L    +D  +   E   +L  +      I
Sbjct: 70  LGLGINGKVLQIFN-KRTQE-----KFALKML----QDCPKARRE--VELHWRASQCPHI 117

Query: 109 CWLQGI----SVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFRYAIDLAQ 158
             +  +          + I+M+  +G  G    R+        +    S + +    + +
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDG--GELFSRIQDRGDQAFTEREASEIMK---SIGE 172

Query: 159 GILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGTPN 215
            I  LHS  I   ++KP N +  ++   A+L   D G            + L     TP 
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPY 228

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQP----RCGRSVDEIYDAVVR 267
           Y+APE   PE         D W  +  +I   +L G  P            +   +  
Sbjct: 229 YVAPEVLGPEKYDK---SCDMW--SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 66/292 (22%), Positives = 117/292 (40%), Gaps = 50/292 (17%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W +    LKL  R+G G FGEVW+          + + +VAVK L   K+  M      
Sbjct: 7   EWEVPRETLKLVERLGAGQFGEVWMGY-------YNGHTKVAVKSL---KQGSMSP---- 52

Query: 95  LNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLS 147
             D FL    +      + +  L  + V    I II ++ E GS+ D +    G KL+++
Sbjct: 53  --DAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
            +   A  +A+G+  +  +  +  +L+  N ++++     + D G              L
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG--------------L 155

Query: 208 PRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRS 257
            R +    Y A      P +W  PE    G  + ++D W F   + E++T G  P  G +
Sbjct: 156 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215

Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             E+   + R   +   P   P  +  ++  C++     RP    +  V + 
Sbjct: 216 NPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 55.8 bits (135), Expect = 2e-08
 Identities = 51/243 (20%), Positives = 88/243 (36%), Gaps = 42/243 (17%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
           +L   IG+GPF  V    +   T       + AVKI+                DL     
Sbjct: 27  ELCEVIGKGPFSVVRRCIN-RETG-----QQFAVKIVD--VAKFTSSPGLSTEDLKREAS 78

Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAID 155
                    I  L      +G + ++ +F +G        + +        S     A  
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDG--ADLCFEIVKRADAGFVYSE--AVASH 134

Query: 156 LAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLP 208
             + IL+     H   I+  ++KP   +L ++ + A +  G  G+   L           
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE---SGLVAG 191

Query: 209 RRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDA 264
            R+GTP++MA     PEV  R P     D W   C +I   +L+G  P  G   + +++ 
Sbjct: 192 GRVGTPHFMA-----PEVVKREPYGKPVDVW--GCGVILFILLSGCLPFYGTK-ERLFEG 243

Query: 265 VVR 267
           +++
Sbjct: 244 IIK 246

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 52/243 (21%), Positives = 80/243 (32%), Gaps = 38/243 (15%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-- 101
           + +  +GRG    V    H   T       E AVKI+             +         
Sbjct: 20  EPKEILGRGVSSVVRRCIH-KPTC-----KEYAVKIIDVTGGGSFSAEEVQELREATLKE 73

Query: 102 ---CQGVEG---ICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNV 149
               + V G   I  L+     N    ++    +   G   D +   +   LS      +
Sbjct: 74  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK--GELFDYL--TEKVTLSEKETRKI 129

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
            R    L + I  LH   I+  +LKP N +L++     L D G    L     P   L  
Sbjct: 130 MR---ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD----PGEKLRE 182

Query: 210 RLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDA 264
             GTP+Y+APE       +       E D W  +  +I   +L G  P   R    +   
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMW--STGVIMYTLLAGSPPFWHRKQMLMLRM 240

Query: 265 VVR 267
           ++ 
Sbjct: 241 IMS 243

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 50/233 (21%), Positives = 86/233 (36%), Gaps = 32/233 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLERLNDLFLKC 102
            L + IGRG +GEV +A    +          A K +     ED  R   E      +K 
Sbjct: 12  TLENTIGRGSWGEVKIAVQKGTRI------RRAAKKIPKYFVEDVDRFKQEIEI---MKS 62

Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAIDLAQG 159
                I  L      N  I ++M+   G  G   +R+  +       S+  R   D+   
Sbjct: 63  LDHPNIIRLYETFEDNTDIYLVMELCTG--GELFERV--VHKRVFRESDAARIMKDVLSA 118

Query: 160 ILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           +   H   +   +LKP NF+   ++  + L   D G+         P   +  ++GTP Y
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK----PGKMMRTKVGTPYY 174

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDAVVR 267
           ++P+     + G    E D W  +  ++   +L G  P    +  E+   +  
Sbjct: 175 VSPQV----LEGLYGPECDEW--SAGVMMYVLLCGYPPFSAPTDSEVMLKIRE 221

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 55/304 (18%), Positives = 104/304 (34%), Gaps = 71/304 (23%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--KEDRMRVLLERL 95
                +     IGRG FG V+  T  L   D  + H  AVK L+ +    +  + L E +
Sbjct: 86  PSSLIVHFNEVIGRGHFGCVYHGT--LLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGI 142

Query: 96  NDLFLKCQGV---EGICWLQGISVINGKICIIMKFYEGSVGDRMA--QLKGGKLSLSNVF 150
                    V    GIC         G   +++ + +   GD     + +    ++ ++ 
Sbjct: 143 IMKDFSHPNVLSLLGIC-----LRSEGSPLVVLPYMKH--GDLRNFIRNETHNPTVKDLI 195

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPHLLLGI 200
            + + +A+G+  L SK           F+          L+E     + D G        
Sbjct: 196 GFGLQVAKGMKFLASK----------KFVHRDLAARNCMLDEKFTVKVADFG-------- 237

Query: 201 PLPSSDLPRRLGTPNY---------------MAPEQWQPEVRGPISFETDSWGFACSIIE 245
                 L R +    +               MA E  Q       + ++D W F   + E
Sbjct: 238 ------LARDMYDKEFDSVHNKTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWE 288

Query: 246 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           ++T G  P    +  +I   +++ + +   P   P  +  V+L C+      RP  ++++
Sbjct: 289 LMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347

Query: 305 RVFK 308
               
Sbjct: 348 SRIS 351

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 47/239 (19%), Positives = 90/239 (37%), Gaps = 41/239 (17%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +++  IG G +       H  +        E AVKI+   K D      E   ++ L+  
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATNM------EFAVKIIDKSKRDPTE---E--IEILLRYG 73

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFRYAIDLA 157
               I  L+ +      + ++ +  +G  G   D++  L+    S    S V      + 
Sbjct: 74  QHPNIITLKDVYDDGKYVYVVTELMKG--GELLDKI--LRQKFFSEREASAVLF---TIT 126

Query: 158 QGILQLHSKGILVLNLKPFNFIL-NEADRAV---LGDVGIPHLLLGIPLPSSDLPRRLGT 213
           + +  LH++G++  +LKP N +  +E+       + D G       +   +  L     T
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYT 183

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQP---RCGRSVDEIYDAVVR 267
            N++APE  + +         D W  +  ++   MLTG  P       + +EI   +  
Sbjct: 184 ANFVAPEVLERQGYDA---ACDIW--SLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 48/279 (17%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLK 101
            L   +G G FG+V +  H L+       H+VAVKIL+   ++   +   ++R       
Sbjct: 14  VLGDTLGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKR------- 60

Query: 102 CQGVEGICWLQGIS---------VI--NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNV 149
               E I  L+            VI       ++M++   G + D +   K G++     
Sbjct: 61  ----E-IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEA 113

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
            R    +   +   H   ++  +LKP N +L+    A + D G    L  +      L  
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG----LSNMMSDGEFLRT 169

Query: 210 RLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVV 266
             G+PNY APE     +  GP   E D W  +C +I   +L G  P     V  ++  + 
Sbjct: 170 SCGSPNYAAPEVISGRLYAGP---EVDIW--SCGVILYALLCGTLPFDDEHVPTLFKKIR 224

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                  IP  L  +V  +L+   + D   R  + DI  
Sbjct: 225 GGV--FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 64/342 (18%), Positives = 117/342 (34%), Gaps = 91/342 (26%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           W      L L   +G G FG+V +A    +  +   E   VAVK+L   K+D      + 
Sbjct: 30  WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML---KDDATE---KD 83

Query: 95  LNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKF---------------Y 128
           L+D  +     E            I  L G    +G + +I+++                
Sbjct: 84  LSD-LVS----EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138

Query: 129 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADR 185
                  + ++   +++  ++      LA+G+  L S+            I   L  A R
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----------KCIHRDL--AAR 186

Query: 186 AVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPI 230
            VL  V   + ++ I    +D  L R +   +Y             MAPE          
Sbjct: 187 NVL--VT-ENNVMKI----ADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL---FDRVY 236

Query: 231 SFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGC 289
           + ++D W F   + E+ T G  P  G  V+E++  +     +   P+     +  ++  C
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTNELYMMMRDC 295

Query: 290 FEYDLRSRPLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTE 331
           +      RP    ++              RIL   ++  Y +
Sbjct: 296 WHAVPSQRPTFKQLVEDLD----------RILTLTTNEEYLD 327

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 58/292 (19%), Positives = 105/292 (35%), Gaps = 56/292 (19%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W +    LKL   IG+G FG+V L   Y          +VAVK +   K D        
Sbjct: 15  GWALNMKELKLLQTIGKGEFGDVMLGD-YRGN-------KVAVKCI---KNDATA----- 58

Query: 95  LNDLF--------LKCQGV---EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGG 142
                        L+   +    G+          G + I+ ++   GS+ D +      
Sbjct: 59  -QAFLAEASVMTQLRHSNLVQLLGVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
            L    + ++++D+ + +  L     +  +L   N +++E + A + D G          
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG---------- 162

Query: 203 PSSDLPRRLGTPNYMA--PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
               L +   +       P +W  PE       S ++D W F   + E+ + G  P    
Sbjct: 163 ----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218

Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
            + ++   V +  ++   P G PPAV  V+  C+  D   RP    +    +
Sbjct: 219 PLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 59/312 (18%), Positives = 102/312 (32%), Gaps = 83/312 (26%)

Query: 36  AW-IKPSALKLRHR-IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
              +    L L  + +G G FG V    + +          VAVKIL   K +       
Sbjct: 10  EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKT----VAVKIL---KNEAND---P 59

Query: 94  RLNDLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGG 142
            L D  L     E           I  + GI        ++M+  E   G     L +  
Sbjct: 60  ALKDELLA----EANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAEL--GPLNKYLQQNR 112

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVG 192
            +   N+      ++ G+  L             NF+          L     A + D G
Sbjct: 113 HVKDKNIIELVHQVSMGMKYLEES----------NFVHRDLAARNVLLVTQHYAKISDFG 162

Query: 193 IPHLLLGIPLPSSDLPRRLGTPN--YMA------PEQWQ-PEVRGPISF-----ETDSWG 238
                         L + L      Y A      P +W  PE    I++     ++D W 
Sbjct: 163 --------------LSKALRADENYYKAQTHGKWPVKWYAPEC---INYYKFSSKSDVWS 205

Query: 239 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
           F   + E  + G +P  G    E+   + + + +   P+G P  + +++  C+ YD+ +R
Sbjct: 206 FGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-PAGCPREMYDLMNLCWTYDVENR 264

Query: 298 PLMTDILRVFKS 309
           P    +    ++
Sbjct: 265 PGFAAVELRLRN 276

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 67/301 (22%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
            + + L     +G G FG V    + +  +  D    VA+K+L    E           +
Sbjct: 333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQID----VAIKVLKQGTEKADT-------E 381

Query: 98  LFLKCQGVEG------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
             ++   +        I  L G+      + ++M+    G +   +   K  ++ +SNV 
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVA 439

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPHLLLGI 200
                ++ G+  L  K          NF+          L     A + D G        
Sbjct: 440 ELLHQVSMGMKYLEEK----------NFVHRNLAARNVLLVNRHYAKISDFG-------- 481

Query: 201 PLPSSDLPRRLGTPN--YMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT- 248
                 L + LG  +  Y A      P +W  PE       S  +D W +  ++ E L+ 
Sbjct: 482 ------LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 535

Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           G +P       E+   + + + +   P   PP +  ++  C+ Y    RP    + +  +
Sbjct: 536 GQKPYKKMKGPEVMAFIEQGKRMEC-PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594

Query: 309 S 309
           +
Sbjct: 595 A 595

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 53.8 bits (130), Expect = 6e-08
 Identities = 50/237 (21%), Positives = 78/237 (32%), Gaps = 43/237 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G F       H   +         AVKI+      RM    ++       C+G   I
Sbjct: 19  LGEGSFSICRKCVH-KKSN-----QAFAVKII----SKRMEANTQKEITALKLCEGHPNI 68

Query: 109 CWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFRYAIDLAQGILQ 162
             L  +        ++M+   G  G   +R+   K    S    S + R    L   +  
Sbjct: 69  VKLHEVFHDQLHTFLVMELLNG--GELFERI--KKKKHFSETEASYIMR---KLVSAVSH 121

Query: 163 LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +H  G++  +LKP N +  +E D   +   D G        P  +  L     T +Y AP
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG---FARLKPPDNQPLKTPCFTLHYAAP 178

Query: 220 EQWQPEVRGPISFETDSWGFACSIIE--MLTGVQP-------RCGRSVDEIYDAVVR 267
           E              D W  +  +I   ML+G  P           S  EI   + +
Sbjct: 179 ELLNQNGYDE---SCDLW--SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 53.8 bits (130), Expect = 7e-08
 Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 35/230 (15%)

Query: 32  NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-- 89
           +    W      +L  ++GRG + EV+ A +  + E      +V VKIL PVK+ +++  
Sbjct: 27  SHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE------KVVVKILKPVKKKKIKRE 80

Query: 90  -VLLERLNDLFLKCQGVEGICWLQGI--SVINGKICIIMKFYEGSVGDRMAQLKGGKLSL 146
             +LE L       +G   I  L  I    ++    ++ +    +   ++ Q     L+ 
Sbjct: 81  IKILENL-------RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTD 129

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSS 205
            ++  Y  ++ + +   HS GI+  ++KP N +++   R + L D G    L     P  
Sbjct: 130 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG----LAEFYHPGQ 185

Query: 206 DLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
           +   R+ +  +  PE    +Q        +  D W   C +  M+   +P
Sbjct: 186 EYNVRVASRYFKGPELLVDYQ-----MYDYSLDMWSLGCMLASMIFRKEP 230

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 53.4 bits (129), Expect = 7e-08
 Identities = 55/313 (17%), Positives = 105/313 (33%), Gaps = 83/313 (26%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  + L L   +G G FG V         ++     +VAVK +   K D        + +
Sbjct: 31  IDRNLLILGKILGEGEFGSVMEGN---LKQEDGTSLKVAVKTM---KLDNSS--QREIEE 82

Query: 98  LF--------LKCQGV---EGICWLQGISVINGKICIIMKFYEGSVGD-------RMAQL 139
                          V    G+C ++  S    K  +I+ F +   GD          + 
Sbjct: 83  FLSEAACMKDFSHPNVIRLLGVC-IEMSSQGIPKPMVILPFMKY--GDLHTYLLYSRLET 139

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAV-L 188
               + L  + ++ +D+A G+  L ++          NF+          L + D  V +
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNR----------NFLHRDLAARNCMLRD-DMTVCV 188

Query: 189 GDVGIPHLLLGIPLPSSDLPRRLGTPNY-------------MAPEQWQPEVRGPISFETD 235
            D G              L +++ + +Y             +A E          + ++D
Sbjct: 189 ADFG--------------LSKKIYSGDYYRQGRIAKMPVKWIAIESLA---DRVYTSKSD 231

Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
            W F  ++ E+ T G+ P  G    E+YD ++    +   P      +  ++  C+  D 
Sbjct: 232 VWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ-PEDCLDELYEIMYSCWRTDP 290

Query: 295 RSRPLMTDILRVF 307
             RP  + +    
Sbjct: 291 LDRPTFSVLRLQL 303

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 53.9 bits (130), Expect = 8e-08
 Identities = 53/252 (21%), Positives = 85/252 (33%), Gaps = 67/252 (26%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLE------- 93
            ++  +G+G F  V    H  +T       E A KI++  K    D  ++  E       
Sbjct: 32  DVKEELGKGAFSVVRRCVH-KTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKL 85

Query: 94  ------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKL 144
                 RL+D        +                ++     G  G   + +      + 
Sbjct: 86  QHPNIVRLHDSI------QE----------ESFHYLVFDLVTG--GELFEDIVA----RE 123

Query: 145 SLSNVFRYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLL 197
             S     A    Q IL+     HS GI+  NLKP N +L ++A  A +   D G+   +
Sbjct: 124 FYSE--ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181

Query: 198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCG 255
                 S       GTP Y++PE  + +         D W  AC +I   +L G  P   
Sbjct: 182 N----DSEAWHGFAGTPGYLSPEVLKKDPYSK---PVDIW--ACGVILYILLVGYPPFWD 232

Query: 256 RSVDEIYDAVVR 267
                +Y  +  
Sbjct: 233 EDQHRLYAQIKA 244

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 32/219 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-C 102
            +  ++G G +G V+ A H  + +       VA+K + PV+ D   ++ E      ++ C
Sbjct: 32  DVLEKLGEGSYGSVYKAIHKETGQ------IVAIKQV-PVESDLQEIIKEIS---IMQQC 81

Query: 103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQ 158
                +    G    N  + I+M++   GSV D + +L+   L+   ++ + +      +
Sbjct: 82  DS-PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQ---STLK 136

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPN 215
           G+  LH    +  ++K  N +LN    A L D G+   L      +  + +R   +GTP 
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL------TDTMAKRNTVIGTPF 190

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
           +MAPE  Q       +   D W    + IEM  G  P  
Sbjct: 191 WMAPEVIQ---EIGYNCVADIWSLGITAIEMAEGKPPYA 226

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 60/327 (18%), Positives = 116/327 (35%), Gaps = 69/327 (21%)

Query: 23  HLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH 81
            + +    + + +    +   LK    +G G FG+V L  +    ++  E  +VAVK L 
Sbjct: 2   DIVSEKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLK 59

Query: 82  PVKEDRMRV-------LLERLNDLFLKCQGVEGICWLQGISVINGK--ICIIMKFYE-GS 131
           P               +L  L          E I   +GI   +G   I +IM+F   GS
Sbjct: 60  PESGGNHIADLKKEIEILRNLYH--------ENIVKYKGICTEDGGNGIKLIMEFLPSGS 111

Query: 132 VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILN 181
           + + +      K++L    +YA+ + +G+  L S+           +LV +       + 
Sbjct: 112 LKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES----EHQVK 166

Query: 182 EAD----RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
             D    +A+  D     +         D P       + APE      +      +D W
Sbjct: 167 IGDFGLTKAIETDKEYYTVKDD-----RDSPVF-----WYAPECLM---QSKFYIASDVW 213

Query: 238 GFACSIIEMLT---------------GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
            F  ++ E+LT                       +V  + + +   + +P  P   P  V
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-PPNCPDEV 272

Query: 283 ENVLLGCFEYDLRSRPLMTDILRVFKS 309
             ++  C+E+   +R    +++  F++
Sbjct: 273 YQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 70/276 (25%), Positives = 108/276 (39%), Gaps = 52/276 (18%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--LERLNDLFLKCQGVE 106
           +G G FG+V +  H L+       H+VAVKIL+  K   + V+  + R           E
Sbjct: 24  LGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRR-----------E 66

Query: 107 GICWLQGIS---------VI--NGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRY 152
            I  L+            VI     I ++M++  G  G   D +   K G+L      R 
Sbjct: 67  -IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG--GELFDYIC--KNGRLDEKESRRL 121

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
              +  G+   H   ++  +LKP N +L+    A + D G    L  +      L    G
Sbjct: 122 FQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG----LSNMMSDGEFLRTSCG 177

Query: 213 TPNYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQ 269
           +PNY APE     +  GP   E D W  +  +I   +L G  P     V  ++  +    
Sbjct: 178 SPNYAAPEVISGRLYAGP---EVDIW--SSGVILYALLCGTLPFDDDHVPTLFKKICD-- 230

Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            I   P  L P+V ++L    + D   R  + DI  
Sbjct: 231 GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 56/304 (18%), Positives = 102/304 (33%), Gaps = 59/304 (19%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
            +   LK   ++G+G FG V L          +    VAVK L     D+ R     +  
Sbjct: 20  FEERHLKYISQLGKGNFGSVELCR--YDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77

Query: 98  L-FLKCQGVEGICWLQGISVINGK--ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
           L  L     + I   +G+S   G+  + ++M++   G + D + Q    +L  S +  Y+
Sbjct: 78  LKALHS---DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYS 133

Query: 154 IDLAQGILQLHSKG----------ILVLNLKPFNFILNEADRAVLGDVGIPHLLLG---- 199
             + +G+  L S+           ILV                 + D G+  LL      
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILV----------ESEAHVKIADFGLAKLLPLDKDY 183

Query: 200 -IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR- 256
            +       P       + APE          S ++D W F   + E+ T   +      
Sbjct: 184 YVVREPGQSPIF-----WYAPESLS---DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA 235

Query: 257 -------------SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
                        ++  + + +   Q +P  P   P  V  ++  C+    + RP  + +
Sbjct: 236 EFLRMMGCERDVPALSRLLELLEEGQRLPA-PPACPAEVHELMKLCWAPSPQDRPSFSAL 294

Query: 304 LRVF 307
               
Sbjct: 295 GPQL 298

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 35/225 (15%)

Query: 46  RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-EDRMRVLLERLNDLFLKCQG 104
              +G G    V    + L T       E AVKI+       R RV  E   ++  +CQG
Sbjct: 18  EDVLGEGAHARVQTCIN-LITSQ-----EYAVKIIEKQPGHIRSRVFREV--EMLYQCQG 69

Query: 105 VEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFRYAIDLAQ 158
              +  L        +  ++ +   G  G     +   K    +    S V +   D+A 
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRG--GSILSHI--HKRRHFNELEASVVVQ---DVAS 122

Query: 159 GILQLHSKGILVLNLKPFNFIL-NEADRAVL--GD----VGIPHLLLGIPLPSSDLPRRL 211
            +  LH+KGI   +LKP N +  +    + +   D     GI       P+ + +L    
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182

Query: 212 GTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIE--MLTGVQP 252
           G+  YMAPE  +   E         D W  +  +I   +L+G  P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLW--SLGVILYILLSGYPP 225

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 34/220 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-----LLERLNDLFLKCQ 103
           +G G F  VWLA      +D      VA+KI+   K           LL+R+ND     +
Sbjct: 27  LGWGHFSTVWLA------KDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80

Query: 104 GVEG----ICWLQGISVINGK---ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
              G    +  L   +        + ++ +    ++   + + +   + L  V + +  L
Sbjct: 81  DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140

Query: 157 AQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG--- 212
             G+  +H + GI+  ++KP N +L E   +    + I    LG    +           
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPEN-VLMEIVDSPENLIQIKIADLGN---ACWYDEHYTNSI 196

Query: 213 -TPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTG 249
            T  Y +     PEV    P     D W  AC I E++TG
Sbjct: 197 QTREYRS-----PEVLLGAPWGCGADIWSTACLIFELITG 231

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 57/309 (18%), Positives = 106/309 (34%), Gaps = 82/309 (26%)

Query: 38  IKPSALKL-RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
           +K   L +    +G G FG V    + +  +  D    VA+K+L    E           
Sbjct: 6   LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID----VAIKVLKQGTEKADT------- 54

Query: 97  DLFLKCQGVEG----------ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLS 145
           +  ++    E           I  L G+      + ++M+    G +   +   K  ++ 
Sbjct: 55  EEMMR----EAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFL-VGKREEIP 108

Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPH 195
           +SNV      ++ G+  L  K          NF+          L     A + D G   
Sbjct: 109 VSNVAELLHQVSMGMKYLEEK----------NFVHRDLAARNVLLVNRHYAKISDFG--- 155

Query: 196 LLLGIPLPSSDLPRRLGTPN--YMA------PEQWQ-PEVRGPISF-----ETDSWGFAC 241
                      L + LG  +  Y A      P +W  PE    I+F      +D W +  
Sbjct: 156 -----------LSKALGADDSYYTARSAGKWPLKWYAPEC---INFRKFSSRSDVWSYGV 201

Query: 242 SIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 300
           ++ E L+ G +P       E+   + + + +   P   PP +  ++  C+ Y    RP  
Sbjct: 202 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC-PPECPPELYALMSDCWIYKWEDRPDF 260

Query: 301 TDILRVFKS 309
             + +  ++
Sbjct: 261 LTVEQRMRA 269

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 51.4 bits (124), Expect = 3e-07
 Identities = 50/251 (19%), Positives = 83/251 (33%), Gaps = 65/251 (25%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVLLE------- 93
            ++  +G+G F  V    H  +T       E A KI+        D  ++  E       
Sbjct: 9   DVKEELGKGAFSVVRRCVH-KTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKL 62

Query: 94  ------RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKL 144
                 RL+D        +                ++     G  G   + +        
Sbjct: 63  QHPNIVRLHDSI------QE----------ESFHYLVFDLVTG--GELFEDIVAR--EFY 102

Query: 145 S---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLL 198
           S    S+  +    + + I   HS GI+  NLKP N +L ++A  A +   D G+   + 
Sbjct: 103 SEADASHCIQ---QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159

Query: 199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGR 256
                S       GTP Y++PE  + +         D W  AC +I   +L G  P    
Sbjct: 160 ----DSEAWHGFAGTPGYLSPEVLKKDPYSK---PVDIW--ACGVILYILLVGYPPFWDE 210

Query: 257 SVDEIYDAVVR 267
               +Y  +  
Sbjct: 211 DQHRLYAQIKA 221

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 52.0 bits (125), Expect = 3e-07
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKI------LHPVKEDRMRVLLERL 95
           KL+    R   G ++ A    +          + ++K+      L   +    R      
Sbjct: 45  KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQ 104

Query: 96  NDLFLKCQGVE--GICWLQGISVINGKI-CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRY 152
            + + K        I    G  V   K   +++     S+   +       LS  +V + 
Sbjct: 105 VNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQV 164

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           A  L   +  LH    +  N+   N  ++  D++ +
Sbjct: 165 ACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQV 200

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 65/319 (20%), Positives = 109/319 (34%), Gaps = 81/319 (25%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLAT-HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           W +    L L   +G G FG+V LA    L  +  +   +VAVK+L   K D      + 
Sbjct: 64  WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATE---KD 117

Query: 95  LNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKF---------------Y 128
           L+D  +     E            I  L G    +G + +I+++                
Sbjct: 118 LSD-LIS----EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172

Query: 129 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADR 185
                   +     +LS  ++   A  +A+G+  L SK            I   L  A R
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK----------KCIHRDL--AAR 220

Query: 186 AVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPI 230
            VL  V     ++ I    +D  L R +   +Y             MAPE          
Sbjct: 221 NVL--VT-EDNVMKI----ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL---FDRIY 270

Query: 231 SFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGC 289
           + ++D W F   + E+ T G  P  G  V+E++  +     +   PS     +  ++  C
Sbjct: 271 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDC 329

Query: 290 FEYDLRSRPLMTDILRVFK 308
           +      RP    ++    
Sbjct: 330 WHAVPSQRPTFKQLVEDLD 348

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 51.1 bits (123), Expect = 4e-07
 Identities = 52/247 (21%), Positives = 89/247 (36%), Gaps = 48/247 (19%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            +   +G G  GEV LA    + +      +VA+KI+        R              
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCK------KVAIKIISK------RKFAIGSAREADPAL 60

Query: 104 GVEG-ICWLQGIS---VIN-------GKICIIMKFYEGSVG---DRMAQLKGGKLS---L 146
            VE  I  L+ ++   +I            I+++  EG  G   D++      +L     
Sbjct: 61  NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG--GELFDKVVG--NKRLKEATC 116

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 203
              F     +   +  LH  GI+  +LKP N +L ++ +  ++   D G       I   
Sbjct: 117 KLYFY---QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----HSKILGE 169

Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQP-RCGRSVDE 260
           +S +    GTP Y+APE          +   D W  +  +I    L+G  P    R+   
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW--SLGVILFICLSGYPPFSEHRTQVS 227

Query: 261 IYDAVVR 267
           + D +  
Sbjct: 228 LKDQITS 234

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 56/310 (18%), Positives = 109/310 (35%), Gaps = 68/310 (21%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV------- 90
                LK    +G G FG+V L  +  + +   E   VAVK L      + R        
Sbjct: 28  FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADAGPQHRSGWKQEID 85

Query: 91  LLERLNDLFLKCQGVEGICWLQGISVINGK--ICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
           +L  L          E I   +G     G   + ++M++     G     L    + L+ 
Sbjct: 86  ILRTLYH--------EHIIKYKGCCEDAGAASLQLVMEYVPL--GSLRDYLPRHSIGLAQ 135

Query: 149 VFRYAIDLAQGILQLHSKG----------ILVLNLKPFNFILNEAD----RAVLGDVGIP 194
           +  +A  + +G+  LH++           +L+ N    + ++   D    +AV       
Sbjct: 136 LLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN----DRLVKIGDFGLAKAVPEGHEYY 191

Query: 195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT------ 248
            +         D P       + APE  +        + +D W F  ++ E+LT      
Sbjct: 192 RVRED-----GDSPVF-----WYAPECLK---EYKFYYASDVWSFGVTLYELLTHCDSSQ 238

Query: 249 ---------GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
                        +   +V  + + + R + +P  P   P  V +++  C+E +   RP 
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPR-PDKCPAEVYHLMKNCWETEASFRPT 297

Query: 300 MTDILRVFKS 309
             +++ + K+
Sbjct: 298 FENLIPILKT 307

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 50.3 bits (121), Expect = 7e-07
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 52/243 (21%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH---PVKEDRMR---VLLERLND 97
                +G G F EV+L    L+ +        A+K +      ++  +     +L+++  
Sbjct: 12  IFMEVLGSGAFSEVFLVKQRLTGK------LFALKCIKKSPAFRDSSLENEIAVLKKIKH 65

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVG---DRMAQLKGGKLS---LSNVFR 151
                   E I  L+ I        ++M+   G  G   DR+ +   G  +    S V +
Sbjct: 66  --------ENIVTLEDIYESTTHYYLVMQLVSG--GELFDRILER--GVYTEKDASLVIQ 113

Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLLLGIPLPSSDLP 208
               +   +  LH  GI+  +LKP N +     + +  ++ D G     L     +  + 
Sbjct: 114 ---QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG-----LSKMEQNGIMS 165

Query: 209 RRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEIYDA 264
              GTP Y+A     PEV  + P S   D W  +  +I   +L G  P    +  ++++ 
Sbjct: 166 TACGTPGYVA-----PEVLAQKPYSKAVDCW--SIGVITYILLCGYPPFYEETESKLFEK 218

Query: 265 VVR 267
           +  
Sbjct: 219 IKE 221

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 61/328 (18%), Positives = 107/328 (32%), Gaps = 92/328 (28%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W      L L   +G G FG+V  AT     +    Y  VAVK+L   KE+        L
Sbjct: 18  WEFPRKNLVLGKTLGEGEFGKVVKAT-AFHLKGRAGYTTVAVKML---KENASP---SEL 70

Query: 96  NDLF-----LKCQGVEGICWLQGISVINGKICIIMKF----------------------- 127
            DL      LK      +  L G    +G + +I+++                       
Sbjct: 71  RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130

Query: 128 YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEAD 184
                   +       L++ ++  +A  ++QG+  L               +   L  A 
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----------KLVHRDL--AA 178

Query: 185 RAVLGDVGIPHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGP 229
           R +L  V      + I    SD  L R +   +              MA E         
Sbjct: 179 RNIL--VA-EGRKMKI----SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE--------- 222

Query: 230 ISF-------ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
            S        ++D W F   + E++T G  P  G   + +++ +     +   P      
Sbjct: 223 -SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER-PDNCSEE 280

Query: 282 VENVLLGCFEYDLRSRPLMTDILRVFKS 309
           +  ++L C++ +   RP+  DI +  + 
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADISKDLEK 308

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 46/280 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L   +G G +GEV LA + ++ E       VAVKI+   +       +++         
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKK--------- 54

Query: 104 GVEGICWLQGIS---------VI--NGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNV 149
             E IC  + ++                  + +++  G  G   DR+       +   + 
Sbjct: 55  --E-ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIE--PDIGMPEPDA 107

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
            R+   L  G++ LH  GI   ++KP N +L+E D   + D G+  +          L +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNK 166

Query: 210 RLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQP-RCGRSVDEIYDAV 265
             GT  Y+APE  +            D W  +C I+   ML G  P        + Y   
Sbjct: 167 MCGTLPYVAPELLKRREFHAE---PVDVW--SCGIVLTAMLAGELPWDQPSDSCQEYSDW 221

Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
             ++        +  A   +L      +  +R  + DI +
Sbjct: 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 23/158 (14%), Positives = 56/158 (35%), Gaps = 15/158 (9%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKEDRMRVL------LER 94
           K+   IG+G FG ++LA    S+E         VK+    +      ++         + 
Sbjct: 38  KVGLPIGQGGFGCIYLADM-NSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQI 96

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKI----CIIMKFYEGSVGDRMAQLKGGKLSLSNVF 150
              +  +     G+    G  + +        +IM  +   +   + +    + S   V 
Sbjct: 97  QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQK-IYEANAKRFSRKTVL 155

Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
           + ++ +   +  +H    +  ++K  N +LN  +   +
Sbjct: 156 QLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 3e-06
 Identities = 68/532 (12%), Positives = 136/532 (25%), Gaps = 185/532 (34%)

Query: 64  LSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLKCQG------VEGIC-----WL 111
           LS E+ D        I+           L        L  Q       VE +      +L
Sbjct: 46  LSKEEIDH-------IIMSKDAVSGTLRLF----WTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 112 -QGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRY--AIDLAQGILQLHS--- 165
              I     +  ++ + Y     DR+        +  NV R    + L Q +L+L     
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQR-DRLYN-DNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 166 ----------KGILVLNLKPFNFILNEADRAV----LGDVGIPHLLL------------- 198
                     K  + L++     +  + D  +    L +   P  +L             
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 199 ---------GIPLPSSDLPRRLGTPNYMAPEQ-----------WQPEVRGPISFETDSWG 238
                     I L    +   L     +  +               +         +++ 
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAEL--RRLLKSKPYENCLLVLLNVQNAKA-------WNAFN 263

Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL-PPAVENVL---LGCFEYDL 294
            +C I+ + T    R  +  D +  A      +      L P  V+++L   L C   DL
Sbjct: 264 LSCKIL-LTT----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 295 RSR-----PLMTDILRVFKSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRK 349
                   P    I+     DG                 +  W    + +  D +    +
Sbjct: 319 PREVLTTNPRRLSIIAESIRDG----------LAT----WDNW----KHVNCDKLTTIIE 360

Query: 350 ------PPNSFK---------PENMDVPEGRVVGV---EHNTEGESFVL----------- 380
                  P  ++         P +  +P   ++ +   +        V+           
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTI-LLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 381 ------VRVHGIHDPLRVHVS---ALERVTFGLAAGDWVRLKEEDR--RHSPVGILHSIQ 429
                 + +  I+  L+V +    AL R            + +     +      L    
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHR-----------SIVDHYNIPKTFDSDDLIPPY 468

Query: 430 RDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKR 481
            D       +G       H   ++  E      F  +  +     F +  ++
Sbjct: 469 LDQYFY-SHIGH------HLKNIEHPERM--TLFRMVFLD-----FRFLEQK 506

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 57/370 (15%), Positives = 107/370 (28%), Gaps = 123/370 (33%)

Query: 152 YAIDLAQGILQLHSKGILVLNLKPF--NFILN---EADRAVLGD------VGIPH----- 195
           + +D   G  Q   K IL +    F  NF      +  +++L        +         
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 196 -LLLGIPL--PSSDLPRRLGT---PNY--MAPEQWQPEVRGPISFETDSWGFACSIIEML 247
             L    L      + + +      NY  +     + E R P S  T    +      + 
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQP-SMMTRM--YIEQRDRLY 120

Query: 248 TGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL---PPAVENVLL-G-------------CF 290
              Q     +       V R Q    +   L    PA +NVL+ G             C 
Sbjct: 121 NDNQVFAKYN-------VSRLQPYLKLRQALLELRPA-KNVLIDGVLGSGKTWVALDVCL 172

Query: 291 EYDLRSRPLMTDILRVFKSDGGWTGHGSRILPD------------------KSSSGYTEW 332
            Y ++ +  M    ++F     W    +   P+                    S   +  
Sbjct: 173 SYKVQCK--MDF--KIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 333 FLSKEDLK--VDDVVRSRKPPNSFKPENM---DVPEGRVVGVEHNTEGESF-----VLV- 381
            L    ++  +  +++S+   N      +   +V   +           +F     +L+ 
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL----LVLLNVQNAKAW--------NAFNLSCKILLT 271

Query: 382 -RVHGIHDPL----RVHVSALERVTFGLAAGD-------WV-----RLKEEDRRHSP--V 422
            R   + D L      H+S L+  +  L   +       ++      L  E    +P  +
Sbjct: 272 TRFKQVTDFLSAATTTHIS-LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 423 GILHSIQRDG 432
            I+    RDG
Sbjct: 331 SIIAESIRDG 340

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 64/333 (19%), Positives = 109/333 (32%), Gaps = 91/333 (27%)

Query: 23  HLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH 81
           H        + T    +  + +K +  IG G FG+V  A      +      + A+K + 
Sbjct: 6   HHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKAR----IKKDGLRMDAAIKRM- 60

Query: 82  PVKEDRMRVLLERLNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKF--- 127
             KE   +   +   D F      E            I  L G     G + + +++   
Sbjct: 61  --KEYASK---DDHRD-FAG----ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110

Query: 128 ------------YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKP 175
                        E      +A      LS   +  +A D+A+G+  L  K         
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--------- 161

Query: 176 FNFI---LNEADRAVLGDVGIPHLLLGIPLPSSD-----------------LPRRLGTPN 215
             FI   L  A R +L  VG  + +  I    +D                 LP R     
Sbjct: 162 -QFIHRDL--AARNIL--VG-ENYVAKI----ADFGLSRGQEVYVKKTMGRLPVR----- 206

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
           +MA E     V    +  +D W +   + E+++ G  P CG +  E+Y+ + +   +   
Sbjct: 207 WMAIESLNYSV---YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK- 262

Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
           P      V +++  C+      RP    IL   
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 46/280 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L   +G G +GEV LA + ++ E       VAVKI+   +       +++         
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKK--------- 54

Query: 104 GVEGICWLQGIS---------VI--NGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNV 149
             E IC  + ++                  + +++  G  G   DR+       +   + 
Sbjct: 55  --E-ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIE--PDIGMPEPDA 107

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR 209
            R+   L  G++ LH  GI   ++KP N +L+E D   + D G+  +          L +
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-RERLLNK 166

Query: 210 RLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQP-RCGRSVDEIYDAV 265
             GT  Y+APE  +            D W  +C I+   ML G  P        + Y   
Sbjct: 167 MCGTLPYVAPELLKRREFHAE---PVDVW--SCGIVLTAMLAGELPWDQPSDSCQEYSDW 221

Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
             ++        +  A   +L      +  +R  + DI +
Sbjct: 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 49/299 (16%), Positives = 98/299 (32%), Gaps = 71/299 (23%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLERLNDL-FL 100
                 IG+G FG V+   +    +      + A+K L  + E +     L     +  L
Sbjct: 23  THSDRVIGKGHFGVVYHGEYIDQAQ---NRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79

Query: 101 KCQGV---EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAID 155
               V    GI          G   +++ +     GD +  ++      ++ ++  + + 
Sbjct: 80  NHPNVLALIGIMLPP-----EGLPHVLLPYMCH--GDLLQFIRSPQRNPTVKDLISFGLQ 132

Query: 156 LAQGILQLHSKGILVLNLKPFNFI----------LNEADRAVLGDVGIPHLLLGIPLPSS 205
           +A+G+  L  +           F+          L+E+    + D G             
Sbjct: 133 VARGMEYLAEQ----------KFVHRDLAARNCMLDESFTVKVADFG------------- 169

Query: 206 DLPRRLGTPNY---------------MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-G 249
            L R +    Y                A E  Q       + ++D W F   + E+LT G
Sbjct: 170 -LARDILDREYYSVQQHRHARLPVKWTALESLQ---TYRFTTKSDVWSFGVLLWELLTRG 225

Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
             P       ++   + + + +P  P   P ++  V+  C+E D   RP    ++   +
Sbjct: 226 APPYRHIDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 67/312 (21%), Positives = 106/312 (33%), Gaps = 66/312 (21%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLER 94
           W    + L     +G G FG+V  AT        D    VAVK+L P      R  L+  
Sbjct: 18  WEFPRNRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76

Query: 95  LNDLFLKCQGV-EGICWLQGISVINGKICIIM-----------------KFYEGSVGDRM 136
           L    L   G    I  L G   I G   +I                   F        +
Sbjct: 77  LK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134

Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVGI 193
            +     L L ++  ++  +A+G+  L SK          N I   L  A R +L  +  
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLASK----------NCIHRDL--AARNIL--LT- 179

Query: 194 PHLLLGIPLPSSD--LPRRLGTPNY-------------MAPEQWQPEVRGPISFETDSWG 238
              +  I     D  L R +   +              MAPE          +FE+D W 
Sbjct: 180 HGRITKI----CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF---NCVYTFESDVWS 232

Query: 239 FACSIIEMLT-GVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
           +   + E+ + G  P  G  VD + Y  +     +   P   P  + +++  C++ D   
Sbjct: 233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS-PEHAPAEMYDIMKTCWDADPLK 291

Query: 297 RPLMTDILRVFK 308
           RP    I+++ +
Sbjct: 292 RPTFKQIVQLIE 303

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 47/273 (17%), Positives = 82/273 (30%), Gaps = 62/273 (22%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--------HPVKEDRMRVLLERL 95
            +  ++G G F  VWL+       D      VA+K++          + E R+   L+ +
Sbjct: 40  HVIRKLGWGHFSTVWLS------WDIQGKKFVAMKVVKSAEHYTETALDEIRL---LKSV 90

Query: 96  NDLFLKCQGVEGICWLQG---ISVINGK-ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
            +        E +  L     IS +NG  IC++ +     +   + +     L L  V +
Sbjct: 91  RNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK 150

Query: 152 YAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 210
               + QG+  LH+K  I+  ++KP N +L+  ++ +               P       
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210

Query: 211 LGTPNYMAPEQWQ--------------------------------------PEVR--GPI 230
              P                                                EV      
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270

Query: 231 SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 263
           +   D W  AC   E+ TG       S +E   
Sbjct: 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTR 303

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 26/159 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L  +IG G FG ++LA      E    +    VK+     E +    L      + +  
Sbjct: 40  VLGKKIGSGGFGLIYLAFPTNKPEKDARH---VVKV-----EYQENGPLFSELKFYQRVA 91

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDR--------MAQL---------KGGKLSL 146
             + I        ++  + I + +  G    +        M +L         + G    
Sbjct: 92  KKDCIKKWIERKQLD-YLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKK 150

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 185
           S V +  I +   +  +H    +  ++K  N +L   + 
Sbjct: 151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP 189

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 60/247 (24%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           ++   +GRG    V+      + +        A+K+L     D+  V  E          
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQK------PYALKVL-KKTVDKKIVRTE---------- 98

Query: 104 GVEGICWLQGISVIN-----------GKICIIMKFYEGSVG---DRMAQLKGGKLS---L 146
               I  L  +S  N            +I ++++   G  G   DR+ +   G  S    
Sbjct: 99  ----IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG--GELFDRIVEK--GYYSERDA 150

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLLLGIPLP 203
           ++  +    + + +  LH  GI+  +LKP N +    A  A   + D G+  ++      
Sbjct: 151 ADAVK---QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE----H 203

Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD-E 260
              +    GTP Y APE  +         E D W  +  II   +L G +P      D  
Sbjct: 204 QVLMKTVCGTPGYCAPEILR---GCAYGPEVDMW--SVGIITYILLCGFEPFYDERGDQF 258

Query: 261 IYDAVVR 267
           ++  ++ 
Sbjct: 259 MFRRILN 265

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 46/188 (24%), Positives = 69/188 (36%), Gaps = 44/188 (23%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           IG G FG   L    L+ E       VAVK +   +   +   ++R           E I
Sbjct: 28  IGSGNFGVARLMRDKLTKE------LVAVKYIE--RGAAIDENVQR-----------E-I 67

Query: 109 CWLQGIS---------VI--NGKICIIMKFYEGSVG---DRMAQLKGGKLSLSNVFRYAI 154
              + +          VI     + IIM++  G  G   +R+     G+ S      +  
Sbjct: 68  INHRSLRHPNIVRFKEVILTPTHLAIIMEYASG--GELYERIC--NAGRFSEDEARFFFQ 123

Query: 155 DLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
            L  G+   HS  I   +LK  N +L  + A R  + D G         +  S     +G
Sbjct: 124 QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVG 179

Query: 213 TPNYMAPE 220
           TP Y+APE
Sbjct: 180 TPAYIAPE 187

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 63/313 (20%), Positives = 106/313 (33%), Gaps = 70/313 (22%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
            W    + L+    +G G FG+V  AT        D   +VAVK+L   K        + 
Sbjct: 40  KWEFPRNNLQFGKTLGAGAFGKVVEAT-AFGLGKEDAVLKVAVKML---KSTAH---ADE 92

Query: 95  LNDLF-----LKCQGV-EGICWLQGISVINGKICIIMKFYEG-------------SVGDR 135
              L      +   G  E I  L G     G + +I ++                   D 
Sbjct: 93  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152

Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRAVLGDVG 192
              +     S  ++  ++  +AQG+  L SK          N I   +  A R VL  + 
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASK----------NCIHRDV--AARNVL--LT 198

Query: 193 IPHLLLGIPLPSSD--LPRRL-GTPNY------------MAPEQWQPEVRGPISFETDSW 237
               +  I     D  L R +    NY            MAPE          + ++D W
Sbjct: 199 -NGHVAKI----GDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVW 250

Query: 238 GFACSIIEMLT-GVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
            +   + E+ + G+ P  G  V+ + Y  V    ++   P+  P  + +++  C+  +  
Sbjct: 251 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPT 309

Query: 296 SRPLMTDILRVFK 308
            RP    I    +
Sbjct: 310 HRPTFQQICSFLQ 322

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 44/218 (20%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-------VLLERLNDLFLK 101
           IG+G FG+V  A       D   +  VA+K++   K  R          +LE L      
Sbjct: 105 IGKGSFGQVVKAY------DHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQD-- 154

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                 +  +         IC+  +    ++ + + + K    SL  V ++A  + Q + 
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214

Query: 162 QLHSKGILVLNLKPFNFILNEADRAV--LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
            LH   I+  +LKP N +L +  R+   + D G           S    +R+ T  Y+  
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQRVYT--YI-- 260

Query: 220 EQWQ------PEV--RGPISFETDSWGFACSIIEMLTG 249
              Q      PEV          D W   C + E+LTG
Sbjct: 261 ---QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 33 DTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
          D + W      LKL   +GRG FG+V  A      +       VAVK+L   KE   
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEAD-AFGIDKTATCRTVAVKML---KEGAT 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	620
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.83
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.74
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.61
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.13
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.91
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.79
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.6
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.2
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.01
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.93
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.73
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.7
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.5
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.44
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.4
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.13
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.08
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.82
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.74
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.43
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.21
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.94
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.17
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.08
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	94.66
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.63
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	94.61
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.52
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	92.34
3mes_A	424	Choline kinase; malaria, structural genomics, stru	88.18
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.37

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=6.7e-56  Score=462.74  Aligned_cols=278  Identities=25%  Similarity=0.328  Sum_probs=229.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+++++|++++.||+|+||+||+|++..++   ..++.||||++++....  ....+.. +. .+++.++|||||+++
T Consensus        18 ~~~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~-E~-~il~~l~HpnIv~l~   92 (304)
T 3ubd_A           18 HEKADPSQFELLKVLGQGSFGKVFLVKKISGS---DARQLYAMKVLKKATLKVRDRVRTKM-ER-DILVEVNHPFIVKLH   92 (304)
T ss_dssp             CCCCCGGGEEEEEEEECGGGCEEEEEEECSST---TTTCEEEEEEEESEEEEEEECC--------CCCCCCCCTTEECEE
T ss_pred             cccCCccccEEEEEEecCCCeEEEEEEEccCC---CCCEEEEEEEEehHHcChHHHHHHHH-HH-HHHHHCCCCCCCeEE
Confidence            45678899999999999999999999875432   24568999999764321  1111222 21 356778999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++.+++.+|||||||+ |+|.+++.+  .+.+++.++..|+.||+.||+|||++||+||||||+|||++.++++||+||
T Consensus        93 ~~~~~~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DF  170 (304)
T 3ubd_A           93 YAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF  170 (304)
T ss_dssp             EEEEETTEEEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESS
T ss_pred             EEEEECCEEEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEeccc
Confidence            99999999999999999 577777763  468999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+.....   .....+.+||+.|||||++.+.   +|+.++|||||||++|||+||+.||.+.+..+++..+....  
T Consensus       171 Gla~~~~~~---~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--  242 (304)
T 3ubd_A          171 GLSKESIDH---EKKAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--  242 (304)
T ss_dssp             EEEEC--------CCCCSCCCCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--
T ss_pred             ccceeccCC---CccccccccCcccCCHHHhccC---CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC--
Confidence            999875432   2334567999999999999754   68999999999999999999999999999999999887653  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSS  327 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~  327 (620)
                      +.+|..+|+++++||.+||++||++||+     ++|+++ .+.+..+|.....+..++|+.|
T Consensus       243 ~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          243 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            4578899999999999999999999998     578887 6677788887777777777654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.6e-55  Score=456.56  Aligned_cols=267  Identities=19%  Similarity=0.293  Sum_probs=225.1

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...+++|++.+.||+|+||+||+|+++.++      +.||||++++...   .....+.+ +. .+++.++|||||++++
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~------~~~AiK~i~k~~~~~~~~~~~~~~-E~-~il~~l~HpnIv~l~~   99 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTR-ER-DVMSRLDHPFFVKLYF   99 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHH-HH-HHHTTCCCTTBCCEEE
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCC------CEEEEEEEEHHHCCCHHHHHHHHH-HH-HHHHhCCCCCCCeEEE
Confidence            456789999999999999999999987766      4899999975432   11222222 22 3567789999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.+++.+|||||||+ |+|.+++.+  .+.+++.++..|+.||+.||+|||+++|+||||||+|||++.++++||+|||
T Consensus       100 ~~~~~~~~yivmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFG  177 (311)
T 4aw0_A          100 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG  177 (311)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEeCCEEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence            9999999999999999 578887763  4689999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +|+.+.... ......+.+||+.|||||++.+.   .|+.++|||||||++|||+||++||.+.+..+++..+....  .
T Consensus       178 la~~~~~~~-~~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~  251 (311)
T 4aw0_A          178 TAKVLSPES-KQARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--Y  251 (311)
T ss_dssp             TCEECCTTT-TCCCBCCCCSCGGGCCHHHHHHS---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--C
T ss_pred             CceecCCCC-CcccccCcccCcccCCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--C
Confidence            999874321 22334567999999999999754   68999999999999999999999999999999999987654  4


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHH------HH-HHHhCCCCCCCCCc
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI------LR-VFKSDGGWTGHGSR  319 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~ei------l~-~L~~~~~~~~~~~~  319 (620)
                      .+|..+++++++||.+||++||++|||++|+      ++ .++++.+|......
T Consensus       252 ~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~  305 (311)
T 4aw0_A          252 DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  305 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCC
Confidence            5788999999999999999999999999885      33 45667788776543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.4e-54  Score=457.61  Aligned_cols=253  Identities=21%  Similarity=0.337  Sum_probs=211.4

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ..++|+++++||+|+||+||+|+++.++      +.||||+++...... ....+.++. .+++.++|||||++++++.+
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~E~-~il~~l~HpnIV~~~~~~~~   94 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDG------RQYVIKEINISRMSSKEREESRREV-AVLANMKHPNIVQYRESFEE   94 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTC------CEEEEEEEECTTSCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCC------CEEEEEEEehHHCCHHHHHHHHHHH-HHHHHCCCCCCCcEEEEEEE
Confidence            3579999999999999999999987665      489999998654322 222223333 35677799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++.+|||||||+ |+|.+++...+...+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+|+.
T Consensus        95 ~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  174 (350)
T 4b9d_A           95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV  174 (350)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEccccccee
Confidence            999999999998 6888888765567789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      +...   .....+.+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+..+++..+..... +.++.
T Consensus       175 ~~~~---~~~~~~~~GT~~YmAPE~l~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~~~~  247 (350)
T 4b9d_A          175 LNST---VELARACIGTPYYLSPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPVSL  247 (350)
T ss_dssp             CCHH---HHHHHHHHSCCTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCCT
T ss_pred             ecCC---cccccccCCCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCc
Confidence            6321   1112356899999999999754   689999999999999999999999999999999998887654 45678


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+|+++++||.+||++||++|||+.|+++
T Consensus       248 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          248 HYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            89999999999999999999999999997

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.1e-53  Score=435.82  Aligned_cols=248  Identities=21%  Similarity=0.333  Sum_probs=199.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||+||+|++..++      +.||||++++.....  ......++. .+++.++|||||++++++.++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~Ei-~il~~l~HpnIv~~~~~~~~~   85 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTG------QKVALKIINKKVLAKSDMQGRIEREI-SYLRLLRHPHIIKLYDVIKSK   85 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTC------CEEEEEEEECC------CHHHHHHHH-HHHHHCCCTTBCCEEEEEECS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEeHHHcCCHHHHHHHHHHH-HHHHHCCCCCCCeEEEEEEEC
Confidence            68999999999999999999977665      489999997654322  122222332 356667999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+|||||||+|+|.+.+.  +.+++++.++..++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...
T Consensus        86 ~~~~ivmEy~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           86 DEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             SEEEEEEECCCEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             CEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            9999999999999999886  45789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      .    .....+.+||+.|||||++.+..  .++.++|||||||++|+|+||+.||.+.+..++++.+...  ...+|..+
T Consensus       164 ~----~~~~~~~~GT~~Y~APE~~~~~~--y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~~p~~~  235 (275)
T 3hyh_A          164 D----GNFLKTSCGSPNYAAPEVISGKL--YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFL  235 (275)
T ss_dssp             ---------------CTTSCHHHHSSSS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTS
T ss_pred             C----CCccCCeeECcccCChhhhcCCC--CCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCCC
Confidence            3    22345678999999999997542  2357999999999999999999999999999998888765  34578899


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |+++++||.+||++||++|||++|+++
T Consensus       236 s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          236 SPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            999999999999999999999999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.4e-53  Score=446.08  Aligned_cols=271  Identities=21%  Similarity=0.313  Sum_probs=218.6

Q ss_pred             CCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           32 NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        32 ~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      +.....|+.++|.+.++||+|+||.||+|+++.... ..+++.||||+++.......+.+.++.  .+++.++|||||++
T Consensus        32 ~~~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~f~~E~--~il~~l~HpnIV~l  108 (329)
T 4aoj_A           32 DACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLP-EQDKMLVAVKALKEASESARQDFQREA--ELLTMLQHQHIVRF  108 (329)
T ss_dssp             -CCSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC----CEEEEEEEESCCSHHHHHHHHHHH--HHHTTCCCTTBCCE
T ss_pred             hhhhcccCHHHeEEEEEEccCCCcEEEEEEECCccc-CCCCeEEEEEEECcCCHHHHHHHHHHH--HHHHhCCCCCCCcE
Confidence            334556888999999999999999999999865321 234678999999876655545554443  36677899999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHh-------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCc
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQL-------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN  177 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~-------------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~N  177 (620)
                      +++|.+++.+|||||||+ |+|.+++...             ..+++++.+++.|+.||+.||+|||+++||||||||+|
T Consensus       109 ~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~N  188 (329)
T 4aoj_A          109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN  188 (329)
T ss_dssp             EEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhh
Confidence            999999999999999999 6777766532             13569999999999999999999999999999999999


Q ss_pred             EEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 007046          178 FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR  256 (620)
Q Consensus       178 ILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~  256 (620)
                      |||++++.+||+|||+|+.+.... ........+||+.|||||++.+.   .|+.++|||||||++|||+| |+.||.+.
T Consensus       189 ILl~~~~~~Ki~DFGla~~~~~~~-~~~~~~~~~gt~~ymAPE~~~~~---~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~  264 (329)
T 4aoj_A          189 CLVGQGLVVKIGDFGMSRDIYSTD-YYRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVVLWEIFTYGKQPWYQL  264 (329)
T ss_dssp             EEEETTTEEEECCCC-----------------CCCCGGGCCHHHHTTC---CCCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred             EEECCCCcEEEcccccceeccCCC-cceecCcccccccccChhhhcCC---CCCccccccchHHHHHHHHcCCCCCCCCC
Confidence            999999999999999998764321 12223456899999999999744   79999999999999999999 99999999


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..+++..+..+. .+..|..+|+++.+||.+||+.||++|||+.||++.|+..
T Consensus       265 ~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          265 SNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             CHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            9999998887654 4567889999999999999999999999999999988764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.3e-53  Score=444.97  Aligned_cols=268  Identities=21%  Similarity=0.336  Sum_probs=222.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -..|+.++|.+.++||+|+||+||+|++..... ..++..||||+++.......+.+.++.  .+++.++|||||+++++
T Consensus         7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~f~~E~--~il~~l~HpnIV~l~g~   83 (299)
T 4asz_A            7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCP-EQDKILVAVKTLKDASDNARKDFHREA--ELLTNLQHEHIVKFYGV   83 (299)
T ss_dssp             CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC-----CEEEEEEEECSCCHHHHHHHHHHH--HHHTTCCCTTBCCEEEE
T ss_pred             hcccCHHHeEEeeEEeeCCCcEEEEEEECCccc-CCCCEEEEEEEeCCCChHHHHHHHHHH--HHHHhCCCCCCccEEEE
Confidence            345888999999999999999999999865432 234678999999876655545454443  35677899999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQL-----------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~-----------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      |.+++.+|||||||+ |+|.+++...           ....+++.+++.++.||+.||+|||+++|+||||||+|||+++
T Consensus        84 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~  163 (299)
T 4asz_A           84 CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE  163 (299)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             EeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECC
Confidence            999999999999999 6777777542           1357999999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  261 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei  261 (620)
                      ++.+||+|||+|+....... ........||+.|||||++.+.   .|+.++|||||||++|||+| |+.||.+.+..++
T Consensus       164 ~~~~Ki~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~---~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~  239 (299)
T 4asz_A          164 NLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV  239 (299)
T ss_dssp             GGCEEECCCSCHHHHTGGGC-EEETTTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             CCcEEECCcccceecCCCCc-eeecCceecChhhcCHHHHcCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            99999999999987643211 1122345799999999999744   79999999999999999999 9999999999999


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..+..+. .+..|..+|+++.+||.+||+.||++||++.+|++.|+..
T Consensus       240 ~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          240 IECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             HHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            98887654 4567889999999999999999999999999999887763

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=8.2e-53  Score=440.15  Aligned_cols=261  Identities=25%  Similarity=0.364  Sum_probs=208.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...|+.++|++.++||+|+||+||+|+++.         .||||+++.....  ..+.+.++.  .+++.++|||||+++
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---------~vAvK~~~~~~~~~~~~~~f~~E~--~il~~l~HpNIV~l~   98 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHG---------DVAVKILKVVDPTPEQFQAFRNEV--AVLRKTRHVNILLFM   98 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSS---------EEEEEECCCSSCCHHHHHHHHHHH--HHHTTCCCTTBCCEE
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECC---------cEEEEEEEecCCCHHHHHHHHHHH--HHHHhCCCCCEeeEE
Confidence            456999999999999999999999997532         4999999754332  223333332  367778999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++. ++.+|||||||+ |+|.+.+.. ...++++.+++.|+.|||.||+|||+++||||||||+||||++++.+||+||
T Consensus        99 g~~~-~~~~~iVmEy~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DF  176 (307)
T 3omv_A           99 GYMT-KDNLAIVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF  176 (307)
T ss_dssp             EEEC-SSSCEEEEECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCC
T ss_pred             EEEE-CCeEEEEEEcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeec
Confidence            9875 456899999999 566666643 5578999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei-~~~i~~~~~  270 (620)
                      |+|+...... ........+||+.|||||++.+...++|+.++|||||||++|||+||+.||.+.+..+. ...+.....
T Consensus       177 Gla~~~~~~~-~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~  255 (307)
T 3omv_A          177 GLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA  255 (307)
T ss_dssp             SSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCC
T ss_pred             cCceecccCC-cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC
Confidence            9998764321 12234567899999999999766566899999999999999999999999998765544 444443333


Q ss_pred             CC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          271 IP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       271 ~~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .|   ..+..+|+++.+||.+||+.||++|||+.+|++.|+.
T Consensus       256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~  297 (307)
T 3omv_A          256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred             CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            33   3567899999999999999999999999999987664

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.5e-53  Score=443.56  Aligned_cols=270  Identities=20%  Similarity=0.349  Sum_probs=222.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -..|+.+++++.++||+|+||+||+|++.... +...++.||||+++..........+.++. .+++.++|||||+++|+
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~-~~~~~~~VAvK~l~~~~~~~~~~~f~~E~-~il~~l~HpNIV~l~g~   97 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPA-PGEQTQAVAIKTLKDKAEGPLREEFRHEA-MLRARLQHPNVVCLLGV   97 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC--------CEEEEEEECCC-CCC-CHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCc-cCCCCeEEEEEEECcccChHHHHHHHHHH-HHHHhCCCCCCCCcceE
Confidence            34588899999999999999999999986533 23456789999997655443333333333 35667799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      |..++.+|||||||+ |+|.+++....              ...+++.+++.++.||+.||+|||+++||||||||+|||
T Consensus        98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL  177 (308)
T 4gt4_A           98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL  177 (308)
T ss_dssp             ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence            999999999999999 67777775321              246899999999999999999999999999999999999


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV  258 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~  258 (620)
                      |++++.+||+|||+|+...... ........+||+.|||||++.+   +.|+.++|||||||++|||+| |..||.+.+.
T Consensus       178 l~~~~~~Ki~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~---~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~  253 (308)
T 4gt4_A          178 VYDKLNVKISDLGLFREVYAAD-YYKLLGNSLLPIRWMAPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN  253 (308)
T ss_dssp             ECGGGCEEECCSCCBCGGGGGG-CBCSSSSSCBCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred             ECCCCCEEECCcccceeccCCC-ceeEecccccCCcccCHHHHhC---CCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999998764322 1223345689999999999964   479999999999999999999 8999999999


Q ss_pred             HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       259 ~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .++...+..+. .++.|..+|+++.+|+.+||+.||++||++.+|++.|+...
T Consensus       254 ~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          254 QDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHcCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            99998887654 45578899999999999999999999999999999998753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.3e-53  Score=448.49  Aligned_cols=248  Identities=22%  Similarity=0.318  Sum_probs=211.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|++.++||+|+||.||+|+++.+++      .||||+++.........+.++.  .+++.++|||||++++++.+++.
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~------~vAiK~i~~~~~~~~~~~~~Ei--~il~~l~HpnIV~l~~~~~~~~~  145 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHENVVEMYNSYLVGDE  145 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCC------EEEEEEEEGGGCSSGGGGHHHH--HHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCC------EEEEEEEecCchhHHHHHHHHH--HHHHhCCCCCCCcEEEEEEECCE
Confidence            569999999999999999999877664      8999999765443333333333  35667799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|||||||+| +|.+++.   .+++++.++..|+.||+.||+|||++|||||||||+||||+.++++||+|||+|+.+..
T Consensus       146 ~~ivmEy~~gg~L~~~l~---~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             EEEEECCCTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEeCCCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            9999999995 5666553   35799999999999999999999999999999999999999999999999999987743


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~  278 (620)
                      .   .....+.+||+.|||||++.+.   +|+.++|||||||++|||++|++||.+.+..+++..+..... ....+..+
T Consensus       223 ~---~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~  296 (346)
T 4fih_A          223 E---VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV  296 (346)
T ss_dssp             S---SCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGS
T ss_pred             C---CCcccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccC
Confidence            2   2334567999999999999754   689999999999999999999999999999999888876532 22344679


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |+++++||.+||++||++|||+.|+++
T Consensus       297 s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          297 SPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.4e-52  Score=443.09  Aligned_cols=254  Identities=23%  Similarity=0.246  Sum_probs=212.3

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ...+.|++.++||+|+||.||+|+++.++      +.||||+++.....      .++ ..+++.++|||||++++++.+
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g------~~vAiK~i~~~~~~------~~E-~~il~~l~HpnIV~l~~~~~~  121 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTG------FQCAVKKVRLEVFR------VEE-LVACAGLSSPRIVPLYGAVRE  121 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCC------THH-HHTTTTCCCTTBCCEEEEEEE
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCC------CEEEEEEECHHHhH------HHH-HHHHHhCCCCCCCcEEEEEEE
Confidence            45578999999999999999999987766      48999999765432      112 235677899999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCcc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPH  195 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~  195 (620)
                      ++.+|||||||+ |+|.+++..  .+++++.++..|+.||+.||+|||+++||||||||+||||+.++ ++||+|||+|+
T Consensus       122 ~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          122 GPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL  199 (336)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred             CCEEEEEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence            999999999999 577777753  46899999999999999999999999999999999999999987 69999999999


Q ss_pred             cccCCCCCCC--CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-C
Q 007046          196 LLLGIPLPSS--DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-P  272 (620)
Q Consensus       196 ~~~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-~  272 (620)
                      .+........  .....+||+.|||||++.+.   +|+.++|||||||++|||+||++||.+.+..+++..+...... .
T Consensus       200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~  276 (336)
T 4g3f_A          200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK---PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR  276 (336)
T ss_dssp             EC------------CCCCCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG
T ss_pred             EccCCCcccceecCCccccCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch
Confidence            8753322111  22346899999999999754   6899999999999999999999999998887877777765432 2


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .++..+++++.+||.+||++||++|||+.|+++.|..
T Consensus       277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            4678999999999999999999999999999986654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.5e-52  Score=444.87  Aligned_cols=269  Identities=20%  Similarity=0.325  Sum_probs=221.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..|+.++|++.++||+|+||+||+|++..+++ ....+.||||+++..........+.++..++.++.+|||||+++++|
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~-~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSS-TTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCc-ccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            35899999999999999999999999887653 44667899999987665444444444444566666779999999999


Q ss_pred             EEC-CEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          116 VIN-GKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       116 ~~~-~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      ... +.+|||||||+ |+|.+++....              ...+++.+++.|+.|||.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            764 57999999999 67777775422              245899999999999999999999999999999999999


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV  258 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~  258 (620)
                      +++++.+||+|||+|+.+.... ........+||+.|||||++.+.   .|+.++|||||||++|||+| |..||.+.+.
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~---~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             eCCCCCEEECcchhhhhcccCC-CceeeccccccccccCHHHHhcC---CCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999998764321 11122356799999999999754   79999999999999999998 9999998765


Q ss_pred             HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       259 ~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+.+..+.....++..|..+++++.++|.+||+.||++|||+.+|++.|..
T Consensus       294 ~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            554444444555677889999999999999999999999999999987765

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.4e-52  Score=450.03  Aligned_cols=248  Identities=22%  Similarity=0.318  Sum_probs=212.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|+++++||+|+||.||+|+++.+++      .||||+++.........+.++.  .+++.++|||||+++++|.+++.
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~------~vAiK~i~~~~~~~~~~~~~Ei--~il~~l~HpnIV~l~~~~~~~~~  222 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHENVVEMYNSYLVGDE  222 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCC------EEEEEEEESTTCSSGGGHHHHH--HHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCC------EEEEEEEeccchhHHHHHHHHH--HHHHhCCCCCCCceEEEEEECCE
Confidence            569999999999999999999877664      8999999765544333333333  35677799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      +|||||||+| +|.+++.   .+++++..+..|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+..
T Consensus       223 ~~iVmEy~~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             EEEEEECCTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEeCCCCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            9999999995 5655553   35799999999999999999999999999999999999999999999999999987743


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~~  278 (620)
                      .   .....+.+||+.|||||++.+.   .|+.++|||||||++|||++|++||.+.+..+++..+..... ....+..+
T Consensus       300 ~---~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~  373 (423)
T 4fie_A          300 E---VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV  373 (423)
T ss_dssp             S---CCCBCCCEECTTTCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSS
T ss_pred             C---CccccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccC
Confidence            2   2334567999999999999754   689999999999999999999999999999999888876532 23345689


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++++++||.+||++||++||++.|+++
T Consensus       374 s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          374 SPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-51  Score=428.48  Aligned_cols=245  Identities=22%  Similarity=0.320  Sum_probs=202.8

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE----
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI----  117 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~----  117 (620)
                      |++.++||+|+||.||+|.++.++      ..||+|++....... ....+.++. .+++.++|||||+++++|..    
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~E~-~il~~l~HpnIV~~~~~~~~~~~~  100 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEA-EMLKGLQHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEEEEETT
T ss_pred             EEeeeEEecCcCcEEEEEEECCCC------eEEEEEEEchhhCCHHHHHHHHHHH-HHHHhCCCCCCCcEEEEEeeccCC
Confidence            488899999999999999987766      479999997644322 222222222 36777899999999999875    


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEcc-CCcEEEeccCC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNE-ADRAVLGDVGI  193 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~-~~~vkL~DFGl  193 (620)
                      ++.+|||||||+ |+|.+++.  +.+.+++..+..|+.||+.||+|||+++  |+||||||+||||+. ++.+||+|||+
T Consensus       101 ~~~~~lvmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGl  178 (290)
T 3fpq_A          101 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             EEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred             CcEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcC
Confidence            346899999999 57777775  3468999999999999999999999998  999999999999984 79999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i~~~~~~~  272 (620)
                      |+...     .....+.+|||.|||||++.+    +|+.++|||||||++|||+||+.||.+.+ ...++..+.....++
T Consensus       179 a~~~~-----~~~~~~~~GTp~YmAPE~~~~----~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~  249 (290)
T 3fpq_A          179 ATLKR-----ASFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  249 (290)
T ss_dssp             GGGCC-----TTSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             CEeCC-----CCccCCcccCccccCHHHcCC----CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC
Confidence            98642     233456789999999999853    58999999999999999999999997654 556666665555555


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++..+++++++||.+||++||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            567788999999999999999999999999997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-49  Score=427.47  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=209.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      ++|+++++||+|+||.||+|+++.+++      .||||+++......  ...++++ . .+++.++|||||++++++.. 
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~------~vAiK~i~~~~~~~~~~~~~~~E-i-~il~~l~HpnIv~l~~~~~~~  125 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQ------QVAIKKIPNAFDVVTNAKRTLRE-L-KILKHFKHDNIIAIKDILRPT  125 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCC------EEEEEEETTTTSSHHHHHHHHHH-H-HHHHHCCCTTBCCEEEECCCS
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCC------EEEEEEECccccchHHHHHHHHH-H-HHHHhcCCCCcceEeeeeecc
Confidence            689999999999999999999877764      89999997654322  2223332 2 35677799999999999764 


Q ss_pred             -----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          118 -----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       118 -----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                           .+.+|||||||+|+|.+.+.  +.+++++..+..|+.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecc
Confidence                 35799999999999888885  46789999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC-CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIP-LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~-~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +|+.+.... .......+.+||+.|||||++.+.  ..++.++||||+||++|||++|++||.+.+..+.+..|......
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~--~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~  281 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT  281 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCC--CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence            998764332 123345677999999999998643  24788999999999999999999999999998888887654333


Q ss_pred             CC-----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PP-----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~-----------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.                             +...+++++.+||.+||.+||++|||+.|+++
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            21                             01357899999999999999999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.6e-49  Score=448.95  Aligned_cols=280  Identities=20%  Similarity=0.294  Sum_probs=231.5

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHH-HHHHHHHccCCCceeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLER-LNDLFLKCQGVEGICW  110 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~-~~~~~l~~~~h~nIv~  110 (620)
                      +.-+..++|++++.||+|+||.||+|+++.++      +.||||++++....   .......+ ....+++..+|||||+
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg------~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~  256 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC  256 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCCC------CEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence            44567789999999999999999999987766      48999999753321   11111221 1112455679999999


Q ss_pred             eEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          111 LQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       111 l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      ++++|.+.+.+|||||||+ |+|.+++.  +.+.+++..+..|+.||+.||+|||++|||||||||+||||+.+|++||+
T Consensus       257 l~~~f~~~~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~  334 (689)
T 3v5w_A          257 MSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS  334 (689)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEEECCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEec
Confidence            9999999999999999999 57777775  34689999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVV  266 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---~~~ei~~~i~  266 (620)
                      |||+|+.+..     ....+.+||+.|||||++.+.  ..|+.++|||||||++|||++|.+||.+.   +..++...+.
T Consensus       335 DFGlA~~~~~-----~~~~t~~GTp~YmAPEvl~~~--~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~  407 (689)
T 3v5w_A          335 DLGLACDFSK-----KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL  407 (689)
T ss_dssp             CCTTCEECSS-----CCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH
T ss_pred             ccceeeecCC-----CCCCCccCCcCccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Confidence            9999987643     334567999999999998521  26899999999999999999999999764   3445555554


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCccc
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGYTE  331 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~  331 (620)
                      ..  ...+|..+|+++++||.+||++||++|++     ++||++ .++++.+|.....+..++|+.|....
T Consensus       408 ~~--~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~  476 (689)
T 3v5w_A          408 TM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGE  476 (689)
T ss_dssp             HC--CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTC
T ss_pred             CC--CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCC
Confidence            43  45678899999999999999999999997     789987 78889999999888888888886443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.1e-49  Score=415.57  Aligned_cols=259  Identities=20%  Similarity=0.240  Sum_probs=187.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      ++|++++.||+|+||.||+|+++.++      +.||||+++............++. .+++.++|||||++++++...+ 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~E~-~il~~l~HpnIV~~~~~~~~~~~   77 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDD------CNYAIKRIRLPNRELAREKVMREV-KALAKLEHPGIVRYFNAWLEKNT   77 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTC------CEEEEEEEEECSSHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEEEC-
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCC------CEEEEEEEeccCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEEecCc
Confidence            36999999999999999999987766      489999997655443333333333 3567789999999999987644 


Q ss_pred             -----------EEEEEEecCC-CChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          120 -----------KICIIMKFYE-GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       120 -----------~~~IVmE~~~-GsLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                                 .+|||||||+ |+|.+++..... ...++..++.|+.||+.||+|||++||+||||||+|||++.++.+
T Consensus        78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~v  157 (299)
T 4g31_A           78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVV  157 (299)
T ss_dssp             ---------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCE
T ss_pred             cccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcE
Confidence                       4799999998 577777753211 234567789999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCC---------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 007046          187 VLGDVGIPHLLLGIPLP---------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  257 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~---------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~  257 (620)
                      ||+|||+|+.+......         ....++.+||+.|||||++.+.   +|+.++|||||||++|||++   ||.+..
T Consensus       158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyell~---Pf~~~~  231 (299)
T 4g31_A          158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN---SYSHKVDIFSLGLILFELLY---PFSTQM  231 (299)
T ss_dssp             EECCCCCC--------------------------CCCTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC---CCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence            99999999887532211         1123456899999999999754   68999999999999999996   776532


Q ss_pred             H-HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCC
Q 007046          258 V-DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGW  313 (620)
Q Consensus       258 ~-~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~  313 (620)
                      . ...+..+... ..++.+...++++.+||.+||++||++|||+.|+++ .+.+..+|
T Consensus       232 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          232 ERVRTLTDVRNL-KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             HHHHHHHHHHTT-CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             HHHHHHHHHhcC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence            2 1233333322 222233455677899999999999999999999997 44444444

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1e-48  Score=408.85  Aligned_cols=255  Identities=21%  Similarity=0.292  Sum_probs=196.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      .+|.+.++||+|+||+||+|+++        ++.||||+++....   ..+..+.+...+..++|||||+++++|..++ 
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~--------g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~   71 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR--------GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--------TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--------CEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC
Confidence            46999999999999999999863        25799999965432   2222222222345579999999999998753 


Q ss_pred             ---EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeecccCCcEEEccCCcEE
Q 007046          120 ---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       120 ---~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~--------gIiHrDLKP~NILld~~~~vk  187 (620)
                         .+|||||||+ |+|.+.+.   ..++++..+.+++.|++.||+|||++        +|+||||||+||||+.++.+|
T Consensus        72 ~~~~~~lV~Ey~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K  148 (303)
T 3hmm_A           72 TWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CceEEEEEecCCCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence               6899999999 67777664   35789999999999999999999987        899999999999999999999


Q ss_pred             EeccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCC---CCCCCchhhHHHHHHHHHHHHhCCCCCCC--------
Q 007046          188 LGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCG--------  255 (620)
Q Consensus       188 L~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~--------  255 (620)
                      |+|||+|+........ .......+||+.|||||++.+..   .+.++.++|||||||++|||+||.+||..        
T Consensus       149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~  228 (303)
T 3hmm_A          149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence            9999999877543221 12233568999999999987542   12467799999999999999999776532        


Q ss_pred             --C-----CHHHHHHHHHhccCCCCCCCC-----CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          256 --R-----SVDEIYDAVVRRQEIPPIPSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       256 --~-----~~~ei~~~i~~~~~~~~~p~~-----~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                        .     ...++...+.....+|.+|..     +++.+.+|+.+||+.||++|||+.+|++.|+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             hhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence              1     234555555555556666643     34578999999999999999999999998765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.4e-46  Score=401.96  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=195.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.++||+|+||+||+|+++...   ..++.||||.+.+....  .... ++..++..+.+||||+++++++.++++
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~---~~~~~vAiK~i~~~~~~--~~~~-~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQV---GPEEKIALKHLIPTSHP--IRIA-AELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTT---SCEEEEEEEEECTTSCH--HHHH-HHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccC---CCCCEEEEEEEccccCH--HHHH-HHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            57999999999999999999875321   23468999998765432  2222 333345556689999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEeccCCccccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLL  198 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~DFGla~~~~  198 (620)
                      +|||||||+ |+|.+.+     +.+++.++..|+.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+...
T Consensus        95 ~~lvmE~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEEEECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             EEEEEeCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence            999999998 5777666     258999999999999999999999999999999999999877 799999999998653


Q ss_pred             CCCC-------------------------CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 007046          199 GIPL-------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR  253 (620)
Q Consensus       199 ~~~~-------------------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf  253 (620)
                      ....                         ......+.+||+.|||||++.+.  ..|+.++||||+||++|||+||+.||
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC--PNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCCccchhhhHHHHHHHHHCCCCC
Confidence            3211                         01123456899999999998643  24888999999999999999999998


Q ss_pred             CC-CCHHHHHHHHHhcc----------------------------------------------------CCCCCCCCCCH
Q 007046          254 CG-RSVDEIYDAVVRRQ----------------------------------------------------EIPPIPSGLPP  280 (620)
Q Consensus       254 ~~-~~~~ei~~~i~~~~----------------------------------------------------~~~~~p~~~s~  280 (620)
                      .. .+..+.+..|....                                                    ........+|+
T Consensus       248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~  327 (361)
T 4f9c_A          248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD  327 (361)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence            54 44444443332200                                                    00011246789


Q ss_pred             HHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          281 AVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       281 ~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++.+||.+||++||++|||++|+++
T Consensus       328 ~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          328 EAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhc
Confidence            9999999999999999999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.5e-47  Score=428.93  Aligned_cols=249  Identities=20%  Similarity=0.306  Sum_probs=214.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++++.||+|+||.||+|+++.+++      .||||++..........+.++.  .+++.++|||||+++++|.+++.
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~------~~AiK~i~~~~~~~~~~~~~Ei--~il~~l~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGN------NFAAKFVMTPHESDKETVRKEI--QTMSVLRHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCC------EEEEEEEECCSHHHHHHHHHHH--HHHHHTCCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCC------EEEEEEEeccchhhHHHHHHHH--HHHHhCCCCCCCeEEEEEEECCE
Confidence            689999999999999999999877764      8999999876654444443333  35677899999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC--CcEEEeccCCcccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHLL  197 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~--~~vkL~DFGla~~~  197 (620)
                      +|||||||+ |+|.+++.. +.+.+++.++..|+.||+.||+|||+++|+||||||+|||++.+  +.+||+|||+|+.+
T Consensus       229 ~~iv~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEEEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            999999998 577777653 45689999999999999999999999999999999999999854  89999999999987


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--CCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--~~p  275 (620)
                      ..    .......+||+.|||||++.+.   +|+.++|||||||++|||++|.+||.+.+..+++..+.......  ..+
T Consensus       308 ~~----~~~~~~~~GT~~y~APEv~~~~---~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  380 (573)
T 3uto_A          308 DP----KQSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF  380 (573)
T ss_dssp             CT----TSEEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGG
T ss_pred             cC----CCceeeeEECccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccc
Confidence            42    2334456899999999999754   68999999999999999999999999999999999887665432  234


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+++++++||.+||++||.+||++.|+++
T Consensus       381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          381 SGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            679999999999999999999999999998

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3e-46  Score=395.56  Aligned_cols=275  Identities=18%  Similarity=0.308  Sum_probs=230.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +..++|++.+.||+|+||.||+|++..++      +.||||++++...   ........+.  .+++..+||||++++++
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~l~~~   73 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTVTES--RVLQNTRHPFLTALKYA   73 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHSCCCTTBCCEEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhhhHHHHHHHHH--HHHHhCCCCcCcceEEE
Confidence            56789999999999999999999987655      4899999975421   1122222222  35667799999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +...+.+||||||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+
T Consensus        74 ~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~  151 (337)
T 1o6l_A           74 FQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccc
Confidence            9999999999999985 6666665  346799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++....   ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+...  ...
T Consensus       152 a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~  223 (337)
T 1o6l_A          152 CKEGIS---DGATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIR  223 (337)
T ss_dssp             CBCSCC---TTCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC
T ss_pred             hhhccc---CCCcccccccChhhCChhhhcCC---CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCC
Confidence            986432   12234566899999999999644   6889999999999999999999999999988888888754  345


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      +|..+++++.+||.+||+.||++||     ++.++++ .+....+|.....+...+|+.|...
T Consensus       224 ~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~  286 (337)
T 1o6l_A          224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT  286 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCS
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCC
Confidence            6788999999999999999999999     8999998 6777888888777777778777644

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.6e-46  Score=400.11  Aligned_cols=281  Identities=20%  Similarity=0.261  Sum_probs=225.3

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ....+..++|++.+.||+|+||.||+|+++.++      +.||||++++.....  .......+..++..+.+||||+++
T Consensus        16 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l   89 (353)
T 3txo_A           16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETG------DLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL   89 (353)
T ss_dssp             -------CCEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CcCCCchhheEEEEEEeeCCCEEEEEEEEcCCC------CEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeE
Confidence            455688899999999999999999999987665      489999997543211  112222233334445589999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+.+||||||++| +|.+.+..  ...+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|
T Consensus        90 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~D  167 (353)
T 3txo_A           90 FCCFQTPDRLFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLAD  167 (353)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEcc
Confidence            9999999999999999995 66666653  46799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....   ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+.... 
T Consensus       168 FG~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-  240 (353)
T 3txo_A          168 FGMCKEGIC---NGVTTATFCGTPDYIAPEILQEM---LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-  240 (353)
T ss_dssp             CTTCBCSCC------------CCGGGCCHHHHHHH---HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-
T ss_pred             ccceeeccc---CCccccccCCCcCeEChhhcCCC---CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-
Confidence            999986432   12334566899999999998754   58889999999999999999999999999999999887654 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLM------TDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~------~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                       ..+|..+++++.+||.+||++||++||++      .++++ .+.+..+|.....+...+|+.|...
T Consensus       241 -~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~  306 (353)
T 3txo_A          241 -VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIK  306 (353)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             -CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCC
Confidence             45678899999999999999999999998      88887 6777889988888888888877643

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.1e-45  Score=399.90  Aligned_cols=282  Identities=20%  Similarity=0.293  Sum_probs=227.7

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ....+..++|++++.||+|+||.||+|++..++      +.||||++++......  ......+..++.++.+||||+++
T Consensus        45 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l  118 (396)
T 4dc2_A           45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL  118 (396)
T ss_dssp             ----CCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCE
T ss_pred             cccCCChhHcEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCee
Confidence            455688899999999999999999999987665      4899999986532221  11223333345556689999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++.+.+.+||||||++| +|.+.+.  +.+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|
T Consensus       119 ~~~~~~~~~~~lV~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~D  196 (396)
T 4dc2_A          119 HSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD  196 (396)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEECCEEEEEEEcCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEee
Confidence            9999999999999999985 6666665  346799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------CHHHH
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------SVDEI  261 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---------~~~ei  261 (620)
                      ||+++....   ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||...         ....+
T Consensus       197 FGla~~~~~---~~~~~~~~~gt~~Y~aPE~l~~~---~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~  270 (396)
T 4dc2_A          197 YGMCKEGLR---PGDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  270 (396)
T ss_dssp             CTTCBCCCC---TTCCBCCCCBCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH
T ss_pred             cceeeeccc---CCCccccccCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH
Confidence            999986432   22334567899999999999754   6889999999999999999999999642         23345


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHH-HHHhCCCCCCCCCccCCCCCCCCccc
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM------TDILR-VFKSDGGWTGHGSRILPDKSSSGYTE  331 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~------~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~  331 (620)
                      .+.+...  ...+|..+++++.+||.+||+.||++||++      .+|++ .+++..+|.....+...+|+.|....
T Consensus       271 ~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~  345 (396)
T 4dc2_A          271 FQVILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISG  345 (396)
T ss_dssp             HHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCS
T ss_pred             HHHHhcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCC
Confidence            5555543  455788899999999999999999999984      78887 67778899888888888888877543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.5e-45  Score=395.55  Aligned_cols=280  Identities=24%  Similarity=0.331  Sum_probs=229.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHH--HHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--LERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~--~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++++.||+|+||.||+|+++.++      +.||||++++.........  ...+..++++..+||||++++
T Consensus        32 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~  105 (373)
T 2r5t_A           32 NPHAKPSDFHFLKVIGKGSFGKVLLARHKAEE------VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH  105 (373)
T ss_dssp             CTTCCGGGEEEEEEEECCTTCEEEEEEETTTC------CEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEE
T ss_pred             CCCCChhheEEEEEEeeCCCeEEEEEEEcCCC------CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEE
Confidence            45578899999999999999999999987665      4899999976543221111  111222235667999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+.+||||||++| +|.+.+..  ...+++..++.++.||+.||+|||++||+||||||+|||++.++++||+||
T Consensus       106 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DF  183 (373)
T 2r5t_A          106 FSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDF  183 (373)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeC
Confidence            999999999999999985 66666653  467899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....   ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..++++.+....  
T Consensus       184 G~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--  255 (373)
T 2r5t_A          184 GLCKENIE---HNSTTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--  255 (373)
T ss_dssp             CBCGGGBC---CCCCCCSBSCCCCCCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--
T ss_pred             cccccccc---CCCccccccCCccccCHHHhCCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--
Confidence            99986533   12344567899999999999744   68899999999999999999999999999999998887653  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCH----HHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLM----TDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      ..++..+++++.+||.+||+.||++||++    .++++ .+.+..+|.....+...+|+.|...
T Consensus       256 ~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~  319 (373)
T 2r5t_A          256 LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVS  319 (373)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCC
T ss_pred             cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCC
Confidence            44678899999999999999999999986    46665 5667788988877777888777643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.5e-45  Score=391.37  Aligned_cols=279  Identities=21%  Similarity=0.301  Sum_probs=224.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|+++.++      +.||||++++...   ..... ...+..++....+||||+++
T Consensus        11 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~-~~~E~~il~~~~~hp~iv~l   83 (345)
T 1xjd_A           11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTN------QFFAIKALKKDVVLMDDDVEC-TMVEKRVLSLAWEHPFLTHM   83 (345)
T ss_dssp             -----CTTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHH-HHHHHHHHHHHTTCTTBCCE
T ss_pred             cCCCChHHeEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhHHhhhhhhHHH-HHHHHHHHHhcCCCCCCCcE
Confidence            34577899999999999999999999987655      5899999975421   11122 22233344445699999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++.+.+.+||||||++ |+|.+.+..  .+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|
T Consensus        84 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~D  161 (345)
T 1xjd_A           84 FCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIAD  161 (345)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeE
Confidence            999999999999999998 567666653  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....   ........+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+...  
T Consensus       162 FG~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--  233 (345)
T 1xjd_A          162 FGMCKENML---GDAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--  233 (345)
T ss_dssp             CTTCBCCCC---TTCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--
T ss_pred             Chhhhhccc---CCCcccCCCCCcccCChhhhcCC---CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--
Confidence            999986432   12234567899999999999754   6889999999999999999999999999999998888655  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHH-HHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMT-DILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~-eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      .+.+|..+++++.+||.+||..||++||++. +|++ .+....+|.....+...+|+.|...
T Consensus       234 ~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~  295 (345)
T 1xjd_A          234 NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK  295 (345)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHHHHHTTCSCC-------
T ss_pred             CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCHHHHhhCCCCCCcCCCCC
Confidence            3456788999999999999999999999997 8876 6777888887777777777776543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5.1e-45  Score=388.60  Aligned_cols=279  Identities=21%  Similarity=0.277  Sum_probs=227.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|++..++      +.||||++++.....  .......+..++....+||||++++
T Consensus        14 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~   87 (353)
T 2i0e_A           14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTD------ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH   87 (353)
T ss_dssp             -----CTTEEEEEEEEEETTEEEEEEEETTEE------EEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred             cCCCchHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEE
Confidence            45578899999999999999999999986554      589999997543211  1111222222333344899999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+.+||||||++| +|.+.+..  .+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+||
T Consensus        88 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DF  165 (353)
T 2i0e_A           88 SCFQTMDRLYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF  165 (353)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEcCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeC
Confidence            999999999999999985 77776653  357999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....   ........+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.+..++++.+....  
T Consensus       166 G~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--  237 (353)
T 2i0e_A          166 GMCKENIW---DGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--  237 (353)
T ss_dssp             TTCBCCCC---TTCCBCCCCSCGGGCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--
T ss_pred             Cccccccc---CCcccccccCCccccChhhhcCC---CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--
Confidence            99986432   12234567899999999999644   68899999999999999999999999999999998887653  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      ..+|..+++++.+||.+||..||++||+     +.+|++ .+.+..+|.....+...+|+.|..
T Consensus       238 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~  301 (353)
T 2i0e_A          238 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKA  301 (353)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCC
Confidence            4567899999999999999999999995     688887 677788998888888888887764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.7e-45  Score=395.37  Aligned_cols=284  Identities=19%  Similarity=0.257  Sum_probs=231.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+..++|++.+.||+|+||.||+|++..++      +.||+|++++......  .....++. .+++..+||||+++++
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~~AiK~~~k~~~~~~~~~~~~~~E~-~il~~l~hp~Iv~l~~  136 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR------KVYAMKLLSKFEMIKRSDSAFFWEER-DIMAFANSPWVVQLFY  136 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTCCCSTHHHHH-HHHHHCCCTTBCCEEE
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCC------cEEEEEEEehhhhhhhHHHHHHHHHH-HHHHhCCCCCCCeEEE
Confidence            3467889999999999999999999987665      4899999965221110  11111222 3566779999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.+++.+|||||||+| +|.+++.   ...+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||
T Consensus       137 ~~~~~~~~~lV~E~~~gg~L~~~l~---~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG  213 (410)
T 3v8s_A          137 AFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG  213 (410)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccc
Confidence            99999999999999985 6666654   3579999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++......  .....+.+||+.|||||++.+... +.++.++|||||||++|||++|..||.+.+..+++..+......
T Consensus       214 ~a~~~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  291 (410)
T 3v8s_A          214 TCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS  291 (410)
T ss_dssp             TCEECCTTS--EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             eeEeeccCC--cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc
Confidence            998763211  112346689999999999975421 12778999999999999999999999999999999888765432


Q ss_pred             CCC--CCCCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCCCCCCccCCCCCCCCccc
Q 007046          272 PPI--PSGLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWTGHGSRILPDKSSSGYTE  331 (620)
Q Consensus       272 ~~~--p~~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~~  331 (620)
                      ..+  ...+++++++||.+||..+|.+  ||++++|++ .+.+..+|.....+...+|+.|....
T Consensus       292 ~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~  356 (410)
T 3v8s_A          292 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS  356 (410)
T ss_dssp             CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSS
T ss_pred             ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHHHHhhcccCCCCCCcCCC
Confidence            333  3579999999999999999988  999999998 77788899988888888888887543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-44  Score=379.57  Aligned_cols=273  Identities=23%  Similarity=0.288  Sum_probs=229.1

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|++.+.||+|+||.||+|++..++      +.||+|++++.....  ......++ ..+++..+||||++++++
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E-~~~l~~l~hp~Iv~~~~~   74 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNG------RYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHPFIIRMWGT   74 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHH-HHHHHSCCBTTBCCEEEE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEHHHhhhhhHHHHHHHH-HHHHhhCCCCCCceEeEE
Confidence            356789999999999999999999987655      489999997543211  11111222 235677899999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.+.+.+|+||||++| +|.+.+.  +...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        75 ~~~~~~~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~  152 (318)
T 1fot_A           75 FQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF  152 (318)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCc
Confidence            9999999999999985 7777665  356799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++....      .....+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+.+..+....  ..
T Consensus       153 a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~  221 (318)
T 1fot_A          153 AKYVPD------VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LR  221 (318)
T ss_dssp             CEECSS------CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CC
T ss_pred             ceecCC------ccccccCCccccCHhHhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CC
Confidence            987532      23456899999999998644   68899999999999999999999999999988888887653  45


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      +|..+++++.++|.+||..||++||     +++++++ .+.+..+|.....+...+|+.|..
T Consensus       222 ~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~  283 (318)
T 1fot_A          222 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPI  283 (318)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCc
Confidence            6788999999999999999999999     8999997 677788888877777777776654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=2.6e-44  Score=381.57  Aligned_cols=278  Identities=21%  Similarity=0.298  Sum_probs=225.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|++.+.||+|+||.||+|++..++      +.||||++++...  .........+..++....+||||++++++
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~   78 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTD------RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC   78 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECCCC------CEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEE
Confidence            456789999999999999999999987655      5899999986532  22222233333344555689999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +...+.+|+||||++| +|.+.+..  .+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+
T Consensus        79 ~~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~  156 (345)
T 3a8x_A           79 FQTESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM  156 (345)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccc
Confidence            9999999999999985 66666653  45799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC---------CCHHHHHHH
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG---------RSVDEIYDA  264 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~---------~~~~ei~~~  264 (620)
                      ++....   ........+||+.|+|||++.+.   .++.++|+|||||++|||++|..||..         .....+++.
T Consensus       157 a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  230 (345)
T 3a8x_A          157 CKEGLR---PGDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  230 (345)
T ss_dssp             CBCSCC---TTCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred             cccccC---CCCcccccCCCccccCccccCCC---CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence            986432   12234556899999999999754   688999999999999999999999975         233445565


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH------HHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM------TDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~------~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      +...  ...+|..+++++.+||.+||+.||++||++      .++++ .+....+|.....+...+|+.+...
T Consensus       231 i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~  301 (345)
T 3a8x_A          231 ILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS  301 (345)
T ss_dssp             HHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             HHcC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCC
Confidence            6544  345788899999999999999999999985      78887 6777888887777777777776543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.2e-44  Score=382.95  Aligned_cols=275  Identities=21%  Similarity=0.293  Sum_probs=231.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++++.||+|+||.||+|++..++      +.||||++++....   ....+..+.  .+++.++||||+++
T Consensus        35 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~  106 (350)
T 1rdq_E           35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG------NHYAMKILDKQKVVKLKQIEHTLNEK--RILQAVNFPFLVKL  106 (350)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHTTCCCTTBCCE
T ss_pred             ccCCCHHHCEEEEEeecCcCcEEEEEEECCCC------CEEEEEEEEhHHhccHHHHHHHHHHH--HHHHhCCCCCCCeE
Confidence            44567799999999999999999999987655      48999999754321   112222222  35667799999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++.+.+.+||||||++ |+|.+.+..  .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus       107 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~D  184 (350)
T 1rdq_E          107 EFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD  184 (350)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEcCCEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcc
Confidence            999999999999999998 577777753  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....      .....+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+.... 
T Consensus       185 Fg~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-  254 (350)
T 1rdq_E          185 FGFAKRVKG------RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-  254 (350)
T ss_dssp             CTTCEECSS------CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-
T ss_pred             cccceeccC------CcccccCCccccCHHHhcCC---CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC-
Confidence            999987632      23456899999999999744   68899999999999999999999999999999998887653 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                       ..+|..+++++.++|.+||+.||++||+     +++|++ .+....+|.....+...+|+.|...
T Consensus       255 -~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~  319 (350)
T 1rdq_E          255 -VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK  319 (350)
T ss_dssp             -CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             -CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCC
Confidence             4567889999999999999999999998     899987 6777888887777777777776543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.1e-44  Score=396.84  Aligned_cols=282  Identities=19%  Similarity=0.248  Sum_probs=226.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|++.++||+|+||.||+|++..++      +.||||++++.......  ....++. .++...+|+||++++++
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~------~~vAvK~~~~~~~~~~~~~~~~~~E~-~il~~~~hp~Iv~l~~~  142 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNAD------KVFAMKILNKWEMLKRAETACFREER-DVLVNGDSKWITTLHYA  142 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEHHHHHHTTTTCCHHHHH-HHHHHSCTTTBCCEEEE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCCC------cEEEEEEEEHHHhhhHHHHHHHHHHH-HHHHhCCCCCEEEEEEE
Confidence            466789999999999999999999987655      48999999753221111  1122222 34566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.+.+.+|||||||+ |+|.+.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       143 ~~~~~~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGl  221 (437)
T 4aw2_A          143 FQDDNNLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGS  221 (437)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EeeCCEEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence            999999999999997 566666653 357899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      ++......  .......+||+.|||||++...  ..+.++.++|||||||++|||++|+.||.+.+..+++..+......
T Consensus       222 a~~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~  299 (437)
T 4aw2_A          222 CLKLMEDG--TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER  299 (437)
T ss_dssp             CEECCTTS--CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             hhhcccCC--CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc
Confidence            98764321  1123446899999999998621  1335889999999999999999999999999999998888754322


Q ss_pred             ---CCCCCCCCHHHHHHHHHhhhcCcCC--CCCHHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          272 ---PPIPSGLPPAVENVLLGCFEYDLRS--RPLMTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       272 ---~~~p~~~s~~l~~Li~~cL~~dP~~--RPs~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                         +.....+++++++||++||..+|++  ||+++|+++ .+.+..+|....  ...+|+.|...
T Consensus       300 ~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l~--~~~~p~~P~~~  362 (437)
T 4aw2_A          300 FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIR--NCEAPYIPEVS  362 (437)
T ss_dssp             CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTGG--GSCCSCCCCCS
T ss_pred             ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHHh--hCCCCCCCcCC
Confidence               3333569999999999999888888  999999998 788889999874  45566666543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.1e-44  Score=377.33  Aligned_cols=281  Identities=21%  Similarity=0.264  Sum_probs=220.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|++....   ..++.||+|+++......   ......++. .+++.++||||+++
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~   86 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGA---NTGKIFAMKVLKKAMIVRNAKDTAHTKAER-NILEEVKHPFIVDL   86 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSST---TTTCEEEEEEECCC--------------HH-HHHHHCCCTTBCCE
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccC---CCCcEEEEEEEEHHHhhhhhhHHHHHHHHH-HHHHhCCCCCccce
Confidence            45688899999999999999999999875321   245689999998653211   111122222 35666789999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+.+||||||++ |+|.+.+..  .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~D  164 (327)
T 3a62_A           87 IYAFQTGGKLYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTD  164 (327)
T ss_dssp             EEEEECSSCEEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECC
T ss_pred             eEEEEcCCEEEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEe
Confidence            999999999999999998 566666653  45789999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++.....   .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  
T Consensus       165 fg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--  236 (327)
T 3a62_A          165 FGLCKESIHD---GTVTHTFCGTIEYMAPEILMRS---GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC--  236 (327)
T ss_dssp             CSCC-------------CTTSSCCTTSCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--
T ss_pred             CCcccccccC---CccccccCCCcCccCHhhCcCC---CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--
Confidence            9998764321   1223456899999999998643   6889999999999999999999999999988888888665  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      ...+|..+++++.++|.+||..||++||     ++.++++ .+....+|.....+...+|+.+..
T Consensus       237 ~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~  301 (327)
T 3a62_A          237 KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLL  301 (327)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCc
Confidence            3456788999999999999999999999     7889988 566677777666666666666553

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-44  Score=390.36  Aligned_cols=281  Identities=20%  Similarity=0.272  Sum_probs=223.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|++.+.||+|+||.||+|+++.++      +.||||++++.......  ....++. .++...+|+||++++++
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~------~~vAiK~l~k~~~~~~~~~~~~~~E~-~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTG------QVYAMKIMNKWDMLKRGEVSCFREER-DVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHHGGGCCHHHHH-HHHHHSCTTTBCCEEEE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeHHHhhhHHHHHHHHHHH-HHHHhcCCCCeeeEEEE
Confidence            467789999999999999999999987655      48999999753221111  1122222 24566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.+.+.+||||||++ |+|.+++.+ .+..+++..+..++.||+.||+|||+++|+||||||+|||++.++++||+|||+
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGl  208 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGS  208 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechh
Confidence            999999999999997 577776654 345899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCC----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~----~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ++......  .......+||+.|||||++...    ..+.++.++|+|||||++|||++|+.||.+.+..+++..+....
T Consensus       209 a~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~  286 (412)
T 2vd5_A          209 CLKLRADG--TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK  286 (412)
T ss_dssp             CEECCTTS--CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred             heeccCCC--ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            98764311  1122346899999999998631    12358899999999999999999999999999998888887543


Q ss_pred             C---CCCCCCCCCHHHHHHHHHhhhcCcCCC---CCHHHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          270 E---IPPIPSGLPPAVENVLLGCFEYDLRSR---PLMTDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       270 ~---~~~~p~~~s~~l~~Li~~cL~~dP~~R---Ps~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      .   .+..+..+++++++||.+||. +|.+|   |++++|++ .+.+..+|.....  ..+|+.|...
T Consensus       287 ~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~~--~~~p~~p~~~  351 (412)
T 2vd5_A          287 EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLRD--SVPPFTPDFE  351 (412)
T ss_dssp             HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTSTT--SCCSCCCC--
T ss_pred             cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHHhh--cCCCCCCcCC
Confidence            2   233446899999999999999 99998   58999998 7778889998753  4566666543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.6e-44  Score=384.34  Aligned_cols=278  Identities=19%  Similarity=0.274  Sum_probs=227.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++      +.||+|+++.....   ....+..+.  .+++.++||||+++
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~------~~~AiK~~~~~~~~~~~~~~~~~~E~--~il~~l~hp~Iv~l   80 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTK------KMYAMKYMNKQKCVERNEVRNVFKEL--QIMQGLEHPFLVNL   80 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHTCCCTTBCCE
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEehhhcccHHHHHHHHHHH--HHHHhCCCCCCCcE
Confidence            45577899999999999999999999987665      48999999753311   122222222  35667799999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+.+|+||||+.| +|.+.+.  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        81 ~~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~D  158 (384)
T 4fr4_A           81 WYSFQDEEDMFMVVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITD  158 (384)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEec
Confidence            9999999999999999985 5555554  456899999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHh
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVR  267 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---~~~ei~~~i~~  267 (620)
                      ||+++.+..    .......+||+.|+|||++.+.....++.++|||||||++|||++|..||...   ...++...+..
T Consensus       159 FG~a~~~~~----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~  234 (384)
T 4fr4_A          159 FNIAAMLPR----ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET  234 (384)
T ss_dssp             CTTCEECCT----TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH
T ss_pred             cceeeeccC----CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh
Confidence            999987642    23345678999999999997544456899999999999999999999999753   34455555433


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCC-HHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL-MTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs-~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                        ....+|..+++++.+||.+||+.||.+||+ ++++++ .+....+|.........+|+.|.
T Consensus       235 --~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~  295 (384)
T 4fr4_A          235 --TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPN  295 (384)
T ss_dssp             --CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHHHHHTTCSCCCCCCS
T ss_pred             --cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHHHHHhCCCCCCCCCC
Confidence              345578889999999999999999999998 888887 67778888887777777777765

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.2e-43  Score=371.90  Aligned_cols=248  Identities=23%  Similarity=0.367  Sum_probs=211.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|++.+.||+|+||.||+|++..++      +.||||++......  ....+.++.  .+++.++||||+++++++.
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpnIv~l~~~~~   84 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTG------REVAIKIIDKTQLNPTSLQKLFREV--RIMKILNHPNIVKLFEVIE   84 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHH--HHHHHCCCTTBCCEEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEhhcCCHHHHHHHHHHH--HHHHhCCCCCEeeEEEEEE
Confidence            3568999999999999999999987665      47999999765432  222232222  3567778999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+.+|+||||++ |+|.+.+..  .+++++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        85 ~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           85 TEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             ECCEEEEEEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence            9999999999997 577777753  4679999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      ....    .......+||+.|+|||++.+.   .+ +.++|||||||++|+|++|..||.+.+..++...+....  ..+
T Consensus       163 ~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~  233 (328)
T 3fe3_A          163 EFTV----GGKLDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRI  233 (328)
T ss_dssp             GGSS----SCGGGTTSSSGGGCCHHHHHTC---CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCC
T ss_pred             ecCC----CCccccccCCcceeCcccccCC---CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCC
Confidence            7642    2234556899999999999754   34 478999999999999999999999999999888887654  346


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |..+++++.+||.+||..||.+|||++++++
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            7789999999999999999999999999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=8.2e-44  Score=373.76  Aligned_cols=268  Identities=20%  Similarity=0.290  Sum_probs=219.5

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|++.+.||+|+||.||+|.+..+++   .+..||||+++..........+.++. .+++.++||||+++++
T Consensus        42 ~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~  117 (325)
T 3kul_A           42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ---RDVPVAIKALKAGYTERQRRDFLSEA-SIMGQFDHPNIIRLEG  117 (325)
T ss_dssp             -CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTS---CCEEEEEEEECTTCCHHHHHHHHHHH-HHHTTCCCTTBCCEEE
T ss_pred             hccccChhHeEEeeEEEeCCCcEEEEEEEecCCC---CCceEEEEecCCCCCHHHHHHHHHHH-HHHHhCCCCCCCcEEE
Confidence            4556888999999999999999999999876553   34579999998754443333333333 3566779999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..++..||||||++| +|.+++. .....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  196 (325)
T 3kul_A          118 VVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG  196 (325)
T ss_dssp             EECGGGCCEEEEECCTTCBHHHHHH-TTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEEeCCccEEEeeCCCCCcHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC
Confidence            99988899999999985 6666654 355689999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++................+|+.|+|||++.+.   .++.++||||||+++|+|++ |..||.+....++...+... ..
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-~~  272 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR---TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YR  272 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-CC
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcCC---CCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CC
Confidence            998775432222223344578899999998643   68889999999999999999 99999999998888877655 34


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+..+++++.+||.+||..||++||++.++++.|+..
T Consensus       273 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            556788999999999999999999999999999988764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.7e-43  Score=376.95  Aligned_cols=271  Identities=18%  Similarity=0.275  Sum_probs=221.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCc-CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTE-DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~e-d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...+..++|++.+.||+|+||.||+|++....+ ....+..||||+++..........+.++..++..+.+||||+++++
T Consensus        75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  154 (370)
T 2psq_A           75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG  154 (370)
T ss_dssp             TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred             cccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            345777899999999999999999999865432 2245678999999876544333333334334444448999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF  178 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NI  178 (620)
                      ++...+.+|+||||++ |+|.+++....              ...+++..++.++.||+.||+|||+++|+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            9999999999999998 47777776432              24589999999999999999999999999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS  257 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~  257 (620)
                      |++.++.+||+|||+++....... ........||+.|||||++.+.   .++.++|||||||++|||++ |..||.+.+
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCT-TCTTTTTTSCGGGCCHHHHHTC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EECCCCCEEEccccCCcccCcccc-eecccCCCcccceECHhHhcCC---CCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            999999999999999987643221 1223345678999999998643   68999999999999999999 999999988


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..++...+... ..+..+..+++++.++|.+||+.||++||++.++++.|...
T Consensus       311 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          311 VEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             GGGHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            88888766544 45567889999999999999999999999999999987763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=4.4e-44  Score=391.98  Aligned_cols=276  Identities=19%  Similarity=0.299  Sum_probs=225.0

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||+++.....   ....+..+.  .+++.++||||++++
T Consensus       143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~l~  214 (446)
T 4ejn_A          143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATG------RYYAMKILKKEVIVAKDEVAHTLTEN--RVLQNSRHPFLTALK  214 (446)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHC---------------CCCCCSCTTSCCEE
T ss_pred             cCCChHHcEEeEEEeeCcCEEEEEEEEcCCC------CEEEEEEEEhhhhhhhHHHHHHHHHH--HHHHhCCCCeEeeEE
Confidence            3466789999999999999999999987665      48999999753211   111122221  245667899999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEec
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      +++...+.+||||||++| +|.+.+.  ....+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|
T Consensus       215 ~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~D  292 (446)
T 4ejn_A          215 YSFQTHDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD  292 (446)
T ss_dssp             EEEEETTEEEEEECCCSSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECC
T ss_pred             EEEeeCCEEEEEEeeCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEcc
Confidence            999999999999999985 6666664  34679999999999999999999998 9999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....   ........+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+.... 
T Consensus       293 FG~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-  365 (446)
T 4ejn_A          293 FGLCKEGIK---DGATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-  365 (446)
T ss_dssp             CCCCCTTCC--------CCSSSCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-
T ss_pred             CCCceeccC---CCcccccccCCccccCHhhcCCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC-
Confidence            999986432   12334557899999999998643   68999999999999999999999999999988888886553 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                       ..+|..+++++.+||.+||++||++||     +++++++ .+....+|........++|+.|..
T Consensus       366 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~  429 (446)
T 4ejn_A          366 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQV  429 (446)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSC
T ss_pred             -CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCC
Confidence             446788999999999999999999999     9999998 667777887777777777777654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4.8e-44  Score=411.70  Aligned_cols=279  Identities=21%  Similarity=0.296  Sum_probs=231.2

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++++.||+|+||.||+|++..++      +.||||++++...   ...... ..+..++....+|++|+.+
T Consensus       335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~------~~vAvK~l~~~~~~~~~~~~~~-~~E~~~l~~~~~~~~i~~l  407 (674)
T 3pfq_A          335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTD------ELYAVKILKKDVVIQDDDVECT-MVEKRVLALPGKPPFLTQL  407 (674)
T ss_dssp             -----CTTEEEEEESSBTTTBCEEEEEESSSC------CEEEEEEEEHHHHHHTTTTHHH-HHHHHHHTCTTCCTTBCCE
T ss_pred             cccccccceEEEEEEccCCCEEEEEEEECCCC------cEEEEEEEeccccccHHHHHHH-HHHHHHHHhccCCCeEEEE
Confidence            34477889999999999999999999987665      4799999975321   111222 2222234444589999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++.+.+.+||||||++ |+|.+.+..  .+.+++..++.|+.||+.||+|||+++|+||||||+||||+.++++||+|
T Consensus       408 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~D  485 (674)
T 3pfq_A          408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIAD  485 (674)
T ss_dssp             EEECBCSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECC
T ss_pred             EEEEEeCCEEEEEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEee
Confidence            999999999999999998 466666653  36799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....   ........+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..++++.|...  
T Consensus       486 FGla~~~~~---~~~~~~~~~GT~~Y~APE~l~~~---~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--  557 (674)
T 3pfq_A          486 FGMCKENIW---DGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--  557 (674)
T ss_dssp             CTTCEECCC---TTCCBCCCCSCSSSCCHHHHTCC---CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS--
T ss_pred             cceeecccc---CCcccccccCCCcccCHhhhcCC---CCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--
Confidence            999986432   12234567899999999999644   6899999999999999999999999999999999988754  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCCcc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSGYT  330 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~~  330 (620)
                      ...+|..+++++.+||.+||++||++||++     ++|++ .+++..+|.....+...+|+.|...
T Consensus       558 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~  623 (674)
T 3pfq_A          558 NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKAS  623 (674)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCC
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCC
Confidence            345788999999999999999999999987     88887 6788899999988888888888644

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3e-43  Score=364.61  Aligned_cols=249  Identities=19%  Similarity=0.311  Sum_probs=208.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||+|+||.||+|.+..++      +.||||++..........+.++.  .+++..+||||+++++++..++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIINEI--LVMRENKNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTC------CEEEEEEEEGGGCSCHHHHHHHH--HHHHHCCCTTBCCEEEEEEETT
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCC------cEEEEEEeecccccHHHHHHHHH--HHHhcCCCCCCCeEeEEEEECC
Confidence            467999999999999999999976555      48999999765544433333333  3566689999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|+||||++ |+|.+.+..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            9999999997 566666543   468999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~  277 (620)
                      ..   ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+.... .....+..
T Consensus       168 ~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (297)
T 3fxz_A          168 PE---QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK  241 (297)
T ss_dssp             ST---TCCBCCCCSCGGGCCHHHHHCS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGG
T ss_pred             Cc---ccccCCccCCcCccChhhhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccc
Confidence            32   2233456899999999999754   68899999999999999999999999988777666555443 33445678


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++.+.+||.+||+.||++||++.++++
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999999999999999999999999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=5.1e-43  Score=365.37  Aligned_cols=261  Identities=24%  Similarity=0.344  Sum_probs=208.6

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ....|..++|++.++||+|+||.||+|++.        +..||||++.......  ...+..+.  .+++.++||||+++
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~   99 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH--------GSDVAVKILMEQDFHAERVNEFLREV--AIMKRLRHPNIVLF   99 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEET--------TEEEEEEEECCCCCSHHHHHHHHHHH--HHHHHCCCTTBCCE
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEEC--------CCcEEEEEecCCCCCHHHHHHHHHHH--HHHHhCCCCCEeeE
Confidence            355688899999999999999999999753        2479999997654322  22333322  35566789999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEccCCcEE
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~~~~vk  187 (620)
                      ++++...+..|+||||++| +|.+.+.... ...+++..++.++.||+.||+|||+++  |+||||||+|||++.++.+|
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~k  179 (309)
T 3p86_A          100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVK  179 (309)
T ss_dssp             EEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEE
T ss_pred             EEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEE
Confidence            9999999999999999985 6766665311 123899999999999999999999999  99999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||+++.....   ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       180 L~Dfg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~  253 (309)
T 3p86_A          180 VCDFGLSRLKAST---FLSSKSAAGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF  253 (309)
T ss_dssp             ECCCC--------------------CCTTSCHHHHTTC---CCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH
T ss_pred             ECCCCCCcccccc---ccccccCCCCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            9999999765321   1223456799999999999754   678899999999999999999999999999888888776


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ......++..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       254 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          254 KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            7777788899999999999999999999999999999988764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.1e-42  Score=358.13  Aligned_cols=251  Identities=20%  Similarity=0.296  Sum_probs=206.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||+|++..++      +.||||+++......  ...+.++.  .+++.++|+||+++++++..+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~   73 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALREI--CLLKELKHKNIVRLHDVLHSD   73 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEESSCSSTTHHHHHHHHH--HHHTTCCCTTBCCEEEEEEET
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCC------ceEEEEeeeccCCcCCcchHHHHHH--HHHhcCCCCCEeeEEeEEEeC
Confidence            68999999999999999999987665      489999997654322  22222222  356777999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+||||||++|++++.+.. ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        74 ~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A           74 KKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             TEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CEEEEEEecCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            99999999999999888765 45789999999999999999999999999999999999999999999999999998763


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHhccCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVRRQEIP-----  272 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P-f~~~~~~ei~~~i~~~~~~~-----  272 (620)
                      .   .........||+.|+|||++.+.  ..++.++|+|||||++|+|++|..| |.+.+..+.+..+......+     
T Consensus       153 ~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~  227 (292)
T 3o0g_A          153 I---PVRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW  227 (292)
T ss_dssp             S---CCSCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred             C---ccccccCCccccCCcChHHHcCC--CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhh
Confidence            2   22334456899999999998643  2478999999999999999988777 66666666666665422211     


Q ss_pred             ----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ----------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                            .....+++++++||.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                                  122357899999999999999999999999997

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-42  Score=371.41  Aligned_cols=275  Identities=20%  Similarity=0.279  Sum_probs=226.5

Q ss_pred             CCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCcee
Q 007046           31 SNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        31 s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      +......+..++|++.+.||+|+||.||+|++..+.++ ...+..||||+++............++..++..+.+||||+
T Consensus        59 ~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv  138 (382)
T 3tt0_A           59 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII  138 (382)
T ss_dssp             CCCTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhh
Confidence            34455678889999999999999999999998765432 23557899999987654443333344444455555999999


Q ss_pred             EeEEEEEECCEEEEEEecCCC-ChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeeccc
Q 007046          110 WLQGISVINGKICIIMKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLK  174 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLK  174 (620)
                      ++++++..++..||||||++| +|.+.+....              ...+++..++.++.||+.||+|||+++|+|||||
T Consensus       139 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             hheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            999999999999999999985 7777776533              2459999999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 007046          175 PFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPR  253 (620)
Q Consensus       175 P~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf  253 (620)
                      |+|||++.++.+||+|||+++...... .........||+.|+|||++.+.   .++.++|||||||++|+|++ |..||
T Consensus       219 p~NIll~~~~~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~ellt~g~~p~  294 (382)
T 3tt0_A          219 ARNVLVTEDNVMKIADFGLARDIHHID-YYKKTTNGRLPVKWMAPEALFDR---IYTHQSDVWSFGVLLWEIFTLGGSPY  294 (382)
T ss_dssp             GGGEEECTTCCEEECSCSCCCCSSCCC-TTCCCTTCCCGGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cceEEEcCCCcEEEcccCccccccccc-ccccccCCCCCcceeCHHHhcCC---CCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999998764321 11233445688999999998643   68999999999999999999 99999


Q ss_pred             CCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          254 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       254 ~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+.+..++...+... .....+..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       295 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          295 PGVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             TTCCHHHHHHHHHTT-CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999988888777544 35556888999999999999999999999999999988764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=7.7e-43  Score=357.31  Aligned_cols=260  Identities=21%  Similarity=0.290  Sum_probs=202.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|.+..++      +.||||+++..................++..+||||+++++++
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~   75 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSG------QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL   75 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCC------eEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee
Confidence            3577889999999999999999999986655      5899999976544333333333333457778999999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ..++..|+||||++|++.+.+...  ....+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T 3fme_A           76 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG  155 (290)
T ss_dssp             ECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred             eccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC
Confidence            999999999999999888877543  457899999999999999999999998 99999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCC-CCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhccC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQE  270 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-~~~~~s~~sDVwSlGvil~elltG~~Pf~~-~~~~ei~~~i~~~~~  270 (620)
                      +++.....    .......||+.|+|||.+... ....++.++|+||||+++|+|++|..||.. ...............
T Consensus       156 ~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  231 (290)
T 3fme_A          156 ISGYLVDD----VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS  231 (290)
T ss_dssp             ------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred             Cccccccc----ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC
Confidence            99876431    222334799999999997422 234688999999999999999999999986 344444555554444


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+..+++++.++|.+||+.||++||++.++++
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            44445679999999999999999999999999987

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.5e-43  Score=361.98  Aligned_cols=258  Identities=19%  Similarity=0.263  Sum_probs=204.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--------------------------
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--------------------------   88 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--------------------------   88 (620)
                      ...+..++|++.+.||+|+||.||+|++..++      +.||||+++.......                          
T Consensus         7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (298)
T 2zv2_A            7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDN------TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI   80 (298)
T ss_dssp             ---CEETTEEEEEEEEC--CCEEEEEEETTTT------EEEEEEEEECC-------------------------------
T ss_pred             CCceeecceEEEeEEeecCCEEEEEEEECCCC------cEEEEEEeehhhhhhhcccccccccccccccccccccccchH
Confidence            44466789999999999999999999976655      5899999976542111                          


Q ss_pred             HHHHHHHHHHHHHccCCCceeEeEEEEEE--CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 007046           89 RVLLERLNDLFLKCQGVEGICWLQGISVI--NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK  166 (620)
Q Consensus        89 ~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~  166 (620)
                      ..+.++.  .+++.++||||+++++++..  .+.+|+||||++|+.+..+.  ...++++..+..++.||+.||+|||++
T Consensus        81 ~~~~~E~--~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~  156 (298)
T 2zv2_A           81 EQVYQEI--AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLHYQ  156 (298)
T ss_dssp             CHHHHHH--HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH--HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            1122222  35667799999999999986  57899999999854333322  456899999999999999999999999


Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHH
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM  246 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~el  246 (620)
                      +|+||||||+|||++.++.+||+|||+++.....   ........||+.|+|||.+.+.....++.++|+|||||++|+|
T Consensus       157 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l  233 (298)
T 2zv2_A          157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS---DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF  233 (298)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEECSSS---SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHH
T ss_pred             CeeccCCCHHHEEECCCCCEEEecCCCccccccc---cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHH
Confidence            9999999999999999999999999999876432   1223445799999999998754222247789999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          247 LTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       247 ltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++|..||.+.....+...+.......+....+++++.++|.+||+.||++||++.++++
T Consensus       234 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          234 VFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            99999999988888877776655444445679999999999999999999999999986

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.5e-42  Score=361.72  Aligned_cols=253  Identities=22%  Similarity=0.265  Sum_probs=202.1

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      -.++|++.++||+|+||.||+|++..       ++.||+|++....... ......++. .+++.++||||+++++++..
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~   90 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-------GRIVALKRIRLDAEDEGIPSTAIREI-SLLKELHHPNIVSLIDVIHS   90 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETT-------SCEEEEEEEC------CHHHHHHHHH-HHHHHCCCTTBCCEEEEECC
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECC-------CCEEEEEEEecccccchhhHHHHHHH-HHHHHcCCCCEeeeeeEEcc
Confidence            35789999999999999999998742       3579999997544322 112222222 35566789999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++.+||||||++|++.+.+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        91 ~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           91 ERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             SSCEEEEEECCSEEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             CCEEEEEEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence            999999999999998888864 4567999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----  273 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~----  273 (620)
                      ..   .........||+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+.+..+......+.    
T Consensus       170 ~~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  244 (311)
T 3niz_A          170 GI---PVRSYTHEVVTLWYRAPDVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW  244 (311)
T ss_dssp             TS---CCC---CCCCCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTS
T ss_pred             CC---CcccccCCcccCCcCCHHHhcCC--CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHh
Confidence            32   12333456799999999998642  3588999999999999999999999998776666655543221111    


Q ss_pred             ------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              +...+++++.+||.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             GGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                                    12357889999999999999999999999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.5e-43  Score=370.05  Aligned_cols=270  Identities=20%  Similarity=0.311  Sum_probs=217.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|++.... +...++.||||+++............++..++..+.+||||++++++
T Consensus        16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~   94 (359)
T 3vhe_A           16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGID-KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   94 (359)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSS-STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccccccceeeceeecCCCCceEEEEEecccc-ccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence            34577899999999999999999999976543 23456799999998755444433344444455566689999999999


Q ss_pred             EEECC-EEEEEEecCCC-ChHHHHHHhcC---------------------------------------------------
Q 007046          115 SVING-KICIIMKFYEG-SVGDRMAQLKG---------------------------------------------------  141 (620)
Q Consensus       115 ~~~~~-~~~IVmE~~~G-sLld~l~~~~~---------------------------------------------------  141 (620)
                      +...+ .+|+||||++| +|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            88754 49999999985 77777654221                                                   


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCC
Q 007046          142 -------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP  208 (620)
Q Consensus       142 -------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~  208 (620)
                                   ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ......
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~~~~  253 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKG  253 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT-TCEEC-
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc-cchhcc
Confidence                         128999999999999999999999999999999999999999999999999998663321 112233


Q ss_pred             CcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHH
Q 007046          209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL  287 (620)
Q Consensus       209 ~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~  287 (620)
                      ...||+.|+|||++.+.   .++.++|||||||++|||+| |..||.+....+..............+..+++++.+++.
T Consensus       254 ~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  330 (359)
T 3vhe_A          254 DARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML  330 (359)
T ss_dssp             -CEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCCceeEChhhhcCC---CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            45789999999998643   68899999999999999999 999999877655555555555566778899999999999


Q ss_pred             HhhhcCcCCCCCHHHHHHHHHh
Q 007046          288 GCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       288 ~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +||+.||++||++.++++.|+.
T Consensus       331 ~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          331 DCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHccCChhhCCCHHHHHHHHHH
Confidence            9999999999999999998765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.6e-42  Score=366.55  Aligned_cols=249  Identities=20%  Similarity=0.284  Sum_probs=211.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +.|++.+.||+|+||.||+|++..++      +.||||++.......   ...+.++.  .+++.++||||+++++++..
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~~~~  125 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKEV--RFLQKLRHPNTIQYRGCYLR  125 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEESCSSCHHHHHHHHHHHH--HHHHHCCCTTBCCEEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCC------eEEEEEEEccccccchHHHHHHHHHH--HHHHhCCCCCEeeEEEEEEE
Confidence            45999999999999999999976554      589999997643322   22222222  25566799999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++..||||||+.|++.+.+.. ...++++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  204 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             CCeEEEEEecCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence            999999999999999888864 4568999999999999999999999999999999999999999999999999999765


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..       .....||+.|+|||++.+...+.++.++|||||||++|||++|..||.+.+..+.+..+.........+..
T Consensus       205 ~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  277 (348)
T 1u5q_A          205 AP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH  277 (348)
T ss_dssp             SS-------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTT
T ss_pred             CC-------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Confidence            32       23457999999999986433457899999999999999999999999998887777777666555555678


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++++.+||.+||+.||++||++.++++
T Consensus       278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          278 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            9999999999999999999999999997

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.6e-43  Score=363.91  Aligned_cols=258  Identities=20%  Similarity=0.348  Sum_probs=207.4

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+.+++|++.+.||+|+||.||+|.+..++      +.||+|++..........+..+.  .+++.++||||+++++++
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~------~~va~K~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~~~~~   76 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETG------EVMVMKELIRFDEETQRTFLKEV--KVMRCLEHPNVLKFIGVL   76 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEESCCCHHHHHHHHHHH--HHHTTCCCTTBCCEEEEE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCC------cEEEEEEeccCCHHHHHHHHHHH--HHHHhCCCcCcccEEEEE
Confidence            4577899999999999999999999987665      48999999765554444444443  356777899999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..++..|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  155 (310)
T 3s95_A           77 YKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA  155 (310)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred             ecCCeeEEEEEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccc
Confidence            999999999999985 66666653 4678999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCC-----------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---
Q 007046          195 HLLLGIPLPS-----------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---  260 (620)
Q Consensus       195 ~~~~~~~~~~-----------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e---  260 (620)
                      +.........           .......||+.|+|||++.+.   .++.++||||||+++|+|++|..||.......   
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~  232 (310)
T 3s95_A          156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF  232 (310)
T ss_dssp             EECC--------------------CCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS
T ss_pred             eecccccccccccccccccccccccccCCCcceeCHHHhcCC---CCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH
Confidence            8764322111           111256799999999999753   68899999999999999999999986532211   


Q ss_pred             --HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          261 --IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       261 --i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                        .......    ...+..+++++.+++.+||+.||++||++.++++.|+.
T Consensus       233 ~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~  279 (310)
T 3s95_A          233 GLNVRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET  279 (310)
T ss_dssp             SBCHHHHHH----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhhcccc----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              1111111    12467889999999999999999999999999987765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.7e-42  Score=358.69  Aligned_cols=272  Identities=21%  Similarity=0.288  Sum_probs=220.5

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|++.+.||+|+||.||+|++.... +...++.||||+++..........+.++...+.++.+||||+++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   94 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG   94 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSS-STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeecc-ccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence            345578899999999999999999999975432 2345678999999876544433444444444445459999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKG----------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF  176 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~----------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~  176 (620)
                      ++..++..|+||||++| +|.+.+.....                ..+++..++.++.||+.||.|||+++|+||||||+
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  174 (313)
T 1t46_A           95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  174 (313)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence            99999999999999985 88777765332                25899999999999999999999999999999999


Q ss_pred             cEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 007046          177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG  255 (620)
Q Consensus       177 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~  255 (620)
                      |||++.++.+||+|||+++....... ........||+.|+|||.+.+.   .++.++|+||||+++|+|+| |..||.+
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~  250 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSN-YVVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPG  250 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTT-SEECSSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             eEEEcCCCCEEEcccccccccccccc-ceeccCCCCcceeeChHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            99999999999999999987643211 1122344678899999998643   68899999999999999999 9999988


Q ss_pred             CCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...................+..+++++.++|.+||+.||.+||++.++++.|++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          251 MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             CCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            7765555555555555666788999999999999999999999999999988763

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.4e-42  Score=357.03  Aligned_cols=255  Identities=18%  Similarity=0.256  Sum_probs=204.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-----HHHHHHHHHHH-HHHHccCCCceeEe
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-----RMRVLLERLND-LFLKCQGVEGICWL  111 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-----~~~~~~~~~~~-~~l~~~~h~nIv~l  111 (620)
                      +..++|++.++||+|+||.||+|++..++      +.||||+++.....     .......+... ..+...+||||+++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~   79 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSG------HFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL   79 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTC------CEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEe
Confidence            45679999999999999999999976555      48999998743211     00111111111 12333479999999


Q ss_pred             EEEEEECC-----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          112 QGISVING-----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       112 ~g~~~~~~-----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      ++++....     .+|+||||+.|+|.+.+.......+++..+..++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus        80 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             EEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCE
T ss_pred             eeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCE
Confidence            99998765     6899999999999998876555569999999999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~  266 (620)
                      ||+|||+++....    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.
T Consensus       160 kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  232 (308)
T 3g33_A          160 KLADFGLARIYSY----QMALTPVVVTLWYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF  232 (308)
T ss_dssp             EECSCSCTTTSTT----CCCSGGGGCCCSSCCHHHHHTS---CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHH
T ss_pred             EEeeCccccccCC----CcccCCccccccccCchHHcCC---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999986532    2233556899999999998643   68899999999999999999999999999888777776


Q ss_pred             hccCCCC-------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 RRQEIPP-------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~~~-------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....+.                         ....+++++.+||.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            5322211                         11357899999999999999999999999997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.6e-42  Score=356.44  Aligned_cols=250  Identities=20%  Similarity=0.283  Sum_probs=201.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|++ .++      +.||+|+++......  ...+.++.  .+++.++||||+++++++...
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~------~~~aiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~   72 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYG------ETFALKKIRLEKEDEGIPSTTIREI--SILKELKHSNIVKLYDVIHTK   72 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTS------CEEEEEEECCSSGGGCCCHHHHHHH--HGGGGCCCTTBCCEEEEEECS
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCC------CEEEEEEEeccccccccchhHHHHH--HHHHhcCCCCEeeeeeEEccC
Confidence            6899999999999999999987 322      479999997654322  12222222  356677999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||+++++.+.+.. ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        73 ~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A           73 KRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             SCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             CeEEEEEEecCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence            99999999999988888764 45779999999999999999999999999999999999999999999999999998763


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------  272 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~------  272 (620)
                      .   .........||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+..+......+      
T Consensus       152 ~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (288)
T 1ob3_A          152 I---PVRKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (288)
T ss_dssp             C------------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             c---cccccccccccccccCchheeCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhch
Confidence            2   12233445799999999998642  358899999999999999999999999988777666654421111      


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           .....+++++.+||.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                                 122468999999999999999999999999987

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=8.4e-43  Score=373.68  Aligned_cols=273  Identities=19%  Similarity=0.296  Sum_probs=208.0

Q ss_pred             ccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCce
Q 007046           29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI  108 (620)
Q Consensus        29 ~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nI  108 (620)
                      +........++.++|++.+.||+|+||.||+|++....   ..+..||||+++..........+.++. .++..++||||
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~ni  108 (373)
T 2qol_A           33 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPS---KKEISVAIKTLKVGYTEKQRRDFLGEA-SIMGQFDHPNI  108 (373)
T ss_dssp             --CTTTSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTT---SCBCCEEEEECCTTCCHHHHHHHHHHH-HHHTTCCCTTB
T ss_pred             HHHHHHHhhcCHhhceeeeEEeeCCCeEEEEEEEecCC---CCceeEEEEEecCccCHHHHHHHHHHH-HHHHhCCCCCC
Confidence            33344566788899999999999999999999876332   234579999998654433333333332 35667799999


Q ss_pred             eEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          109 CWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       109 v~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      +++++++...+..||||||++ |+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+|
T Consensus       109 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  187 (373)
T 2qol_A          109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCK  187 (373)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred             CeEEEEEeeCCceEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEE
Confidence            999999998889999999998 566666643 456799999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV  266 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~  266 (620)
                      |+|||+++................+|+.|+|||++.+.   .++.++||||||+++|||++ |..||...+..++...+.
T Consensus       188 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~  264 (373)
T 2qol_A          188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD  264 (373)
T ss_dssp             ECCC----------------------CTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH
T ss_pred             ECcCccccccccCCccceeccCCCcCCCccChhhhccC---CcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999998764322212222233568899999998643   68999999999999999998 999999999888888776


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ... ..+.+..++.++.++|.+||+.||++||++.++++.|...
T Consensus       265 ~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          265 EGY-RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             TTE-ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCC-CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            543 3445778999999999999999999999999999987764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4e-42  Score=377.29  Aligned_cols=250  Identities=20%  Similarity=0.285  Sum_probs=208.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|++....... ....+.++. .+++.++||||+++++++..++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~------~~~a~K~i~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAG------QEYAAMIINTKKLSARDHQKLEREA-RICRLLKHPNIVRLHDSISEEG   83 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTT------EEEEEEEEESCSCHHHHHHHHHHHH-HHHHHCCBTTBCCEEEEEECSS
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCC------cEEEEEEEEcccCCHHHHHHHHHHH-HHHHhCCCcCCCeEEEEEEECC
Confidence            57999999999999999999987665      489999998655332 222223333 3566679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc---cCCcEEEeccCCcc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGIPH  195 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld---~~~~vkL~DFGla~  195 (620)
                      ..|||||||+| +|.+.+.  ....+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++
T Consensus        84 ~~~lv~E~~~gg~L~~~i~--~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            99999999984 7777776  356799999999999999999999999999999999999998   45789999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC-
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI-  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~-  274 (620)
                      .....   .......+||+.|||||++.+.   .++.++|||||||++|+|++|.+||.+.+..+++..+.......+. 
T Consensus       162 ~~~~~---~~~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  235 (444)
T 3soa_A          162 EVEGE---QQAWFGFAGTPGYLSPEVLRKD---PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP  235 (444)
T ss_dssp             CCCTT---CCBCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             EecCC---CceeecccCCcccCCHHHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcc
Confidence            76432   2233456899999999998643   6889999999999999999999999999999999888776544332 


Q ss_pred             -CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 -PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 -p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ...+++++.+||.+||+.||++||++.++++
T Consensus       236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          236 EWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             2578999999999999999999999999998

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8.4e-43  Score=352.64  Aligned_cols=259  Identities=20%  Similarity=0.273  Sum_probs=217.0

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...++.++|++.+.||+|+||.||+|++.        +..||||+++...... ......++. .+++.++||||+++++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--------~~~~avK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~   74 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQ--------GNDIVVKVLKVRDWSTRKSRDFNEEC-PRLRIFSHPNVLPVLG   74 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEET--------TEEEEEEEECCTTCCHHHHHHHHHHG-GGGCCCSCTTEECEEE
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEEC--------CeeEEEEEecccccCHHHHHHHHHHH-HHHHhcCCCchhheEE
Confidence            45678899999999999999999999874        2479999998654322 122222222 2556678999999999


Q ss_pred             EEEEC--CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEccCCcEEE
Q 007046          114 ISVIN--GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       114 ~~~~~--~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~~~~vkL  188 (620)
                      ++...  +..++||||++ |+|.+.+.......+++..++.++.||+.||.|||+++  |+||||||+|||++.++.++|
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l  154 (271)
T 3kmu_A           75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI  154 (271)
T ss_dssp             EECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEE
T ss_pred             EEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeE
Confidence            99876  77899999998 57877776533346999999999999999999999999  999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||++...        ......||+.|+|||.+.+.....++.++||||||+++|+|++|..||.+.+..+....+...
T Consensus       155 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  226 (271)
T 3kmu_A          155 SMADVKFSF--------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE  226 (271)
T ss_dssp             EGGGSCCTT--------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS
T ss_pred             Eeccceeee--------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc
Confidence            998876543        223457899999999997654444556899999999999999999999999988888888777


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+.++..+++++.++|.+||+.||++||++.++++.|...
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          227 GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            777888999999999999999999999999999999988764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3.9e-42  Score=367.05  Aligned_cols=249  Identities=20%  Similarity=0.283  Sum_probs=208.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++...... ....+.++. .+++.++||||+++++++..++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~~~~~~~~~~  101 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARDFQKLEREA-RICRKLQHPNIVRLHDSIQEES  101 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCC------CEEEEEEEEcccCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEEeCC
Confidence            57999999999999999999987665      489999997654322 222222332 3556679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cEEEeccCCcc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPH  195 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~vkL~DFGla~  195 (620)
                      ..|+||||++| +|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++   .+||+|||+++
T Consensus       102 ~~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          102 FHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEEEEECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEEEEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            99999999985 6767765  456799999999999999999999999999999999999998654   59999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      ....    .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+++..+.......+.+
T Consensus       180 ~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  252 (362)
T 2bdw_A          180 EVND----SEAWHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP  252 (362)
T ss_dssp             CCTT----CCSCCCSCSCTTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             EecC----CcccccCCCCccccCHHHHccC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence            7642    2233456899999999998643   68899999999999999999999999999888888887665433222


Q ss_pred             --CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 --SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 --~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        ..+++++.+||.+||..||++||++.++++
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              468999999999999999999999999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.9e-42  Score=363.54  Aligned_cols=264  Identities=22%  Similarity=0.256  Sum_probs=203.5

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .....++|++.++||+|+||.||+|++..++      +.||||+++....... .....++. .+++.++|+||++++++
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~  101 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTN------ETVAIKRIRLEHEEEGVPGTAIREV-SLLKELQHRNIIELKSV  101 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTT------EEEEEEECCCCC--------CHHHH-HHGGGCCCTTBCCEEEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCC------ceEEEEEEcccccccccchhHHHHH-HHHHHcCCCCcceEEEE
Confidence            3455678999999999999999999976655      5899999976543321 11112222 35667799999999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc-----cCCcEEEe
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-----EADRAVLG  189 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld-----~~~~vkL~  189 (620)
                      +..++.+||||||++|+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++     .++.+||+
T Consensus       102 ~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~  179 (329)
T 3gbz_A          102 IHHNHRLHLIFEYAENDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG  179 (329)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred             EecCCEEEEEEecCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEEC
Confidence            99999999999999999888886  355799999999999999999999999999999999999994     44569999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++....   .........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus       180 Dfg~a~~~~~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~  254 (329)
T 3gbz_A          180 DFGLARAFGI---PIRQFTHEIITLWYRPPEILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL  254 (329)
T ss_dssp             CTTHHHHHC--------------CCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             cCCCccccCC---cccccCCCcCCccccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh
Confidence            9999987632   12233456789999999998642  248899999999999999999999999988877776665443


Q ss_pred             CCCCCC----------------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCC
Q 007046          270 EIPPIP----------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGW  313 (620)
Q Consensus       270 ~~~~~p----------------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~  313 (620)
                      ..+...                            ..+++++.+||.+||+.||++||++.++++ .+.+..+|
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             CCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence            222110                            116899999999999999999999999998 44444444

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.1e-42  Score=367.22  Aligned_cols=249  Identities=20%  Similarity=0.293  Sum_probs=209.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH------HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR------MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~------~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||+|+++......      ...+..+.  .+++.++||||+++++
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~~~~~~E~--~il~~l~hpnIv~l~~   82 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTG------LEYAAKFIKKRQSRASRRGVCREEIEREV--SILRQVLHPNIITLHD   82 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHHHHHHH--HHHTTCCCTTBCCEEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCC------CEEEEEEEEccccccccchhHHHHHHHHH--HHHHhCCCcCCCcEEE
Confidence            367999999999999999999987665      489999997654321      22233322  3566778999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVL  188 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL  188 (620)
                      ++...+.+||||||++ |+|.+.+.  ..+.+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           83 VYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            9999999999999997 57777764  456899999999999999999999999999999999999998877    7999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++....    .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+...
T Consensus       161 ~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~  233 (361)
T 2yab_A          161 IDFGLAHEIED----GVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV  233 (361)
T ss_dssp             CCCSSCEECCT----TCCCCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT
T ss_pred             EecCCceEcCC----CCccccCCCCccEECchHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            99999987643    2234456899999999998643   6889999999999999999999999999999988888765


Q ss_pred             cCCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....  ..+..+++++++||.+||..||++||++.++++
T Consensus       234 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          234 SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4322  123678999999999999999999999999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.7e-42  Score=359.54  Aligned_cols=247  Identities=22%  Similarity=0.269  Sum_probs=200.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH-HHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-VLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~-~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.++||+|+||+||+|.+..++      +.||||++......... .....+...+....+|+||+++++++..++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDG------RLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTS------CEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEECCCC------eEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            67999999999999999999987655      48999998764332221 112222223556669999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+||||||+.|+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus       131 ~~~lv~e~~~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          131 ILYLQTELCGPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EEEEEEECCCCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             EEEEEEeccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999999999998888765 456799999999999999999999999999999999999999999999999999877632


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                          ........||+.|+|||++.+    .++.++|||||||++|||++|..|+.+.   +....+......+.++..++
T Consensus       210 ----~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~  278 (311)
T 3p1a_A          210 ----AGAGEVQEGDPRYMAPELLQG----SYGTAADVFSLGLTILEVACNMELPHGG---EGWQQLRQGYLPPEFTAGLS  278 (311)
T ss_dssp             ---------CCCCCGGGCCGGGGGT----CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCCCHHHHTTSC
T ss_pred             ----CCCCcccCCCccccCHhHhcC----CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCCCcccccCCC
Confidence                122334579999999999853    5889999999999999999997766543   23333433444444567899


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++.++|.+||+.||++||++.++++
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            99999999999999999999999997

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3e-42  Score=352.81  Aligned_cols=264  Identities=22%  Similarity=0.349  Sum_probs=205.3

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|++.+.||+|+||.||+|.+..++.   .+..||+|.++..........+.++. ..++.++||||+++++
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~   83 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PALAVAIKTCKNCTSDSVREKFLQEA-LTMRQFDHPHIVKLIG   83 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC-----CCEEEEEEECTTTTSHHHHHHHHHHH-HHHHTCCCTTBCCEEE
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCC---CceEEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCccceEEE
Confidence            3456788999999999999999999999865432   34679999997654443333333333 3566679999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++. ++..|+||||++| +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        84 ~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  161 (281)
T 1mp8_A           84 VIT-ENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG  161 (281)
T ss_dssp             EEC-SSSCEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--
T ss_pred             EEc-cCccEEEEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccc
Confidence            974 5678999999995 66666653 45679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++......  ........+|+.|+|||.+.+.   .++.++|+||||+++|||++ |..||.+.+..++...+.... .
T Consensus       162 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~-~  235 (281)
T 1mp8_A          162 LSRYMEDST--YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-R  235 (281)
T ss_dssp             -------------------CCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-C
T ss_pred             cccccCccc--ccccccCCCcccccChhhcccC---CCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC-C
Confidence            998764321  1122334678899999998643   68899999999999999997 999999988888877776543 4


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+..+++++.++|.+||+.||++||++.++++.|..
T Consensus       236 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          236 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            55788999999999999999999999999999997765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9.6e-42  Score=352.53  Aligned_cols=259  Identities=21%  Similarity=0.302  Sum_probs=205.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      +-.++|++.+.||+|+||.||+|++..++      +.||+|++........  ...+.++. ..+..++||||+++++++
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILN------IKVAIKAIFIPPREKEETLKRFEREV-HNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTC------SEEEEEEEECCSSCCHHHHHHHHHHH-HHHTTCCBTTBCCEEEEE
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCC------CeEEEEEeccCccccHHHHHHHHHHH-HHHhcCCCCCCceEEEee
Confidence            34578999999999999999999976655      4799999865432221  12222222 356677999999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..++.+|+||||++| +|.+++..  .+++++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  158 (294)
T 4eqm_A           81 EEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA  158 (294)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred             eeCCeEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence            999999999999985 66666653  457999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--  272 (620)
                      +......  ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|+.||.+.+..+............  
T Consensus       159 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  233 (294)
T 4eqm_A          159 KALSETS--LTQTNHVLGTVQYFSPEQAKGE---ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVT  233 (294)
T ss_dssp             TTC---------------CCSSCCHHHHHTC---CCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHH
T ss_pred             ccccccc--ccccCccccCccccCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcc
Confidence            8763221  1223345799999999999754   67889999999999999999999999988777655554433221  


Q ss_pred             -CCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhC
Q 007046          273 -PIPSGLPPAVENVLLGCFEYDLRSRP-LMTDILRVFKSD  310 (620)
Q Consensus       273 -~~p~~~s~~l~~Li~~cL~~dP~~RP-s~~eil~~L~~~  310 (620)
                       ..+..+|+.+.++|.+||+.||.+|| +++++.+.|...
T Consensus       234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence             24567999999999999999999999 888898888764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.3e-43  Score=372.09  Aligned_cols=249  Identities=23%  Similarity=0.347  Sum_probs=206.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++........  .....++. .+++.++||||+++++++..
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~   80 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQ------QKVALKFISRQLLKKSDMHMRVEREI-SYLKLLRHPHIIKLYDVITT   80 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCSHHHHHHH-HHHTTCCCTTBCCEEEEEEC
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEehHHccchhHHHHHHHHH-HHHHhCCCCCCCeEEEEEEe
Confidence            468999999999999999999987665      4899999975322111  11122222 35677899999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      .+.+|+||||++|++.+.+..  .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~lv~E~~~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           81 PTDIVMVIEYAGGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             SSEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             CCEEEEEEECCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            999999999999999998864  467999999999999999999999999999999999999999999999999999866


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ..    .......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+....++...+.  .....+|..
T Consensus       159 ~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~  230 (336)
T 3h4j_B          159 TD----GNFLKTSCGSPNYAAPEVINGKL--YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN--SCVYVMPDF  230 (336)
T ss_dssp             TT----SBTTCCCTTSTTTSCGGGSCCSG--GGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC--SSCCCCCTT
T ss_pred             cC----CcccccccCCcCcCCHHHHcCCC--CCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCccc
Confidence            43    22334568999999999987541  13679999999999999999999998766555444332  223456788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++++.+||.+||..||.+|||+.++++
T Consensus       231 ~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          231 LSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            9999999999999999999999999997

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.8e-42  Score=350.02  Aligned_cols=254  Identities=25%  Similarity=0.379  Sum_probs=201.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH---HHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR---VLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~---~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .++.++|++.+.||+|+||.||+|.+.        +..||||+++........   ....++. .+++.++||||+++++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~   73 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI--------GDEVAVKAARHDPDEDISQTIENVRQEA-KLFAMLKHPNIIALRG   73 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET--------TEEEEEEEC----------CHHHHHHHH-HHHHHCCCTTBCCEEE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc--------CCeEEEEEEecCCcccHHHHHHHHHHHH-HHHHhcCCCCEeeEEE
Confidence            467889999999999999999999864        247999999764432211   1122222 3566678999999999


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeecccCCcEEEcc--------
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG---ILVLNLKPFNFILNE--------  182 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g---IiHrDLKP~NILld~--------  182 (620)
                      ++..++..|+||||++|+.++.+.  ...++++..++.++.||+.||.|||+++   |+||||||+|||++.        
T Consensus        74 ~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~  151 (271)
T 3dtc_A           74 VCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS  151 (271)
T ss_dssp             EECCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred             EEecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence            999999999999999865444443  4568999999999999999999999999   999999999999986        


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY  262 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~  262 (620)
                      ++.+||+|||+++....     .......||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+.....
T Consensus       152 ~~~~kl~Dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  223 (271)
T 3dtc_A          152 NKILKITDFGLAREWHR-----TTKMSAAGAYAWMAPEVIRAS---MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA  223 (271)
T ss_dssp             SCCEEECCCCC------------------CCGGGSCHHHHHHC---CCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH
T ss_pred             CcceEEccCCccccccc-----ccccCCCCccceeCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            67899999999986532     222345799999999998643   6889999999999999999999999999888888


Q ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       263 ~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+.........+..+++++.++|.+||+.||++||++.++++.|+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          224 YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            77777777777889999999999999999999999999999998864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.7e-42  Score=350.61  Aligned_cols=258  Identities=20%  Similarity=0.326  Sum_probs=214.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +..|++++|++.+.||+|+||.||+|.+...       ..||+|++....... ..+.++.  .+++.++||||++++++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~~~~   73 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMSE-EDFIEEA--EVMMKLSHPKLVQLYGV   73 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEETTT-------EEEEEEEECTTSBCH-HHHHHHH--HHHHTCCCTTBCCEEEE
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEecCC-------CeEEEEEecccccCH-HHHHHHH--HHHHhCCCCCEeeEEEE
Confidence            4568899999999999999999999987532       469999998655433 2233322  35666789999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +..++..|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        74 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  152 (269)
T 4hcu_A           74 CLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM  152 (269)
T ss_dssp             ECSSSSEEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTG
T ss_pred             EecCCceEEEEEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccc
Confidence            9998999999999985 55555543 556799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........||+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..++...+... ..+
T Consensus       153 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-~~~  226 (269)
T 4hcu_A          153 TRFVLDDQ--YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRL  226 (269)
T ss_dssp             GGGBCCHH--HHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCC
T ss_pred             cccccccc--cccccCcccccccCCHHHhcCC---CCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-ccC
Confidence            98653211  1122344678899999998643   68899999999999999999 99999999998888877654 345


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+..+++++.+++.+||+.||++||++.++++.|..
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            5677899999999999999999999999999998765

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.7e-42  Score=370.25  Aligned_cols=265  Identities=13%  Similarity=0.141  Sum_probs=206.7

Q ss_pred             CCCCCcCCCCeeEEeeeecc--CceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCcee
Q 007046           33 DTNAWIKPSALKLRHRIGRG--PFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G--~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      ..+...+.++|++.+.||+|  +||.||+|++..++      +.||||+++...... ....+.++. .+++.++||||+
T Consensus        17 ~s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv   89 (389)
T 3gni_B           17 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTG------EYVTVRRINLEACSNEMVTFLQGEL-HVSKLFNHPNIV   89 (389)
T ss_dssp             -CCCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHH-HHHHHCCCTTBC
T ss_pred             hhcccCCCCcEEEEecccCCcCCceEEEEEEEcCCC------CEEEEEEecccccChHHHHHHHHHH-HHHHhCCCCCCC
Confidence            34455677899999999999  99999999987665      489999997654322 222333333 356777999999


Q ss_pred             EeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          110 WLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      ++++++..++.+|||||||+ |+|.+++.......+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl  169 (389)
T 3gni_B           90 PYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL  169 (389)
T ss_dssp             CEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             cEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            99999999999999999998 57777776544577999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCC----CCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 007046          189 GDVGIPHLLLGIP----LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA  264 (620)
Q Consensus       189 ~DFGla~~~~~~~----~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~  264 (620)
                      +|||++.......    .........+||+.|+|||++.+. ...++.++|||||||++|||++|+.||.+.+..+.+..
T Consensus       170 ~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  248 (389)
T 3gni_B          170 SGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE  248 (389)
T ss_dssp             CCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTT-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH
T ss_pred             cccccceeeccccccccccccccccccccccccCHHHHhcc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            9999886553221    111223345799999999998752 23688999999999999999999999987665444333


Q ss_pred             HHhccC--------------------------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCH
Q 007046          265 VVRRQE--------------------------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLM  300 (620)
Q Consensus       265 i~~~~~--------------------------------------------~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~  300 (620)
                      +.....                                            ....+..+++++.+||.+||+.||++||++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta  328 (389)
T 3gni_B          249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA  328 (389)
T ss_dssp             C--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence            221110                                            012345688999999999999999999999


Q ss_pred             HHHHH
Q 007046          301 TDILR  305 (620)
Q Consensus       301 ~eil~  305 (620)
                      .++++
T Consensus       329 ~ell~  333 (389)
T 3gni_B          329 STLLN  333 (389)
T ss_dssp             HHHTT
T ss_pred             HHHhc
Confidence            99997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-42  Score=365.13  Aligned_cols=272  Identities=19%  Similarity=0.299  Sum_probs=217.3

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|++.+.||+|+||.||+|++..... ...+..||||+++..........+.++..++.++.+||||+++++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  116 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISK-TGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG  116 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSS-SSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeecccc-CCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            3556888999999999999999999999854332 235578999999765433333333334434444449999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeee
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKG---------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVL  171 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~---------------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHr  171 (620)
                      ++...+..|+||||++ |+|.+.+.....                     ..+++..++.++.||+.||+|||++||+||
T Consensus       117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  196 (344)
T 1rjb_A          117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  196 (344)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            9999999999999998 577777764321                     247999999999999999999999999999


Q ss_pred             cccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CC
Q 007046          172 NLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GV  250 (620)
Q Consensus       172 DLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~  250 (620)
                      ||||+|||++.++.+||+|||+++...... .........||+.|+|||.+.+.   .++.++||||||+++|+|+| |.
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~  272 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLFEG---IYTIKSDVWSYGILLWEIFSLGV  272 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCc-cceeccCccCccCccCHHHhccC---CCChhHhHHHHHHHHHHHHcCCC
Confidence            999999999999999999999998764321 11112344678899999998643   68999999999999999998 99


Q ss_pred             CCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       251 ~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .||.+....+.+..+......+..+..+++++.+||.+||..||++||++.++++.|...
T Consensus       273 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          273 NPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             CSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            999987766655556556566677888999999999999999999999999999988874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.6e-42  Score=357.39  Aligned_cols=272  Identities=19%  Similarity=0.284  Sum_probs=221.6

Q ss_pred             CCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           32 NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        32 ~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      +.+...+..++|++.+.||+|+||.||+|++..... ...+..||||+++..........+.++. .+++.++||||+++
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~   91 (314)
T 2ivs_A           14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKG-RAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQVNHPHVIKL   91 (314)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGG-CSSEEEEEEEECCTTCCHHHHHHHHHHH-HHHTTCCCTTBCCE
T ss_pred             CCcccccchhheeeeeeecccCCeeEEEEEEeccCc-ccCcceEEEEeccCCCCHHHHHHHHHHH-HHHhhCCCCceeeE
Confidence            345667888999999999999999999999865432 2355789999998654433322233332 35666799999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKG----------------------GKLSLSNVFRYAIDLAQGILQLHSKGI  168 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~----------------------~~l~~~~~~~i~~qIa~gL~yLHs~gI  168 (620)
                      ++++..++..|+||||++ |+|.+++.....                      ..+++..++.++.||+.||.|||+++|
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  171 (314)
T 2ivs_A           92 YGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL  171 (314)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999999999999998 677777764322                      348999999999999999999999999


Q ss_pred             eeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh
Q 007046          169 LVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT  248 (620)
Q Consensus       169 iHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt  248 (620)
                      +||||||+|||++.++.+||+|||+++....... ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++
T Consensus       172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t  247 (314)
T 2ivs_A          172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVT  247 (314)
T ss_dssp             ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHT
T ss_pred             cccccchheEEEcCCCCEEEcccccccccccccc-ceeccCCCCcccccChhhhcCC---CcCchhhHHHHHHHHHHHHh
Confidence            9999999999999999999999999987643211 1122344678999999998643   58899999999999999999


Q ss_pred             -CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          249 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       249 -G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                       |..||.+.+..++...+... ..+..+..+++++.++|.+||+.||++||++.++++.|+..
T Consensus       248 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          248 LGGNPYPGIPPERLFNLLKTG-HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             TSCCSSTTCCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHhhcC-CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             99999998888877766544 34567788999999999999999999999999999987763

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.2e-42  Score=359.91  Aligned_cols=253  Identities=22%  Similarity=0.300  Sum_probs=194.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|+++....... ..+.++.  .+++.++||||+++++++..+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~~~~~~~~   75 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTG------VYVALKEVKLDSEEGTPSTAIREI--SLMKELKHENIVRLYDVIHTE   75 (317)
T ss_dssp             ---------------CEEEEEECSSSC------CEEEEEEEECCSTTCSCHHHHHHH--HHHTTCCBTTBCCEEEEECCT
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCC------cEEEEEEeecccccccHHHHHHHH--HHHHhcCCCCcceEEEEEEEC
Confidence            568999999999999999999876554      4899999976543222 2222322  356777999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKG----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~----~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +.+||||||++|+|.+.+.....    ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        76 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  155 (317)
T 2pmi_A           76 NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA  155 (317)
T ss_dssp             TEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred             CeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccc
Confidence            99999999999999888865432    46899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--  272 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--  272 (620)
                      +....   .........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+......+  
T Consensus       156 ~~~~~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~  230 (317)
T 2pmi_A          156 RAFGI---PVNTFSSEVVTLWYRAPDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE  230 (317)
T ss_dssp             EETTS---CCCCCCCCCSCCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCT
T ss_pred             eecCC---CcccCCCCcccccccCchHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            87632   12233456899999999998642  358899999999999999999999999988887777665421111  


Q ss_pred             ------------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ------------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                    ..+..+++++.+||.+||+.||++||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          231 SLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                                          112367899999999999999999999999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-42  Score=361.23  Aligned_cols=269  Identities=19%  Similarity=0.288  Sum_probs=221.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|++..... ...++.||||+++..........+.++. .+++.++||||+++++++
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLP-YEPFTMVAVKMLKEEASADMQADFQREA-ALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSST-TSSEEEEEEEECCTTCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEE
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCC-CCCceeEEEEEeccccCHHHHHHHHHHH-HHHHhCCCCCEEEEEEEE
Confidence            45778999999999999999999999875432 2455789999998765444333333333 355667999999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeec
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLN  172 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~----------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrD  172 (620)
                      ..++..||||||++| +|.+++....                      ...+++..++.++.||+.||.|||+++|+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999999999985 7777776432                      15789999999999999999999999999999


Q ss_pred             ccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 007046          173 LKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQ  251 (620)
Q Consensus       173 LKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~  251 (620)
                      |||+|||++.++.+||+|||+++....... ........||+.|+|||++.+.   .++.++|+||||+++|+|++ |..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGC-BC----CCBCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCcc-ccccCCCcccceecChhhhccC---CcCcccccHHHHHHHHHHHhcCCC
Confidence            999999999999999999999987632211 1222345689999999998643   68899999999999999999 999


Q ss_pred             CCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          252 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       252 Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      ||.+.+..++...+.... .+..+..+++++.++|.+||+.||++||++.++++.|....
T Consensus       276 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          276 PYYGMAHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             TTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCCCCChHHHHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            999999888887776543 44568899999999999999999999999999999998753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.5e-42  Score=367.61  Aligned_cols=267  Identities=16%  Similarity=0.163  Sum_probs=202.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHH--HHHHH-------HHHHHHccCCCce
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV--LLERL-------NDLFLKCQGVEGI  108 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~--~~~~~-------~~~~l~~~~h~nI  108 (620)
                      +..++|++.+.||+|+||.||+|.+..+.. ...++.||||++.........+  .+.+.       +...+..++|+||
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSES-VGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSC-CCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccc-cccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            456799999999999999999999876532 3345689999997665322111  11111       1113456789999


Q ss_pred             eEeEEEEEEC----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc--c
Q 007046          109 CWLQGISVIN----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--E  182 (620)
Q Consensus       109 v~l~g~~~~~----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld--~  182 (620)
                      +++++++...    ...||||||+.|+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++  .
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            9999998774    56899999996677777654 557899999999999999999999999999999999999999  8


Q ss_pred             CCcEEEeccCCcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV  258 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~  258 (620)
                      ++.+||+|||+++.+......    ........||+.|||||++.+.   .++.++|||||||++|||+||+.||.+...
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV---APSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC---CCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence            899999999999876432211    1122345699999999999754   689999999999999999999999986432


Q ss_pred             HHHHHHHHhccCCCC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          259 DEIYDAVVRRQEIPP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       259 ~ei~~~i~~~~~~~~---------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...............         .+..+|+++.+++..||..||.+||++.+|++.|..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          267 DPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            221111111000000         125789999999999999999999999999987665

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=6.4e-42  Score=359.06  Aligned_cols=259  Identities=18%  Similarity=0.249  Sum_probs=206.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+-.++|++.+.||+|+||.||+|++..++      +.||||++.......  .+ ..+..++..+.+|+||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~~-~~E~~~l~~l~~h~~i~~~~~~~~   75 (330)
T 2izr_A            5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTN------EYVAIKLEPMKSRAP--QL-HLEYRFYKQLGSGDGIPQVYYFGP   75 (330)
T ss_dssp             CEETTTEEEEEECCC-CTTSEEEEEETTTT------EEEEEEEEETTCSSC--CH-HHHHHHHHHHCSCTTSCCEEEEEE
T ss_pred             EEEcCCeEEEEEeeccCCceEEEEEECCCC------cEEEEEEeccccchH--HH-HHHHHHHHHhhCCCCCCEEEEEEe
Confidence            344578999999999999999999976554      589999997544321  12 223334444459999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc-----EEEecc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-----AVLGDV  191 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~-----vkL~DF  191 (620)
                      .++..||||||+.|+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.     +||+||
T Consensus        76 ~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DF  154 (330)
T 2izr_A           76 CGKYNAMVLELLGPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDF  154 (330)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred             cCCccEEEEEeCCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence            9999999999998788888765 3578999999999999999999999999999999999999998887     999999


Q ss_pred             CCcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Q 007046          192 GIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDA  264 (620)
Q Consensus       192 Gla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---~~ei~~~  264 (620)
                      |+++.+......    ........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+   ..+.+..
T Consensus       155 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~  231 (330)
T 2izr_A          155 ALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGK---EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQK  231 (330)
T ss_dssp             TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHH
T ss_pred             ccceeeecCCCCccccccccCCcCCCccccChHHHcCC---CCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHH
Confidence            999876432211    1123456899999999999753   68999999999999999999999998743   4445555


Q ss_pred             HHhccCCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          265 VVRRQEIPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       265 i~~~~~~~~---~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +........   ....+| ++.+++.+||+.||.+||++.+|++.|..
T Consensus       232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            543322211   123455 99999999999999999999999886654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-41  Score=358.39  Aligned_cols=270  Identities=21%  Similarity=0.311  Sum_probs=212.7

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      .....|.+++|++.+.||+|+||.||+|.+..++.  ..+..||||+++..........+.++. .+++.++|+||++++
T Consensus        36 ~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~  112 (333)
T 1mqb_A           36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG--KKEVPVAIKTLKAGYTEKQRVDFLGEA-GIMGQFSHHNIIRLE  112 (333)
T ss_dssp             --CCBCCTTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTTCCHHHHHHHHHHH-HHHHTCCCTTBCCEE
T ss_pred             hccccCChHHhhcccEEecCCCeEEEEEEEecCCC--CccccEEEEEcCCCCCHHHHHHHHHHH-HHHHhCCCCCCCcEE
Confidence            34567899999999999999999999999875542  234579999998655433333333332 356677999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+..||||||++| +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       113 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Df  191 (333)
T 1mqb_A          113 GVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDF  191 (333)
T ss_dssp             EEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCC
Confidence            999988999999999996 66666543 5578999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++................+|+.|+|||.+.+.   .++.++||||||+++|||++ |..||.+.+..++...+.... 
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-  267 (333)
T 1mqb_A          192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-  267 (333)
T ss_dssp             CC-----------------CCCGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-
T ss_pred             CcchhhccccccccccCCCCccccccCchhcccC---CCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-
Confidence            9998764322222222334578899999998643   68899999999999999999 999999998888888776543 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+.+..+++++.++|.+||+.||++||++.++++.|+..
T Consensus       268 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            4456778999999999999999999999999999987764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.1e-42  Score=387.92  Aligned_cols=278  Identities=19%  Similarity=0.270  Sum_probs=226.2

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..+..++|++.+.||+|+||.||+|+++.++      +.||||++.+.....   ...+..+.  .+++.++||||++++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg------~~vAiK~l~k~~~~~~~~~~~~~~E~--~iL~~l~hp~Iv~l~  251 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATG------KLYACKKLNKKRLKKRKGYQGAMVEK--KILAKVHSRFIVSLA  251 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHHCCCTTBCCEE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEEEhHHhhhhHHHHHHHHHH--HHHHhcCCCCEeeEE
Confidence            3467799999999999999999999987665      489999997543221   12222222  355667999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      +++...+.+||||||++ |+|.+.+....  ...+++..++.|+.||+.||.|||++||+||||||+|||++.++++||+
T Consensus       252 ~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~  331 (543)
T 3c4z_A          252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS  331 (543)
T ss_dssp             EEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEe
Confidence            99999999999999999 46666665432  3579999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAV  265 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~----~~~ei~~~i  265 (620)
                      |||+++.+...   .......+||+.|||||++.+.   .++.++|+|||||++|||++|..||.+.    ...++...+
T Consensus       332 DFGla~~~~~~---~~~~~~~~GT~~Y~APE~l~~~---~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i  405 (543)
T 3c4z_A          332 DLGLAVELKAG---QTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV  405 (543)
T ss_dssp             CCTTCEECCTT---CCCBCCCCSCTTTSCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH
T ss_pred             ecceeeeccCC---CcccccccCCccccChhhhcCC---CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH
Confidence            99999876432   1223446899999999999754   6889999999999999999999999875    345666666


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCH-----HHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM-----TDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~-----~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      ...  ...+|..+++++.+||.+||++||++||++     .+|++ .+.+..+|.........+|+.|..
T Consensus       406 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~  473 (543)
T 3c4z_A          406 LEQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS  473 (543)
T ss_dssp             HHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCS
T ss_pred             hhc--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCc
Confidence            544  345678999999999999999999999964     77886 677778888777777777777653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.6e-42  Score=355.37  Aligned_cols=266  Identities=19%  Similarity=0.337  Sum_probs=205.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +..+..++|++.++||+|+||.||+|++....  ...++.||||+++.........+..+.  .+++.++||||++++++
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~   79 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQ--DNTGEVVAVKKLQHSTEEHLRDFEREI--EILKSLQHDNIVKYKGV   79 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTC--SSCCEEEEEEEESCCCHHHHHHHHHHH--HHHHTCCCTTBCCEEEE
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEeccc--CCCCcEEEEEEcccCCHHHHHHHHHHH--HHHHhCCCCCEeeEEEE
Confidence            45678899999999999999999999864322  234578999999876655444444433  35667789999999999


Q ss_pred             EEEC--CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          115 SVIN--GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       115 ~~~~--~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +...  ..+|+||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Df  158 (295)
T 3ugc_A           80 CYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF  158 (295)
T ss_dssp             ECHHHHTSCEEEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred             EecCCCCceEEEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccC
Confidence            8653  45899999997 577777654 3456999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------------
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD------------  259 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~------------  259 (620)
                      |+++................||+.|+|||.+.+.   .++.++||||||+++|+|+||..||......            
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~  235 (295)
T 3ugc_A          159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ  235 (295)
T ss_dssp             CSCC-------------CTTCGGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTH
T ss_pred             cccccccCCcceeeeccCCCCccceeCcHHhcCC---CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccc
Confidence            9998764332222223344678889999998644   6899999999999999999999998643211            


Q ss_pred             ----HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 ----EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 ----ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                          .+...+ ......+.+..+++++.++|.+||+.||++||++.++++.|..
T Consensus       236 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          236 MIVFHLIELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhHHHHHHHH-hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                222222 3334556788999999999999999999999999999997765

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.1e-42  Score=369.98  Aligned_cols=254  Identities=20%  Similarity=0.290  Sum_probs=195.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++......  ...... ++..++..+.+|+||+++++++..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~~-~E~~~l~~l~~h~niv~l~~~~~~   80 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTG------EVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLLNVLRA   80 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTC------CEEEEEEECC--CCHHHHHHHH-HHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCC------CEEEEEEecccccChHHHHHHH-HHHHHHHhccCCCCCCeeeeEEec
Confidence            368999999999999999999987665      48999999654322  222222 233344455569999999999986


Q ss_pred             CC--EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          118 NG--KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       118 ~~--~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .+  .+|||||||+|+|.+.+..   ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           81 DNDRDVYLVFDYMETDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             TTSSCEEEEEECCSEEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCCEEEEEecccCcCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            54  7999999999988877753   579999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC------------------CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 007046          196 LLLGIPL------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  257 (620)
Q Consensus       196 ~~~~~~~------------------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~  257 (620)
                      .+.....                  ........+||+.|+|||++.+.  ..++.++|||||||++|||++|++||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            7643110                  11223456899999999998642  368899999999999999999999999998


Q ss_pred             HHHHHHHHHhccCCCC---------------------------------------------CCCCCCHHHHHHHHHhhhc
Q 007046          258 VDEIYDAVVRRQEIPP---------------------------------------------IPSGLPPAVENVLLGCFEY  292 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~---------------------------------------------~p~~~s~~l~~Li~~cL~~  292 (620)
                      ..+.+..+......+.                                             .+..+++++.+||.+||..
T Consensus       236 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~  315 (388)
T 3oz6_A          236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF  315 (388)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence            8877777654322221                                             1226789999999999999


Q ss_pred             CcCCCCCHHHHHH
Q 007046          293 DLRSRPLMTDILR  305 (620)
Q Consensus       293 dP~~RPs~~eil~  305 (620)
                      ||++|||+.++++
T Consensus       316 dP~~R~t~~e~l~  328 (388)
T 3oz6_A          316 NPNKRISANDALK  328 (388)
T ss_dssp             SGGGSCCHHHHTT
T ss_pred             CcccCCCHHHHhC
Confidence            9999999999987

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.1e-42  Score=359.92  Aligned_cols=249  Identities=18%  Similarity=0.268  Sum_probs=209.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|+++..... ...+ .++. .+++.++||||+++++++...+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~-~~~~-~~E~-~~l~~l~hpnIv~~~~~~~~~~   74 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSK------KTYMAKFVKVKGTD-QVLV-KKEI-SILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCTHH-HHHH-HHHH-HHHHHSCCTTBCCEEEEEEETT
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCC------cEEEEEEEecCccc-HHHH-HHHH-HHHHhCCCCCCCeEeEEEecCC
Confidence            468999999999999999999987655      48999999755432 2222 2332 3556779999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc--CCcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~--~~~vkL~DFGla~~  196 (620)
                      .+|+|||||+| +|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            99999999985 67666643 3457999999999999999999999999999999999999987  78999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--C
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--I  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--~  274 (620)
                      +..    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+........  .
T Consensus       154 ~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  226 (321)
T 1tki_A          154 LKP----GDNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA  226 (321)
T ss_dssp             CCT----TCEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             CCC----CCccccccCChhhcCcHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhh
Confidence            642    1223445799999999998643   578899999999999999999999999999888888876654332  1


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+++++.+||.+||..||++||++.++++
T Consensus       227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          227 FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            2578999999999999999999999999998

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.1e-42  Score=360.91  Aligned_cols=270  Identities=19%  Similarity=0.282  Sum_probs=220.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++. ......||+|+++..........+.++..++..+.+||||++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGK-EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSS-SCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCc-ccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            456888999999999999999999999877654 2345689999998765444333334444344444489999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLK------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      +..++..|+||||++| +|.+.+....            ...+++..++.++.||+.||+|||+++|+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            9999999999999985 8887776432            35689999999999999999999999999999999999999


Q ss_pred             cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 007046          182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  260 (620)
Q Consensus       182 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~e  260 (620)
                      .++.+||+|||+++...... .........||+.|+|||++.+.   .++.++||||||+++|+|+| |..||.+.....
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVKWMAPESIFDC---VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCT-TSEECSSCEECGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             CCCeEEECcccccccccccc-ceeecCCCCCCccccCHHHhccC---CCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence            99999999999998664321 11122344678899999998643   68899999999999999999 999998877666


Q ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       261 i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ....+.........+..+++++.++|.+||+.||.+||++.++++.|+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            5555655555666788899999999999999999999999999998765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.1e-41  Score=349.97  Aligned_cols=262  Identities=18%  Similarity=0.235  Sum_probs=210.0

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|++..++      +.||||++.......  .+ .++...+..+.+|+|++++++++
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~~-~~e~~~~~~l~~~~~i~~~~~~~   75 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNN------QQVAIKFEPRRSDAP--QL-RDEYRTYKLLAGCTGIPNVYYFG   75 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEECCTTSC--CH-HHHHHHHHHTTTCTTCCCEEEEE
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCC------cEEEEEEeccCCccH--HH-HHHHHHHHHHhcCCCCCeEEeec
Confidence            3456788999999999999999999976554      589999987543221  11 22233445555899999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc-----EEEec
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-----AVLGD  190 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~-----vkL~D  190 (620)
                      ......|+||||+.++|.+++.. ...++++..+..++.||+.||+|||+++|+||||||+|||++.++.     +||+|
T Consensus        76 ~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~D  154 (298)
T 1csn_A           76 QEGLHNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVD  154 (298)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred             CCCceeEEEEEecCCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence            99999999999997788888764 4567999999999999999999999999999999999999987776     99999


Q ss_pred             cCCcccccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHH
Q 007046          191 VGIPHLLLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYD  263 (620)
Q Consensus       191 FGla~~~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~---~~~ei~~  263 (620)
                      ||+++........    ........||+.|+|||.+.+.   .++.++||||||+++|+|++|+.||.+.   ...+.+.
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  231 (298)
T 1csn_A          155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE  231 (298)
T ss_dssp             CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred             CccccccccccccccccccCccCCCCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH
Confidence            9999877543211    1223456799999999998644   6899999999999999999999999874   3445555


Q ss_pred             HHHhccCCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          264 AVVRRQEIP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       264 ~i~~~~~~~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+.......   .....+++++.+++.+||+.||++||++.+|++.|...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          232 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            444332222   23457899999999999999999999999999877663

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.1e-42  Score=360.61  Aligned_cols=266  Identities=19%  Similarity=0.307  Sum_probs=207.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|++..+++.  -...||+|.++..........+.++. .+++.++||||++++++
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~   85 (327)
T 3poz_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEILDEA-YVMASVDNPHVCRLLGI   85 (327)
T ss_dssp             SEECCGGGEEEEEEEEEETTEEEEEEEECC------CCEEEEEEEC-------CHHHHHHHH-HHHHHCCBTTBCCEEEE
T ss_pred             HhhcCHHHcccceEEeeCCCeEEEEEEEcCCCce--EEEEEEEeecccccCHHHHHHHHHHH-HHHHhCCCCCEeEEEEE
Confidence            4457788999999999999999999998766532  23457999886544322222222222 35566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +..+. .++||||+. |+|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~-~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~  163 (327)
T 3poz_A           86 CLTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EESSS-EEEEEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred             EecCC-eEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcc
Confidence            98765 778889988 677777654 457899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++...... .........||+.|+|||++.+.   .++.++|||||||++|||+| |..||.+.+..++...+... ...
T Consensus       164 a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~  238 (327)
T 3poz_A          164 AKLLGAEE-KEYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERL  238 (327)
T ss_dssp             HHHHTTTC-C-------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCC
T ss_pred             eeEccCCc-ccccccCCCccccccChHHhccC---CCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcC-CCC
Confidence            98764322 12222344678899999998643   68999999999999999999 99999998887777666544 345


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+..++.++.+++.+||+.||++||++.++++.|...
T Consensus       239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999987663

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.1e-41  Score=348.85  Aligned_cols=259  Identities=23%  Similarity=0.346  Sum_probs=211.2

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-------HHHHHHHHHHHHHccCC
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-------RVLLERLNDLFLKCQGV  105 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-------~~~~~~~~~~~l~~~~h  105 (620)
                      ...+.+..++|++.+.||+|+||.||+|++..++      +.||+|++........       ..+..+ . .+++.++|
T Consensus        11 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~E-~-~~l~~l~h   82 (287)
T 4f0f_A           11 SRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDK------SVVAIKSLILGDSEGETEMIEKFQEFQRE-V-FIMSNLNH   82 (287)
T ss_dssp             -CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTC------CEEEEEECCCCTTTCCHHHHCCSHHHHHH-H-HHHTTCCC
T ss_pred             hhhhhhhhccceehhccccCCceeEEEEEEcCCc------eEEEEEEeeccccccchhHHHHHHHHHHH-H-HHHHhCCC
Confidence            3455688899999999999999999999987655      4799999975443211       222222 2 35666789


Q ss_pred             CceeEeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEcc
Q 007046          106 EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNE  182 (620)
Q Consensus       106 ~nIv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~  182 (620)
                      +||+++++++....  ++||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+++  |+||||||+|||++.
T Consensus        83 ~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~  159 (287)
T 4f0f_A           83 PNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQS  159 (287)
T ss_dssp             TTBCCEEEEETTTT--EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESC
T ss_pred             CCchhhheeecCCC--eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEec
Confidence            99999999986554  79999998 677677654 4568999999999999999999999999  999999999999988


Q ss_pred             CCc-----EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 007046          183 ADR-----AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  257 (620)
Q Consensus       183 ~~~-----vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~  257 (620)
                      ++.     +||+|||+++...      .......||+.|+|||++... ...++.++|+|||||++|+|++|..||....
T Consensus       160 ~~~~~~~~~kl~Dfg~~~~~~------~~~~~~~g~~~y~aPE~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          160 LDENAPVCAKVADFGLSQQSV------HSVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             CCTTCSCCEEECCCTTCBCCS------SCEECCCCCCTTSCGGGSSCS-SCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cCCCCceeEEeCCCCcccccc------ccccccCCCccccCchhhccC-CCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            776     9999999997542      233456799999999998532 3357889999999999999999999998765


Q ss_pred             HHH--HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          258 VDE--IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       258 ~~e--i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+  ....+......+.++..+++++.++|.+||+.||++||++.++++.|+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            433  3555666666777889999999999999999999999999999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.5e-42  Score=371.79  Aligned_cols=262  Identities=23%  Similarity=0.305  Sum_probs=215.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|+.++|++.+.||+|+||.||+|++..++      +.||||+++..........+.++. .+++.++||||++++++
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~  180 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADN------TLVAVKSCRETLPPDLKAKFLQEA-RILKQYSHPNIVRLIGV  180 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEECCTTSCHHHHTTTTHHH-HHHTTCCCTTBCCEEEE
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCC------eEEEEEEccccCCHHHHHHHHHHH-HHHHhCCCCCEEEEEEE
Confidence            44588899999999999999999999987554      489999997654333222222222 35677799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +..++.+||||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       181 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~  259 (377)
T 3cbl_A          181 CTQKQPIYIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM  259 (377)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred             EecCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence            998889999999998 577777653 445799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++....... ........+|+.|+|||.+.+.   .++.++|||||||++|||++ |..||.+.+..++...+... ...
T Consensus       260 s~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~  334 (377)
T 3cbl_A          260 SREEADGVY-AASGGLRQVPVKWTAPEALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG-GRL  334 (377)
T ss_dssp             CEECTTSEE-ECCSSCCEEEGGGSCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT-CCC
T ss_pred             ceecCCCce-eecCCCCCCCcCcCCHhHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            986532110 1111222457789999998643   68899999999999999998 99999999888887766544 445


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +.|..+++++.+||.+||+.||++||++.++++.|+.
T Consensus       335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            5788899999999999999999999999999997765

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.8e-42  Score=390.23  Aligned_cols=275  Identities=19%  Similarity=0.296  Sum_probs=225.0

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .+..++|++.+.||+|+||.||+|++..++      +.||||++.+....   ....+..+ . .+++.++||||+++++
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg------~~vAvK~l~k~~~~~~~~~~~~~~E-~-~iL~~l~hp~Iv~l~~  251 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATG------KMYACKKLEKKRIKKRKGEAMALNE-K-QILEKVNSRFVVSLAY  251 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHH-H-HHHHHCCCTTBCCEEE
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEhHhhhhhHHHHHHHHH-H-HHHHHcCCCCEeeEEE
Confidence            377889999999999999999999987665      48999999753321   11222222 2 3566679999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.+.+.+||||||++ |+|.+.+.......+++..++.|+.||+.||+|||++||+||||||+|||++.++++||+|||
T Consensus       252 ~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFG  331 (576)
T 2acx_A          252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG  331 (576)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecc
Confidence            9999999999999998 566666654334569999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhc
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRR  268 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~----~~ei~~~i~~~  268 (620)
                      +++....    .......+||+.|||||++.+.   .++.++|||||||++|||++|..||.+..    ..++...+...
T Consensus       332 la~~~~~----~~~~~~~~GT~~Y~APEvl~~~---~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~  404 (576)
T 2acx_A          332 LAVHVPE----GQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV  404 (576)
T ss_dssp             TCEECCT----TCCEECCCSCGGGCCHHHHTTC---EESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC
T ss_pred             cceeccc----CccccccCCCccccCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc
Confidence            9987642    1223456899999999999743   68899999999999999999999998753    45566555433


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                        ...++..+++++.+||.+||+.||++||     ++.++++ .+....+|.........+|+.|.
T Consensus       405 --~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~  468 (576)
T 2acx_A          405 --PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPD  468 (576)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             --cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCC
Confidence              4456788999999999999999999999     7899987 67777888877777777777665

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-41  Score=348.31  Aligned_cols=264  Identities=19%  Similarity=0.273  Sum_probs=214.1

Q ss_pred             CCCcCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...++.++|.+.+ .||+|+||.||+|.+....    .+..||||+++..........+.++.. +++.++||||+++++
T Consensus         3 ~~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~   77 (287)
T 1u59_A            3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRK----KQIDVAIKVLKQGTEKADTEEMMREAQ-IMHQLDNPYIVRLIG   77 (287)
T ss_dssp             CCBCCGGGEEEEEEEEECCTTEEEEEEEEC-------CCEEEEEEEECSSCCHHHHHHHHHHHH-HHHHCCCTTBCCEEE
T ss_pred             cccccHHHhhhhhccccccCceeEEEeEeccCC----CcceEEEEecCCccchhHHHHHHHHHH-HHHhCCCCCEeEEEE
Confidence            4457788999998 9999999999999875432    346899999987654333333333332 455568999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++ ..+..|+||||++| +|.+.+. .....+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||
T Consensus        78 ~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg  155 (287)
T 1u59_A           78 VC-QAEALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG  155 (287)
T ss_dssp             EE-ESSSEEEEEECCTTEEHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred             Ee-cCCCcEEEEEeCCCCCHHHHHH-hCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccc
Confidence            98 55679999999996 5655554 245679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++................||+.|+|||++.+.   .++.++|+||||+++|+|++ |..||...+..++...+... ..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~-~~  231 (287)
T 1u59_A          156 LSKALGADDSYYTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-KR  231 (287)
T ss_dssp             TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-CC
T ss_pred             ceeeeccCcceeeccccccccccccCHHHhccC---CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC-Cc
Confidence            998764322222223345678999999998643   58889999999999999999 99999998888877776554 34


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..+..+++++.++|.+||..||++||++.++++.|..
T Consensus       232 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          232 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            56788999999999999999999999999999987765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.4e-41  Score=357.01  Aligned_cols=273  Identities=18%  Similarity=0.275  Sum_probs=219.9

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCc-CCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTE-DCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~e-d~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      .....+..++|++.+.||+|+||.||+|.+..... ....+..||||+++..........+.++..++..+.+||||+++
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            34556888999999999999999999999865332 12356789999998765443333333444344555599999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCC
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF  176 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~  176 (620)
                      ++++...+.+|+||||++| +|.+++....              ...+++..++.++.||+.||.|||+++|+||||||+
T Consensus       107 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  186 (334)
T 2pvf_A          107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  186 (334)
T ss_dssp             EEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence            9999999999999999985 7777775432              134899999999999999999999999999999999


Q ss_pred             cEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 007046          177 NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG  255 (620)
Q Consensus       177 NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~  255 (620)
                      |||++.++.+||+|||+++....... ........+|+.|+|||++.+.   .++.++||||||+++|+|++ |..||.+
T Consensus       187 NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~  262 (334)
T 2pvf_A          187 NVLVTENNVMKIADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPG  262 (334)
T ss_dssp             GEEECTTCCEEECCCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             eEEEcCCCCEEEcccccccccccccc-ccccCCCCcccceeChHHhcCC---CcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            99999999999999999987643211 1122344678999999998643   58899999999999999999 9999999


Q ss_pred             CCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..++...+.... ....+..+++++.++|.+||..||++||++.++++.|...
T Consensus       263 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          263 IPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             CCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99888887776543 4556788999999999999999999999999999977764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=5.9e-42  Score=363.07  Aligned_cols=247  Identities=19%  Similarity=0.266  Sum_probs=205.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|.++.++      +.||||+++.......     ++.+++.++.+||||+++++++.+++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~-----~E~~~l~~~~~hp~iv~~~~~~~~~~   89 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATN------MEFAVKIIDKSKRDPT-----EEIEILLRYGQHPNIITLKDVYDDGK   89 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTTCCCH-----HHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCC------CEEEEEEEEcccCChH-----HHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence            467999999999999999999987665      4899999976543321     22234556668999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC----CcEEEeccCCc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLGDVGIP  194 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~----~~vkL~DFGla  194 (620)
                      .+|||||||+ |+|.+.+.  ..+.+++..+..++.||+.||+|||++||+||||||+|||+..+    +.+||+|||++
T Consensus        90 ~~~lv~E~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            9999999998 57777775  45679999999999999999999999999999999999998543    35999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHhccCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG---RSVDEIYDAVVRRQEI  271 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~---~~~~ei~~~i~~~~~~  271 (620)
                      +.....   .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+   .+..+++..+......
T Consensus       168 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~  241 (342)
T 2qr7_A          168 KQLRAE---NGLLMTPCYTANFVAPEVLERQ---GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS  241 (342)
T ss_dssp             EECBCT---TCCBCCSSCCSSCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC
T ss_pred             ccCcCC---CCceeccCCCccccCHHHhcCC---CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc
Confidence            876432   2233456899999999998643   578899999999999999999999986   4566777777765543


Q ss_pred             C--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 P--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .  ..+..+++++.+||.+||..||++||++.++++
T Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2  234679999999999999999999999999997

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.6e-42  Score=367.67  Aligned_cols=268  Identities=19%  Similarity=0.265  Sum_probs=216.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|++.... +...++.||||+++............++. .+++.++|+||+++++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMP-NDPSPLQVAVKTLPEVCSEQDELDFLMEA-LIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC------CCEEEEEEECCSSCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCC-CCCcceeEEEEecccccChhhHHHHHHHH-HHHHhCCCCCCCeEEEEE
Confidence            3577789999999999999999999976542 23456789999997654433332233332 355667999999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cE
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RA  186 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~-----~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~v  186 (620)
                      ......||||||++ |+|.+++.....     ..+++..++.++.||+.||+|||++||+||||||+|||++.++   .+
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence            99889999999997 478777765432     4589999999999999999999999999999999999999555   59


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i  265 (620)
                      ||+|||+++...... .........||+.|+|||++.+.   .++.++|||||||++|||++ |..||.+.+..++...+
T Consensus       224 kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i  299 (367)
T 3l9p_A          224 KIGDFGMARDIYRAG-YYRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  299 (367)
T ss_dssp             EECCCHHHHHHHHHS-SCTTCCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             EECCCcccccccccc-ccccCCCcCCcccEECHHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999998653211 12223445789999999998643   68999999999999999998 99999999998888877


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .... ....+..+++++.+||.+||+.||++||++.+|++.|+..
T Consensus       300 ~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          300 TSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCC-CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            6544 4456788999999999999999999999999999977653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=351.03  Aligned_cols=252  Identities=19%  Similarity=0.249  Sum_probs=199.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.++||+|+||.||+|.+..++      +.||||++........ .....++. .+++.++|+||+++++++...+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTG------QIVAIKKFLESEDDPVIKKIALREI-RMLKQLKHPNLVNLLEVFRRKR   75 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECCCCC-HHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCC------cEEEEEEeeccccchHHHHHHHHHH-HHHHhCCCCCccchhheeecCC
Confidence            68999999999999999999987655      4899999876544332 22222222 3566678999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      ..|+||||++|+++..+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        76 ~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            9999999999876666654 456799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--------
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------  271 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~--------  271 (620)
                      .   ........||+.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+......        
T Consensus       155 ~---~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (311)
T 4agu_A          155 P---SDYYDDEVATRWYRSPELLVGD--TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV  229 (311)
T ss_dssp             --------------GGGCCHHHHHTC--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred             c---ccccCCCcCCccccChHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccc
Confidence            1   2223455799999999998642  35789999999999999999999999998877666555432110        


Q ss_pred             ------------CC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------PP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------~~---------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                  +.         ....+++++.+||.+||+.||++|||++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                        00         01468899999999999999999999999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.9e-41  Score=355.96  Aligned_cols=248  Identities=20%  Similarity=0.277  Sum_probs=207.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh------HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED------RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++.....      ....+..+ . .+++.++||||++++++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~~~E-~-~~l~~l~hp~iv~~~~~   82 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTG------LQYAAKFIKKRRTKSSRRGVSREDIERE-V-SILKEIQHPNVITLHEV   82 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEEEBCCSTTCSSSBCHHHHHHH-H-HHHHHCCCTTBCCEEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCC------cEEEEEEEEccccccccchhhHHHHHHH-H-HHHHhCCCCCCCcEEEE
Confidence            56999999999999999999987655      48999999764322      12223333 2 24566789999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEEe
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLG  189 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL~  189 (620)
                      +...+.+|+||||++ |+|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++    .+||+
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~  160 (326)
T 2y0a_A           83 YENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII  160 (326)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred             EEeCCEEEEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence            999999999999998 57777664  456799999999999999999999999999999999999999887    89999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++....    ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+....
T Consensus       161 Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~  233 (326)
T 2y0a_A          161 DFGLAHKIDF----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  233 (326)
T ss_dssp             CCTTCEECCT----TSCCCCCCSCTTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC
T ss_pred             ECCCCeECCC----CCccccccCCcCcCCceeecCC---CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC
Confidence            9999987642    1233456899999999998643   68899999999999999999999999998888887776543


Q ss_pred             CCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....  .+..+++++.+||.+||..||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            3221  23578999999999999999999999999998

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=5.1e-42  Score=359.98  Aligned_cols=254  Identities=21%  Similarity=0.261  Sum_probs=201.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||++...........+.++. .+++.++|+||+++++++..++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~~~~~~~~~~   78 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFYGHRREGN   78 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECC-------CHHHHH-HHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCC------cEEEEEEEEcccccchHHHHHHHH-HHHHhCCCCCCCeEEEEEecCC
Confidence            378999999999999999999987665      479999997654433222233333 3566679999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++| +|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  156 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             eEEEEEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence            99999999985 6666653  34579999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~~~~p~~  277 (620)
                      ... ........+||+.|+|||++.+.  ..++.++|||||||++|+|++|..||...... ..+...............
T Consensus       157 ~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (323)
T 3tki_A          157 YNN-RERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK  233 (323)
T ss_dssp             ETT-EECCBCSCCSCGGGSCHHHHHCS--SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGG
T ss_pred             cCC-cccccCCCccCcCccCcHHhccC--CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCcccc
Confidence            211 12223456899999999998643  12467899999999999999999999876543 333333333333333467


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++++.+||.+||+.||++||++.|+++
T Consensus       234 ~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          234 IDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            8999999999999999999999999987

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.8e-41  Score=372.10  Aligned_cols=269  Identities=20%  Similarity=0.260  Sum_probs=192.2

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .+.-.++|++.+.||+|+||.||+|++..++      +.||||++.......  ...+..+.  .+++.++|+||+++++
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~~~~E~--~~l~~l~h~niv~l~~  119 (458)
T 3rp9_A           48 DWQIPDRYEIRHLIGTGSYGHVCEAYDKLEK------RVVAIKKILRVFEDLIDCKRILREI--AILNRLNHDHVVKVLD  119 (458)
T ss_dssp             SCCSCTTEEECCC-------CEEEEEECC--------CEEEEEEECSTTSSHHHHHHHHHHH--HHHHHCCCTTBCCEEE
T ss_pred             cCccCCCeEEeeEeeecCCeEEEEEEECCCC------cEEEEEEechhhcCHHHHHHHHHHH--HHHHhCCCCCCCceEE
Confidence            3445689999999999999999999987665      489999997643322  22233322  3566679999999999


Q ss_pred             EEEEC-----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          114 ISVIN-----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       114 ~~~~~-----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      ++...     ..+||||||++|+|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus       120 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl  197 (458)
T 3rp9_A          120 IVIPKDVEKFDELYVVLEIADSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV  197 (458)
T ss_dssp             ECCCSCTTTCCCEEEEECCCSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred             EEecCCcccCceEEEEEeccccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEee
Confidence            98543     5699999999999888875  4567999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCC------------------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHH
Q 007046          189 GDVGIPHLLLGIPLP------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII  244 (620)
Q Consensus       189 ~DFGla~~~~~~~~~------------------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~  244 (620)
                      +|||+++........                        .......+||+.|||||++..  ...++.++|||||||++|
T Consensus       198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~DiwSlG~il~  275 (458)
T 3rp9_A          198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL--QENYTEAIDVWSIGCIFA  275 (458)
T ss_dssp             CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT--CCCCCTHHHHHHHHHHHH
T ss_pred             cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC--CCCCCcHhHHHHHHHHHH
Confidence            999999876422111                        012345689999999998642  235899999999999999


Q ss_pred             HHHh-----------CCCCCCCCCH--------------------HHHHHHHHhccCCC---------------------
Q 007046          245 EMLT-----------GVQPRCGRSV--------------------DEIYDAVVRRQEIP---------------------  272 (620)
Q Consensus       245 ellt-----------G~~Pf~~~~~--------------------~ei~~~i~~~~~~~---------------------  272 (620)
                      ||++           |.++|.+.+.                    .+.+..+......+                     
T Consensus       276 elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  355 (458)
T 3rp9_A          276 ELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP  355 (458)
T ss_dssp             HHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSC
T ss_pred             HHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcC
Confidence            9999           6777766431                    12222222111000                     


Q ss_pred             --------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCCCC
Q 007046          273 --------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       273 --------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~~~  316 (620)
                              .....+++++.+||.+||..||++|||++|+++ .+.....|...
T Consensus       356 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~  408 (458)
T 3rp9_A          356 KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEV  408 (458)
T ss_dssp             CCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGG
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCcc
Confidence                    112456899999999999999999999999998 45555444433

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2e-41  Score=358.87  Aligned_cols=252  Identities=21%  Similarity=0.280  Sum_probs=204.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc----CCCceeEeE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ----GVEGICWLQ  112 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~----~h~nIv~l~  112 (620)
                      .+-.++|++.++||+|+||.||+|++..++      +.||||+++...... ... ..+..++..+.    +|+||++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~-~~~-~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNK------KYYAVKVVRNIKKYT-RSA-KIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECSCHHHH-HHH-HHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCC------eEEEEEEeccchhhh-hhh-HHHHHHHHHhcccCCCCCCeeccc
Confidence            345678999999999999999999986655      489999997533221 222 22222333332    499999999


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc----------
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----------  182 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~----------  182 (620)
                      +++...+..||||||+.++|.+.+.......+++..+..++.||+.||+|||++||+||||||+|||++.          
T Consensus       103 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~  182 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITV  182 (360)
T ss_dssp             EEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred             ceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccch
Confidence            9999999999999999889999888655567999999999999999999999999999999999999975          


Q ss_pred             ---------------CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHH
Q 007046          183 ---------------ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML  247 (620)
Q Consensus       183 ---------------~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ell  247 (620)
                                     ++.+||+|||+++....      ......||+.|+|||++.+.   .++.++|||||||++|+|+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell  253 (360)
T 3llt_A          183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVILNL---GWDVSSDMWSFGCVLAELY  253 (360)
T ss_dssp             ECTTTCCEEEEEEESCCCEEECCCTTCEETTS------CCCSCCSCGGGCCHHHHTTC---CCCTTHHHHHHHHHHHHHH
T ss_pred             hcccccccccccccCCCCEEEEeccCceecCC------CCcCccCcccccCcHHHcCC---CCCCccchHHHHHHHHHHH
Confidence                           78999999999986532      23456899999999999744   6899999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHhccCCCC------------------------CC--------------------CCCCHHHH
Q 007046          248 TGVQPRCGRSVDEIYDAVVRRQEIPP------------------------IP--------------------SGLPPAVE  283 (620)
Q Consensus       248 tG~~Pf~~~~~~ei~~~i~~~~~~~~------------------------~p--------------------~~~s~~l~  283 (620)
                      +|+.||.+.+..+.+..+.......+                        .|                    ...++++.
T Consensus       254 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (360)
T 3llt_A          254 TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC  333 (360)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred             HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence            99999999888777666654322111                        01                    11237788


Q ss_pred             HHHHHhhhcCcCCCCCHHHHHH
Q 007046          284 NVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       284 ~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +||.+||+.||++||++.++++
T Consensus       334 ~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          334 DFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHhcCChhhCCCHHHHhc
Confidence            9999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.1e-42  Score=356.23  Aligned_cols=261  Identities=21%  Similarity=0.299  Sum_probs=198.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHH--HHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV--LLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~--~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ..-.++|++.+.||+|+||.||+|++..++      +.||||+++.........  .+.++. ..++.++||||++++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~   80 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDH------RDVAVKVLRADLARDPSFYLRFRREA-QNAAALNHPAIVAVYDT   80 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECTTTTTSHHHHHHHHHHH-TTCCCCCCTTBCCEEEE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCC------ceEEEEEeCccccCCHHHHHHHHHHH-HHHHcCCCCCcceEEEe
Confidence            344578999999999999999999976654      589999998654332221  122221 24566799999999999


Q ss_pred             EEECC----EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          115 SVING----KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       115 ~~~~~----~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      +....    ..||||||++ |+|.+.+..  .+++++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        81 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~  158 (311)
T 3ork_A           81 GEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM  158 (311)
T ss_dssp             EEEEETTEEEEEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEEC
T ss_pred             eeccCCCCcccEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEe
Confidence            87643    3599999998 577666653  4579999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++.+..............||+.|+|||++.+.   .++.++||||||+++|+|++|+.||.+.+..+....+....
T Consensus       159 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~  235 (311)
T 3ork_A          159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED  235 (311)
T ss_dssp             CCSCC------------------CCTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC
T ss_pred             eccCcccccccccccccccccCcCcccCCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence            999998764332222333456799999999999754   68899999999999999999999999988887766665544


Q ss_pred             CCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHh
Q 007046          270 EIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKS  309 (620)
Q Consensus       270 ~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~  309 (620)
                      ..+.  .+..+++++.++|.+||+.||++||+..+++. .|..
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            3322  23568999999999999999999997766554 5544

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.1e-41  Score=345.44  Aligned_cols=259  Identities=17%  Similarity=0.223  Sum_probs=213.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|.+...       ..||+|+++...... ..+..+.  .++..++||||+++++++
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~~~~~   72 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWKGQ-------YDVAVKMIKEGSMSE-DEFFQEA--QTMMKLSHPKLVKFYGVC   72 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTT-------EEEEEEEECBTTBCH-HHHHHHH--HHHHHCCCTTBCCEEEEE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEecCc-------eeEEEEEeccCCCcH-HHHHHHH--HHHHhCCCCCEeeEEEEE
Confidence            457789999999999999999999986532       469999998655433 2233332  245566899999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..++..|+||||++| +|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~  151 (268)
T 3sxs_A           73 SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT  151 (268)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred             ccCCceEEEEEccCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccc
Confidence            988899999999985 56666654 4456999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +......  ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..+....+.... ...
T Consensus       152 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~  225 (268)
T 3sxs_A          152 RYVLDDQ--YVSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH-RLY  225 (268)
T ss_dssp             EECCTTC--EEECCSCCCCGGGCCHHHHHHS---EEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCC
T ss_pred             eecchhh--hhcccCCCcCcccCCHHHHhcc---CCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC-CCC
Confidence            8764321  1112334577889999998643   57889999999999999999 999999998888877765443 445


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .+..+++++.+++.+||+.||++||++.++++.|+...
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            57788999999999999999999999999999988753

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=8.3e-41  Score=341.55  Aligned_cols=250  Identities=20%  Similarity=0.269  Sum_probs=208.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++....... ....+.++. .+++.++|+||+++++++...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~   77 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINTKKLSARDFQKLEREA-RICRKLQHPNIVRLHDSIQEE   77 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCC------ceEEEEEeecccCCHHHHHHHHHHH-HHHHHcCCCCcCeEEEEEEcC
Confidence            578999999999999999999987665      479999997654322 122222222 355667899999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc---EEEeccCCc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~---vkL~DFGla  194 (620)
                      +..|+||||++| ++.+.+..  ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.   +||+|||++
T Consensus        78 ~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           78 SFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            999999999985 66676653  367999999999999999999999999999999999999987655   999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-  273 (620)
                      .....    ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+..+....+.......+ 
T Consensus       156 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  228 (284)
T 3kk8_A          156 IEVND----SEAWHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS  228 (284)
T ss_dssp             EECCS----SCBCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             EEccc----CccccCCCCCcCCcCchhhcCC---CCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc
Confidence            76642    2223446799999999998643   688999999999999999999999999998888888776654333 


Q ss_pred             -CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 -IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 -~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ....+++++.++|.+||+.||++||++.++++
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             23578999999999999999999999999998

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2e-41  Score=348.41  Aligned_cols=264  Identities=24%  Similarity=0.367  Sum_probs=197.3

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICW  110 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~  110 (620)
                      .....|..++|++.++||+|+||.||+|++..         .||+|+++......  ...+..+.  .+++.++|+||++
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---------~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~   84 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---------DVAVKMLNVTAPTPQQLQAFKNEV--GVLRKTRHVNILL   84 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESSS---------EEEEEEESCSSCCHHHHHHHHHHH--HHHTTCCCTTBCC
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEcC---------ceEEEEEeccCCCHHHHHHHHHHH--HHHHhCCCCcEEE
Confidence            34677999999999999999999999997421         49999997654332  22233322  3567789999999


Q ss_pred             eEEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          111 LQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       111 l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      +++++ .....++||||++| +|.+.+. .....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus        85 ~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~  162 (289)
T 3og7_A           85 FMGYS-TAPQLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG  162 (289)
T ss_dssp             EEEEE-CSSSCEEEEECCCEEEHHHHHT-TC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EEeec-cCCccEEEEEecCCCcHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEc
Confidence            99965 45668999999994 5555553 355779999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~  268 (620)
                      |||+++...... .........||+.|+|||.+.......++.++||||||+++|+|++|..||.+.... .+...+...
T Consensus       163 Dfg~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~  241 (289)
T 3og7_A          163 DFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG  241 (289)
T ss_dssp             CCC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHT
T ss_pred             cceecccccccc-ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccc
Confidence            999997653211 122334567999999999986444557889999999999999999999999876544 444444444


Q ss_pred             cCCCC---CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          269 QEIPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       269 ~~~~~---~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+.   .+..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       242 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          242 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             SCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            33332   3457899999999999999999999999999988764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.7e-41  Score=359.25  Aligned_cols=258  Identities=20%  Similarity=0.260  Sum_probs=197.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +.....++|++.+.||+|+||.||+|++..++      +.||||++....... ..+.++.  .+++.++||||++++++
T Consensus        14 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~-~~~~~E~--~~l~~l~hpniv~~~~~   84 (361)
T 3uc3_A           14 PIMHDSDRYDFVKDIGSGNFGVARLMRDKLTK------ELVAVKYIERGAAID-ENVQREI--INHRSLRHPNIVRFKEV   84 (361)
T ss_dssp             CCCCCTTTEEEEEEESSSTTSSEEEEEETTTC------CEEEEEEEESSTTSC-HHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             cCCCCCCcEEEEEEeccCCCEEEEEEEECCCC------cEEEEEEEecCcccc-HHHHHHH--HHHHhCCCCCCCcEEEE
Confidence            44567789999999999999999999987665      489999997654322 2222222  35566789999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc--EEEecc
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDV  191 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~--vkL~DF  191 (620)
                      +...+.+||||||++ |+|.+.+..  .+++++..+..++.||+.||+|||++||+||||||+|||++.++.  +||+||
T Consensus        85 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Df  162 (361)
T 3uc3_A           85 ILTPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDF  162 (361)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred             EeeCCEEEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeec
Confidence            999999999999998 577676653  457999999999999999999999999999999999999987765  999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHH
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVV  266 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~-sDVwSlGvil~elltG~~Pf~~~~~----~ei~~~i~  266 (620)
                      |+++....    ........||+.|+|||++.+.   .++.+ +|||||||++|+|++|+.||.+...    ......+.
T Consensus       163 g~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  235 (361)
T 3uc3_A          163 GYSKSSVL----HSQPKSTVGTPAYIAPEVLLRQ---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL  235 (361)
T ss_dssp             CCC-------------------CTTSCHHHHHCS---SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred             Cccccccc----cCCCCCCcCCCCcCChhhhcCC---CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence            99875422    2233455799999999998643   45444 8999999999999999999987543    34455554


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH--HHHhC
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR--VFKSD  310 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~--~L~~~  310 (620)
                      ......+....+++++.+||.+||..||++||++.++++  .|...
T Consensus       236 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             TTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             cCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            444443444578999999999999999999999999998  45443

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.2e-41  Score=347.93  Aligned_cols=261  Identities=18%  Similarity=0.241  Sum_probs=213.1

Q ss_pred             CCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           32 NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        32 ~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ......+++++|++.+.||+|+||.||+|.+...       ..||+|+++...... ..+.++.  .++..++|+||+++
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~vavK~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~   84 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSE-DEFIEEA--KVMMNLSHEKLVQL   84 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEETTT-------EEEEEEEECTTSBCH-HHHHHHH--HHHHTCCCTTBCCE
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEcCC-------CeEEEEEecCCCCCH-HHHHHHH--HHHhcCCCCCEeeE
Confidence            3456679999999999999999999999986532       469999998665433 2233322  35666789999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+..|+||||++ |+|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~D  163 (283)
T 3gen_A           85 YGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSD  163 (283)
T ss_dssp             EEEECSSSSEEEEECCCTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECS
T ss_pred             EEEEecCCCeEEEEeccCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcc
Confidence            999999899999999998 566666653 346799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||+++......  ........+|+.|+|||.+.+.   .++.++|+||||+++|+|+| |..||...+..+....+... 
T Consensus       164 fg~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-  237 (283)
T 3gen_A          164 FGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-  237 (283)
T ss_dssp             TTGGGGBCCHH--HHSTTSTTSCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-
T ss_pred             ccccccccccc--cccccCCccCcccCCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-
Confidence            99998663211  1122334578899999998743   68899999999999999998 99999999988888877654 


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .....+..+++++.++|.+||+.||++||++.++++.|..
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          238 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            3445677889999999999999999999999999997765

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.9e-41  Score=359.69  Aligned_cols=251  Identities=20%  Similarity=0.292  Sum_probs=202.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-----HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-----RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-----~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||+++.....     ....+.++ . .+++.++||||++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~E-~-~~l~~l~hpnIv~~~~~   94 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETG------QQFAVKIVDVAKFTSSPGLSTEDLKRE-A-SICHMLKHPHIVELLET   94 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHTSSSCCHHHHHHH-H-HHHHHCCCTTBCCEEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCC------CEEEEEEEEhhhccccccchHHHHHHH-H-HHHHhCCCCCCCcEEEE
Confidence            467999999999999999999987665      48999998643211     12223232 2 24566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc---EEE
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVL  188 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~---vkL  188 (620)
                      +..++.+|||||||+ |+|.+.+...  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.   +||
T Consensus        95 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl  174 (351)
T 3c0i_A           95 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL  174 (351)
T ss_dssp             EEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEE
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEE
Confidence            999999999999999 5676666543  2346899999999999999999999999999999999999987654   999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++.....   .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+. ..+++..+...
T Consensus       175 ~Dfg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~  247 (351)
T 3c0i_A          175 GGFGVAIQLGES---GLVAGGRVGTPHFMAPEVVKRE---PYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKG  247 (351)
T ss_dssp             CCCTTCEECCTT---SCBCCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHT
T ss_pred             ecCcceeEecCC---CeeecCCcCCcCccCHHHHcCC---CCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcC
Confidence            999999876432   1223456899999999999644   6889999999999999999999999875 44566666554


Q ss_pred             cCCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....  ....+++++.+||.+||..||++||++.++++
T Consensus       248 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          248 KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            43221  12578999999999999999999999999997

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=4.6e-41  Score=352.22  Aligned_cols=247  Identities=21%  Similarity=0.308  Sum_probs=206.7

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .|+..+.||+|+||.||+|++..++      +.||||+++.........+..+.  .+++.++|+||+++++++...+..
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g------~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~niv~~~~~~~~~~~~  117 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFNEV--VIMRDYQHFNVVEMYKSYLVGEEL  117 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCSHHHHHHHH--HHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCC------cEEEEEEEeccchhHHHHHHHHH--HHHHhCCCCCcceEEEEEEECCEE
Confidence            4888999999999999999976554      48999999866554444444433  356777999999999999999999


Q ss_pred             EEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          122 CIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       122 ~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      |+||||++| +|.+.+   ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++.....
T Consensus       118 ~lv~e~~~~~~L~~~l---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  194 (321)
T 2c30_A          118 WVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD  194 (321)
T ss_dssp             EEEECCCCSCBHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             EEEEecCCCCCHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC
Confidence            999999986 454444   3467999999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-CCCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLP  279 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-~~~p~~~s  279 (620)
                         ........||+.|+|||++.+   ..++.++||||||+++|+|++|..||...+..+....+...... ...+..++
T Consensus       195 ---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (321)
T 2c30_A          195 ---VPKRKSLVGTPYWMAPEVISR---SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVS  268 (321)
T ss_dssp             ---SCCBCCCCSCGGGCCHHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSC
T ss_pred             ---ccccccccCCccccCHhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCC
Confidence               122345689999999999864   36889999999999999999999999998888877777654322 12334689


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +++.++|.+||+.||++||++.++++
T Consensus       269 ~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          269 PVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999999999999997

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.3e-41  Score=345.51  Aligned_cols=250  Identities=21%  Similarity=0.298  Sum_probs=206.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .+..++|++.+.||+|+||.||+|.+..++      ..||+|++........  .....++. .+++.++||||++++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~   77 (279)
T 3fdn_A            5 QWALEDFEIGRPLGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREV-EIQSHLRHPNILRLYGY   77 (279)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHHTCHHHHHHHH-HHHTTCCCTTBCCEEEE
T ss_pred             eeecccEEEeeEEecCCCeEEEEEEEccCC------cEEEEEEEeccccchhhHHHHHHHHH-HHHHcCCCCCCcchhhe
Confidence            345688999999999999999999987665      4799999965332221  11222222 35667789999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +...+..|+||||++| ++.+.+..  ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus        78 ~~~~~~~~lv~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~  155 (279)
T 3fdn_A           78 FHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW  155 (279)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred             EecCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccc
Confidence            9999999999999995 66666653  35799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +....     ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+...  ...
T Consensus       156 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~  225 (279)
T 3fdn_A          156 SVHAP-----SSRRTDLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFT  225 (279)
T ss_dssp             ESCC-------------CCCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCC
T ss_pred             cccCC-----cccccccCCCCCccCHhHhccC---CCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC--CCC
Confidence            86542     2223456799999999998644   6788999999999999999999999999988888777543  345


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+++++.+||.+||+.||++||++.++++
T Consensus       226 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            67889999999999999999999999999998

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=6.1e-41  Score=365.88  Aligned_cols=249  Identities=22%  Similarity=0.307  Sum_probs=204.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHH--HHc---cCCCceeEeEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF--LKC---QGVEGICWLQGI  114 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~--l~~---~~h~nIv~l~g~  114 (620)
                      ..+|++.+.||+|+||.||+|.+..++      +.||||+++...... .....+. .++  ++.   .+|+||++++++
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~------~~vAvK~~~~~~~~~-~~~~~E~-~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVH------QHVALKMVRNEKRFH-RQAAEEI-RILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTT------EEEEEEEECSCHHHH-HHHHHHH-HHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCC------cEEEEEEECCccchH-HHHHHHH-HHHHHHhhccccCCcCEEEEEee
Confidence            467999999999999999999987655      589999997643222 2222222 121  121   378899999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc--EEEeccC
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDVG  192 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~--vkL~DFG  192 (620)
                      +...+.+||||||+.|+|.+.+.......+++..+..++.||+.||+|||+++|+||||||+|||++.++.  +||+|||
T Consensus       168 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          168 FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             EEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             cccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence            99999999999999999999988755567999999999999999999999999999999999999999887  9999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++...      ......+||+.|||||++.+.   .++.++|||||||++|||++|.+||.+.+..+.+..+......+
T Consensus       248 ~a~~~~------~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p  318 (429)
T 3kvw_A          248 SSCYEH------QRVYTYIQSRFYRAPEVILGA---RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP  318 (429)
T ss_dssp             TCEETT------CCCCSSCSCGGGCCHHHHHTB---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             cceecC------CcccccCCCCCccChHHHhCC---CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            997642      233456899999999999754   68999999999999999999999999988877766665432111


Q ss_pred             C---------------------------------------------------------CCCCCCHHHHHHHHHhhhcCcC
Q 007046          273 P---------------------------------------------------------IPSGLPPAVENVLLGCFEYDLR  295 (620)
Q Consensus       273 ~---------------------------------------------------------~p~~~s~~l~~Li~~cL~~dP~  295 (620)
                      .                                                         ++...++++.+||.+||+.||+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~  398 (429)
T 3kvw_A          319 SQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA  398 (429)
T ss_dssp             CHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTT
T ss_pred             CHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChh
Confidence            0                                                         1123478899999999999999


Q ss_pred             CCCCHHHHHH
Q 007046          296 SRPLMTDILR  305 (620)
Q Consensus       296 ~RPs~~eil~  305 (620)
                      +|||+.|+++
T Consensus       399 ~Rpta~e~L~  408 (429)
T 3kvw_A          399 VRMTPGQALR  408 (429)
T ss_dssp             TSCCHHHHHT
T ss_pred             hCCCHHHHhC
Confidence            9999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1e-41  Score=353.17  Aligned_cols=269  Identities=20%  Similarity=0.311  Sum_probs=214.5

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+..++|++.+.||+|+||.||+|.+.... +...++.||||+++..........+.++...+..+.+||||+++++++
T Consensus        22 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGID-KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEESSS-STTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             eecchhheeeeeEEcCCCceeEEEEEEecCC-ccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            3467889999999999999999999976533 234567999999987655444333444444555555899999999998


Q ss_pred             EECC-EEEEEEecCCC-ChHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          116 VING-KICIIMKFYEG-SVGDRMAQLKG--------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       116 ~~~~-~~~IVmE~~~G-sLld~l~~~~~--------------~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      ...+ .+|+||||++| +|.+.+.....              ..+++..++.++.||+.||.|||+++|+||||||+|||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            7654 59999999995 77777754221              12889999999999999999999999999999999999


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV  258 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~  258 (620)
                      ++.++.+||+|||+++...... .........||+.|+|||++.+.   .++.++|+||||+++|+|+| |..||.+...
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             ECCCCCEEECCCccccccccCc-cceeccCCCcceeecCchhhccc---cccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            9999999999999998653321 11112345688999999998643   68899999999999999998 9999988765


Q ss_pred             HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       259 ~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+.+............+..+++++.++|.+||+.||.+||++.++++.|..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            444434444444556778899999999999999999999999999997765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.1e-42  Score=358.35  Aligned_cols=252  Identities=21%  Similarity=0.312  Sum_probs=200.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.++||+|+||.||+|++..++      +.||||+++............++. .+++.++|+||+++++++..++.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTD------NLVALKEIRLEHEEGAPCTAIREV-SLLKDLKHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECC------CCCCCCCH-HHHSCCCCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCC------cEEEEEEEecccccccchhHHHHH-HHHHhcCCCCCCeeeeEEeeCCE
Confidence            68999999999999999999987655      489999997544322111111122 35677799999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      .||||||++|++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus        75 ~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-  152 (324)
T 3mtl_A           75 LTLVFEYLDKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-  152 (324)
T ss_dssp             EEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             EEEEecccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC-
Confidence            999999999999888875 456799999999999999999999999999999999999999999999999999976532 


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-------  273 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-------  273 (620)
                        .........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+......+.       
T Consensus       153 --~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  228 (324)
T 3mtl_A          153 --PTKTYDNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI  228 (324)
T ss_dssp             ------------CGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred             --CccccccccCcccccChhhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhh
Confidence              12233455789999999998642  3588999999999999999999999999988887777655322211       


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ---------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ---------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           ....+++++.+||.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                                 11357899999999999999999999999998

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.8e-42  Score=364.23  Aligned_cols=284  Identities=19%  Similarity=0.281  Sum_probs=218.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|++....   ..++.||||+++....   .........+..++..+.+|+||+++
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           48 AEKVGIENFELLKVLGTGAYGKVFLVRKISGH---DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             CCCCCGGGEEEEEEEEETTTEEEEEEEECSST---TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             cccccccceEEEEEeccCCCEEEEEEEEcccC---CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            34566789999999999999999999975321   2456899999875321   01111111222234444489999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+.+||||||++| +|.+.+..  ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|
T Consensus       125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D  202 (355)
T 1vzo_A          125 HYAFQTETKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD  202 (355)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESC
T ss_pred             EEEEeeCceEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEee
Confidence            9999999999999999984 77777653  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHH
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVV  266 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~----~~~ei~~~i~  266 (620)
                      ||+++.+....  .......+||+.|+|||++.+. ...++.++|||||||++|||++|..||...    ...++...+.
T Consensus       203 fG~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  279 (355)
T 1vzo_A          203 FGLSKEFVADE--TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL  279 (355)
T ss_dssp             SSEEEECCGGG--GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred             CCCCeecccCC--CCcccCcccCcCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh
Confidence            99998653211  1122346799999999998743 234788999999999999999999999753    3344554444


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      .  ..+.++..++..+.+||.+||..||++||     ++.++++ .+....+|........++|+.+.
T Consensus       280 ~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~  345 (355)
T 1vzo_A          280 K--SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPV  345 (355)
T ss_dssp             H--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             c--cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCc
Confidence            3  34557888999999999999999999999     9999998 45556667666666666666554

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=8.6e-42  Score=358.17  Aligned_cols=263  Identities=20%  Similarity=0.269  Sum_probs=209.9

Q ss_pred             CCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|.+. +.||+|+||.||+|.+..++      +.||+|+++.....  ....+ .++..++..+.+||||+++++++..
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~-~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTG------QEYAAKFLKKRRRGQDCRAEI-LHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEESEETTEECHHHH-HHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHH-HHHHHHHHhccCCCCEEEEEEEEEe
Confidence            458887 89999999999999987655      48999999764322  12233 3333345666688999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEeccCC
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGI  193 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~DFGl  193 (620)
                      .+.+|+||||++| +|.+.+.......+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence            9999999999985 6666664334478999999999999999999999999999999999999998   78999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--  271 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~--  271 (620)
                      ++....    ........||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.+.+..+.+..+......  
T Consensus       181 a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  253 (327)
T 3lm5_A          181 SRKIGH----ACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS  253 (327)
T ss_dssp             CEEC-------------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             ccccCC----ccccccccCCcCccCCeeecCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccC
Confidence            987642    1223446799999999998643   6889999999999999999999999999888887777654432  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCCCCC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGHG  317 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~~~~  317 (620)
                      ......+++.+.+||.+||+.||++||+++++++ .+.+..+|....
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~~  300 (327)
T 3lm5_A          254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLF  300 (327)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC-
T ss_pred             chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccccccc
Confidence            2344678999999999999999999999999998 455555555443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.7e-41  Score=365.40  Aligned_cols=247  Identities=18%  Similarity=0.216  Sum_probs=192.6

Q ss_pred             CCCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           40 PSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        40 ~~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      .++|.+. +.||+|+||.||+|.+..++      +.||||+++...     . ..++..++.+..+|+||+++++++.. 
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~------~~vAiK~~~~~~-----~-~~~E~~~~~~~~~hp~iv~l~~~~~~~  127 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCP-----K-ARREVELHWRASQCPHIVRIVDVYENL  127 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSH-----H-HHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCC------CEEEEEEeCcch-----h-HHHHHHHHHHhcCCCCcceEeEEEeec
Confidence            4678887 78999999999999987665      489999996432     1 12223344566799999999999876 


Q ss_pred             ---CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEec
Q 007046          118 ---NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGD  190 (620)
Q Consensus       118 ---~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~D  190 (620)
                         ...+|||||||+| +|.+.+.......+++..+..++.||+.||.|||+++|+||||||+|||++.   ++.+||+|
T Consensus       128 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~D  207 (400)
T 1nxk_A          128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  207 (400)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred             ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEe
Confidence               5679999999985 7877776433457999999999999999999999999999999999999998   78999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHH
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVV  266 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e----i~~~i~  266 (620)
                      ||+++....    .......+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.+.+...    +...+.
T Consensus       208 FG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~  280 (400)
T 1nxk_A          208 FGFAKETTS----HNSLTTPCYTPYYVAPEVLGP---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  280 (400)
T ss_dssp             CTTCEECC---------------CTTCCGGGSCC---CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH
T ss_pred             cccccccCC----CCccccCCCCCCccCHhhcCC---CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH
Confidence            999987532    223346689999999999864   368899999999999999999999998755322    344444


Q ss_pred             hccCCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 RRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .......  ....+++++.+||.+||..||++||++.++++
T Consensus       281 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             HTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4433222  22578999999999999999999999999998

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.7e-41  Score=352.31  Aligned_cols=266  Identities=20%  Similarity=0.295  Sum_probs=198.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|++..+++   ....||||+++....  .....+.++.  .+++.++||||++++
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~   91 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDG---SFVKVAVKMLKADIIASSDIEEFLREA--ACMKEFDHPHVAKLV   91 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC----------CEEEEEEC------CHHHHHHHHHH--HHHTTCCCTTBCCCC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCC---cceeEEEEEecccccCHHHHHHHHHHH--HHHHHCCCCceehhh
Confidence            455788899999999999999999999765542   223799999976532  2233333332  356667999999999


Q ss_pred             EEEEECCEE------EEEEecCCC-ChHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          113 GISVINGKI------CIIMKFYEG-SVGDRMAQLKG----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       113 g~~~~~~~~------~IVmE~~~G-sLld~l~~~~~----~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      +++......      |+||||+.| +|.+.+.....    ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        92 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~  171 (323)
T 3qup_A           92 GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA  171 (323)
T ss_dssp             EEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc
Confidence            999876655      999999985 77777654322    2689999999999999999999999999999999999999


Q ss_pred             cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 007046          182 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  260 (620)
Q Consensus       182 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~e  260 (620)
                      .++.+||+|||+++....... ........+|+.|+|||.+.+.   .++.++|||||||++|+|++ |..||.+.+..+
T Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  247 (323)
T 3qup_A          172 EDMTVCVADFGLSRKIYSGDY-YRQGCASKLPVKWLALESLADN---LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE  247 (323)
T ss_dssp             TTSCEEECCCCC------------------CCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             CCCCEEEeecccccccccccc-ccccccccCcccccCchhhcCC---CCCCccchhhHHHHHHHHHhCCCCCccccChHH
Confidence            999999999999987643211 1222334578899999998644   68899999999999999999 999999998888


Q ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       261 i~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +...+.... ....+..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       248 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  296 (323)
T 3qup_A          248 IYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI  296 (323)
T ss_dssp             HHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            888776543 4556788999999999999999999999999999877764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.9e-41  Score=347.99  Aligned_cols=268  Identities=21%  Similarity=0.300  Sum_probs=207.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|++....  ...++.||+|+++............++. .+++.++|+||++++++
T Consensus        15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEG--DNTGEQVAVKSLKPESGGNHIADLKKEI-EILRNLYHENIVKYKGI   91 (302)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEECTTS--SSCSEEEEEEEEC-----CCHHHHHHHH-HHHHTCCCTTBCCEEEE
T ss_pred             hhhhhhhhhhhhhccCCCCceEEEEEEEcccc--CccCeEEEEEEecccccchhHHHHHHHH-HHHHhCCCCCeeeeeeE
Confidence            44466677999999999999999999864322  3456799999998654322222222332 35666789999999999


Q ss_pred             EEEC--CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          115 SVIN--GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       115 ~~~~--~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +...  ..+|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Df  170 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDF  170 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcc
Confidence            9876  668999999985 77666644 5567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------------C
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------------S  257 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~--------------~  257 (620)
                      |+++................||+.|+|||.+.+.   .++.++|+||||+++|+|++|..|+...              .
T Consensus       171 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  247 (302)
T 4e5w_A          171 GLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS---KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM  247 (302)
T ss_dssp             TTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGG
T ss_pred             cccccccCCCcceeccCCCCCCccccCCeeecCC---CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCccccc
Confidence            9998765432222233456789999999998643   5788999999999999999999875321              1


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       258 ~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .................+..+++++.+||.+||+.||.+||++.++++.|+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          248 TVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            2222222333444556788999999999999999999999999999998865

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.7e-41  Score=355.05  Aligned_cols=271  Identities=20%  Similarity=0.287  Sum_probs=215.5

Q ss_pred             CCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeE
Q 007046           31 SNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICW  110 (620)
Q Consensus        31 s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~  110 (620)
                      ..+....++.++|++.+.||+|+||.||+|++....  ...++.||||++..........+.++.  .+++.++|+||++
T Consensus        13 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~   88 (327)
T 3lxl_A           13 ACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLG--DNTGALVAVKQLQHSGPDQQRDFQREI--QILKALHSDFIVK   88 (327)
T ss_dssp             ----CCBCCGGGEEEEEEEEEETTEEEEEEEECTTS--SSCSEEEEEEEESSCCHHHHHHHHHHH--HHHHTCCCTTBCC
T ss_pred             hcChhhhhchhhhhhhhhccCCCCeEEEEEEeccCC--CCcceEEEEEEeccCCHHHHHHHHHHH--HHHHhcCCCceeE
Confidence            345677899999999999999999999999864322  235578999999876655444444433  3566679999999


Q ss_pred             eEEEEE--ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          111 LQGISV--INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       111 l~g~~~--~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      +++++.  .....|+||||++ |+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+|
T Consensus        89 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~k  167 (327)
T 3lxl_A           89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK  167 (327)
T ss_dssp             EEEEEECSSSCEEEEEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred             EEEEEecCCCceEEEEEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEE
Confidence            999987  4567999999997 566666654 345799999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------  259 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~--------  259 (620)
                      |+|||+++................||+.|+|||++.+.   .++.++||||||+++|+|++|..||......        
T Consensus       168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  244 (327)
T 3lxl_A          168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN---IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE  244 (327)
T ss_dssp             ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred             EcccccceecccCCccceeeccCCccccccCHHHhccC---CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence            99999998764322222233445689999999998644   5788999999999999999999998653321        


Q ss_pred             -------HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          260 -------EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       260 -------ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                             .+.. ..........+..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  301 (327)
T 3lxl_A          245 RDVPALSRLLE-LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML  301 (327)
T ss_dssp             --CCHHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred             cccccHHHHHH-HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                   2233 3334445567889999999999999999999999999999988875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.3e-42  Score=357.34  Aligned_cols=266  Identities=20%  Similarity=0.333  Sum_probs=212.8

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ....+..++|++.+.||+|+||.||+|++..+++.  -...||+|.+....... ...+..+.  ..+..++|+||++++
T Consensus         6 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~kv~~K~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~   81 (325)
T 3kex_A            6 LARIFKETELRKLKVLGSGVFGTVHKGVWIPEGES--IKIPVCIKVIEDKSGRQSFQAVTDHM--LAIGSLDHAHIVRLL   81 (325)
T ss_dssp             CCCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCS--CCEEEEEEEECCTTSCSCBCSCCHHH--HHHHTCCCTTBCCEE
T ss_pred             HHhhcCHhHceeeeeeeecCCceEEEEEEcCCCce--EEEEEEEEeccccccHHHHHHHHHHH--HHHhcCCCCCcCeEE
Confidence            34567889999999999999999999998766542  23458899886443211 11222222  245667999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++. ++..++||||+. |+|.+.+.. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        82 ~~~~-~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Df  159 (325)
T 3kex_A           82 GLCP-GSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADF  159 (325)
T ss_dssp             EEEC-BSSEEEEEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSC
T ss_pred             EEEc-CCccEEEEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCC
Confidence            9986 456899999998 677777653 3467899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++...... .........||+.|+|||++.+.   .++.++|||||||++|+|+| |..||.+....++...+... .
T Consensus       160 g~a~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~  234 (325)
T 3kex_A          160 GVADLLPPDD-KQLLYSEAKTPIKWMALESIHFG---KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-E  234 (325)
T ss_dssp             SGGGGSCCCT-TCCC-----CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-C
T ss_pred             CcccccCccc-ccccccCCCCcccccChHHhccC---CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-C
Confidence            9998764322 12223455788999999999643   68999999999999999999 99999998887877766544 3


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ....+..++.++.++|.+||+.||.+||++.++++.|...
T Consensus       235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          235 RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            4556778999999999999999999999999999988774

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-41  Score=363.38  Aligned_cols=250  Identities=20%  Similarity=0.286  Sum_probs=209.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++..........+.++.  .+++.++|+||+++++++...+
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~E~--~il~~l~hpnIv~~~~~~~~~~  121 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDKYTVKNEI--SIMNQLHHPKLINLHDAFEDKY  121 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSHHHHHHHHHHH--HHHTTCCSTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCC------CEEEEEEecccchhhHHHHHHHH--HHHHhCCCcCCCeEEEEEEeCC
Confidence            368999999999999999999987665      48999999876544433333332  3567779999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc--CCcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~--~~~vkL~DFGla~~  196 (620)
                      .+|+||||++| +|.+.+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEeccccee
Confidence            99999999985 66666542 3457999999999999999999999999999999999999974  47899999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPI  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~--~~~  274 (620)
                      ...    .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+......  +..
T Consensus       201 ~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~  273 (387)
T 1kob_A          201 LNP----DEIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA  273 (387)
T ss_dssp             CCT----TSCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST
T ss_pred             cCC----CcceeeeccCCCccCchhccCC---CCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc
Confidence            632    1223345799999999999643   6889999999999999999999999999888888877665432  233


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+++++.+||.+||+.||++||++.++++
T Consensus       274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            4678999999999999999999999999997

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.5e-41  Score=355.06  Aligned_cols=258  Identities=20%  Similarity=0.248  Sum_probs=201.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccC-CCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQG-VEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~-h~nIv~l~g~  114 (620)
                      .+..++|++.+.||+|+||.||+|.+..       ++.||||++........ ...+.++..++..+.+ |+||++++++
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   77 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNEK-------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   77 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECTT-------SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeCC-------CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeee
Confidence            4567889999999999999999998632       35799999976543222 2222333333334333 3999999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +..++.+|||||+..|+|.+.+..  ...+++..+..++.||+.||.|||+++|+||||||+|||++ ++.+||+|||++
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a  154 (343)
T 3dbq_A           78 EITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA  154 (343)
T ss_dssp             EECSSEEEEEECCCSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred             EeeCCEEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccc
Confidence            999999999999888899888864  56799999999999999999999999999999999999997 688999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCC--------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHH
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAV  265 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~i  265 (620)
                      +.+.... ........+||+.|+|||++.+.        ....++.++|||||||++|+|++|..||.... ....+..+
T Consensus       155 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  233 (343)
T 3dbq_A          155 NQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI  233 (343)
T ss_dssp             CCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred             cccCccc-ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHH
Confidence            8764321 11123356899999999998531        12468899999999999999999999998743 33445555


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ........++...+.++.+||.+||+.||.+||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          234 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            5555566678888999999999999999999999999998

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.6e-41  Score=369.79  Aligned_cols=253  Identities=21%  Similarity=0.338  Sum_probs=212.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|+.++|++.+.||+|+||.||+|.+.        ++.||||+++....  ...+..+.  .+++.++||||++++++
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--------~~~vavK~~~~~~~--~~~~~~E~--~~l~~l~h~niv~~~~~  254 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYR--------GNKVAVKCIKNDAT--AQAFLAEA--SVMTQLRHSNLVQLLGV  254 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEET--------TEEEEEEEESSCTT--SHHHHHHH--HHHHTCCCTTBCCEEEE
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEec--------CCeEEEEEeCCchH--HHHHHHHH--HHHHhccCCCEEEEEEE
Confidence            34688999999999999999999999864        24799999986542  23333333  35677799999999999


Q ss_pred             EEECC-EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          115 SVING-KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       115 ~~~~~-~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +.... .+||||||++ |+|.+.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       255 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG  334 (450)
T 1k9a_A          255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG  334 (450)
T ss_dssp             EECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCC
Confidence            87765 7999999998 588888776444558999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++....      ......+|+.|+|||.+.+.   .++.++||||||+++|||+| |..||.+.+..++...+..+ ..
T Consensus       335 ~a~~~~~------~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~  404 (450)
T 1k9a_A          335 LTKEASS------TQDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YK  404 (450)
T ss_dssp             TCEECC------------CCCTTTSCHHHHHSS---CCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-CC
T ss_pred             Ccccccc------cccCCCCCcceeCHHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CC
Confidence            9985421      12234678999999999643   68999999999999999999 99999998888888777654 34


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...|..+++++.+||.+||..||++||++.++++.|+.
T Consensus       405 ~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          405 MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            56788999999999999999999999999999987765

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5e-42  Score=359.21  Aligned_cols=268  Identities=21%  Similarity=0.280  Sum_probs=206.2

Q ss_pred             hhccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCC
Q 007046           27 AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE  106 (620)
Q Consensus        27 ~~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~  106 (620)
                      ....+...+..++.++|++.+.||+|+||.||+|++.        ++.||||+++........   .+.+..++..++||
T Consensus        10 ~~~~~~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~vavK~~~~~~~~~~~---~~~E~~~l~~l~hp   78 (322)
T 3soc_A           10 SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL--------NEYVAVKIFPIQDKQSWQ---NEYEVYSLPGMKHE   78 (322)
T ss_dssp             ----CCCCCEEETTEEEEEEEEEECSTTCEEEEEEET--------TEEEEEEEECGGGHHHHH---HHHHHHTSTTCCCT
T ss_pred             cccccCccccccchhhchhhheecccCceEEEEEEEC--------CCEEEEEEeecCchHHHH---HHHHHHHHhcCCCC
Confidence            3455566677899999999999999999999999864        257999999654332221   11122345667899


Q ss_pred             ceeEeEEEEEECC----EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeee
Q 007046          107 GICWLQGISVING----KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK----------GILVL  171 (620)
Q Consensus       107 nIv~l~g~~~~~~----~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~----------gIiHr  171 (620)
                      ||+++++++....    .+|+||||++| +|.+++..   ..+++..++.++.||+.||+|||+.          +|+||
T Consensus        79 niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~  155 (322)
T 3soc_A           79 NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR  155 (322)
T ss_dssp             TBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECS
T ss_pred             CchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeC
Confidence            9999999998743    48999999985 77777643   4699999999999999999999999          99999


Q ss_pred             cccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCC--CCCCchhhHHHHHHHHHHHHhC
Q 007046          172 NLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVR--GPISFETDSWGFACSIIEMLTG  249 (620)
Q Consensus       172 DLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~--~~~s~~sDVwSlGvil~elltG  249 (620)
                      ||||+|||++.++.+||+|||+++.+.... .........||+.|+|||++.+...  ..++.++|||||||++|||+||
T Consensus       156 Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg  234 (322)
T 3soc_A          156 DIKSKNVLLKNNLTACIADFGLALKFEAGK-SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR  234 (322)
T ss_dssp             CCSGGGEEECTTCCEEECCCTTCEEECTTS-CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCChHhEEECCCCeEEEccCCccccccccc-CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence            999999999999999999999998764322 1223344689999999999864211  2456688999999999999999


Q ss_pred             CCCCCCC----------------CHHHHHHHHHhccCCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          250 VQPRCGR----------------SVDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       250 ~~Pf~~~----------------~~~ei~~~i~~~~~~~~~p~-----~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +.||.+.                ...++...+......+.++.     ..++++.+||.+||+.||++|||+.++++.|+
T Consensus       235 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  314 (322)
T 3soc_A          235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT  314 (322)
T ss_dssp             BTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            9999753                22334444433333443332     23456999999999999999999999999776


Q ss_pred             h
Q 007046          309 S  309 (620)
Q Consensus       309 ~  309 (620)
                      .
T Consensus       315 ~  315 (322)
T 3soc_A          315 Q  315 (322)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=353.08  Aligned_cols=263  Identities=18%  Similarity=0.253  Sum_probs=191.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+...+|++.+.||+|+||.||+|++..++      +.||||++..........+..+. ..+.++.+|+||+++++++.
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~e~-~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSG------REYALKRLLSNEEEKNRAIIQEV-CFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEEETTTC------CEEEEEEEEESSHHHHHHHHHHH-HHHHHHTTSTTBCCEEEEEE
T ss_pred             eccCceEEEEEEEccCCceEEEEEEECCCC------cEEEEEEecCCchHHHHHHHHHH-HHHHHhccCCChhhcccccc
Confidence            356678999999999999999999987655      48999999766554444444433 34455557999999999985


Q ss_pred             E--------CCEEEEEEecCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEccCCc
Q 007046          117 I--------NGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADR  185 (620)
Q Consensus       117 ~--------~~~~~IVmE~~~GsLld~l~~~-~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld~~~~  185 (620)
                      .        ...+|+||||+.|+|.+.+... ..+++++..++.++.||+.||.|||+.+  |+||||||+|||++.++.
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSC
T ss_pred             ccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCC
Confidence            3        3458999999999999988654 3467999999999999999999999999  999999999999999999


Q ss_pred             EEEeccCCcccccCCCCCC---------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 007046          186 AVLGDVGIPHLLLGIPLPS---------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR  256 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~---------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~  256 (620)
                      +||+|||+++.........         .......||+.|+|||++.......++.++|||||||++|+|++|..||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            9999999998764322111         1112456999999999985433456889999999999999999999999765


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ....+..    .......+..++..+.+||.+||+.||.+||++.++++.|...
T Consensus       257 ~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          257 AKLRIVN----GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHhhc----CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            5444332    2333444667888999999999999999999999999977763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2e-41  Score=372.05  Aligned_cols=259  Identities=24%  Similarity=0.397  Sum_probs=216.5

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|..++|++.+.||+|+||.||+|.+..       +..||||+++..... ...+..+.  .+++.++||||++++++
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~-------~~~vavK~~~~~~~~-~~~~~~E~--~~l~~l~h~~iv~l~~~  251 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNK-------HTKVAVKTMKPGSMS-VEAFLAEA--NVMKTLQHDKLVKLHAV  251 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETT-------TEEEEEEEECTTSBC-HHHHHHHH--HHHTTCCCTTBCCEEEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECC-------ccEEEEEEecCCCcc-HHHHHHHH--HHHhhCCCCCEeeEEEE
Confidence            345888999999999999999999998753       247999999865432 33343333  35677899999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +. .+.+||||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       252 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          252 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             EC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred             Ee-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCC
Confidence            86 667999999998 6888887654445789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||++..   +.++.++|||||||++|||+| |..||.+.+..++...+.... ..
T Consensus       331 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~  404 (454)
T 1qcf_A          331 ARVIEDNE--YTAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-RM  404 (454)
T ss_dssp             GGGBCCHH--HHTTCSSSSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CC
T ss_pred             ceEcCCCc--eeccCCCcccccccCHHHhcc---CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC
Confidence            98763211  111233457889999999864   368999999999999999999 999999999988888876554 44


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.|..+++++.+||.+||+.||++||++.+|++.|+..
T Consensus       405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.1e-41  Score=342.93  Aligned_cols=247  Identities=19%  Similarity=0.256  Sum_probs=207.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|.+..++      ..||+|++..........+.++.  .+++.++||||+++++++...+.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~a~k~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTR------IRRAAKKIPKYFVEDVDRFKQEI--EIMKSLDHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCSCHHHHHHHH--HHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCC------cEEEEEeehhhccchHHHHHHHH--HHHHhCCCCCEeeEEEEEecCCe
Confidence            56999999999999999999987665      47999999765444444444433  25566799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCccc
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHL  196 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla~~  196 (620)
                      .|+||||++| +|.+.+..  ...+++..+..++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            9999999985 66676653  4579999999999999999999999999999999999999   7889999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC-
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-  275 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p-  275 (620)
                      ...    ........||+.|+|||.+.+    .++.++|+||||+++|+|++|..||...+..+....+.......+.. 
T Consensus       159 ~~~----~~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  230 (277)
T 3f3z_A          159 FKP----GKMMRTKVGTPYYVSPQVLEG----LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKD  230 (277)
T ss_dssp             CCT----TSCBCCCCSCTTTCCHHHHTT----CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHH
T ss_pred             ccC----ccchhccCCCCCccChHHhcc----cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchh
Confidence            642    223345579999999999853    48889999999999999999999999999888888877654332211 


Q ss_pred             -CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 -SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 -~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ..+++++.++|.+||+.||++||++.++++
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          231 WLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             378999999999999999999999999987

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.6e-41  Score=347.64  Aligned_cols=261  Identities=20%  Similarity=0.362  Sum_probs=218.8

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....+..++|++.+.||+|+||.||+|.+..++      ..||+|+++..... ...+..+.  .+++.++|+||+++++
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~-~~~~~~E~--~~l~~l~h~~i~~~~~   76 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTME-VEEFLKEA--AVMKEIKHPNLVQLLG   76 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGT------EEEEEEEECSCSTH-HHHHHHHH--HHHHHCCCTTBCCEEE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCC------EEEEEEecCcCHHH-HHHHHHHH--HHHHhCCCCCEeeEEE
Confidence            456688999999999999999999999987654      58999999765433 23333332  3556678999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..++..|+||||++ |+|.+.+.......+++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||
T Consensus        77 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg  156 (288)
T 3kfa_A           77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG  156 (288)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCc
Confidence            9999999999999999 578888766556779999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++......  ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..++...+... ..
T Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~-~~  230 (288)
T 3kfa_A          157 LSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YR  230 (288)
T ss_dssp             GGGTSCSSS--SEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CC
T ss_pred             cceeccCCc--cccccCCccccCcCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc-CC
Confidence            998764321  1122334578899999998643   68899999999999999999 99999998888777766543 44


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+..+++++.+++.+||..||.+||++.++++.|+.
T Consensus       231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            55678899999999999999999999999999997765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.8e-41  Score=353.45  Aligned_cols=271  Identities=18%  Similarity=0.249  Sum_probs=213.8

Q ss_pred             hccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc
Q 007046           28 VATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        28 ~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      ...+...-+.++.++|++.+.||+|+||.||+|++..++..    ..||+|.++..........+.++..++.++.+|||
T Consensus        12 ~~~~~~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~   87 (327)
T 1fvr_A           12 NNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLR----MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN   87 (327)
T ss_dssp             ----CCCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEE----EEEEEEEEECC------CHHHHHHHHHTTCCCCTT
T ss_pred             CCCCCcccccccHHHccceeeeecCCCceEEEEEEccCCcc----cceeeeeeccccchHHHHHHHHHHHHHHhccCCCc
Confidence            44455567778999999999999999999999998766531    24599999764433322233333333334449999


Q ss_pred             eeEeEEEEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeec
Q 007046          108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLN  172 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrD  172 (620)
                      |+++++++...+..|+||||++ |+|.+++....              ...+++..++.++.||+.||.|||++||+|||
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  167 (327)
T 1fvr_A           88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  167 (327)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999999999999999999998 57777775421              24799999999999999999999999999999


Q ss_pred             ccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 007046          173 LKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQ  251 (620)
Q Consensus       173 LKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~  251 (620)
                      |||+|||++.++.+||+|||+++....    ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..
T Consensus       168 lkp~NIl~~~~~~~kL~Dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~  240 (327)
T 1fvr_A          168 LAARNILVGENYVAKIADFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGT  240 (327)
T ss_dssp             CSGGGEEECGGGCEEECCTTCEESSCE----ECCC----CCTTTCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CccceEEEcCCCeEEEcccCcCccccc----cccccCCCCCccccChhhhccc---cCCchhcchHHHHHHHHHHcCCCC
Confidence            999999999999999999999874321    1122334678999999998643   57889999999999999998 999


Q ss_pred             CCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          252 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       252 Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ||.+.+..++...+... .....+..+++++.+||.+||+.||++||++.++++.|...
T Consensus       241 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          241 PYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             TTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999988887776543 34456778999999999999999999999999999977764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=5.1e-41  Score=346.67  Aligned_cols=254  Identities=19%  Similarity=0.325  Sum_probs=208.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh----HHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED----RMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~----~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|+++.....    ....+..+.  .+++.++|+||+++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~~   75 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETL------CRRAVKILKKKKLRRIPNGEANVKKEI--QLLRRLRHKNVIQLVDVL   75 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTC------CEEEEEEECHHHHHHSTTHHHHHHHHH--HHHTTCCCTTBCCEEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCC------cEEEEEEeccccccccchhHHHHHHHH--HHHHhcCCCCeeEEEEEE
Confidence            368999999999999999999976554      48999999754321    122222222  356667899999999998


Q ss_pred             E--ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          116 V--INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       116 ~--~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      .  .....|+||||+++++.+.+.......+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus        76 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C           76 YNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             ECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccc
Confidence            4  34578999999998888888776678899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +....... .........||+.|+|||++.+. ...++.++|+||||+++|+|++|..||.+.+..++...+...  ...
T Consensus       156 ~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~  231 (305)
T 2wtk_C          156 AEALHPFA-ADDTCRTSQGSPAFQPPEIANGL-DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYA  231 (305)
T ss_dssp             CEECCTTC-SSCEECCCCSCGGGCCHHHHTCC-SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCC
T ss_pred             ccccCccc-cccccccCCCCCCCcChhhccCc-ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CCC
Confidence            98763211 11222345799999999998643 223477999999999999999999999999888888877654  345


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++..+++++.++|.+||..||++||++.++++
T Consensus       232 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            67889999999999999999999999999998

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.6e-41  Score=347.80  Aligned_cols=260  Identities=17%  Similarity=0.268  Sum_probs=210.1

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .|..++|++.+.||+|+||.||+|++..+++. ......||+|++..........+.++.  .+++.++||||+++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~   81 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA--SMMSKLSHKHLVLNYGVC   81 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHH--HHHHTSCCTTBCCEEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHH--HHHHhCCCCCEeEEEEEE
Confidence            46778999999999999999999998766531 112357999999765544444444433  356777899999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc--------E
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--------A  186 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~--------v  186 (620)
                      ..++..|+||||++ |+|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.        +
T Consensus        82 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           82 VCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             CCTTCCEEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EeCCCCEEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            99999999999998 577776654 4445999999999999999999999999999999999999998887        9


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i  265 (620)
                      ||+|||+++...       ......||+.|+|||++.+.  ..++.++||||||+++|+|++ +.+||...+........
T Consensus       161 kl~Dfg~~~~~~-------~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~  231 (289)
T 4fvq_A          161 KLSDPGISITVL-------PKDILQERIPWVPPECIENP--KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY  231 (289)
T ss_dssp             EECCCCSCTTTS-------CHHHHHHTTTTSCHHHHHCG--GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             eeccCccccccc-------CccccCCcCcccCHHHhCCC--CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence            999999986542       11234689999999998642  358899999999999999999 55666666655554433


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .   ....++...++++.++|.+||+.||++||++.++++.|+...
T Consensus       232 ~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          232 E---DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             H---TTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             h---ccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            3   234456778899999999999999999999999999998753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1e-40  Score=364.12  Aligned_cols=270  Identities=20%  Similarity=0.254  Sum_probs=201.5

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      +.+--.++|++.+.||+|+||.||+|++..++      +.||||+++......  ...+..+.  .+++.++|+||++++
T Consensus        20 ~~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~nIv~l~   91 (432)
T 3n9x_A           20 KNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTE------KNVAIKKVNRMFEDLIDCKRILREI--TILNRLKSDYIIRLY   91 (432)
T ss_dssp             GGCCCCTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECSTTTSHHHHHHHHHHH--HHHHHCCCTTBCCEE
T ss_pred             CcceecCCEEEEEEEeecCCEEEEEEEECCCC------cEEEEEEeCchhcChHHHHHHHHHH--HHHHHcCCCCcceEE
Confidence            34445789999999999999999999987665      489999997644322  22222322  356667899999999


Q ss_pred             EEEEEC-----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEE
Q 007046          113 GISVIN-----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       113 g~~~~~-----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vk  187 (620)
                      +++...     ..+||||||++|+|.+.+.  ....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+|
T Consensus        92 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~k  169 (432)
T 3n9x_A           92 DLIIPDDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVK  169 (432)
T ss_dssp             EECCCSCTTTCCCEEEEEECCSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EEEecCCCCcCCeEEEEEecCCcCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEE
Confidence            998765     5799999999998888875  456799999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccCCCCC-------------------CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLP-------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT  248 (620)
Q Consensus       188 L~DFGla~~~~~~~~~-------------------~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt  248 (620)
                      |+|||+++........                   .......+||+.|+|||++..  ...++.++|||||||++|||++
T Consensus       170 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~~~DiwSlG~il~ell~  247 (432)
T 3n9x_A          170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL--QENYTKSIDIWSTGCIFAELLN  247 (432)
T ss_dssp             ECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT--CSCCCTHHHHHHHHHHHHHHHT
T ss_pred             EccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc--CCCCCcccccchHHHHHHHHHh
Confidence            9999999876432111                   012356789999999998642  2358999999999999999998


Q ss_pred             C-----------CCCCCCCC-----------------HHHHHHHHHhccC------------------------CCCC--
Q 007046          249 G-----------VQPRCGRS-----------------VDEIYDAVVRRQE------------------------IPPI--  274 (620)
Q Consensus       249 G-----------~~Pf~~~~-----------------~~ei~~~i~~~~~------------------------~~~~--  274 (620)
                      |           .++|.+.+                 ..+.+..+.....                        ....  
T Consensus       248 g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (432)
T 3n9x_A          248 MLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINL  327 (432)
T ss_dssp             TCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCH
T ss_pred             cccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCH
Confidence            4           44444432                 1111222211111                        1111  


Q ss_pred             ---CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCCCCC
Q 007046          275 ---PSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGH  316 (620)
Q Consensus       275 ---p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~~~~  316 (620)
                         ...+++++.+||.+||..||++|||++|+++ .+.....|...
T Consensus       328 ~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~  373 (432)
T 3n9x_A          328 KQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL  373 (432)
T ss_dssp             HHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTT
T ss_pred             HHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCccc
Confidence               1468999999999999999999999999998 44444444433

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4e-41  Score=371.21  Aligned_cols=247  Identities=21%  Similarity=0.261  Sum_probs=197.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.......  ...+.++.  .+++.++||||+++++++..
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpnIv~l~~~~~~  132 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTP  132 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEESGGGSHHHHHHHHHHH--HHHHHCCCTTBCCCSEEECS
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCC------CEEEEEEECccccChHHHHHHHHHH--HHHHhCCCCCCCcEEEEEcc
Confidence            578999999999999999999987665      489999997653222  22222222  35677799999999999865


Q ss_pred             C------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          118 N------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       118 ~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .      ..+||||||++|++.+.+.    ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus       133 ~~~~~~~~~~~lv~E~~~~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DF  208 (464)
T 3ttj_A          133 QKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  208 (464)
T ss_dssp             CCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred             CCccccCCeEEEEEeCCCCCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEE
Confidence            4      4689999999998877763    35899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....    .......+||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+..+.+..+......
T Consensus       209 G~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~  281 (464)
T 3ttj_A          209 GLARTAGT----SFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  281 (464)
T ss_dssp             CCC---------CCCC----CCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             EeeeecCC----CcccCCCcccccccCHHHHcCC---CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99987632    2234557899999999999754   6889999999999999999999999999887777776553222


Q ss_pred             CC-----------------------------CCCC-----------CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PP-----------------------------IPSG-----------LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~-----------------------------~p~~-----------~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.                             ++..           .++++.+||.+||..||++|||++|+++
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            10                             0000           1567999999999999999999999998

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.1e-41  Score=348.97  Aligned_cols=266  Identities=24%  Similarity=0.368  Sum_probs=208.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|++.....   ....||||+++....   .....+..+.  ..++.++|+||+++
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~   86 (291)
T 1u46_A           12 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSG---KTVSVAVKCLKPDVLSQPEAMDDFIREV--NAMHSLDHRNLIRL   86 (291)
T ss_dssp             CEECCGGGEEEEEECC----CCCEEEEEECTTS---CEEEEEEEC--------CHHHHHHHHHH--HHHHHCCCTTBCCE
T ss_pred             ccccchhHeeeeeeecCCCceeEEEEEeccCCC---ceeEEEEEEEccCccCCHHHHHHHHHHH--HHHHhCCCCCcccE
Confidence            456778899999999999999999998754332   234699999976432   2223333332  24556689999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++..+. .++||||++ |+|.+.+.. ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|
T Consensus        87 ~~~~~~~~-~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~D  164 (291)
T 1u46_A           87 YGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD  164 (291)
T ss_dssp             EEEECSSS-CEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECC
T ss_pred             EEEEccCC-ceeeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcc
Confidence            99987655 899999998 577777764 346799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||+++................+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..++...+....
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~  241 (291)
T 1u46_A          165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG  241 (291)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC
T ss_pred             ccccccccccccchhhhccCCCCceeeCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC
Confidence            99998764322211223345688899999998643   57889999999999999999 999999999988888887766


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .....+..+++++.++|.+||..||++||++.++++.|...
T Consensus       242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          242 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence            66677889999999999999999999999999999988764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.7e-41  Score=376.88  Aligned_cols=261  Identities=21%  Similarity=0.360  Sum_probs=220.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|..++|++.++||+|+||.||+|.+..++      ..||||+++..... ...+.++.  .+++.++||||++++++
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~------~~vavK~~~~~~~~-~~~~~~E~--~~l~~l~hpniv~l~~~  284 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTME-VEEFLKEA--AVMKEIKHPNLVQLLGV  284 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGT------EEEEEEECCSSSSC-HHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCC------eEEEEEEecCcccc-hHHHHHHH--HHHHhcCCCCEeeEEEE
Confidence            45678899999999999999999999987554      47999999865433 23333333  35566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |...+.+||||||++ |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       285 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  364 (495)
T 1opk_A          285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL  364 (495)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             EecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeeccc
Confidence            998889999999998 6888888754556799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||++.+.   .++.++|||||||++|||+| |..||.+.+..++.+.+... ...
T Consensus       365 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~  438 (495)
T 1opk_A          365 SRLMTGDT--YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRM  438 (495)
T ss_dssp             EECCTTCC--EECCTTCCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCC
T ss_pred             ceeccCCc--eeecCCCcCCcceeCHhHHhcC---CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            98764321  1122334578899999998643   68899999999999999999 99999999888887766543 455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+..+++++.+||.+||+.||++||++.+|++.|+..
T Consensus       439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            67889999999999999999999999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.6e-41  Score=352.45  Aligned_cols=265  Identities=19%  Similarity=0.323  Sum_probs=209.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ...+..++|++.+.||+|+||.||+|.+..+++.  -...||+|.++...... ...+..+.  .+++.++||||+++++
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--~~~kv~iK~~~~~~~~~~~~~~~~E~--~~l~~l~hp~iv~~~~   84 (327)
T 3lzb_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEILDEA--YVMASVDNPHVCRLLG   84 (327)
T ss_dssp             CEECCTTTEEEEEEEEECSSEEEEEEEECCTTCS--CCEEEEEEEECCCSSCCCHHHHHHHH--HHHTTCCBTTBCCCCE
T ss_pred             hcccCHhHceEEEEeeeCCCeEEEEEEEcCCCce--EEEEEEEEeeccccCHHHHHHHHHHH--HHHHhCCCCCeeEEEE
Confidence            4457889999999999999999999998776542  22357888886543322 23333332  3567779999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..+. .++||||+. |+|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||
T Consensus        85 ~~~~~~-~~~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG  162 (327)
T 3lzb_A           85 ICLTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG  162 (327)
T ss_dssp             EEESSS-EEEEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTT
T ss_pred             EEecCC-ceEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCc
Confidence            998765 788889988 677777654 45679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++...... .........||+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+.+..++...+... ..
T Consensus       163 ~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-~~  237 (327)
T 3lzb_A          163 LAKLLGAEE-KEYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ER  237 (327)
T ss_dssp             C-----------------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CC
T ss_pred             ceeEccCcc-ccccccCCCccccccCHHHHcCC---CCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CC
Confidence            998764321 12222344678899999998744   68999999999999999999 99999998888877766544 44


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+..++.++.++|.+||+.||.+||++.++++.|...
T Consensus       238 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          238 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            556788999999999999999999999999999988764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=5e-41  Score=345.45  Aligned_cols=263  Identities=20%  Similarity=0.280  Sum_probs=209.0

Q ss_pred             CCCcCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...++.++|++.+ .||+|+||.||+|.+...    ..++.||||+++....... ...+.++. .+++.++||||++++
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~   84 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMK----KVVKTVAVKILKNEANDPALKDELLAEA-NVMQQLDNPYIVRMI   84 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECS----SSEEEEEEEEEC-----CHHHHHHHHHH-HHHHTCCCTTBCCEE
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCC----CceeeEEEEeecccccCHHHHHHHHHHH-HHHHhCCCCCEEEEE
Confidence            3457778999999 999999999999976432    2346899999976543221 22222222 356667999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++ ..+..|+||||++ ++|.+.+.  ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        85 ~~~-~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Df  161 (291)
T 1xbb_A           85 GIC-EAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF  161 (291)
T ss_dssp             EEE-ESSSEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             EEE-CCCCcEEEEEeCCCCCHHHHHH--hCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccC
Confidence            998 5677899999998 56666665  3567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++................||+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..++...+... .
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~  237 (291)
T 1xbb_A          162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-E  237 (291)
T ss_dssp             TTCEECCTTCSEEEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-C
T ss_pred             CcceeeccCCCcccccccCCCCceeeChHHhccC---CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-C
Confidence            9998764322211222334578899999998643   57889999999999999999 99999999888887776544 3


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+..+..+++++.++|.+||+.||++||++.++++.|+.
T Consensus       238 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          238 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            456788999999999999999999999999999987765

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.1e-40  Score=340.74  Aligned_cols=263  Identities=21%  Similarity=0.308  Sum_probs=210.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+.....   .+..||+|.++..........+.++. .+++.++||||++++++
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~   81 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEA-VIMKNLDHPHIVKLIGI   81 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTC---CEEEEEEEECCTTSCHHHHHHHHHHH-HHHHHHCCTTBCCEEEE
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCC---CcceEEEEecccccCchHHHHHHHHH-HHHHhCCCCCcceEEEE
Confidence            456788999999999999999999999765432   34579999998764433333333333 24555689999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.. +..|+||||++ ++|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~-~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  159 (281)
T 3cc6_A           82 IEE-EPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL  159 (281)
T ss_dssp             ECS-SSCEEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred             EcC-CCCEEEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCC
Confidence            764 45789999999 566666654 456799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |+.||......+....+... ...
T Consensus       160 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~-~~~  233 (281)
T 3cc6_A          160 SRYIEDED--YYKASVTRLPIKWMSPESINFR---RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-DRL  233 (281)
T ss_dssp             GGCC-----------CCCCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT-CCC
T ss_pred             Cccccccc--ccccccCCCCcceeCchhhccC---CCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC-CCC
Confidence            98764321  1122344678899999998643   68899999999999999998 99999888877777766544 344


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+..+++++.++|.+||..||++||++.++++.|..
T Consensus       234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence            5678899999999999999999999999999997765

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=8.5e-41  Score=343.32  Aligned_cols=250  Identities=22%  Similarity=0.326  Sum_probs=201.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.++||+|+||.||+|.+..++      ..||+|++...........+.++. .+++.++||||+++++++...+.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~~~~   94 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSG------LERVIKTINKDRSQVPMEQIEAEI-EVLKSLDHPNIIKIFEVFEDYHN   94 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEGGGCCSCHHHHHHHH-HHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hheeecceeccCCCeEEEEEEEccCC------ceEEEEEeeccccchhHHHHHHHH-HHHHhCCCchHHhHHHheecCCe
Confidence            67999999999999999999986655      479999997654322222222322 35667799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCc
Q 007046          121 ICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIP  194 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla  194 (620)
                      .|+||||++| +|.+.+...  ....+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            9999999984 777777543  34789999999999999999999999999999999999999   45678999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-  273 (620)
                      +....    ........||+.|+|||++.    +.++.++|+||||+++|+|++|..||.+.+..++...+........ 
T Consensus       175 ~~~~~----~~~~~~~~~t~~y~aPE~~~----~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (285)
T 3is5_A          175 ELFKS----DEHSTNAAGTALYMAPEVFK----RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAV  246 (285)
T ss_dssp             CC--------------CTTGGGCCHHHHT----TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC
T ss_pred             eecCC----cccCcCcccccCcCChHHhc----cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccccc
Confidence            76543    12234567999999999985    3588999999999999999999999999988887776655433222 


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+++++.+||.+||+.||++||++.++++
T Consensus       247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            23458999999999999999999999999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.8e-41  Score=345.64  Aligned_cols=262  Identities=19%  Similarity=0.250  Sum_probs=202.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE--
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV--  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~--  116 (620)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||++..........+..+.  .+++.++||||+++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~   80 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCD------KRVAIKKIVLTDPQSVKHALREI--KIIRRLDHDNIVKVFEILGPS   80 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTT------EEEEEEEEECCSHHHHHHHHHHH--HHHHTCCCTTBCCEEEEECTT
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCC------eEEEEEEEecCChHHHHHHHHHH--HHHHhcCCCCeeEEEEecccc
Confidence            3578999999999999999999986655      58999999866544444444433  3566779999999999873  


Q ss_pred             ------------ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc-cC
Q 007046          117 ------------INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EA  183 (620)
Q Consensus       117 ------------~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld-~~  183 (620)
                                  .....|+||||++|+|.+.+   ..+++++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCSEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             ccccccccccccccCceeEEeeccCCCHHHHh---hcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence                        34689999999999887776   356799999999999999999999999999999999999997 56


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      +.+||+|||+++................||+.|+|||.+.+  ...++.++|+||||+++|+|++|+.||.+.+..+.+.
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  235 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS--PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ  235 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC--TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhcC--cccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            79999999999876432222233445578999999998753  2368899999999999999999999999988777766


Q ss_pred             HHHhccCC-----------------------C-----CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCCC
Q 007046          264 AVVRRQEI-----------------------P-----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGW  313 (620)
Q Consensus       264 ~i~~~~~~-----------------------~-----~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~~  313 (620)
                      .+......                       +     ..+..+++++.++|.+||+.||++||++.++++ .+.+...|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            66543211                       0     122468999999999999999999999999998 44444433

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-41  Score=354.68  Aligned_cols=253  Identities=22%  Similarity=0.268  Sum_probs=201.1

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-----HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-----RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-----~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..++|++.+.||+|+||.||+|++..++      +.||||+++.......     ..+.++ . .+++.++|+||+++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~E-~-~~l~~l~h~~iv~~~~   79 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTN------QIVAIKKIKLGHRSEAKDGINRTALRE-I-KLLQELSHPNIIGLLD   79 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCC------SEEEEEEC------------CTHHHHH-H-HHHHHCCCTTBCCEEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCC------cEEEEEEEecCCcchhhhhhhHHHHHH-H-HHHhhCCCCCCCeEEE
Confidence            3578999999999999999999976554      4899999975432211     112222 2 2456678999999999


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      ++...+..|+||||++|++.+.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        80 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           80 AFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             EECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             EEeeCCceEEEEEcCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            9999999999999999988777753 446789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++.+..   .........||+.|+|||++.+.  ..++.++|+|||||++|+|++|.+||.+.+..+.+..+......+.
T Consensus       159 a~~~~~---~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~  233 (346)
T 1ua2_A          159 AKSFGS---PNRAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT  233 (346)
T ss_dssp             GSTTTS---CCCCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             ceeccC---CcccCCcccccccccCchHhhCC--CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            987643   22334456899999999998642  2478899999999999999999999999988887777765322211


Q ss_pred             --------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 --------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 --------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                +...+++++.+||.+||..||++||++.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          234 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             TTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence                                      01456799999999999999999999999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.4e-41  Score=355.40  Aligned_cols=256  Identities=22%  Similarity=0.250  Sum_probs=206.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|++.++||+|+||.||+|++..++      +.||||++.......  ...+..+.  .+++.++|+||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~   86 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALKKVLMENEKEGFPITALREI--KILQLLKHENVVNLIEICR   86 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTC------CEEEEEECCCSSCSSSSCHHHHHHH--HHHHHCCCTTBCCEEEEEE
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCC------CEEEEEEEecccccccchHHHHHHH--HHHHhccCCCcccHhheee
Confidence            3478999999999999999999987665      489999986544322  12222222  3556678999999999998


Q ss_pred             E--------CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          117 I--------NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       117 ~--------~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      .        .+.+||||||++|++.+.+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl  165 (351)
T 3mi9_A           87 TKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL  165 (351)
T ss_dssp             EC--------CEEEEEEECCSEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             ccccccccCCceEEEEEeccCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEE
Confidence            7        456899999999998888864 3467999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          189 GDVGIPHLLLGIPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      +|||+++.+..... .........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  243 (351)
T 3mi9_A          166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ  243 (351)
T ss_dssp             CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             ccchhcccccccccccccccCCcccccCccCchhhcCC--CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            99999987642221 22334556899999999998642  3578999999999999999999999999988877776654


Q ss_pred             ccCCCC--CCCC----------------------------CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPP--IPSG----------------------------LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~--~p~~----------------------------~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......  ....                            .++++.+||.+||+.||++||++.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            332211  1111                            2678999999999999999999999998

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.7e-41  Score=339.31  Aligned_cols=257  Identities=20%  Similarity=0.323  Sum_probs=213.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..|++++|++.+.||+|+||.||+|.+..       +..||+|+++...... ..+.++.  .+++.++||||+++++++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~vaiK~~~~~~~~~-~~~~~e~--~~l~~l~h~~i~~~~~~~   72 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLN-------KDKVAIKTIREGAMSE-EDFIEEA--EVMMKLSHPKLVQLYGVC   72 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETT-------TEEEEEEEECTTTBCH-HHHHHHH--HHHHTCCCTTBCCEEEEE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecC-------CCeEEEEEccccCCCH-HHHHHHH--HHHHhCCCCCEeeEEEEE
Confidence            45788999999999999999999998752       2479999998655432 2233322  255667899999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      ..++..|+||||++| +|.+.+.. ....+++..+..++.||+.||.|||+++++||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~  151 (267)
T 3t9t_A           73 LEQAPICLVTEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT  151 (267)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred             ccCCCeEEEEeCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccc
Confidence            998899999999985 66666653 4567999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +......  ........||+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..++...+.... ...
T Consensus       152 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~-~~~  225 (267)
T 3t9t_A          152 RFVLDDQ--YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-RLY  225 (267)
T ss_dssp             GGBCCHH--HHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCC
T ss_pred             ccccccc--ccccccccccccccChhhhcCC---CccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC-cCC
Confidence            8653211  1122334678899999998643   68899999999999999999 999999998888888776543 445


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+..+++++.+++.+||+.||++||++.++++.|..
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            677889999999999999999999999999998765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=7.8e-41  Score=360.52  Aligned_cols=259  Identities=19%  Similarity=0.245  Sum_probs=203.8

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccC-CCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQG-VEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~-h~nIv~l~g  113 (620)
                      ..+..++|++.+.||+|+||.||+|.+..       ++.||||++...... .....+.++..++..+.+ |+||+++++
T Consensus        51 ~~~~~~~y~~~~~LG~G~fg~Vy~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~  123 (390)
T 2zmd_A           51 ISVKGRIYSILKQIGSGGSSKVFQVLNEK-------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD  123 (390)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTT-------CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             ccccCCceEEEEEEccCCCeEEEEEEcCC-------CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEE
Confidence            34556679999999999999999998543       357999999765432 222223333334444443 799999999


Q ss_pred             EEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          114 ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      ++..++.+|||||+..++|.+++..  ...+++..+..++.||+.||.|||+++|+||||||+|||++ ++.+||+|||+
T Consensus       124 ~~~~~~~~~lv~E~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~  200 (390)
T 2zmd_A          124 YEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI  200 (390)
T ss_dssp             EEECSSEEEEEEECCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred             EEecCCEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCc
Confidence            9999999999999777888888864  45789999999999999999999999999999999999995 68999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCC--------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDA  264 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~~  264 (620)
                      ++.+.... ........+||+.|||||++.+.        ....++.++|||||||++|||++|..||.... ....+..
T Consensus       201 a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~  279 (390)
T 2zmd_A          201 ANQMQPDT-TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  279 (390)
T ss_dssp             SCCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred             cccccCCC-ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH
Confidence            98764211 11123456899999999998642        12358899999999999999999999998753 3455566


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +........++...+.++.+||.+||+.||++||++.++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          280 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            66555556677888999999999999999999999999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.6e-41  Score=372.74  Aligned_cols=254  Identities=25%  Similarity=0.333  Sum_probs=212.5

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|++..++      +.||||+++......  ....+.++. .+++.++||||++++
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~~Ei-~~l~~l~HpnIv~l~   82 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRREI-QNLKLFRHPHIIKLY   82 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETTTC------CEEEEEEEEHHHHHHTTTHHHHHHHH-HHHTTCCCTTBCCEE
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEEhhhccCHHHHHHHHHHH-HHHHhCCCCCCCcEE
Confidence            45566789999999999999999999987665      489999997543221  111222222 356778999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+.+||||||++ |+|.+.+.  ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        83 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DF  160 (476)
T 2y94_A           83 QVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF  160 (476)
T ss_dssp             EEEECSSEEEEEEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEECCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEec
Confidence            99999999999999997 56666664  4578999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....    .......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+.+..+++..+....  
T Consensus       161 G~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--  232 (476)
T 2y94_A          161 GLSNMMSD----GEFLRTSCGSPNYAAPEVISGRL--YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--  232 (476)
T ss_dssp             SSCEECCT----TCCBCCCCSCSTTCCHHHHTTCC--BCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC--
T ss_pred             cchhhccc----cccccccCCCcCeEChhhccCCC--CCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC--
Confidence            99987643    22334568999999999987541  23679999999999999999999999988888888886543  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...|..+++++.+||.+||..||.+||++.++++
T Consensus       233 ~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          233 FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            3457789999999999999999999999999997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=4.8e-41  Score=348.94  Aligned_cols=257  Identities=18%  Similarity=0.271  Sum_probs=198.2

Q ss_pred             CCCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .++|++. +.||+|+||.||+|.+..++      +.||||+++.........+.++ ...+.++.+||||+++++++..+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~E-~~~l~~~~~h~~i~~~~~~~~~~   83 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITS------QEYAVKIIEKQPGHIRSRVFRE-VEMLYQCQGHRNVLELIEFFEEE   83 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSC------CEEEEEEEECCSSCCHHHHHHH-HHHHHHTCCCTTBCCEEEEEEET
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCC------cEEEEEEEeeCcchhHHHHHHH-HHHHHHhcCCCCeeeEEEEEeeC
Confidence            4679996 78999999999999976554      4899999976654333334333 33455667899999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc---EEEeccCCc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~---vkL~DFGla  194 (620)
                      +.+|+||||++ |+|.+.+..  ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.   +||+|||++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             CEEEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            99999999998 677777764  357899999999999999999999999999999999999998776   999999998


Q ss_pred             ccccCCCC----CCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------
Q 007046          195 HLLLGIPL----PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRS-----------  257 (620)
Q Consensus       195 ~~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-----------  257 (620)
                      +.......    ........+||+.|+|||++.+..  ...++.++|||||||++|+|++|..||.+..           
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred             cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence            76532111    111223457999999999985310  1247789999999999999999999998754           


Q ss_pred             ----HHHHHHHHHhccCCCCC--CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          258 ----VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       258 ----~~ei~~~i~~~~~~~~~--p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                          ...+...+.......+.  ...+++++.+||.+||+.||++||++.++++
T Consensus       242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                23455555544322211  1468999999999999999999999999998

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=4e-41  Score=350.45  Aligned_cols=269  Identities=19%  Similarity=0.307  Sum_probs=218.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|++..... ...++.||||+++..........+.++. .+++.++|+||++++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~   96 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVK-DEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHVVRLLGV   96 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEET-TEEEEEEEEEECCTTSCHHHHHHHHHHH-HHGGGCCCTTBCCEEEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccC-CCCceEEEEEecccccCHHHHHHHHHHH-HHHHhcCCCCEeeeEEE
Confidence            345677899999999999999999998764221 1345689999998655433332223322 35667799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR  185 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~--------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~  185 (620)
                      +...+..|+||||++ |+|.+.+....        ...+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~  176 (322)
T 1p4o_A           97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  176 (322)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred             EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence            998889999999998 57877775432        146799999999999999999999999999999999999999999


Q ss_pred             EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA  264 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~  264 (620)
                      +||+|||+++....... ........||+.|+|||++.+.   .++.++|+||||+++|+|++ |..||.+.+..++...
T Consensus       177 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  252 (322)
T 1p4o_A          177 VKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF  252 (322)
T ss_dssp             EEECCTTCCCGGGGGGC-EEGGGSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred             EEECcCccccccccccc-cccccCCCCCCCccChhhhccC---CCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence            99999999986532111 1112234678999999998643   68899999999999999999 8999999988888877


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.... ....+..+++++.++|.+||+.||++||++.++++.|+..
T Consensus       253 ~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          253 VMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHcCC-cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            76543 4456788999999999999999999999999999998874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.5e-40  Score=339.66  Aligned_cols=257  Identities=19%  Similarity=0.269  Sum_probs=200.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||++.......  .+ .++..++..+.+|+++..+..++...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~~-~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKHP--QL-HIESKIYKMMQGGVGIPTIRWCGAEGD   78 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEEESCSSCC--HH-HHHHHHHHHHTTSTTCCCEEEEEEETT
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCC------cEEEEEEecCCcchh--HH-HHHHHHHHHhhcCCCCCccccccCCCC
Confidence            478999999999999999999976554      589999987654322  12 222323344444445666666667788


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla~~  196 (620)
                      ..|+||||+.++|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.
T Consensus        79 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A           79 YNVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ceEEEEEecCCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            9999999998888888764 45679999999999999999999999999999999999999   5889999999999987


Q ss_pred             ccCCCCCC----CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhcc
Q 007046          197 LLGIPLPS----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQ  269 (620)
Q Consensus       197 ~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---~~ei~~~i~~~~  269 (620)
                      ........    .......||+.|+|||.+.+.   .++.++|||||||++|+|++|+.||.+..   ..+.+..+....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (296)
T 3uzp_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  234 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCChhhhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence            65432111    123456899999999998754   68899999999999999999999998643   223333333222


Q ss_pred             CCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          270 EIP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       270 ~~~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...   ..+..+|+++.+++.+||+.||++||++.++++.|..
T Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence            111   2346789999999999999999999999999987766

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.9e-41  Score=348.93  Aligned_cols=254  Identities=17%  Similarity=0.247  Sum_probs=204.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHH-HHHHccCCCceeEeEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLND-LFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~-~~l~~~~h~nIv~l~g~~~  116 (620)
                      .++|++.+.||+|+||.||+|.+...     .++.||+|+++......  ...+..+... ..+...+||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~   84 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKN-----GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   84 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT-----TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCC-----CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeee
Confidence            47899999999999999999997532     23589999987533211  1111122111 1223348999999999987


Q ss_pred             -----ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          117 -----INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       117 -----~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                           .....++||||++|+|.+.+.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           85 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             ecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecC
Confidence                 456799999999999999887655567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....    ........||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.+.+..+.+..+......
T Consensus       165 g~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  237 (326)
T 1blx_A          165 GLARIYSF----QMALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  237 (326)
T ss_dssp             CSCCCCCG----GGGGCCCCCCCTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccccC----CCCccccccccceeCHHHHhcC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCC
Confidence            99976532    1123446799999999998643   6889999999999999999999999998887777766542211


Q ss_pred             C-------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 P-------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~-------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +                         .+...+++++.+||.+||+.||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1                         133568999999999999999999999999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=9.6e-41  Score=357.85  Aligned_cols=248  Identities=19%  Similarity=0.288  Sum_probs=202.0

Q ss_pred             CeeE--EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           42 ALKL--RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        42 ~y~i--~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .|++  .+.||+|+||.||+|.+..++      +.||+|+++.........+..+.  .+++.++||||+++++++...+
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g------~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~hpnIv~~~~~~~~~~  159 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATG------LKLAAKIIKTRGMKDKEEVKNEI--SVMNQLDHANLIQLYDAFESKN  159 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTC------CEEEEEEEECCSHHHHHHHHHHH--HHHTTCCCTTBCCEEEEEECSS
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCC------cEEEEEEEcccccccHHHHHHHH--HHHHhCCCCCCCeEEEEEEECC
Confidence            3555  678999999999999986655      48999999876654444444333  3566779999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE--ccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl--d~~~~vkL~DFGla~~  196 (620)
                      .+||||||++ |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||+  +.++.+||+|||+++.
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence            9999999998 567777654 44579999999999999999999999999999999999999  5667899999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--C
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--I  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--~  274 (620)
                      +..    .......+||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.+..+.+..+........  .
T Consensus       239 ~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  311 (373)
T 2x4f_A          239 YKP----REKLKVNFGTPEFLAPEVVNYD---FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE  311 (373)
T ss_dssp             CCT----TCBCCCCCSSCTTCCHHHHTTC---BCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGG
T ss_pred             cCC----ccccccccCCCcEeChhhccCC---CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhh
Confidence            643    1223445799999999998643   688999999999999999999999999998888888876543322  2


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+++++.+||.+||+.||++||++.++++
T Consensus       312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          312 FQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            3578999999999999999999999999998

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-40  Score=344.60  Aligned_cols=257  Identities=19%  Similarity=0.332  Sum_probs=204.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ...++|++.+.||+|+||.||+|++..++      +.||||++....... ..+. ++...+.++.+|+||+++++++..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~-~~~~-~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTG------QLAAIKVMDVTGDEE-EEIK-QEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSSTT-HHHH-HHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCC------CeEEEEEEecCcccH-HHHH-HHHHHHHhccCCCCeeeeeeEEee
Confidence            34678999999999999999999986655      489999997654332 2222 233344555589999999999987


Q ss_pred             ------CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          118 ------NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       118 ------~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                            .+.+|+||||++| +|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEee
Confidence                  5689999999985 788887765557899999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      ||++......   ........||+.|+|||++....  ...++.++|+|||||++|+|++|..||.+.+.......+...
T Consensus       173 fg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  249 (326)
T 2x7f_A          173 FGVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN  249 (326)
T ss_dssp             CTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             CcCceecCcC---ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC
Confidence            9998765321   11233457999999999986321  346888999999999999999999999988887777666655


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......+..+++++.++|.+||..||.+||++.++++
T Consensus       250 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            5444456788999999999999999999999999998

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.4e-40  Score=339.38  Aligned_cols=250  Identities=20%  Similarity=0.283  Sum_probs=208.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++.....  ........++. .+++.++|+||+++++++.
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~   85 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFFE   85 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCSHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCC------ceEEEEEechhhccCHHHHHHHHHHH-HHHHhCCCCCEeeeeeeec
Confidence            3568999999999999999999986655      4799999875432  12222222222 3566779999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++..|+||||++ +++.+.+.  ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  163 (294)
T 2rku_A           86 DNDFVFVVLELCRRRSLLELHK--RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  163 (294)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCce
Confidence            9999999999999 46666554  34579999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      .....   ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||......+.+..+...  ...++
T Consensus       164 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~  235 (294)
T 2rku_A          164 KVEYD---GERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIP  235 (294)
T ss_dssp             ECCST---TCCBCCCCSCCSSCCHHHHTTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCC
T ss_pred             ecccC---ccccccccCCCCcCCcchhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cCCCc
Confidence            76321   1223345799999999998643   5788999999999999999999999998888777766543  34567


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+++++.++|.+||+.||++||++.++++
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          236 KHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            889999999999999999999999999998

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.5e-40  Score=343.97  Aligned_cols=248  Identities=21%  Similarity=0.321  Sum_probs=206.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||+|+++.........+.++.  .+++.++||||+++++++...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEI--AVLKKIKHENIVTLEDIYESTT   79 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEECC------HHHHHH--HHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccceeeeeccCCCCceEEEEEECCCC------CEEEEEEEecccccchHHHHHHH--HHHHhCCCCCeeehhhhcccCC
Confidence            357999999999999999999986655      48999999865433333333332  2456678999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCcc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPH  195 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla~  195 (620)
                      ..|+||||++ |+|.+.+..  .+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             EEEEEEEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            9999999998 577777753  3578999999999999999999999999999999999999   778999999999987


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--C
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--P  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--~  273 (620)
                      ...     ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..++...+.......  .
T Consensus       158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  229 (304)
T 2jam_A          158 MEQ-----NGIMSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP  229 (304)
T ss_dssp             CCC-----CBTTHHHHSCCCBCCTTTBSSC---SCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTT
T ss_pred             ecC-----CCccccccCCCCccChHHhccC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            542     1223345799999999998643   68899999999999999999999999999888888887665332  3


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+++++.++|.+||..||++||++.++++
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          230 FWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            44678999999999999999999999999997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=7.5e-41  Score=356.18  Aligned_cols=254  Identities=19%  Similarity=0.216  Sum_probs=206.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.............++. .++..++||||+++++++... 
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~   98 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNK------VRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENIIGINDIIRAPT   98 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCTTCHHHHHHHHHHH-HHHHHCCCTTBCCCCEEECCSS
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCC------eEEEEEEeccccCcHHHHHHHHHH-HHHHhcCCCCCccceeEEecCC
Confidence            368999999999999999999976654      589999998654433323333333 345667899999999998764 


Q ss_pred             ----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 ----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                          ...|+||||++|+|.+.+..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~~~~~iv~e~~~~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A           99 IEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             TTTCCCEEEEEECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ccccceEEEEEcccCcCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence                36899999999988887753   57999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-  273 (620)
                      +...............+||+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+.+..+......+. 
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  253 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTB--CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCC--CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            8764332223334556899999999987532  2588999999999999999999999998887766666543211111 


Q ss_pred             ----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                  ....+++++.+||.+||+.||++||++.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                        12467899999999999999999999999997

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=7.2e-41  Score=342.74  Aligned_cols=253  Identities=17%  Similarity=0.238  Sum_probs=209.9

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEe
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      +...+..++|++.+.||+|+||.||+|.+..++      ..||||++........  ...+.++. .+++.++|+||+++
T Consensus         7 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~   79 (284)
T 2vgo_A            7 PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNK------FIMALKVLFKSQLEKEGVEHQLRREI-EIQSHLRHPNILRM   79 (284)
T ss_dssp             ---CCCGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHHHHHHH-HHHHTCCCTTBCCE
T ss_pred             CccchhhhhceeeheecCCCCeEEEEEEEcCCC------cEEEEEEEcccccchHHHHHHHHHHH-HHHhcCCCCCEeeE
Confidence            345577789999999999999999999976554      4899999965332111  11222222 35667789999999


Q ss_pred             EEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+..|+||||++| +|.+.+..  ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~D  157 (284)
T 2vgo_A           80 YNYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIAD  157 (284)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECC
T ss_pred             EEEEEcCCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEec
Confidence            9999999999999999985 77777754  35799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||++.....     .......||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+...  
T Consensus       158 fg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--  227 (284)
T 2vgo_A          158 FGWSVHAPS-----LRRRTMCGTLDYLPPEMIEGK---THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--  227 (284)
T ss_dssp             CTTCEECSS-----SCBCCCCSCGGGCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--
T ss_pred             ccccccCcc-----cccccccCCCCcCCHHHhccC---CCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--
Confidence            999876532     222345799999999998743   5788999999999999999999999998888877777543  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...++..++.++.++|.+||+.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            34567889999999999999999999999999997

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=7.4e-41  Score=371.25  Aligned_cols=247  Identities=22%  Similarity=0.341  Sum_probs=203.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.++||+|+||.||+|++..++      ..||||+++.....  ....+.++.  .+++.++||||+++++++...
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~~~~~  108 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTH------VERAIKIIRKTSVSTSSNSKLLEEV--AVLKLLDHPNIMKLYDFFEDK  108 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTC------CEEEEEEEEC-----CTTHHHHHHH--HHHTTCCCTTBCCEEEEEECS
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCC------cEEEEEEEeccccCchHHHHHHHHH--HHHHhCCCCCCCeEEEEEEeC
Confidence            36999999999999999999987665      47999999764321  122233322  356778999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEEeccCCc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL~DFGla  194 (620)
                      +.+|||||||+ |+|.+.+..  ...+++..+..++.||+.||.|||++||+||||||+|||++.+   +.+||+|||++
T Consensus       109 ~~~~lv~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          109 RNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             SEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            99999999998 577777753  3679999999999999999999999999999999999999764   45999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      +....    .......+||+.|+|||++.    +.++.++|||||||++|+|++|..||.+.+..+++..+.........
T Consensus       187 ~~~~~----~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  258 (494)
T 3lij_A          187 AVFEN----QKKMKERLGTAYYIAPEVLR----KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS  258 (494)
T ss_dssp             EECBT----TBCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS
T ss_pred             eECCC----CccccccCCCcCeeCHHHHc----ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence            87643    22334568999999999985    35889999999999999999999999999999999888776554433


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 P--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +  ..+++++.+||.+||+.||.+|||+.++++
T Consensus       259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            3  578999999999999999999999999997

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.2e-40  Score=341.51  Aligned_cols=257  Identities=19%  Similarity=0.272  Sum_probs=197.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||++.......  . ...+..++..+.+|+++..+..++...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~--~-~~~e~~~l~~l~~~~~i~~~~~~~~~~~   78 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKHP--Q-LHIESKIYKMMQGGVGIPTIRWCGAEGD   78 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEC---CC--C-HHHHHHHHHHHTTSTTCCCEEEEEEETT
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCC------ceEEEEeecccccch--H-HHHHHHHHHHhcCCCCCCeeeeecCCCC
Confidence            368999999999999999999976655      489999876543221  1 1222223444444555666666667888


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla~~  196 (620)
                      ..|+||||+.|+|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++.
T Consensus        79 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~  157 (296)
T 4hgt_A           79 YNVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             ceEEEEEccCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence            9999999998888888764 45679999999999999999999999999999999999999   7889999999999987


Q ss_pred             ccCCCCCC----CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcc
Q 007046          197 LLGIPLPS----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQ  269 (620)
Q Consensus       197 ~~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~---ei~~~i~~~~  269 (620)
                      ........    .......||+.|+|||.+.+.   .++.++|||||||++|+|++|+.||.+.+..   +.+..+....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (296)
T 4hgt_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  234 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred             ccCcccCccCCCCcccccCCCccccchHHhcCC---CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc
Confidence            65432211    223456899999999999754   6889999999999999999999999864322   2233332222


Q ss_pred             CCC---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          270 EIP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       270 ~~~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...   .....+|+++.++|.+||+.||++||++.++++.|..
T Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence            111   1336789999999999999999999999999987765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.8e-40  Score=355.97  Aligned_cols=250  Identities=20%  Similarity=0.254  Sum_probs=203.6

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ...++|++.+.||+|+||.||+|++..++      +.||||++........     ++. .+++.++|+||+++++++..
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~------~~vAiK~~~~~~~~~~-----~E~-~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESG------KRFALKKVLQDPRYKN-----REL-DIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTC------CEEEEEEEECCTTSCC-----HHH-HHHTTCCCTTBCCEEEEEEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCC------CEEEEEEEecCcchHH-----HHH-HHHHHcCCCCccchhheeee
Confidence            44678999999999999999999987665      4899999875533221     122 35677799999999999854


Q ss_pred             --------------------------------------CCEEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHH
Q 007046          118 --------------------------------------NGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLA  157 (620)
Q Consensus       118 --------------------------------------~~~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa  157 (620)
                                                            +..+|+||||++|+|.+.+...  ....+++..+..++.||+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  151 (383)
T 3eb0_A           72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF  151 (383)
T ss_dssp             C-------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             cCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence                                                  3458999999999887776542  457899999999999999


Q ss_pred             HHHHHHHHCCCeeecccCCcEEEc-cCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhH
Q 007046          158 QGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS  236 (620)
Q Consensus       158 ~gL~yLHs~gIiHrDLKP~NILld-~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDV  236 (620)
                      .||+|||++||+||||||+|||++ .++.+||+|||+++.+..    ........||+.|+|||.+.+.  ..++.++||
T Consensus       152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  225 (383)
T 3eb0_A          152 RAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP----SEPSVAYICSRFYRAPELMLGA--TEYTPSIDL  225 (383)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT----TSCCCCCCCCSSCCCHHHHTTC--SSCCTHHHH
T ss_pred             HHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC----CCCCcCcccCCCccCHHHhcCC--CCCCcchhh
Confidence            999999999999999999999998 688999999999987643    2233456789999999998643  248899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC---------------------------CCCCCCCHHHHHHHHHh
Q 007046          237 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------------------------PIPSGLPPAVENVLLGC  289 (620)
Q Consensus       237 wSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~---------------------------~~p~~~s~~l~~Li~~c  289 (620)
                      |||||++|||++|+.||.+.+..+.+..+......+                           .++..+++++.+||.+|
T Consensus       226 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (383)
T 3eb0_A          226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI  305 (383)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence            999999999999999999988877776665422111                           14566899999999999


Q ss_pred             hhcCcCCCCCHHHHHH
Q 007046          290 FEYDLRSRPLMTDILR  305 (620)
Q Consensus       290 L~~dP~~RPs~~eil~  305 (620)
                      |..||++|||+.|+++
T Consensus       306 L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          306 LRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCSSGGGSCCHHHHHT
T ss_pred             ccCChhhCCCHHHHhc
Confidence            9999999999999997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.6e-41  Score=370.73  Aligned_cols=248  Identities=21%  Similarity=0.334  Sum_probs=206.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||+++....  .....+..+.  .+++.++||||+++++++..
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~~~~   92 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQ------QEYAVKVINKASAKNKDTSTILREV--ELLKKLDHPNIMKLFEILED   92 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTC------CEEEEEEEEHHHHBCSCHHHHHHHH--HHHHHCCCTTBCCEEEEEEC
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCC------CEEEEEEEecccccchHHHHHHHHH--HHHHhCCCCCcCeEEEEEEc
Confidence            367999999999999999999987665      4899999964321  1222333332  25566799999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc---cCCcEEEeccCC
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGI  193 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld---~~~~vkL~DFGl  193 (620)
                      .+.+|+|||||. |+|.+.+..  ...+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  170 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL  170 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence            999999999998 577777754  36799999999999999999999999999999999999995   456799999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++.+..    .......+||+.|+|||++.+    .++.++|||||||++|+|++|.+||.+.+..+++..+........
T Consensus       171 a~~~~~----~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  242 (486)
T 3mwu_A          171 STCFQQ----NTKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD  242 (486)
T ss_dssp             TTTBCC----C----CCTTGGGGCCGGGGGS----CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC
T ss_pred             CeECCC----CCccCCCcCCCCCCCHHHhCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            987643    223345689999999999863    489999999999999999999999999999999988877665443


Q ss_pred             CC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+  ..+++++++||.+||..||++||++.++++
T Consensus       243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            33  568999999999999999999999999998

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.5e-41  Score=342.81  Aligned_cols=249  Identities=20%  Similarity=0.281  Sum_probs=181.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||++.......   ...+..+.  .+++.++||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~   81 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTG------LEVAIKMIDKKAMYKAGMVQRVQNEV--KIHCQLKHPSILELYNYFE   81 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHTTBCCTTBCCEEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCC------ceEEEEEeehhhhhhhhHHHHHHHHH--HHHHhCCCCCeEeEEEEEc
Confidence            367999999999999999999976554      489999996533211   12222222  3566779999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..|+||||+++ +|.+.+. ....++++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||++.
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~  160 (278)
T 3cok_A           82 DSNYVYLVLEMCHNGEMNRYLK-NRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT  160 (278)
T ss_dssp             CSSEEEEEEECCTTEEHHHHHH-TCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeEEEEEecCCCCcHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeeccee
Confidence            99999999999985 5555554 345789999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      .....   ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+..  .....+
T Consensus       161 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~  232 (278)
T 3cok_A          161 QLKMP---HEKHYTLCGTPNYISPEIATRS---AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL--ADYEMP  232 (278)
T ss_dssp             ECC----------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS--SCCCCC
T ss_pred             eccCC---CCcceeccCCCCcCCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh--cccCCc
Confidence            76321   1222345799999999998643   578899999999999999999999987766555444322  223467


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..++.++.++|.+||+.||++||++.++++
T Consensus       233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            789999999999999999999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.6e-40  Score=339.61  Aligned_cols=251  Identities=22%  Similarity=0.291  Sum_probs=203.6

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+...|++.+.||+|+||.||+|.+..++      ..||+|++....... ....+.++. .+++.++||||+++++++
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~------~~va~k~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~   94 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEA-EMLKGLQHPNIVRFYDSW   94 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEE
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCc------eEEEEEEecchhhCHHHHHHHHHHH-HHHHhCCCCCeeeeeeee
Confidence            345567999999999999999999987665      479999997644322 222222222 356777999999999998


Q ss_pred             EE----CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEc-cCCcEE
Q 007046          116 VI----NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILN-EADRAV  187 (620)
Q Consensus       116 ~~----~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld-~~~~vk  187 (620)
                      ..    ...+|+||||++| +|.+.+..  ...+++..++.++.||+.||.|||+.+  |+||||||+|||++ .++.+|
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~k  172 (290)
T 1t4h_A           95 ESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVK  172 (290)
T ss_dssp             EEESSSCEEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEE
T ss_pred             ccccCCCceEEEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEE
Confidence            76    4569999999985 77777653  367899999999999999999999999  99999999999998 789999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHH
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVV  266 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-~~~ei~~~i~  266 (620)
                      |+|||++....     ........||+.|+|||.+.+    .++.++|+||||+++|+|++|..||... +...+...+.
T Consensus       173 l~Dfg~~~~~~-----~~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  243 (290)
T 1t4h_A          173 IGDLGLATLKR-----ASFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT  243 (290)
T ss_dssp             ECCTTGGGGCC-----TTSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred             EeeCCCccccc-----ccccccccCCcCcCCHHHHhc----cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh
Confidence            99999997542     223344579999999998853    4889999999999999999999999874 4455555555


Q ss_pred             hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       267 ~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ........+...++++.++|.+||+.||++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          244 SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            444445566778899999999999999999999999997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=355.77  Aligned_cols=249  Identities=21%  Similarity=0.255  Sum_probs=198.0

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      -.++|++.+.||+|+||.||+|.+..++      +.||||++....... ......++. .+++.++|+||+++++++..
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~   95 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTG------AKVAIKKLYRPFQSELFAKRAYREL-RLLKHMRHENVIGLLDVFTP   95 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTC------CEEEEEECSSTTSSHHHHHHHHHHH-HHHHHCCBTTBCCCSEEECS
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCC------CEEEEEEeCccccCHHHHHHHHHHH-HHHHhCCCcCCCCceeeEec
Confidence            3578999999999999999999987665      489999996543322 122222222 35666789999999999876


Q ss_pred             C------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          118 N------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       118 ~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .      ..+|+||||+.++|.+.+..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  172 (367)
T 1cm8_A           96 DETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF  172 (367)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             CCccccCceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEee
Confidence            5      34699999997777777653   57999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....      ......||+.|+|||++.+.  ..++.++|+|||||++|||++|+.||.+.+..+.+..+......
T Consensus       173 g~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~  244 (367)
T 1cm8_A          173 GLARQADS------EMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT  244 (367)
T ss_dssp             TTCEECCS------SCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             eccccccc------ccCcCcCCCCcCCHHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99987532      34456899999999998642  36889999999999999999999999998877776666542221


Q ss_pred             C-----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 P-----------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~-----------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +                             .+...+++++.+||.+||..||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            1                             123567999999999999999999999999998

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.9e-40  Score=337.68  Aligned_cols=245  Identities=15%  Similarity=0.194  Sum_probs=198.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||||+++.....  ....... +...+..+.+||||+++++++..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~-e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDG------CIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCCTTSHHHHHHHH-HHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCC------ceEEEEEecccccccHHHHHHHH-HHHHHHHhCCCCCeeeeeeeeecC
Confidence            57999999999999999999987655      48999999864332  2222333 233345555999999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC------------
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA------------  183 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~------------  183 (620)
                      +..|+||||++| +|.+.+....  ...+++..++.++.||+.||+|||+++|+||||||+|||++.+            
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999985 8887776532  2679999999999999999999999999999999999999844            


Q ss_pred             -------CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 007046          184 -------DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR  256 (620)
Q Consensus       184 -------~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~  256 (620)
                             ..+||+|||++.....       .....||+.|+|||.+.+.  ..++.++|||||||++|+|++|.+|+...
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~  234 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISS-------PQVEEGDSRFLANEVLQEN--YTHLPKADIFALALTVVCAAGAEPLPRNG  234 (289)
T ss_dssp             ------CCCEEECCCTTCEETTC-------SCCCCCCGGGCCHHHHTTC--CTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred             ccccCCceEEEEcccccccccCC-------ccccCCCccccChhHhcCC--CCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence                   4799999999987632       1234699999999998643  24667999999999999999999877544


Q ss_pred             CHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .   ....+. ....+.++..+++++.++|.+||+.||++||++.++++
T Consensus       235 ~---~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          235 D---QWHEIR-QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             H---HHHHHH-TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             h---HHHHHH-cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            3   233333 33456678899999999999999999999999999987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.4e-40  Score=347.19  Aligned_cols=250  Identities=20%  Similarity=0.281  Sum_probs=208.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++.....  ......+.++. .+++.++|+||+++++++.
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~  111 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTK------EVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGFHGFFE  111 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCSHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEechhhhcCHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEe
Confidence            4578999999999999999999987655      4899999975432  12222222222 3567779999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..|+||||++| +|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          112 DNDFVFVVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeEEEEEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            99999999999994 66666543  4679999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  275 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p  275 (620)
                      .....   ........||+.|+|||++.+.   .++.++|+||||+++|+|++|..||......+.+..+...  ...++
T Consensus       190 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~  261 (335)
T 2owb_A          190 KVEYD---GERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIP  261 (335)
T ss_dssp             ECCST---TCCBCCCCSCCSSCCHHHHHTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCC
T ss_pred             ecccC---cccccccCCCccccCHHHhccC---CCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCC
Confidence            76421   1223445799999999998644   5788999999999999999999999998888877766554  34467


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+++++.+||.+||+.||++||++.++++
T Consensus       262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          262 KHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            889999999999999999999999999997

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=353.18  Aligned_cols=247  Identities=18%  Similarity=0.268  Sum_probs=191.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||+++.....  ..+ .++. .+++.++|+||+++++++...+
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~--~~~-~~E~-~~l~~l~h~niv~~~~~~~~~~  121 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQ------KPYALKVLKKTVDK--KIV-RTEI-GVLLRLSHPNIIKLKEIFETPT  121 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEC-------------C-HHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCC------cEEEEEEeccchhH--HHH-HHHH-HHHHhCCCCCCcceeeeEecCC
Confidence            356999999999999999999987655      47999999764321  222 2222 2456678999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEeccCCcc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPH  195 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~DFGla~  195 (620)
                      ..|+||||++ |+|.+.+.  ..+.+++..+..++.||+.||.|||+++|+||||||+|||++.   ++.+||+|||+++
T Consensus       122 ~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             eEEEEEEeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            9999999998 57777765  4567999999999999999999999999999999999999975   8899999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCC--
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEIP--  272 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e-i~~~i~~~~~~~--  272 (620)
                      ....    ........||+.|+|||++.+.   .++.++|||||||++|||++|..||......+ ++..+.......  
T Consensus       200 ~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~  272 (349)
T 2w4o_A          200 IVEH----QVLMKTVCGTPGYCAPEILRGC---AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFIS  272 (349)
T ss_dssp             -----------------CGGGSCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCT
T ss_pred             ccCc----ccccccccCCCCccCHHHhcCC---CCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCC
Confidence            6632    1223456799999999998643   68899999999999999999999998765544 566665544322  


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +....++.++.+||.+||..||++||++.++++
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            234678999999999999999999999999998

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.4e-41  Score=351.38  Aligned_cols=257  Identities=19%  Similarity=0.281  Sum_probs=202.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc-----hhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-----EDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~-----~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      .++|++.+.||+|+||.||+|.+..++      ..||+|++....     ......+..+.  .+++.++||||++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~   96 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTR------AIRAIKIMNKNKIRQINPKDVERIKTEV--RLMKKLHHPNIARLYEV   96 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHC---CHHHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCC------ceEEEeehhhhhhcccCHHHHHHHHHHH--HHHHhCCCCCcceeehh
Confidence            467999999999999999999986665      489999986532     12222333332  24566689999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhc--------------------------------------CCCCCHHHHHHHHHH
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLK--------------------------------------GGKLSLSNVFRYAID  155 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~--------------------------------------~~~l~~~~~~~i~~q  155 (620)
                      +...+..||||||++ |+|.+.+....                                      ...+++..+..++.|
T Consensus        97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  176 (345)
T 3hko_A           97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ  176 (345)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred             hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence            999999999999998 56666553100                                      112357788899999


Q ss_pred             HHHHHHHHHHCCCeeecccCCcEEEccCC--cEEEeccCCcccccCCCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCc
Q 007046          156 LAQGILQLHSKGILVLNLKPFNFILNEAD--RAVLGDVGIPHLLLGIPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISF  232 (620)
Q Consensus       156 Ia~gL~yLHs~gIiHrDLKP~NILld~~~--~vkL~DFGla~~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~  232 (620)
                      |+.||+|||+++|+||||||+|||++.++  .+||+|||+++.+..... .........||+.|+|||.+.+. ...++.
T Consensus       177 i~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~  255 (345)
T 3hko_A          177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT-NESYGP  255 (345)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS-SSCCCT
T ss_pred             HHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC-CCCCCc
Confidence            99999999999999999999999998776  899999999987643221 11123456799999999998642 346889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          233 ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       233 ~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++|||||||++|+|++|..||.+.+..+....+.........+  ..+++++.+||.+||+.||.+||++.++++
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            9999999999999999999999999888888887665443333  348999999999999999999999999998

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.4e-40  Score=343.61  Aligned_cols=266  Identities=18%  Similarity=0.273  Sum_probs=205.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...++.++|++.+.||+|+||.||+|.+....   ..+..||+|+++.....  ....+..+.  .+++.++||||++++
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~  102 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQED---GTSLKVAVKTMKLDNSSQREIEEFLSEA--ACMKDFSHPNVIRLL  102 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTT---SCEEEEEEEEC---CCCHHHHHHHHHHH--HHHHTCCCTTBCCCC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccC---CceeEEEEEEEeccccchhHHHHHHHHH--HHHhcCCCCCeeeee
Confidence            45578899999999999999999999876543   23568999999765432  222233322  356777899999999


Q ss_pred             EEEEECC-----EEEEEEecCCC-ChHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc
Q 007046          113 GISVING-----KICIIMKFYEG-SVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE  182 (620)
Q Consensus       113 g~~~~~~-----~~~IVmE~~~G-sLld~l~~~----~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~  182 (620)
                      +++...+     ..|+||||+++ +|.+.+...    ....+++..++.++.||+.||.|||+++|+||||||+|||++.
T Consensus       103 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~  182 (313)
T 3brb_A          103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECT
T ss_pred             EEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence            9988654     35999999994 776666432    3367999999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 007046          183 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  261 (620)
Q Consensus       183 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei  261 (620)
                      ++.+||+|||+++....... ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+....++
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  258 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDY-YRQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM  258 (313)
T ss_dssp             TSCEEECSCSCC-----------------CCGGGSCHHHHHSS---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             CCcEEEeecCcceecccccc-cCcccccCCCccccCchhhcCC---CccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence            99999999999987643211 1122334678899999998643   68899999999999999999 9999999888888


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+.... .+..+..+++++.++|.+||..||++||++.++++.|...
T Consensus       259 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          259 YDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             HHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            77776543 4556788999999999999999999999999999987653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.1e-40  Score=349.91  Aligned_cols=255  Identities=20%  Similarity=0.267  Sum_probs=202.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      -..++|++.+.||+|+||.||+|++..++      +.||||++........ .....++. .+++.++|+||+++++++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~   94 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTG------RIVAIKKFLESDDDKMVKKIAMREI-KLLKQLRHENLVNLLEVCK   94 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTC------CEEEEEEEESCSSCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCC------ceEEEEEEecCCCchHHHHHHHHHH-HHHhhCCCCCEeeEEEEee
Confidence            45689999999999999999999987655      4899999876544332 22222222 3566678999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..+..|+||||++|++++.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        95 ~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           95 KKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFART  173 (331)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             cCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence            9999999999999877777654 456799999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-----
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-----  271 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-----  271 (620)
                      ....   ........||+.|+|||.+.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+......     
T Consensus       174 ~~~~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  248 (331)
T 4aaa_A          174 LAAP---GEVYDDEVATRWYRAPELLVGD--VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH  248 (331)
T ss_dssp             -------------CCCCCTTCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             ecCC---ccccCCCcCCccccCcccccCC--CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhh
Confidence            5331   2233455799999999998642  25788999999999999999999999988877665554422110     


Q ss_pred             ---------------CC---------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ---------------PP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ---------------~~---------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                     +.         ....+++++.+||.+||+.||++||++.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                           00         11367899999999999999999999999997

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-40  Score=343.98  Aligned_cols=263  Identities=20%  Similarity=0.312  Sum_probs=200.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..-...++|++.+.||+|+||.||+|++..++      +.||||+++......  ....+.++. .+++.++||||++++
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~l~hp~iv~~~  100 (309)
T 2h34_A           28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRE------RIVALKLMSETLSSDPVFRTRMQREA-RTAGRLQEPHVVPIH  100 (309)
T ss_dssp             ------CCEEEEEEEEECSSSEEEEEEETTTT------EEEEEEECGGGGGGSHHHHHHHHHHH-HHHTTCCCTTBCCEE
T ss_pred             CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCC------eEEEEEecCcccccCHHHHHHHHHHH-HHHhhcCCCCeeEEE
Confidence            34455689999999999999999999976554      589999997654322  122222222 356677999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++..++..|+||||++| +|.+.+..  ..++++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus       101 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Df  178 (309)
T 2h34_A          101 DFGEIDGQLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDF  178 (309)
T ss_dssp             EEEEETTEEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred             EEEeeCCeEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecC
Confidence            999999999999999996 77776653  357999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++......  ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+...+...+......
T Consensus       179 g~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  253 (309)
T 2h34_A          179 GIASATTDEK--LTQLGNTVGTLYYMAPERFSES---HATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR  253 (309)
T ss_dssp             CC------------------CCGGGCCGGGTCC-------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC
T ss_pred             ccCccccccc--cccccccCCCcCccCHHHHcCC---CCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC
Confidence            9987664321  1223345799999999998643   6788999999999999999999999987766554444332221


Q ss_pred             -CCCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHhCC
Q 007046          272 -PPIPSGLPPAVENVLLGCFEYDLRSRP-LMTDILRVFKSDG  311 (620)
Q Consensus       272 -~~~p~~~s~~l~~Li~~cL~~dP~~RP-s~~eil~~L~~~~  311 (620)
                       ...+..+|+++.++|.+||+.||++|| +++++++.|....
T Consensus       254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence             235678999999999999999999999 9999999888754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.3e-40  Score=345.84  Aligned_cols=249  Identities=20%  Similarity=0.293  Sum_probs=207.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH------HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR------MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~------~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||+|+++......      ...+..+.  .+++.++||||+++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~   82 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTG------LEYAAKFIKKRQSRASRRGVSREEIEREV--SILRQVLHHNVITLHD   82 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSSSCSSSBCHHHHHHHH--HHHHHCCCTTBCCEEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCC------eEEEEEEEecccccccccchhHHHHHHHH--HHHHhCCCCCcceEEE
Confidence            357999999999999999999987655      489999997643221      22233332  2456678999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEE
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVL  188 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL  188 (620)
                      ++...+..|+||||++ ++|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++    .+||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl  160 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEE
Confidence            9999999999999997 57777665  456789999999999999999999999999999999999999887    7999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++....    ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+..+....+...
T Consensus       161 ~Dfg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~  233 (321)
T 2a2a_A          161 IDFGLAHEIED----GVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV  233 (321)
T ss_dssp             CCCTTCEECCT----TCCCCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT
T ss_pred             ccCccceecCc----cccccccCCCCCccCcccccCC---CCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            99999987643    1223456799999999998643   6889999999999999999999999999888888777654


Q ss_pred             cCCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....  ..+..+++++.+||.+||..||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          234 SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            3322  123678999999999999999999999999998

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.9e-41  Score=355.01  Aligned_cols=263  Identities=15%  Similarity=0.174  Sum_probs=197.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH--HHHHHH-------HHHHHHccCCCce
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERL-------NDLFLKCQGVEGI  108 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~--~~~~~~-------~~~~l~~~~h~nI  108 (620)
                      +..++|++.+.||+|+||.||+|.+..++   ..+..||||++.........  ..+.+.       +...+..++|+||
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni  110 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKP---EKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGI  110 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSC---GGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCC---CccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCc
Confidence            55688999999999999999999987632   13457999999865432111  111111       1124566799999


Q ss_pred             eEeEEEEEE----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC
Q 007046          109 CWLQGISVI----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       109 v~l~g~~~~----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~  184 (620)
                      +++++++..    ....||||||+.++|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS
T ss_pred             ceeecccccccCCCcEEEEEEeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC
Confidence            999999988    788999999996677776653  33899999999999999999999999999999999999999887


Q ss_pred             --cEEEeccCCcccccCCCC----CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--
Q 007046          185 --RAVLGDVGIPHLLLGIPL----PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--  256 (620)
Q Consensus       185 --~vkL~DFGla~~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~--  256 (620)
                        .+||+|||+++.+.....    .........||+.|+|||++.+.   .++.++|||||||++|||++|..||.+.  
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~pf~~~~~  265 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV---ALSRRSDVEILGYCMLRWLCGKLPWEQNLK  265 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              999999999987643211    11112455799999999998744   6899999999999999999999999652  


Q ss_pred             CHHHHHHHHHhccCCCCCC---------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          257 SVDEIYDAVVRRQEIPPIP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       257 ~~~ei~~~i~~~~~~~~~p---------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +...........  ...++         ..+++++.++|.+||..||++||++.+|++.|+..
T Consensus       266 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          266 DPVAVQTAKTNL--LDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             CHHHHHHHHHHH--HHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             ccHHHHHHHHhh--cccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            322222211111  11122         27899999999999999999999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.5e-41  Score=349.43  Aligned_cols=262  Identities=19%  Similarity=0.206  Sum_probs=203.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.+.||+|+||.||+|.+..++      +.||||+++............++. .+++.++||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~   78 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTG------DLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLFAIEEE   78 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECGGGGGSCHHHHHHHH-HHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCC------cEEEEEEeccccccchHHHHHHHH-HHHHhcCCCCcceEEEEeec
Confidence            45678999999999999999999987655      489999997644322222222222 35566789999999999987


Q ss_pred             CC--EEEEEEecCC-CChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE----ccCCcEEEe
Q 007046          118 NG--KICIIMKFYE-GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLG  189 (620)
Q Consensus       118 ~~--~~~IVmE~~~-GsLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl----d~~~~vkL~  189 (620)
                      ..  ..||||||++ |+|.+.+..... ..+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEc
Confidence            55  7899999998 577777654322 349999999999999999999999999999999999999    777889999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-----VRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDE  260 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-----~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~----~~e  260 (620)
                      |||+++....    ........||+.|+|||++...     ....++.++|||||||++|||++|..||....    ..+
T Consensus       159 Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  234 (319)
T 4euu_A          159 DFGAARELED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE  234 (319)
T ss_dssp             CCTTCEECCT----TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHH
T ss_pred             cCCCceecCC----CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHH
Confidence            9999987643    2233446799999999987521     12468899999999999999999999996432    234


Q ss_pred             HHHHHHhccCCC-----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          261 IYDAVVRRQEIP-----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       261 i~~~i~~~~~~~-----------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +...+.......                       .++..+++.+.++|.+||+.||++||+++|+++.....
T Consensus       235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            455554432211                       12234567888999999999999999999999976654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=8e-40  Score=339.18  Aligned_cols=260  Identities=20%  Similarity=0.347  Sum_probs=197.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ...++|++.+.||+|+||.||+|.+..++      +.||||+++....  ......+.++. .+++.++|+||+++++++
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~  101 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDG------VPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIKYYASF  101 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTC------CEEEEEEECTTSSCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCC------ceEEEEeeehhhccCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEE
Confidence            34568999999999999999999976554      4899999975332  22222222222 356677999999999999


Q ss_pred             EECCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VINGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ...+..++||||++| +|.+.+...  ....+++..++.++.||+.||.|||+++++||||||+|||++.++.+||+|||
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg  181 (310)
T 2wqm_A          102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG  181 (310)
T ss_dssp             EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred             EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecc
Confidence            999999999999995 777766543  34678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--SVDEIYDAVVRRQE  270 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~--~~~ei~~~i~~~~~  270 (620)
                      +++.....   ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.  ...++...+.....
T Consensus       182 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  255 (310)
T 2wqm_A          182 LGRFFSSK---TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY  255 (310)
T ss_dssp             --------------------CCSSCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS
T ss_pred             ceeeecCC---CccccccCCCeeEeChHHhCCC---CCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC
Confidence            98866431   1222345799999999998643   6889999999999999999999999764  34455555554444


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+..+..+++++.++|.+||..||++||++.++++.|+..
T Consensus       256 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            4444477999999999999999999999999999987763

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=377.37  Aligned_cols=262  Identities=19%  Similarity=0.283  Sum_probs=209.4

Q ss_pred             CCcCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+..+++.+.+ +||+|+||.||+|.++..+    .+..||||+++..... ....+..+.  .+++.++|+||+++++
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~E~--~il~~l~hpniv~l~~  403 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRK----KQIDVAIKVLKQGTEKADTEEMMREA--QIMHQLDNPYIVRLIG  403 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECSS----CEEEEEEEECCCCCSSTTHHHHHHHH--HHHTTCCCTTBCCEEE
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecCC----CcEEEEEEEcCCCCChHHHHHHHHHH--HHHHhCCCCCEeeEEE
Confidence            346777888887 8999999999999876443    2357999999875433 233333333  3566779999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.. +.+||||||++| +|.+++. .....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       404 ~~~~-~~~~lv~E~~~~g~L~~~l~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFG  481 (613)
T 2ozo_A          404 VCQA-EALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG  481 (613)
T ss_dssp             EEES-SSEEEEEECCTTCBHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred             Eecc-CCeEEEEEeCCCCcHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeecc
Confidence            9875 569999999995 5655554 345679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++.+..............+|+.|||||++.+   +.++.++|||||||++|||++ |..||.+.+..++...+.... .
T Consensus       482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~  557 (613)
T 2ozo_A          482 LSKALGADDSYYTARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-R  557 (613)
T ss_dssp             TTTTCC--------------CCTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC-C
T ss_pred             CcccccCCCceeeeccCCCCccceeCHhhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-C
Confidence            99876432211122223456789999999864   368999999999999999998 999999999888888776554 4


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...|..+++++.+||.+||+.||++||++.+|++.|+.
T Consensus       558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            56788999999999999999999999999999987765

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=4.1e-40  Score=351.84  Aligned_cols=247  Identities=21%  Similarity=0.257  Sum_probs=192.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++.......  ...+..+.  .+++.++||||+++++++..
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~~~~   95 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILE------RNVAIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTP   95 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEECTTSSHHHHHHHHHHH--HHHHHCCCTTBCCEEEEECS
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCC------ceEEEEEeccccCChHHHHHHHHHH--HHHHhcCCCCccceEEeecc
Confidence            478999999999999999999976655      589999997643222  22222222  35667799999999999976


Q ss_pred             CC------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          118 NG------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       118 ~~------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .+      .+||||||++|++.+.+.    ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  171 (371)
T 2xrw_A           96 QKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF  171 (371)
T ss_dssp             CCSTTTCCEEEEEEECCSEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred             ccccccccceEEEEEcCCCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEe
Confidence            54      799999999998888774    35899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+++....    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus       172 g~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  244 (371)
T 2xrw_A          172 GLARTAGT----SFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  244 (371)
T ss_dssp             CC--------------------CTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCC
T ss_pred             eccccccc----ccccCCceecCCccCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            99986532    1223456899999999999753   6889999999999999999999999998887777766543221


Q ss_pred             CC--------------------C--------------CC------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PP--------------------I--------------PS------GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~--------------------~--------------p~------~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.                    .              |.      ..++++.+||.+||..||++|||++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            10                    0              00      11578999999999999999999999998

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.3e-40  Score=365.47  Aligned_cols=259  Identities=23%  Similarity=0.347  Sum_probs=211.2

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|..++|++.++||+|+||.||+|.+..+       ..||||+++..... ...+.++.  .+++.++||||++++++
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~vavK~~~~~~~~-~~~~~~E~--~~l~~l~hp~iv~~~~~  247 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQEA--QVMKKLRHEKLVQLYAV  247 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTT-------EEEEEEECCTTSSC-HHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECCC-------ceEEEEEeccCCCC-HHHHHHHH--HHHHhCCCCCEeeEEEE
Confidence            3458889999999999999999999997643       36999999865433 23333333  35666799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.. +..||||||++ |+|.+.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       248 ~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~  326 (452)
T 1fmk_A          248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  326 (452)
T ss_dssp             ECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred             EcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcc
Confidence            865 67899999998 5888887654456799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||.+.+   +.++.++||||||+++|||++ |..||.+....++...+... ...
T Consensus       327 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~  400 (452)
T 1fmk_A          327 ARLIEDNE--YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRM  400 (452)
T ss_dssp             TC----------------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCC
T ss_pred             ceecCCCc--eecccCCcccccccCHhHHhc---CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            98764321  112233457889999999864   368999999999999999999 99999999998888877654 345


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.|..+++++.+||.+||+.||++||++.++++.|+..
T Consensus       401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            56789999999999999999999999999999988875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-40  Score=338.99  Aligned_cols=260  Identities=18%  Similarity=0.263  Sum_probs=207.5

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .|++.+.||+|+||.||+|.+..+..   .+..||+|.++............++. .+++.++||||+++++++...+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQ---NRIQCAIKSLSRITEMQQVEAFLREG-LLMRGLNHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSS---CEEEEEEEEETTCCSHHHHHHHHHHH-HHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             EEccCceeccCCCceEEEEEEecCCC---ceeeeeeeeccccccHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEecCCCC
Confidence            46677999999999999999765442   34579999998655433333223332 356677999999999999766554


Q ss_pred             -EEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          122 -CIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       122 -~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                       ++||||+. |+|.+.+.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             cEEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence             99999997 566666643 457789999999999999999999999999999999999999999999999999986543


Q ss_pred             CCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCC
Q 007046          200 IPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSG  277 (620)
Q Consensus       200 ~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~  277 (620)
                      ... .........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |.+||...+..++...+... .....+..
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  252 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTY---RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG-RRLPQPEY  252 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT-CCCCCCTT
T ss_pred             CcccccccCcCCCCCccccChhhhccC---CCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC-CCCCCCcc
Confidence            221 12233445789999999999643   68899999999999999999 55667777777776666544 34556788


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +++++.+++.+||+.||.+||++.++++.|+..
T Consensus       253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999999977763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.9e-40  Score=339.67  Aligned_cols=248  Identities=21%  Similarity=0.330  Sum_probs=208.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|++.+.||+|+||.||+|++..++      +.||||+++..........+.++. .+++..+|+||+++++++..++.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~   94 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQ------KVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYVTKYYGSYLKDTK   94 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEETTTCSTTHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCC------cEEEEEEecccccHHHHHHHHHHH-HHHHhCCCCCEeEEEEEEecCCe
Confidence            56999999999999999999976655      489999997654332222223332 24566799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .|+||||++| +|.+.+   ..+++++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        95 ~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             EEEEEECCTTEEHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             EEEEEEeCCCCcHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            9999999996 555555   356899999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  279 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s  279 (620)
                      ..   .......||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+... ..+.++..++
T Consensus       172 ~~---~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  244 (303)
T 3a7i_A          172 TQ---IKRNTFVGTPFWMAPEVIKQS---AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN-NPPTLEGNYS  244 (303)
T ss_dssp             TB---CCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-CCCCCCSSCC
T ss_pred             cc---cccCccCCCcCccCHHHHhcC---CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC-CCCCCccccC
Confidence            21   223445799999999998643   6888999999999999999999999988887777666543 4456778899


Q ss_pred             HHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          280 PAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       280 ~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .++.+||.+||..||++||++.++++
T Consensus       245 ~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          245 KPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            99999999999999999999999997

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.3e-40  Score=366.96  Aligned_cols=253  Identities=21%  Similarity=0.311  Sum_probs=207.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH------------HHHHHHHHHHHHHHccCCCc
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR------------MRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~------------~~~~~~~~~~~~l~~~~h~n  107 (620)
                      .++|++.++||+|+||.||+|++..++      +.||||+++......            ......++. .+++.++|||
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpn  107 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGH------SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI-SLLKSLDHPN  107 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTC------CEEEEEEEEC----------------CTHHHHHHHH-HHHHTCCCTT
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCC------cEEEEEEEEhhhcccccccccchhhHHHHHHHHHHH-HHHHhCCCCC
Confidence            367999999999999999999987665      479999997643221            111222222 3566779999


Q ss_pred             eeEeEEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC--
Q 007046          108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD--  184 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~--  184 (620)
                      |+++++++.....+|||||||+| +|.+.+..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++  
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  185 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL  185 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCC
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCC
Confidence            99999999999999999999984 77777753  46799999999999999999999999999999999999998776  


Q ss_pred             -cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          185 -RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       185 -~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                       .+||+|||+++....    .......+||+.|+|||++.    +.++.++|||||||++|+|++|..||.+.+..+++.
T Consensus       186 ~~~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  257 (504)
T 3q5i_A          186 LNIKIVDFGLSSFFSK----DYKLRDRLGTAYYIAPEVLK----KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK  257 (504)
T ss_dssp             SSEEECCCTTCEECCT----TSCBCCCCSCTTTCCHHHHT----TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ccEEEEECCCCEEcCC----CCccccccCCcCCCCHHHhc----cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence             699999999987643    22334568999999999985    358899999999999999999999999999999999


Q ss_pred             HHHhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH--HHHh
Q 007046          264 AVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR--VFKS  309 (620)
Q Consensus       264 ~i~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~--~L~~  309 (620)
                      .+.........+  ..+++++.+||.+||..||.+||++.++++  ++..
T Consensus       258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence            887765443322  678999999999999999999999999997  4444

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=6.1e-41  Score=352.11  Aligned_cols=246  Identities=20%  Similarity=0.257  Sum_probs=179.7

Q ss_pred             CeeEE---eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLR---HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~---~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      +|++.   +.||+|+||.||+|.+..++      +.||||++......    ...++...+..+.+||||+++++++.++
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~----~~~~e~~~l~~l~~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSN------QAFAVKIISKRMEA----NTQKEITALKLCEGHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTC------CEEEEEEEEGGGHH----HHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCC------CEEEEEEEChhhhh----hHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            46665   78999999999999987665      48999999754322    2223333455555699999999999999


Q ss_pred             CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cEEEeccCCc
Q 007046          119 GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~vkL~DFGla  194 (620)
                      ...||||||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++   .+||+|||++
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a  156 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIK--KKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA  156 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred             CEEEEEEEccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccc
Confidence            999999999985 7777775  356899999999999999999999999999999999999998765   8999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHh
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------VDEIYDAVVR  267 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-------~~ei~~~i~~  267 (620)
                      +....   ........+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+       ..+++..+..
T Consensus       157 ~~~~~---~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~  230 (325)
T 3kn6_A          157 RLKPP---DNQPLKTPCFTLHYAAPELLNQN---GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK  230 (325)
T ss_dssp             EECCC-------------------------C---CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT
T ss_pred             eecCC---CCCcccccCCCcCccCHHHhcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc
Confidence            86532   12233456799999999998643   68999999999999999999999998643       3455665544


Q ss_pred             ccCCCCC--CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~~--p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .......  ...+++++.+||.+||..||++||++.++++
T Consensus       231 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          231 GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            3322111  1368999999999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.2e-40  Score=342.92  Aligned_cols=258  Identities=20%  Similarity=0.309  Sum_probs=197.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +-.++|++.+.||+|+||.||+|++.        ++.||||++.....   .....+.+......++||||+++++++..
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~   73 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSWQ--------GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMT   73 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEET--------TEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEEC--------CEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeecc
Confidence            44678999999999999999999862        35799999975432   22222222122333799999999998765


Q ss_pred             C----CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeecccCCcEEEccCC
Q 007046          118 N----GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--------SKGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       118 ~----~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH--------s~gIiHrDLKP~NILld~~~  184 (620)
                      .    ..+|+||||++| +|.+++   +...+++..++.++.||+.||+|||        +.+|+||||||+|||++.++
T Consensus        74 ~~~~~~~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~  150 (301)
T 3q4u_A           74 SRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG  150 (301)
T ss_dssp             EETTEEEEEEEECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred             ccCCCceeEEehhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence            2    468999999985 776666   4567999999999999999999999        99999999999999999999


Q ss_pred             cEEEeccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCC---CCCchhhHHHHHHHHHHHHhC----------C
Q 007046          185 RAVLGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRG---PISFETDSWGFACSIIEMLTG----------V  250 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~---~~s~~sDVwSlGvil~elltG----------~  250 (620)
                      .+||+|||+++........ ........||+.|+|||++.+....   .++.++|||||||++|||++|          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            9999999999876432211 1122345899999999998753211   344689999999999999999          8


Q ss_pred             CCCCCCC-----HHHHHHHHHhccCCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          251 QPRCGRS-----VDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       251 ~Pf~~~~-----~~ei~~~i~~~~~~~~~p~-----~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .||....     ...+...+......+.++.     .+++++.+|+.+||+.||++||++.++++.|++
T Consensus       231 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            8886532     2233333333333343332     356889999999999999999999999998875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.2e-40  Score=345.90  Aligned_cols=265  Identities=20%  Similarity=0.267  Sum_probs=207.5

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..++...|++.++||+|+||.||++.+....  ...++.||||+++..........+.++. .+++.++||||+++++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~  102 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTN--DGTGEMVAVKALKADAGPQHRSGWKQEI-DILRTLYHEHIIKYKGCC  102 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC----CCEEEEEEEECTTCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCC--CCCCcEEEEEEeccccChHHHHHHHHHH-HHHHhCCCcchhhEEEEE
Confidence            4455555699999999999999999765433  2456799999998765444333333333 355667899999999999


Q ss_pred             EE--CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          116 VI--NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       116 ~~--~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ..  ...+|+||||+++ +|.+.+.   ...+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  179 (318)
T 3lxp_A          103 EDAGAASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG  179 (318)
T ss_dssp             EETTTTEEEEEECCCTTCBHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred             ecCCCceEEEEEecccCCcHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcc
Confidence            88  4689999999985 6666653   3459999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------------
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-------------  259 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-------------  259 (620)
                      +++................||+.|+|||.+.+.   .++.++||||||+++|+|++|..||......             
T Consensus       180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~  256 (318)
T 3lxp_A          180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT  256 (318)
T ss_dssp             GCEECCTTCSEEEC---CCCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHH
T ss_pred             ccccccccccccccccCCCCCceeeChHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchh
Confidence            998764322211223445688999999998643   5788999999999999999999998653221             


Q ss_pred             -HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 -EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 -ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                       ...............+..+++++.+||.+||+.||++||++.++++.|+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  307 (318)
T 3lxp_A          257 VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT  307 (318)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence             11222333445566788999999999999999999999999999987765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.7e-40  Score=350.59  Aligned_cols=254  Identities=22%  Similarity=0.298  Sum_probs=205.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++      +.||+|+++............++. .+++.++|+||++++++
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~va~K~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~   99 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIREL-QVLHECNSPYIVGFYGA   99 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEECCCCHHHHHHHHHHH-GGGGGCCCTTBCCEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCC------cEEEEEEeccccCHHHHHHHHHHH-HHHHHCCCCCEEEEeEE
Confidence            45677889999999999999999999987655      489999998764443333333332 24566799999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +..++..||||||++| +|.+.+..  ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus       100 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  177 (360)
T 3eqc_A          100 FYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG  177 (360)
T ss_dssp             EEETTEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred             EEECCEEEEEEECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECC
Confidence            9999999999999985 77777653  35789999999999999999999996 99999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY----------  262 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~----------  262 (620)
                      +++....     .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||...+..++.          
T Consensus       178 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  249 (360)
T 3eqc_A          178 VSGQLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD  249 (360)
T ss_dssp             CCHHHHH-----HC----CCCCTTCCHHHHTTC---CCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------
T ss_pred             CCccccc-----ccccCCCCCCCeECHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccc
Confidence            9976532     123345899999999999643   6899999999999999999999999876654432          


Q ss_pred             --------------------------------HHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          263 --------------------------------DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       263 --------------------------------~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                      +.+.........+..++.++.+||.+||+.||++|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                            2233232222233458999999999999999999999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=342.03  Aligned_cols=257  Identities=23%  Similarity=0.371  Sum_probs=192.2

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|.+..++      +.||||+++.................+++..+|+||+++++++.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~   94 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTG------HVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI   94 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTC------CEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCC------eEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe
Confidence            456788999999999999999999987655      48999999876543332222222334567789999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++..|+||||+.+ +++.+.......+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus        95 ~~~~~~lv~e~~~~-~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  173 (318)
T 2dyl_A           95 TNTDVFIAMELMGT-CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISG  173 (318)
T ss_dssp             CSSEEEEEECCCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred             cCCcEEEEEeccCC-cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence            99999999999954 44444444567899999999999999999999995 99999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhccCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIP  272 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-~~~ei~~~i~~~~~~~  272 (620)
                      .....    .......||+.|+|||.+...  ....++.++||||||+++|+|++|..||... ...+....+.... .+
T Consensus       174 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~  248 (318)
T 2dyl_A          174 RLVDD----KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PP  248 (318)
T ss_dssp             -----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC-CC
T ss_pred             hccCC----ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC-CC
Confidence            65331    222345799999999998532  1336888999999999999999999999874 4555565555443 22


Q ss_pred             CCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 PIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+  ..+++++.++|.+||+.||.+||++.++++
T Consensus       249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          249 LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            223  468999999999999999999999999987

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.5e-40  Score=361.62  Aligned_cols=259  Identities=20%  Similarity=0.199  Sum_probs=204.7

Q ss_pred             ccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCce
Q 007046           29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI  108 (620)
Q Consensus        29 ~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nI  108 (620)
                      ..+..........+|++.+.||+|+||.||+|++..++      +.||||++.......     .++. .+++.++|+||
T Consensus        42 ~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~------~~vaiK~~~~~~~~~-----~~E~-~il~~l~hpni  109 (420)
T 1j1b_A           42 ATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG------ELVAIKKVLQDKRFK-----NREL-QIMRKLDHCNI  109 (420)
T ss_dssp             EEESSSSCCCEEEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEECCTTSC-----CHHH-HHHHTCCCTTB
T ss_pred             ccCCCCCCCcccceEEeeeEEeeCCCEEEEEEEECCCC------cEEEEEEecccchhH-----HHHH-HHHHHcCCCCc
Confidence            33333334444567999999999999999999987655      489999997543221     1122 35667799999


Q ss_pred             eEeEEEEEEC------CEEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE
Q 007046          109 CWLQGISVIN------GKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL  180 (620)
Q Consensus       109 v~l~g~~~~~------~~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl  180 (620)
                      +++++++...      ..+++||||+++++.+.+...  ....+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus       110 v~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl  189 (420)
T 1j1b_A          110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL  189 (420)
T ss_dssp             CCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE
T ss_pred             cceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEE
Confidence            9999998642      247899999999888776542  35789999999999999999999999999999999999999


Q ss_pred             ccC-CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Q 007046          181 NEA-DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD  259 (620)
Q Consensus       181 d~~-~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~  259 (620)
                      +.+ +.+||+|||+++.+...    .......||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..
T Consensus       190 ~~~~~~~kl~DFG~a~~~~~~----~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~  263 (420)
T 1j1b_A          190 DPDTAVLKLCDFGSAKQLVRG----EPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  263 (420)
T ss_dssp             ETTTTEEEECCCTTCEECCTT----CCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             eCCCCeEEeccchhhhhcccC----CCceeeeeCCCcCCHHHHcCC--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            965 56899999999876432    223456899999999998642  25889999999999999999999999998877


Q ss_pred             HHHHHHHhccCCC---------------C------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          260 EIYDAVVRRQEIP---------------P------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       260 ei~~~i~~~~~~~---------------~------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.+..+.+....+               .            ++..+++++.+||.+||.+||++||++.++++
T Consensus       264 ~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            6665554321110               0            23467899999999999999999999999997

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.9e-40  Score=336.11  Aligned_cols=253  Identities=23%  Similarity=0.328  Sum_probs=201.2

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEe
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      ...+..++|++.+.||+|+||.||+|++..++      +.||||+++......   ...+.++.  ..++.++|+||+++
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~   76 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREI--QNLKLFRHPHIIKL   76 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHTCCCTTBCCE
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCC------ceEEEEEeccccccchhHHHHHHHHH--HHHhcCCCCCEeEE
Confidence            34566789999999999999999999986554      489999997543211   12222222  25566789999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++...+..|+||||++ ++|.+.+..  ...+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+||+|
T Consensus        77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d  154 (276)
T 2h6d_A           77 YQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIAD  154 (276)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEecCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEee
Confidence            999999999999999998 577777753  35789999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||++......    .......||+.|+|||.+.+..  ..+.++|+||||+++|+|++|..||...+..++.+.+...  
T Consensus       155 fg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--  226 (276)
T 2h6d_A          155 FGLSNMMSDG----EFLRTSCGSPNYAAPEVISGRL--YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--  226 (276)
T ss_dssp             CCGGGCCCC-----------------CCTGGGTTSC--CCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--
T ss_pred             cccccccCCC----cceecccCCccccCHHHHcCCC--CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--
Confidence            9999876431    2233457999999999986431  2357999999999999999999999998888888777654  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...++..++.++.++|.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          227 VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            34467889999999999999999999999999998

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.1e-40  Score=338.01  Aligned_cols=258  Identities=22%  Similarity=0.337  Sum_probs=210.8

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+..       +..||+|+++...... ..+..+.  .+++.++|+||++++++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~-~~~~~E~--~~l~~l~h~~i~~~~~~   76 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNG-------HTKVAVKSLKQGSMSP-DAFLAEA--NLMKQLQHQRLVRLYAV   76 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETT-------TEEEEEEEECTTSSCH-HHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcC-------CcEEEEEEecCCcccH-HHHHHHH--HHHHhCCCcCcceEEEE
Confidence            455778899999999999999999998643       2479999997654332 2333332  24566689999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +. .+..|+||||++ ++|.+.+.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        77 ~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~  155 (279)
T 1qpc_A           77 VT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL  155 (279)
T ss_dssp             EC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             Ec-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcc
Confidence            76 456899999997 5777766543334799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..++...+... ...
T Consensus       156 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~  229 (279)
T 1qpc_A          156 ARLIEDNE--YTAREGAKFPIKWTAPEAINYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM  229 (279)
T ss_dssp             CEECSSSC--EECCTTCCCCTTTSCHHHHHHC---EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCC
T ss_pred             cccccCcc--cccccCCCCccCccChhhhccC---CCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-cCC
Confidence            98764321  1122344678899999998643   58889999999999999999 99999998888888777544 344


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+..+++++.+++.+||..||++||++.++++.|+.
T Consensus       230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            5678899999999999999999999999999987765

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.6e-40  Score=338.47  Aligned_cols=254  Identities=20%  Similarity=0.278  Sum_probs=206.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||+|++...... .....+.++. .+++.++||||+++++++.. 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~   77 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDG------KILVWKELDYGSMTEAEKQMLVSEV-NLLRELKHPNIVRYYDRIIDR   77 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEECTTCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEEEEEG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCC------cEEEEEEEEcccCCHHHHHHHHHHH-HHHHhcCCCCCCeEEEEEecC
Confidence            468999999999999999999987655      48999999765432 2222222232 34566689999999998865 


Q ss_pred             -CCEEEEEEecCCC-ChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeecccCCcEEEccCCcEEE
Q 007046          118 -NGKICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       118 -~~~~~IVmE~~~G-sLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~g-----IiHrDLKP~NILld~~~~vkL  188 (620)
                       +..+|+||||++| +|.+.+....  ...+++..++.++.||+.||+|||+.+     |+||||||+|||++.++.+||
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl  157 (279)
T 2w5a_A           78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL  157 (279)
T ss_dssp             GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEE
T ss_pred             CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEE
Confidence             5789999999985 7877776432  345999999999999999999999999     999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++.....   ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..++...+...
T Consensus       158 ~dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~  231 (279)
T 2w5a_A          158 GDFGLARILNHD---TSFAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG  231 (279)
T ss_dssp             CCCCHHHHC------CHHHHHHHSCCTTCCHHHHHCC----CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             ecCchheeeccc---cccccccCCCccccChHHhccC---CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc
Confidence            999999875321   1111234799999999998643   6889999999999999999999999999888888777655


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  307 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L  307 (620)
                      . .+.++..+++++.++|.+||+.||++||++.++++.+
T Consensus       232 ~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          232 K-FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             C-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             c-cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            4 3457788999999999999999999999999999843

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.2e-40  Score=348.20  Aligned_cols=260  Identities=22%  Similarity=0.308  Sum_probs=188.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++      +.||||+++.............+...+++..+||||++++++
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~   89 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSG------QIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA   89 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTTT------EEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEE
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCCC------CEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeE
Confidence            44578899999999999999999999976554      589999998765433333333333346777899999999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCCcEEEec
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~---~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      +..++..||||||++|++.+.+...   ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus        90 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~D  169 (327)
T 3aln_A           90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCD  169 (327)
T ss_dssp             EECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred             EEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEcc
Confidence            9999999999999999888877642   257899999999999999999999999 999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~  268 (620)
                      ||+++.....    .......||+.|+|||.+... ....++.++|+||||+++|+|++|..||.+.... +.+..+...
T Consensus       170 fg~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  245 (327)
T 3aln_A          170 FGISGQLVDS----IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG  245 (327)
T ss_dssp             CSSSCC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCS
T ss_pred             CCCceecccc----cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcC
Confidence            9999876421    122334799999999998432 1335889999999999999999999999875432 222222111


Q ss_pred             cCCCCC----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPPI----PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~~----p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       ..+.+    ...+++++.+||.+||+.||++||++.++++
T Consensus       246 -~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          246 -DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence             11222    2468999999999999999999999999987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=4.2e-40  Score=347.12  Aligned_cols=254  Identities=20%  Similarity=0.257  Sum_probs=202.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||+++............++. .+++.++|+||+++++++... 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~   82 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTG------EIVAIKKIEPFDKPLFALRTLREI-KILKHFKHENIITIFNIQRPDS   82 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCSSHHHHHHHHHHH-HHHHHCCCTTBCCEEEECCCSC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCC------cEEEEEeecccccchHHHHHHHHH-HHHHhCcCCCcCCeeeeecccc
Confidence            478999999999999999999986555      589999997654333332222332 345667899999999988754 


Q ss_pred             ----CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          119 ----GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       119 ----~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                          ...|+||||+.|+|.+.+..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           83 FENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA  159 (353)
T ss_dssp             STTCCCEEEEECCCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cCccceEEEEEeccCccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence                67999999999988887753   57999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCC-------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          195 HLLLGIPLPS-------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       195 ~~~~~~~~~~-------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      +.........       .......||+.|+|||++.+  ...++.++|+|||||++|+|++|..||.+.+..+.+..+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  237 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT--SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG  237 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHHHHHS--CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccccccCccccccchhhccccccccCCeeecc--CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            8764321111       11234579999999998753  23688999999999999999999999999887665554432


Q ss_pred             ccCCCC------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPP------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~------------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+.                              ....+++++.+||.+||..||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            211110                              12468999999999999999999999999997

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.8e-40  Score=337.60  Aligned_cols=256  Identities=21%  Similarity=0.235  Sum_probs=209.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-----h---HHHHHHHHHHHHHHHccCCCcee
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-----D---RMRVLLERLNDLFLKCQGVEGIC  109 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-----~---~~~~~~~~~~~~~l~~~~h~nIv  109 (620)
                      --.++|++.+.||+|+||.||+|.+..++      +.||||+++....     .   .......++..++.++.+||||+
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~   87 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTC------KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII   87 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcC------ceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence            34588999999999999999999986655      4899999976431     1   11222223333444555799999


Q ss_pred             EeEEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          110 WLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       110 ~l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      ++++++..++..|+||||++ |+|.+.+..  ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+||
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           88 QLKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             eeeeeeccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEE
Confidence            99999999999999999998 577777753  457999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      +|||++.....    ........||+.|+|||.+.+.   ....++.++|+||||+++|+|++|..||...+..+....+
T Consensus       166 ~dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  241 (298)
T 1phk_A          166 TDFGFSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI  241 (298)
T ss_dssp             CCCTTCEECCT----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             ecccchhhcCC----CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHH
Confidence            99999987642    2233445799999999997521   1335788999999999999999999999998888888877


Q ss_pred             HhccCCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          266 VRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       266 ~~~~~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .........+  ..++.++.++|.+||+.||++||++.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            7665443322  468999999999999999999999999987

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=6.1e-41  Score=370.44  Aligned_cols=250  Identities=22%  Similarity=0.331  Sum_probs=211.1

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +-.++|++.+.||+|+||.||+|++..++      +.||||++.....   .....+..+.  .+++.++||||++++++
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~E~--~~l~~l~hpniv~~~~~   94 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITG------QECAVKVISKRQVKQKTDKESLLREV--QLLKQLDHPNIMKLYEF   94 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEETTTCCBSSCHHHHHHHH--HHHTTCCCTTBCCEEEE
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCC------CEEEEEEEEhhhcccchHHHHHHHHH--HHHHhCCCCCCCcEEEE
Confidence            44578999999999999999999987665      4899999965432   2223333333  35667799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEec
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGD  190 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~D  190 (620)
                      +...+.+|+|||||. |+|.+.+.  ....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  172 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID  172 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence            999999999999998 57777775  45679999999999999999999999999999999999999   4678999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++.+..    .......+||+.|+|||++.+    .++.++|||||||++|+|++|.+||.+.+..+++..+.....
T Consensus       173 fg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  244 (484)
T 3nyv_A          173 FGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG----TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY  244 (484)
T ss_dssp             TTHHHHBCC----CCSHHHHTTGGGTCCHHHHHT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             eeeeEEccc----ccccccCCCCccccCceeecC----CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            999987642    122344579999999999854    588999999999999999999999999999999998887765


Q ss_pred             CCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+  ..+++++++||.+||+.||++||++.++++
T Consensus       245 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          245 TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            54433  578999999999999999999999999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.2e-40  Score=341.20  Aligned_cols=261  Identities=18%  Similarity=0.276  Sum_probs=205.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE-ECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV-ING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~-~~~  119 (620)
                      .+|++.+.||+|+||.||+|++..++.   ....||+|.++............++. .+++.++||||+++++++. .++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~~~~~avk~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEG-IIMKDFSHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC--------CEEEEEEEETTCCSHHHHHHHHHHH-HHHHTCCCTTBCCCCEEECCSSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCC---ceeEEEEEecccCCCHHHHHHHHHHH-HHHHhCCCCCEeeeeeEEEcCCC
Confidence            469999999999999999999765432   23569999998655433333333332 3567778999999999865 456


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ..|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             ceEEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence            78999999996 66666643 45678999999999999999999999999999999999999999999999999998664


Q ss_pred             CCCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          199 GIPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       199 ~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      .... .........||+.|+|||.+.+.   .++.++|+||||+++|+|++ |.+||.+.+..+....+.... ....+.
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  255 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-RLLQPE  255 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC-CCCCCT
T ss_pred             ccchhccccccCCCCCccccChHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC-CCCCCc
Confidence            3221 11223345688999999998644   68899999999999999999 677888777777766665443 445578


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+++++.+++.+||+.||++||++.++++.|...
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            8999999999999999999999999999987763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.4e-40  Score=348.14  Aligned_cols=269  Identities=20%  Similarity=0.269  Sum_probs=210.4

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -..+..++|++.+.||+|+||.||+|++.... +...++.||||++.............++. .+++.++||||++++++
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~  101 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP-NDPSPLQVAVKTLPEVCSEQDELDFLMEA-LIISKFNHQNIVRCIGV  101 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC---------CCEEEEEECCSSCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCC-CCCccceEEEEEeccccchhhHHHHHHHH-HHHhhCCCCCCCeEEEE
Confidence            34578899999999999999999999865332 12345689999997654333333233333 24556699999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCc
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADR  185 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~-----~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~  185 (620)
                      +...+..||||||++ |+|.+++.....     ..+++..++.++.||+.||.|||+++|+||||||+|||++.   +..
T Consensus       102 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~  181 (327)
T 2yfx_A          102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  181 (327)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             EcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence            999889999999997 577777765322     45899999999999999999999999999999999999984   446


Q ss_pred             EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA  264 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~  264 (620)
                      +||+|||+++....... ........||+.|+|||.+.+.   .++.++||||||+++|+|+| |..||......++...
T Consensus       182 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  257 (327)
T 2yfx_A          182 AKIGDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF  257 (327)
T ss_dssp             EEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             EEECccccccccccccc-cccCCCcCCCcceeCHhHhcCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH
Confidence            99999999986543211 1222345689999999998643   68899999999999999998 9999999888888877


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.... .+..+..+++++.++|.+||+.||.+||++.++++.|...
T Consensus       258 ~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          258 VTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            76543 4556788999999999999999999999999999977653

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=6.4e-40  Score=350.00  Aligned_cols=253  Identities=22%  Similarity=0.279  Sum_probs=207.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch----hHH---HHHHHHHHHHHHHccCCCceeEeEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE----DRM---RVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~----~~~---~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++....    ...   .....++..++..+.+||||+++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATG------HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCC------cEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            56999999999999999999986555      4899999976431    111   2222233333444458999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++...+..|+||||++| +|.+.+..  ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||
T Consensus       168 ~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG  245 (365)
T 2y7j_A          168 SYESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG  245 (365)
T ss_dssp             EEEBSSEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEeeCCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecC
Confidence            99999999999999985 67776653  3579999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCC---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ++..+..    .......+||+.|+|||++.+.   ....++.++|||||||++|+|++|..||...+....+..+....
T Consensus       246 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~  321 (365)
T 2y7j_A          246 FSCHLEP----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ  321 (365)
T ss_dssp             TCEECCT----TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             cccccCC----CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            9987643    2233456899999999998632   12357889999999999999999999999988888888777655


Q ss_pred             CCCCCC--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....+  ..+++++.++|.+||+.||++||++.++++
T Consensus       322 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          322 YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            443322  578999999999999999999999999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.7e-40  Score=354.57  Aligned_cols=249  Identities=19%  Similarity=0.256  Sum_probs=195.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHcc-------CCCceeEeE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ-------GVEGICWLQ  112 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~-------~h~nIv~l~  112 (620)
                      .++|++.++||+|+||.||+|++..++      +.||||+++.... ....+..+. .++..+.       +|+||++++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~-~~~~~~~E~-~~l~~l~~~~~~~~~~~~iv~~~  107 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGK------KFVAMKVVKSAEH-YTETALDEI-RLLKSVRNSDPNDPNREMVVQLL  107 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCHH-HHHHHHHHH-HHHHHHHHSCTTCGGGGGBCCEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCC------eEEEEEEEecCCc-chHHHHHHH-HHHHHHhhcCCCCCCcceeeeee
Confidence            578999999999999999999976654      5899999975432 222222222 2222221       388999999


Q ss_pred             EEEE----ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEEccCC---
Q 007046          113 GISV----INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEAD---  184 (620)
Q Consensus       113 g~~~----~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILld~~~---  184 (620)
                      +++.    ....+||||||+.|++++.+.......+++..++.++.||+.||+|||++ ||+||||||+|||++.++   
T Consensus       108 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~  187 (397)
T 1wak_A          108 DDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI  187 (397)
T ss_dssp             EEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHH
T ss_pred             cceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhh
Confidence            9987    34579999999999999998865557899999999999999999999998 999999999999999775   


Q ss_pred             ----------------------------------------------cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCC
Q 007046          185 ----------------------------------------------RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA  218 (620)
Q Consensus       185 ----------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmA  218 (620)
                                                                    .+||+|||+++....      ......||+.|+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------~~~~~~gt~~y~a  261 (397)
T 1wak_A          188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------CSCSCCSCGGGCC
T ss_pred             hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc------cCccCCCCCcccC
Confidence                                                          799999999987632      2345689999999


Q ss_pred             cccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccCCC--------------------
Q 007046          219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS------VDEIYDAVVRRQEIP--------------------  272 (620)
Q Consensus       219 PE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~------~~ei~~~i~~~~~~~--------------------  272 (620)
                      ||++.+.   .++.++|||||||++|||++|..||...+      ..+.+..+......+                    
T Consensus       262 PE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  338 (397)
T 1wak_A          262 LEVLIGS---GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD  338 (397)
T ss_dssp             HHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred             ChhhcCC---CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence            9999754   68899999999999999999999997654      222222222211110                    


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          ..+...++++.+||.+||+.||++||++.++++
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                                112334577899999999999999999999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.2e-40  Score=346.65  Aligned_cols=252  Identities=21%  Similarity=0.246  Sum_probs=191.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++............++. .+++.++||||+++++++.... 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDD------CNYAIKRIRLPNRELAREKVMREV-KALAKLEHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTC------CEEEEEEEECCSTTTHHHHHHHHH-HHHTSCCCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCC------cEEEEEEeecCCchhHHHHHHHHH-HHHHhCCCCCEeeEEEEEEEecc
Confidence            46999999999999999999987655      479999997654433333333333 3566779999999999986543 


Q ss_pred             --------------------------------------------------------EEEEEEecCCC-ChHHHHHHhcC-
Q 007046          120 --------------------------------------------------------KICIIMKFYEG-SVGDRMAQLKG-  141 (620)
Q Consensus       120 --------------------------------------------------------~~~IVmE~~~G-sLld~l~~~~~-  141 (620)
                                                                              ..|+|||||+| +|.+.+..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    38999999985 77776654221 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCC---------CCCCCCcCC
Q 007046          142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP---------SSDLPRRLG  212 (620)
Q Consensus       142 ~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~---------~~~~~~~~G  212 (620)
                      ...++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........         ........|
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            33566778999999999999999999999999999999999999999999999877542211         122345679


Q ss_pred             CCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhc
Q 007046          213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY  292 (620)
Q Consensus       213 T~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~  292 (620)
                      |+.|+|||++.+.   .++.++|+|||||++|+|++|..|+..  .......+.. ...+..+...++++.++|.+||+.
T Consensus       239 t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~  312 (332)
T 3qd2_B          239 TKLYMSPEQIHGN---NYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRN-LKFPLLFTQKYPQEHMMVQDMLSP  312 (332)
T ss_dssp             CGGGSCHHHHHCC---CCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHT-TCCCHHHHHHCHHHHHHHHHHHCS
T ss_pred             CcCccChHHhcCC---CCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhc-cCCCcccccCChhHHHHHHHHccC
Confidence            9999999999754   688999999999999999998776521  1222222222 222222345678899999999999


Q ss_pred             CcCCCCCHHHHHH
Q 007046          293 DLRSRPLMTDILR  305 (620)
Q Consensus       293 dP~~RPs~~eil~  305 (620)
                      ||++||++.++++
T Consensus       313 ~p~~Rps~~~~l~  325 (332)
T 3qd2_B          313 SPTERPEATDIIE  325 (332)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CCCcCCCHHHHhh
Confidence            9999999999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=4.4e-40  Score=351.58  Aligned_cols=250  Identities=22%  Similarity=0.306  Sum_probs=200.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      |--+++|++.+.||+|+||.||+|.+..++      +.||||++........ .....++. .+++.++||||+++++++
T Consensus        38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~  110 (371)
T 4exu_A           38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSG------EKVAIKKLSRPFQSEIFAKRAYREL-LLLKHMQHENVIGLLDVF  110 (371)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSTTSSHHHHHHHHHHH-HHHHHCCCTTBCCCSEEE
T ss_pred             ecccccEEEEeEEecCCCeEEEEEEECCCC------CEEEEEEecccccchhHHHHHHHHH-HHHHhcCCCCchhhhhhe
Confidence            334578999999999999999999987655      4899999976543322 22222222 356667899999999999


Q ss_pred             EECCEE------EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          116 VINGKI------CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       116 ~~~~~~------~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      ...+..      |+||||+.|++.+.+    ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       111 ~~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~  186 (371)
T 4exu_A          111 TPASSLRNFYDFYLVMPFMQTDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL  186 (371)
T ss_dssp             CSCSSSTTCCCCEEEEECCCEEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             eccCCcccceeEEEEEccccccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEE
Confidence            876654      999999998876665    3459999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++...      .......||+.|+|||.+.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus       187 Dfg~a~~~~------~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  258 (371)
T 4exu_A          187 DFGLARHAD------AEMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT  258 (371)
T ss_dssp             STTCC--------------CTTCCCTTSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ecCcccccc------cCcCCcccCccccCHHHhcCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            999998653      233456899999999998642  368899999999999999999999999988777766665422


Q ss_pred             CCC-----------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIP-----------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~-----------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+                             ..+..+++++.+||.+||+.||++||++.++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            111                             012467999999999999999999999999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.6e-40  Score=342.53  Aligned_cols=256  Identities=21%  Similarity=0.288  Sum_probs=202.7

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..++|++.+.||+|+||.||+|.+..++      +.||+|++..........+..+..  +++.++||||+++++++..+
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~e~~--~l~~l~h~~i~~~~~~~~~~   88 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETG------ALAAAKVIETKSEEELEDYIVEIE--ILATCDHPYIVKLLGAYYHD   88 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTC------CEEEEEEEC----CCHHHHHHHHH--HHHHCCCTTBCCEEEEEECC
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCC------cEEEEEEecCCCHHHHHHHHHHHH--HHhcCCCCCEeeeeeeeeeC
Confidence            3478999999999999999999987655      489999997655444444444432  45567899999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|+||||++|++++.+.......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++....
T Consensus        89 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence            99999999999654544433356779999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-CCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIP  275 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-~~~p  275 (620)
                      ..   ........||+.|+|||.+...  ....++.++|+||||+++|+|++|..||...+..+....+...... ...+
T Consensus       169 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  245 (302)
T 2j7t_A          169 KT---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP  245 (302)
T ss_dssp             HH---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSG
T ss_pred             cc---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCc
Confidence            11   1122345799999999997411  1336888999999999999999999999998887777666554332 2345


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..++.++.++|.+||..||++||++.++++
T Consensus       246 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          246 SKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            678999999999999999999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.3e-39  Score=339.55  Aligned_cols=252  Identities=19%  Similarity=0.200  Sum_probs=199.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHH-----ccCCCceeEeE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-----CQGVEGICWLQ  112 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~-----~~~h~nIv~l~  112 (620)
                      +-.++|++.+.||+|+||.||+|.+...     .++.||||+++..... ...+..+. .++..     ...|+++++++
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~e~-~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKA-----GGRHVAVKIVKNVDRY-CEAARSEI-QVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTT-----TTEEEEEEEECSSHHH-HHHHHHHH-HHHHHHHHHCTTCTTCBCCEE
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCC-----CCcEEEEEEEecCCch-hHHHHHHH-HHHHHhhhcCCCCceeeEeee
Confidence            3457899999999999999999987432     2368999999754321 12222222 12111     22455799999


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc----------
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----------  182 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~----------  182 (620)
                      +++...+..||||||+.+++.+.+......++++..+..++.||+.||+|||+++|+||||||+|||++.          
T Consensus        84 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~  163 (339)
T 1z57_A           84 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK  163 (339)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred             cccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCc
Confidence            9999999999999999999999987655567999999999999999999999999999999999999987          


Q ss_pred             ---------CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 007046          183 ---------ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR  253 (620)
Q Consensus       183 ---------~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf  253 (620)
                               ++.+||+|||+++...      .......||+.|+|||++.+.   .++.++|+|||||++|||++|..||
T Consensus       164 ~~~~~~~~~~~~~kl~Dfg~~~~~~------~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf  234 (339)
T 1z57_A          164 IKRDERTLINPDIKVVDFGSATYDD------EHHSTLVSTRHYRAPEVILAL---GWSQPCDVWSIGCILIEYYLGFTVF  234 (339)
T ss_dssp             --CEEEEESCCCEEECCCSSCEETT------SCCCSSCSCGGGCCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cccccccccCCCceEeeCcccccCc------cccccccCCccccChHHhhCC---CCCcchhhHHHHHHHHHHHhCCCCC
Confidence                     6689999999998642      223456899999999999643   6889999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhccCCC------------------------------------------CCCCCCCHHHHHHHHHhhh
Q 007046          254 CGRSVDEIYDAVVRRQEIP------------------------------------------PIPSGLPPAVENVLLGCFE  291 (620)
Q Consensus       254 ~~~~~~ei~~~i~~~~~~~------------------------------------------~~p~~~s~~l~~Li~~cL~  291 (620)
                      ...+..+....+.......                                          ..+...++++.+||.+||+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  314 (339)
T 1z57_A          235 PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE  314 (339)
T ss_dssp             CCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence            9888776655443321110                                          0112346789999999999


Q ss_pred             cCcCCCCCHHHHHH
Q 007046          292 YDLRSRPLMTDILR  305 (620)
Q Consensus       292 ~dP~~RPs~~eil~  305 (620)
                      .||++||++.|+++
T Consensus       315 ~dP~~Rpt~~ell~  328 (339)
T 1z57_A          315 YDPAKRITLREALK  328 (339)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             cCcccccCHHHHhc
Confidence            99999999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.8e-40  Score=335.81  Aligned_cols=253  Identities=21%  Similarity=0.265  Sum_probs=202.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||||+++............++. .+++.++|+||+++++++..++.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEGGGCTTHHHHHHHHH-HHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCC------cEEEEEEeeeccchhhhHHHHHHH-HHHHhcCCCCceeeeeEEEcCCE
Confidence            57999999999999999999987655      489999997554333333333333 35666799999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .|+||||++| +|.+.+.  ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        80 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             EEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             EEEEEEecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            9999999985 6666653  346799999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~~~~p~~~  278 (620)
                      .. .........||+.|+|||.+.+.  ..++.++|+||||+++|+|++|..||...... ..+..+............+
T Consensus       158 ~~-~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (276)
T 2yex_A          158 NN-RERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI  234 (276)
T ss_dssp             TT-EECCBCCCCSCGGGCCGGGGTCS--SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGS
T ss_pred             Cc-chhcccCCccccCccChHHHhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhc
Confidence            11 11223456799999999998643  12467899999999999999999999876543 3333343333333334578


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++++.++|.+||..||++||++.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          235 DSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999999999999987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.3e-40  Score=337.86  Aligned_cols=253  Identities=21%  Similarity=0.332  Sum_probs=203.6

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...++.++|++.+.||+|+||.||+|.+.        ++.||||+++....  ...+..+.  .+++.++|+||++++++
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~--~~~~~~E~--~~l~~l~h~~iv~~~~~   82 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYR--------GNKVAVKCIKNDAT--AQAFLAEA--SVMTQLRHSNLVQLLGV   82 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEET--------TEEEEEEECCCCC----HHHHHTH--HHHTTCCCTTBCCEEEE
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEc--------CCEEEEEEecchhH--HHHHHHHH--HHHHhCCCCCEeeEEEE
Confidence            34578899999999999999999999863        35799999976542  22333332  35667799999999998


Q ss_pred             EEEC-CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          115 SVIN-GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       115 ~~~~-~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +... +..|+||||++| +|.+.+.......+++..+..++.||+.||.|||+++++||||||+||+++.++.+||+|||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg  162 (278)
T 1byg_A           83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG  162 (278)
T ss_dssp             ECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             EEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecc
Confidence            7654 468999999985 88887765433458999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++....      ......+|+.|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..++...+... ..
T Consensus       163 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~  232 (278)
T 1byg_A          163 LTKEASS------TQDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YK  232 (278)
T ss_dssp             C------------------CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-CC
T ss_pred             ccccccc------cccCCCccccccCHHHhCCC---CCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CC
Confidence            9876532      22334688999999998643   68899999999999999998 99999988887777766543 34


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +..+..+++++.++|.+||..||++||++.++++.|+.
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence            56778899999999999999999999999999997765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8.1e-40  Score=343.69  Aligned_cols=250  Identities=17%  Similarity=0.186  Sum_probs=198.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHc-----cCCCceeEeEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC-----QGVEGICWLQGI  114 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~-----~~h~nIv~l~g~  114 (620)
                      .++|++.+.||+|+||.||+|.+..+++     +.||+|+++..... ...+.. +..++..+     ..+.+++.++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~vavK~~~~~~~~-~~~~~~-E~~~l~~l~~~~~~~~~~~~~~~~~   90 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGK-----SQVALKIIRNVGKY-REAARL-EINVLKKIKEKDKENKFLCVLMSDW   90 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTT-----EEEEEEEECSCHHH-HHHHHH-HHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCc-----eEEEEEEEcccccc-hhHHHH-HHHHHHHHhhcCCCCceeEEEeeee
Confidence            5789999999999999999999876542     57999999754322 122222 22222111     123349999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE--------------
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--------------  180 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl--------------  180 (620)
                      +...+..||||||+.+++++.+......++++..++.++.||+.||+|||+++|+||||||+|||+              
T Consensus        91 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           91 FNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             eeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccc
Confidence            999999999999999999998876555689999999999999999999999999999999999999              


Q ss_pred             -----ccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          181 -----NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       181 -----d~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                           +.++.+||+|||+++...      .......||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~------~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDH------EHHTTIVATRHYRPPEVILEL---GWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETT------SCCCSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCCCcEEEeecCcccccc------ccccCCcCCCcccCCeeeecC---CCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                 667899999999998642      223456899999999999643   688999999999999999999999998


Q ss_pred             CCHHHHHHHHHhccCCCC------------------------------------------CCCCCCHHHHHHHHHhhhcC
Q 007046          256 RSVDEIYDAVVRRQEIPP------------------------------------------IPSGLPPAVENVLLGCFEYD  293 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~~~------------------------------------------~p~~~s~~l~~Li~~cL~~d  293 (620)
                      .+..+.+..+.......+                                          .....+.++.+||.+||+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  321 (355)
T 2eu9_A          242 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD  321 (355)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred             CCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence            887765554433221110                                          01122468899999999999


Q ss_pred             cCCCCCHHHHHH
Q 007046          294 LRSRPLMTDILR  305 (620)
Q Consensus       294 P~~RPs~~eil~  305 (620)
                      |++||++.++++
T Consensus       322 P~~Rpt~~e~l~  333 (355)
T 2eu9_A          322 PAQRITLAEALL  333 (355)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhhCcCHHHHhc
Confidence            999999999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=6.7e-40  Score=374.79  Aligned_cols=260  Identities=20%  Similarity=0.277  Sum_probs=206.2

Q ss_pred             CcCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .++...+.+.. +||+|+||.||+|.+....    .++.||||+++......  ...+..+.  .+++.++|+||+++++
T Consensus       364 ~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~E~--~il~~l~hpnIv~l~~  437 (635)
T 4fl3_A          364 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKK----VVKTVAVKILKNEANDPALKDELLAEA--NVMQQLDNPYIVRMIG  437 (635)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSS----CEEEEEEEEECGGGGCGGGHHHHHHHH--HHHHHCCCTTBCCEEE
T ss_pred             cccchhccccCCEeccCCCEEEEEEEEcCCC----cceEEEEEEeccccCCHHHHHHHHHHH--HHHHhCCCCCEeeEEE
Confidence            35555666654 8999999999999764322    34689999997654322  23333333  3556678999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.. +.++|||||++| +|.+++.  ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       438 ~~~~-~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFG  514 (635)
T 4fl3_A          438 ICEA-ESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG  514 (635)
T ss_dssp             EEES-SSEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTT
T ss_pred             EEec-CCEEEEEEccCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcC
Confidence            9864 568999999984 6666664  45679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++.+..............||+.|+|||++.+.   .++.++|||||||++|||++ |..||.+.+..++...+.... .
T Consensus       515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~---~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~  590 (635)
T 4fl3_A          515 LSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-R  590 (635)
T ss_dssp             HHHHTTC-------------CGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-C
T ss_pred             CccccccCccccccccCCCCceeeeChhhhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C
Confidence            998775432222233344678999999999643   68999999999999999998 999999999988888776544 5


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ...+..+++++.+||.+||+.||++||++.+|++.|+.
T Consensus       591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            56788999999999999999999999999999987765

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5.9e-40  Score=353.98  Aligned_cols=253  Identities=21%  Similarity=0.265  Sum_probs=203.3

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ...+|++.+.||+|+||.||+|++..++       .||+|++........     ++. .+++.++|+||+++++++...
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-------~~aikk~~~~~~~~~-----~E~-~il~~l~h~niv~l~~~~~~~  104 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESD-------EVAIKKVLQDKRFKN-----REL-QIMRIVKHPNVVDLKAFFYSN  104 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTE-------EEEEEEEECCTTSCC-----HHH-HHHHTCCCTTBCCEEEEEEEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCC-------eEEEEEEecCcchHH-----HHH-HHHHhCCCCCcceEEEEEEec
Confidence            4467999999999999999999976554       488888865432211     122 356677999999999999654


Q ss_pred             C------EEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc-cCCcEEEe
Q 007046          119 G------KICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLG  189 (620)
Q Consensus       119 ~------~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld-~~~~vkL~  189 (620)
                      +      .+|+||||+++++++.+...  ....+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+
T Consensus       105 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~  184 (394)
T 4e7w_A          105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI  184 (394)
T ss_dssp             SSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred             CCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEe
Confidence            3      38999999999887766532  357899999999999999999999999999999999999999 78999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++.+..    ........||+.|+|||.+.+.  ..++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus       185 DFG~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~  258 (394)
T 4e7w_A          185 DFGSAKILIA----GEPNVSYICSRYYRAPELIFGA--TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVL  258 (394)
T ss_dssp             CCTTCEECCT----TCCCCSSCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             eCCCcccccC----CCCCcccccCcCccCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            9999987643    2223456789999999998643  258899999999999999999999999988777666655421


Q ss_pred             CCC---------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhC
Q 007046          270 EIP---------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSD  310 (620)
Q Consensus       270 ~~~---------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~  310 (620)
                      ..+                           .++..+++++.+||.+||++||++||++.++++ .+.+.
T Consensus       259 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             CCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             CCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            111                           123458899999999999999999999999997 34443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=9.4e-41  Score=346.90  Aligned_cols=265  Identities=21%  Similarity=0.257  Sum_probs=204.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|+.++|++.+.||+|+||.||+|.+..++      +.||||++..........+..+.  .+++.++||||+++++++.
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~   96 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDG------HFYALKRILCHEQQDREEAQREA--DMHRLFNHPNILRLVAYCL   96 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTC------CEEEEEEEEESSHHHHHHHHHHH--HHHHTCCCTTBCCCCEEEE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCC------cEEEEEEEecCCHHHHHHHHHHH--HHHhhcCCCCeeeEEEEEE
Confidence            477889999999999999999999976655      48999999765544444443333  3567779999999999987


Q ss_pred             E----CCEEEEEEecCCC-ChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          117 I----NGKICIIMKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       117 ~----~~~~~IVmE~~~G-sLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      .    ....|+||||+++ +|.+.+...  ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~  176 (317)
T 2buj_A           97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLM  176 (317)
T ss_dssp             EEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             eccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEE
Confidence            3    3478999999995 777777654  34679999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCC------CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH
Q 007046          190 DVGIPHLLLGIPLPS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEI  261 (620)
Q Consensus       190 DFGla~~~~~~~~~~------~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~--~ei  261 (620)
                      |||+++.........      .......||+.|+|||.+.+.....++.++||||||+++|+|++|..||.....  ..+
T Consensus       177 dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  256 (317)
T 2buj_A          177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV  256 (317)
T ss_dssp             CCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH
T ss_pred             ecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh
Confidence            999987642110000      001123579999999998754333478899999999999999999999953211  112


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+ ......+.+..+++++.++|.+||+.||.+||++.++++.|...
T Consensus       257 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          257 ALAV-QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             HHHH-HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hHHh-hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            2222 22333444568899999999999999999999999999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=9.7e-40  Score=333.46  Aligned_cols=248  Identities=21%  Similarity=0.302  Sum_probs=202.6

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh------HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED------RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||+|+++.....      ....+..+.  .+++.++||||++++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~~avK~~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i~~~~~~   76 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTG------KEYAAKFIKKRRLSSSRRGVSREEIEREV--NILREIRHPNIITLHDI   76 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCC------CeeehHHhhhccccccccchHHHHHHHHH--HHHHhCCCCCeeehhhe
Confidence            57999999999999999999987655      48999999764321      122333332  24566789999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEEe
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLG  189 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL~  189 (620)
                      +...+..|+||||++ ++|.+.+..  ...+++..++.++.||+.||.|||+++|+||||||+||+++.++    .+||+
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           77 FENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             ecCCCeEEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence            999999999999997 577777653  45799999999999999999999999999999999999998877    89999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++.....    .......||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||.+.+..+....+....
T Consensus       155 dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  227 (283)
T 3bhy_A          155 DFGIAHKIEAG----NEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN  227 (283)
T ss_dssp             CCTTCEECC------------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC
T ss_pred             ecccceeccCC----CcccccCCCcCccCcceecCC---CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcc
Confidence            99999876321    223445799999999998643   68899999999999999999999999998888877775443


Q ss_pred             CCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...  ..+..+++.+.++|.+||..||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            322  123578999999999999999999999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.6e-40  Score=358.58  Aligned_cols=252  Identities=20%  Similarity=0.263  Sum_probs=190.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-------HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-------RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-------~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      .++|++.+.||+|+||.||+|.+..++      +.||||++......       .....+.++. .+++.++||||++++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~l~  206 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTC------KKVAIRIISKRKFAIGSAREADPALNVETEI-EILKKLNHPCIIKIK  206 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEEGGGGTTC--------CCHHHHH-HHHHHCCCTTBCCCC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCC------cEEEEEEEEechhcccccccchhHHHHHHHH-HHHHhCCCCCEeeEE
Confidence            478999999999999999999987665      48999999754311       0111122222 355667999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC---cEEE
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVL  188 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~---~vkL  188 (620)
                      +++. .+..||||||++| +|.+.+.  ....+++..+..++.||+.||+|||+++|+||||||+|||++.++   .+||
T Consensus       207 ~~~~-~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          207 NFFD-AEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             EEEE-SSEEEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             EEEe-cCceEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEE
Confidence            9975 5678999999984 6666654  457899999999999999999999999999999999999997554   5999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVR  267 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~  267 (620)
                      +|||+++....    .......+||+.|+|||++.+.....++.++|+|||||++|+|++|..||...... .+...+..
T Consensus       284 ~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~  359 (419)
T 3i6u_A          284 TDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  359 (419)
T ss_dssp             CCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred             eecccceecCC----CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence            99999987632    22334568999999999986433457889999999999999999999999865433 33444433


Q ss_pred             ccCCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....  .....+++++.+||.+||+.||++||++.++++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            32211  122578999999999999999999999999997

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.5e-40  Score=343.74  Aligned_cols=268  Identities=19%  Similarity=0.327  Sum_probs=208.0

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      .....+..++|++.+.||+|+||.||+|.+....  ...++.||||++..........+.++.  .+++.++|+||++++
T Consensus        33 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~  108 (326)
T 2w1i_A           33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQ--DNTGEVVAVKKLQHSTEEHLRDFEREI--EILKSLQHDNIVKYK  108 (326)
T ss_dssp             ----CCCGGGEEEEEEEECCSSEEEEEEEECTTS--SSCCEEEEEEEESSCCSHHHHHHHHHH--HHHHTCCCTTBCCEE
T ss_pred             cCccccCHHHceeeeeeccCCCeEEEEEEecccc--CCCceEEEEEEeccCCHHHHHHHHHHH--HHHHhCCCCCeeeEE
Confidence            3456678889999999999999999999864321  234578999999876554444444433  355667999999999


Q ss_pred             EEEEECC--EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          113 GISVING--KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       113 g~~~~~~--~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                      +++...+  .+++||||++| +|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus       109 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~  187 (326)
T 2w1i_A          109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG  187 (326)
T ss_dssp             EEECC----CCEEEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             EEEEecCCCceEEEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEe
Confidence            9986543  68999999985 77777654 44679999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-----------  258 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-----------  258 (620)
                      |||+++................+|+.|+|||.+.+.   .++.++||||||+++|+|+||..||.....           
T Consensus       188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~  264 (326)
T 2w1i_A          188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ  264 (326)
T ss_dssp             CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCC
T ss_pred             cCcchhhccccccccccccCCCCceeEECchhhcCC---CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccc
Confidence            999998764322111122344678889999998643   578899999999999999999999864211           


Q ss_pred             -----HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          259 -----DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       259 -----~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                           ..+.. ........+.+..+++++.++|.+||+.||++||++.++++.|+.
T Consensus       265 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          265 GQMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             THHHHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhHHHHHH-HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                 01222 222333455678899999999999999999999999999997765

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.4e-40  Score=354.01  Aligned_cols=250  Identities=21%  Similarity=0.265  Sum_probs=187.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +--+++|++.+.||+|+||.||+|.+..++      +.||||++......  ....+.++.  .+++.++|+||++++++
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~--~~l~~l~hpnIv~~~~~   96 (367)
T 2fst_X           25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTYREL--RLLKHMKHENVIGLLDV   96 (367)
T ss_dssp             EEEETTEEEEEECC----CCEEEEEETTTT------EEEEEEECSSTTSSHHHHHHHHHHH--HHHHHCCCTTBCCCSEE
T ss_pred             cCCCCceEEeeEEeecCCeEEEEEEECCCC------CEEEEEEeCccccCHHHHHHHHHHH--HHHHhCCCCCCCcEEEE
Confidence            334588999999999999999999976655      58999999764322  222222222  35666789999999999


Q ss_pred             EEEC------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEE
Q 007046          115 SVIN------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       115 ~~~~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL  188 (620)
                      +...      ..+|+|||++.++|.+.+.   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL  173 (367)
T 2fst_X           97 FTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  173 (367)
T ss_dssp             ECSCSSGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             EecCCccccCCeEEEEecccCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEE
Confidence            8654      5689999999888877764   367999999999999999999999999999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+++....      ......||+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus       174 ~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~  245 (367)
T 2fst_X          174 LDFGLARHTAD------EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  245 (367)
T ss_dssp             CC---------------------CCCTTCCHHHHTTC--CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             eeccccccccc------cCCCcCcCcCccChHHHcCC--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999986532      23456899999999998642  36889999999999999999999999998887776666542


Q ss_pred             cCCC---------------------C--------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIP---------------------P--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~---------------------~--------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+                     .        ....+++++.+||.+||..||++||++.++++
T Consensus       246 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          246 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            2111                     0        11357899999999999999999999999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1e-39  Score=349.96  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=199.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCC-----ceeEeEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-----GICWLQGI  114 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~-----nIv~l~g~  114 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||+++..... .... ..+..++..+.+|+     +|++++++
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~-~~~~-~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQ------EWVAIKIIKNKKAF-LNQA-QIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECSSHHH-HHHH-HHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCC------cEEEEEEEeccHHH-HHHH-HHHHHHHHHHHhcccccceeEEEeeee
Confidence            478999999999999999999976654      58999999754321 1222 22222222333344     59999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeecccCCcEEEc--cCCcEEEec
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--SKGILVLNLKPFNFILN--EADRAVLGD  190 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH--s~gIiHrDLKP~NILld--~~~~vkL~D  190 (620)
                      +...+..||||||++|+|.+.+.......+++..+..++.||+.||.|||  +.||+||||||+|||++  .++.+||+|
T Consensus       125 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             eccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            99999999999999999999988755567999999999999999999999  57899999999999995  478899999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++...      .......||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+..+.+..+.....
T Consensus       205 FG~a~~~~------~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  275 (382)
T 2vx3_A          205 FGSSCQLG------QRIYQYIQSRFYRSPEVLLGM---PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG  275 (382)
T ss_dssp             CTTCEETT------CCCCSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             ccCceecc------cccccccCCccccChHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            99998763      233456899999999999754   689999999999999999999999999888887777665322


Q ss_pred             CCC----------------CCCC----------------------------------------------CCHHHHHHHHH
Q 007046          271 IPP----------------IPSG----------------------------------------------LPPAVENVLLG  288 (620)
Q Consensus       271 ~~~----------------~p~~----------------------------------------------~s~~l~~Li~~  288 (620)
                      .++                ++..                                              .++++.+||.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  355 (382)
T 2vx3_A          276 IPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR  355 (382)
T ss_dssp             SCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHH
Confidence            111                0000                                              01478999999


Q ss_pred             hhhcCcCCCCCHHHHHH
Q 007046          289 CFEYDLRSRPLMTDILR  305 (620)
Q Consensus       289 cL~~dP~~RPs~~eil~  305 (620)
                      ||+.||++|||+.++++
T Consensus       356 mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          356 MLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HTCSCTTTSCCHHHHTT
T ss_pred             hcCCChhhCCCHHHHhc
Confidence            99999999999999987

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-40  Score=354.13  Aligned_cols=265  Identities=19%  Similarity=0.287  Sum_probs=200.3

Q ss_pred             CcCCC--CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           37 WIKPS--ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        37 ~I~~~--~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +|.++  .|++.+.||+|+||.||+|++..++.   ....||+|.++..........+.++. .+++.++||||++++++
T Consensus        83 ~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~~~~~  158 (373)
T 3c1x_A           83 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEG-IIMKDFSHPNVLSLLGI  158 (373)
T ss_dssp             BCCSTTEEEEEEEEEECCSSSEEEEEEEEETTT---EEEEEEEEECCSCSCSHHHHHHHHHH-TTSTTCCCTTBCCCCEE
T ss_pred             ccChhhceeecCcEeeeCCCeEEEEEEEECCCC---cEEEEEEEEcCCCCCHHHHHHHHHHH-HHHHhCCCCCcceEEEE
Confidence            34444  47889999999999999999764331   23579999997654333222222222 25666799999999998


Q ss_pred             EEE-CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          115 SVI-NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       115 ~~~-~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +.. ++..|+||||++| +|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus       159 ~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG  237 (373)
T 3c1x_A          159 CLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG  237 (373)
T ss_dssp             ECCCSSCCEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred             EEcCCCCeEEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecc
Confidence            754 5678999999985 67666643 45678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          193 IPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       193 la~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      +++........ ........+|+.|+|||.+.+.   .++.++|||||||++|||+| |.+||.+.+..++...+.... 
T Consensus       238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~-  313 (373)
T 3c1x_A          238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-  313 (373)
T ss_dssp             --------------------CCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC-
T ss_pred             ccccccccccccccccCCCCCcccccChHHhcCC---CCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC-
Confidence            99876432211 1122345688899999998643   68899999999999999999 788898877767666665443 


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ....|..+++++.++|.+||+.||++||++.++++.|...
T Consensus       314 ~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            4456788999999999999999999999999999987764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.1e-39  Score=336.45  Aligned_cols=258  Identities=19%  Similarity=0.298  Sum_probs=199.7

Q ss_pred             hccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc
Q 007046           28 VATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        28 ~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n  107 (620)
                      .........+.+.++|++.+.||+|+||.||+|++..++      +.||||+++......    ..++..++..+.+|+|
T Consensus        23 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~----~~~E~~~l~~l~~~~~   92 (330)
T 3nsz_A           23 WDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNN------EKVVVKILKPVKKKK----IKREIKILENLRGGPN   92 (330)
T ss_dssp             HCGGGCCCCCEEGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECSCCHHH----HHHHHHHHHHHTTSTT
T ss_pred             HHhhhhhhcccCCCceEEEEEecccCCeEEEEEEECCCC------cEEEEEEecccchHH----HHHHHHHHHHcCCCCC
Confidence            333444566677899999999999999999999987665      489999997654322    2233334445556999


Q ss_pred             eeEeEEEEEE--CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-
Q 007046          108 ICWLQGISVI--NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-  184 (620)
Q Consensus       108 Iv~l~g~~~~--~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-  184 (620)
                      |+++++++..  ....++||||++|..+..+..    .+++..+..++.||+.||+|||++||+||||||+|||++.++ 
T Consensus        93 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~  168 (330)
T 3nsz_A           93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR  168 (330)
T ss_dssp             BCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             EEEeeeeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCC
Confidence            9999999987  667999999999644444332    489999999999999999999999999999999999999777 


Q ss_pred             cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYD  263 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-~~~ei~~  263 (620)
                      .+||+|||+++....    ........||+.|+|||.+.+  ...++.++|||||||++|+|++|..||... ...+.+.
T Consensus       169 ~~kl~Dfg~a~~~~~----~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~  242 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHP----GQEYNVRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV  242 (330)
T ss_dssp             EEEECCCTTCEECCT----TCCCCSCCSCGGGCCHHHHTT--CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             EEEEEeCCCceEcCC----CCccccccccccccChhhhcC--CCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence            899999999987642    223345689999999999864  236889999999999999999999998543 3322222


Q ss_pred             HHHh-------------ccC----------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVR-------------RQE----------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~-------------~~~----------------------~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..             ...                      ....+..+++++.+||.+||+.||++|||++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            2211             100                      01112237999999999999999999999999997

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.5e-40  Score=340.33  Aligned_cols=264  Identities=22%  Similarity=0.264  Sum_probs=191.8

Q ss_pred             CCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        33 ~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..+..+..++|++.+.||+|+||.||+|.+..++      +.||||++...........+.++. ..++.++||||++++
T Consensus         7 ~~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~   79 (303)
T 2vwi_A            7 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKK------EKVAIKRINLEKCQTSMDELLKEI-QAMSQCHHPNIVSYY   79 (303)
T ss_dssp             ------CCCCCEEEEECC---CCCEEEEEC----------CEEEEECCC-----------------CCCCCCCTTBCCEE
T ss_pred             ccccccchhhhhhhheeccccceEEEEEEECCCC------cEEEEEEEEhhhcchhHHHHHHHH-HHHhhcCCCCEeeEE
Confidence            3456688999999999999999999999876554      479999987544322222122221 245566899999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR  185 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~  185 (620)
                      +++...+..|+||||++ |+|.+.+...      ....+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  159 (303)
T 2vwi_A           80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS  159 (303)
T ss_dssp             EEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC
T ss_pred             EEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCC
Confidence            99999999999999997 5777776542      2456899999999999999999999999999999999999999999


Q ss_pred             EEEeccCCcccccCCCC--CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPL--PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~--~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      +||+|||+++.......  .........||+.|+|||.+.+.  ..++.++|+||||+++|+|++|..||......+...
T Consensus       160 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  237 (303)
T 2vwi_A          160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM  237 (303)
T ss_dssp             EEECCCHHHHHCC---------------CCCTTCCHHHHHHH--HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH
T ss_pred             EEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccc--cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH
Confidence            99999999987643211  11122345799999999998531  247889999999999999999999999877766555


Q ss_pred             HHHhccCC--------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQEI--------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~~--------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ........        +.....+++++.++|.+||+.||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            44433211        1233578899999999999999999999999997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.3e-40  Score=347.81  Aligned_cols=260  Identities=13%  Similarity=0.098  Sum_probs=198.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCC--CcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeE-------
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDC--DEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICW-------  110 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~--~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~-------  110 (620)
                      .++|++.+.||+|+||.||+|++..+....  ..++.||||++.....     +..+.  .+++.++|+||++       
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~-----~~~E~--~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGR-----LFNEQ--NFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTST-----HHHHH--HHHHHHCCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccch-----HHHHH--HHHHHhcccchhhhhhhhcc
Confidence            589999999999999999999987652111  1246899999975421     11111  1333345666665       


Q ss_pred             --------eEEEEEE-CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          111 --------LQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       111 --------l~g~~~~-~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                              +++++.. +...||||||+.|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred             CCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence                    7888877 7889999999977888888754457899999999999999999999999999999999999999


Q ss_pred             cCC--cEEEeccCCcccccCCCC----CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          182 EAD--RAVLGDVGIPHLLLGIPL----PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       182 ~~~--~vkL~DFGla~~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      .++  .+||+|||+++.+.....    .........||+.|+|||++.+.   .++.++|||||||++|||++|..||..
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC---GPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            998  999999999987643211    11122445899999999998643   689999999999999999999999987


Q ss_pred             CC--HHHHHHHHHhc-cCCCCCC------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          256 RS--VDEIYDAVVRR-QEIPPIP------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       256 ~~--~~ei~~~i~~~-~~~~~~p------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..  ...+....... .....++      ..+++++.+||.+||+.||++||++.++++.|..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  333 (352)
T 2jii_A          271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA  333 (352)
T ss_dssp             GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence            53  33333333211 1122222      2579999999999999999999999999987766

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=336.00  Aligned_cols=252  Identities=20%  Similarity=0.268  Sum_probs=201.0

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ....++|++.+.||+|+||.||+|.+..++      +.||||+++.....  ..+..+.  .+++.++|+||+++++++.
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~--~~~~~e~--~~l~~l~h~~i~~~~~~~~   94 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETG------QIVAIKQVPVESDL--QEIIKEI--SIMQQCDSPHVVKYYGSYF   94 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTC------CEEEEEEEETTSCC--HHHHHHH--HHHHTCCCTTBCCEEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCC------CEEEEEecCchHHH--HHHHHHH--HHHHhCCCCCCccEEEEEE
Confidence            345678999999999999999999986655      48999999765422  2233332  2556679999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+.+|+||||++| +|.+.+. .....+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++.
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  173 (314)
T 3com_A           95 KNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG  173 (314)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eCCEEEEEeecCCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence            99999999999996 6666654 356789999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~  274 (620)
                      .....   ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+..... ....
T Consensus       174 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  247 (314)
T 3com_A          174 QLTDT---MAKRNTVIGTPFWMAPEVIQEI---GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRK  247 (314)
T ss_dssp             ECBTT---BSCBCCCCSCGGGCCHHHHSSS---CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS
T ss_pred             hhhhh---ccccCccCCCCCccChhhcCCC---CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCC
Confidence            76432   1223345799999999998643   688899999999999999999999998877666555543322 2233


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..++.++.++|.+||..||.+||++.++++
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            5668999999999999999999999999997

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.6e-40  Score=339.59  Aligned_cols=250  Identities=23%  Similarity=0.387  Sum_probs=195.3

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|+.++|++.+.||+|+||.||+|.+.        ++.||||++....  ....+..+.  ..++.++||||+++++++.
T Consensus         4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~--~~~~~~~E~--~~l~~l~hp~iv~~~~~~~   71 (307)
T 2eva_A            4 MIDYKEIEVEEVVGRGAFGVVCKAKWR--------AKDVAIKQIESES--ERKAFIVEL--RQLSRVNHPNIVKLYGACL   71 (307)
T ss_dssp             BCCGGGEEEEEEEECCSSSEEEEEEET--------TEEEEEEECSSTT--HHHHHHHHH--HHHHHCCCTTBCCEEEBCT
T ss_pred             cCCHhHeeeeeEeecCCCceEEEEEEC--------CeeEEEEEecChh--HHHHHHHHH--HHHhcCCCCCcCeEEEEEc
Confidence            477889999999999999999999864        2479999997543  223333333  2456679999999999875


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeecccCCcEEEccCCc-EEEec
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFNFILNEADR-AVLGD  190 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs---~gIiHrDLKP~NILld~~~~-vkL~D  190 (620)
                        +..|+||||++| +|.+.+..... ..++...++.++.||+.||+|||+   ++|+||||||+|||++.++. +||+|
T Consensus        72 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D  149 (307)
T 2eva_A           72 --NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD  149 (307)
T ss_dssp             --TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred             --CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence              458999999985 77776653221 247899999999999999999999   89999999999999998886 79999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRR  268 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~--~~ei~~~i~~~  268 (620)
                      ||+++....      ......||+.|+|||++.+.   .++.++||||||+++|||++|+.||....  ...+...+. .
T Consensus       150 fg~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~  219 (307)
T 2eva_A          150 FGTACDIQT------HMTNNKGSAAWMAPEVFEGS---NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-N  219 (307)
T ss_dssp             CCC------------------CCTTSSCHHHHTCC---CCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH-T
T ss_pred             ccccccccc------ccccCCCCCceEChhhhCCC---CCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh-c
Confidence            999876532      22345799999999998643   68899999999999999999999997643  333333333 3


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ...+..+..+++++.++|.+||+.||++||++.++++.|...
T Consensus       220 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  261 (307)
T 2eva_A          220 GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL  261 (307)
T ss_dssp             TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            345566788999999999999999999999999999988774

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=3e-40  Score=370.38  Aligned_cols=259  Identities=23%  Similarity=0.348  Sum_probs=215.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|..++|++.++||+|+||.||+|.+..+       ..||||+++..... ...+.++.  .+++.++|+||++++++
T Consensus       261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~vavK~~~~~~~~-~~~~~~E~--~~l~~l~hpniv~~~~~  330 (535)
T 2h8h_A          261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-------TRVAIKTLKPGTMS-PEAFLQEA--QVMKKLRHEKLVQLYAV  330 (535)
T ss_dssp             CSBCCGGGEEEEEEEEECSSEEEEEEEETTT-------EEEEEEEECTTSSC-HHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             ceecchhhhhhheecccCCCeEEEEEEECCC-------ceEEEEEeCCCCCC-HHHHHHHH--HHHHhCCCCCEeeEEEE
Confidence            3458889999999999999999999997543       36999999865533 23333333  35666789999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.. +.+||||||+. |+|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus       331 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  409 (535)
T 2h8h_A          331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL  409 (535)
T ss_dssp             ECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred             Eee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccccc
Confidence            865 67999999998 5888887654456799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........+|+.|+|||++..   +.++.++|||||||++|||++ |..||.+....+++..+.... ..
T Consensus       410 a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~  483 (535)
T 2h8h_A          410 ARLIEDNE--YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RM  483 (535)
T ss_dssp             TTTCCCHH--HHTTCSTTSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC-CC
T ss_pred             ceecCCCc--eecccCCcCcccccCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC
Confidence            98653211  011223457889999999864   368999999999999999999 999999999988888776543 44


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..+..+++++.+||.+||+.||++||++.+|++.|+..
T Consensus       484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            56789999999999999999999999999999998875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.5e-40  Score=344.57  Aligned_cols=270  Identities=19%  Similarity=0.276  Sum_probs=197.5

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ..+.++.++|++.+.||+|+||.||+|++.        ++.||||+++.....   .+..+.+...+..++|+||+++++
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~vavK~~~~~~~~---~~~~e~~~~~~~~~~h~~i~~~~~   74 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLD--------ERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIV   74 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEET--------TEEEEEEEEEGGGHH---HHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEEC--------CeEEEEEEeeccchh---hHHHHHHHHHHHhccCcchhhhee
Confidence            356688999999999999999999999752        357999999754332   222222212334579999999998


Q ss_pred             EEEE-----CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeecccCCcE
Q 007046          114 ISVI-----NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK---------GILVLNLKPFNF  178 (620)
Q Consensus       114 ~~~~-----~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~---------gIiHrDLKP~NI  178 (620)
                      .+..     ...+||||||++ |+|.+++..   ..+++..++.++.||+.||.|||+.         +|+||||||+||
T Consensus        75 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Ni  151 (336)
T 3g2f_A           75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV  151 (336)
T ss_dssp             EEEEECTTSCEEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGE
T ss_pred             cccccccCCCceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceE
Confidence            6653     236899999997 577777643   4558999999999999999999999         999999999999


Q ss_pred             EEccCCcEEEeccCCcccccCCCC-----CCCCCCCcCCCCCCCCcccccCCCC----CCCCchhhHHHHHHHHHHHHhC
Q 007046          179 ILNEADRAVLGDVGIPHLLLGIPL-----PSSDLPRRLGTPNYMAPEQWQPEVR----GPISFETDSWGFACSIIEMLTG  249 (620)
Q Consensus       179 Lld~~~~vkL~DFGla~~~~~~~~-----~~~~~~~~~GT~~YmAPE~~~~~~~----~~~s~~sDVwSlGvil~elltG  249 (620)
                      |++.++.+||+|||+++.+.....     .........||+.|+|||++.+...    ..++.++|||||||++|||++|
T Consensus       152 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  231 (336)
T 3g2f_A          152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR  231 (336)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc
Confidence            999999999999999987653221     1122335579999999999864211    2456789999999999999999


Q ss_pred             CCCCCC-CC-----------------HHHHHHHHHhccCCCCCCCC------CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          250 VQPRCG-RS-----------------VDEIYDAVVRRQEIPPIPSG------LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       250 ~~Pf~~-~~-----------------~~ei~~~i~~~~~~~~~p~~------~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..||.. ..                 ..+....+......+.++..      +++++.+||.+||+.||++|||+.++++
T Consensus       232 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             BGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            776532 11                 12222223333344555544      3458999999999999999999999999


Q ss_pred             HHHhCC-CCCCCC
Q 007046          306 VFKSDG-GWTGHG  317 (620)
Q Consensus       306 ~L~~~~-~~~~~~  317 (620)
                      .|.... .|....
T Consensus       312 ~L~~ll~~~~~~~  324 (336)
T 3g2f_A          312 RMAELMMIWERNK  324 (336)
T ss_dssp             HHHHHHHCCCC--
T ss_pred             HHHHHHHHHHhcc
Confidence            877743 344333

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=7.7e-40  Score=346.07  Aligned_cols=253  Identities=20%  Similarity=0.192  Sum_probs=192.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ...++|++.+.||+|+||.||+|++..++      +.||||++........ .+.....  .+..++||||+++++++..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~-~~~~~~~--~l~~l~h~niv~~~~~~~~   90 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTG------MSVAIKKVIQDPRFRN-RELQIMQ--DLAVLHHPNIVQLQSYFYT   90 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTC------CEEEEEEEECCTTCCC-HHHHHHH--HHHHHCCTTBCCEEEEEEE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEecCccccH-HHHHHHH--HHHhcCCCCcccHHHhhhc
Confidence            45578999999999999999999987665      4899999865432221 1122221  2344589999999999876


Q ss_pred             CC-------EEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeeecccCCcEEEcc-CCc
Q 007046          118 NG-------KICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLH--SKGILVLNLKPFNFILNE-ADR  185 (620)
Q Consensus       118 ~~-------~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLH--s~gIiHrDLKP~NILld~-~~~  185 (620)
                      .+       .+|+||||++|++.+.+...  ....+++..+..++.||+.||.|||  +.||+||||||+|||++. ++.
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             ECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTE
T ss_pred             cccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCc
Confidence            33       38999999999887766532  4567899999999999999999999  999999999999999997 899


Q ss_pred             EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 007046          186 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  265 (620)
Q Consensus       186 vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i  265 (620)
                      +||+|||+++....    ........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus       171 ~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  244 (360)
T 3e3p_A          171 LKLCDFGSAKKLSP----SEPNVAYICSRYYRAPELIFGN--QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI  244 (360)
T ss_dssp             EEECCCTTCBCCCT----TSCCCSTTSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EEEeeCCCceecCC----CCCcccccCCcceeCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHH
Confidence            99999999987643    2233456789999999998532  24889999999999999999999999998888777766


Q ss_pred             HhccCCC------------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          266 VRRQEIP------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       266 ~~~~~~~------------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......+                              ..+...++++.+||.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            5422111                              122336789999999999999999999999997

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.9e-39  Score=359.55  Aligned_cols=257  Identities=21%  Similarity=0.313  Sum_probs=206.1

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||+|+||.||+|++..++      +.||||++........  + ..+..++..+.++++|+.+..++...+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~~~--~-~~E~~il~~L~~~~~i~~i~~~~~~~~   76 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTN------EEVAIKLENVKTKHPQ--L-LYESKIYRILQGGTGIPNVRWFGVEGD   76 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTC------CEEEEEEEETTCSSCC--H-HHHHHHHHHTTTSTTCCCEEEEEEETT
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCC------cEEEEEEeccccccHH--H-HHHHHHHHHhcCCCCCCeEEEEEeeCC
Confidence            478999999999999999999976655      4899999875443221  2 223334555556678888888888999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE---ccCCcEEEeccCCccc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl---d~~~~vkL~DFGla~~  196 (620)
                      ..||||||+.++|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+||||   +.++.+||+|||+++.
T Consensus        77 ~~~lvme~~g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           77 YNVLVMDLLGPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             EEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             EEEEEEECCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            9999999998888888864 45689999999999999999999999999999999999999   6889999999999987


Q ss_pred             ccCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcc
Q 007046          197 LLGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQ  269 (620)
Q Consensus       197 ~~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~---~ei~~~i~~~~  269 (620)
                      +......    ........||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+...   .+.+..+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~  232 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK  232 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred             ccCCccccccccccccccCCCccccCHHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence            7543221    1222356899999999999754   689999999999999999999999987543   34444443332


Q ss_pred             CC---CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          270 EI---PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       270 ~~---~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..   ..++..+++++.+||.+||+.||++||++.+|++.|+.
T Consensus       233 ~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            21   12336789999999999999999999999999886665

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.8e-41  Score=349.58  Aligned_cols=259  Identities=19%  Similarity=0.256  Sum_probs=201.8

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..++|++.+.||+|+||.||+|++. +      ++.||||++..........+..+.  .+++.++||||+++++++...
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~------~~~vavK~~~~~~~~~~~~~~~E~--~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR-D------GAKVALKRRTPESSQGIEEFETEI--ETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT-T------CCEEEEEECCSCCSSHHHHHHHHH--HGGGSCCCTTBCCEEEECCCT
T ss_pred             HHhccCccceeecCCCeeEEEEEEC-C------CCEEEEEEecccChHHHHHHHHHH--HHHHhCCCCCEeeEEEEEcCC
Confidence            4578999999999999999999853 2      357999999876655444444433  256677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +..|+||||++ |+|.+.+....  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999998 46666654322  2358999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhcc
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA------VVRRQ  269 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~------i~~~~  269 (620)
                      ...... .........||+.|+|||++.+.   .++.++||||||+++|||++|+.||.+....+....      .....
T Consensus       188 ~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~  263 (321)
T 2qkw_B          188 KGTELD-QTHLSTVVKGTLGYIDPEYFIKG---RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG  263 (321)
T ss_dssp             ECSSSS-CCCCBCCCEEETTTCCHHHHHHC---BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred             cccccc-ccccccccCCCccccCHHHhcCC---CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence            653221 11222345699999999998643   688999999999999999999999976543221111      11110


Q ss_pred             ---------CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          270 ---------EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       270 ---------~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                               ....++..++.++.+++.+||+.||++||++.++++.|+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                     01112334567799999999999999999999999988764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=344.63  Aligned_cols=249  Identities=22%  Similarity=0.274  Sum_probs=198.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      --+++|++.+.||+|+||.||+|.+..++      +.||||++........ .....++. .+++.++||||+++++++.
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~   93 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSG------EKVAIKKLSRPFQSEIFAKRAYREL-LLLKHMQHENVIGLLDVFT   93 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEESSTTSSHHHHHHHHHHH-HHHHHCCCTTBCCCSEEEC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCC------CEEEEEEecccccchHHHHHHHHHH-HHHHhcCCCCcccHhheEe
Confidence            33578999999999999999999986655      5899999976443222 22222222 3556678999999999998


Q ss_pred             ECCE------EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          117 INGK------ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ~~~~------~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ..+.      +|+||||++|+|.+.+    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~D  169 (353)
T 3coi_A           94 PASSLRNFYDFYLVMPFMQTDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILD  169 (353)
T ss_dssp             SCSSGGGCCCCEEEEECCSEEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECS
T ss_pred             cccccccceeEEEEeccccCCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEee
Confidence            7643      5999999998776655    24599999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++....      ......||+.|+|||.+.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+..+.....
T Consensus       170 fg~~~~~~~------~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  241 (353)
T 3coi_A          170 FGLARHADA------EMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG  241 (353)
T ss_dssp             TTCTTC--------------CCSBCCSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHC
T ss_pred             cccccCCCC------CccccccCcCcCCHHHHhCc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            999976522      23456799999999998642  3588899999999999999999999999887766665543211


Q ss_pred             -----------------------------CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 -----------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 -----------------------------~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                   .......+++++.+||.+||+.||++||++.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             BCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                                         11233578999999999999999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.5e-39  Score=333.74  Aligned_cols=247  Identities=21%  Similarity=0.333  Sum_probs=205.5

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||++.....  .....+..+.  .+++.++||||+++++++...
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~------~~valK~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQ------QEYAVKVINKASAKNKDTSTILREV--ELLKKLDHPNIMKLFEILEDS   93 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGBSSSCHHHHHHHH--HHHHTCCCTTBCCEEEEEECS
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCC------cEEEEEEecccccchHHHHHHHHHH--HHHHhccCCCccEEEEEEeCC
Confidence            57999999999999999999976554      4899999975432  2223333333  245667999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEEeccCCc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIP  194 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL~DFGla  194 (620)
                      +..|+||||++ ++|.+.+..  ...+++..++.++.||+.||.|||++|++||||||+||+++.+   +.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             CeEEEEEEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            99999999998 567677653  3579999999999999999999999999999999999999764   46999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      +....    ........||+.|+|||.+.+    .++.++|+||||+++|+|++|..||.+.+..++...+.........
T Consensus       172 ~~~~~----~~~~~~~~~~~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T 2wei_A          172 TCFQQ----NTKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL  243 (287)
T ss_dssp             GTBCC----CSSCSCHHHHHTTCCHHHHTT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS
T ss_pred             eeecC----CCccccccCcccccChHHhcC----CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence            86632    122334568999999999853    4888999999999999999999999999988888888766544433


Q ss_pred             C--CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 P--SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p--~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +  ..+++++.++|.+||..||++||++.++++
T Consensus       244 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            3  578999999999999999999999999998

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.3e-39  Score=328.94  Aligned_cols=245  Identities=21%  Similarity=0.264  Sum_probs=200.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE---
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI---  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~---  117 (620)
                      ++|++.+.||+|+||.||+|.+..++      +.||+|+++......    .. +. .+++.++||||+++++++..   
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~----~~-e~-~~l~~l~h~~i~~~~~~~~~~~~   78 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDG------KTYVIKRVKYNNEKA----ER-EV-KALAKLDHVNIVHYNGCWDGFDY   78 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTC------CEEEEEEEECCSGGG----HH-HH-HHHHHCCCTTBCCEEEEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCCC------eEEEEEEeccccHHH----HH-HH-HHHHhCCCCCEEEEeeeEecccc
Confidence            46999999999999999999986554      489999997654321    12 22 24556689999999998864   


Q ss_pred             -------------CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC
Q 007046          118 -------------NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       118 -------------~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~  183 (620)
                                   ...+|+||||++| +|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             C---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             CcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC
Confidence                         3458999999995 88888876556789999999999999999999999999999999999999999


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      +.+||+|||+++.....    .......||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||..  ......
T Consensus       159 ~~~kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~~  229 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKND----GKRTRSKGTLRYMSPEQISSQ---DYGKEVDLYALGLILAELLHVCDTAFE--TSKFFT  229 (284)
T ss_dssp             TEEEECCCTTCEESSCC----SCCCCCCSCCTTSCHHHHHCS---CCCTHHHHHHHHHHHHHHHSCCSSHHH--HHHHHH
T ss_pred             CCEEECcchhheecccc----ccccccCCcccccChhhhccC---CCcchhhhHHHHHHHHHHHhcCCcchh--HHHHHH
Confidence            99999999999876432    223445799999999998643   688999999999999999999988742  222333


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+.    ...++..++.++.++|.+||..||.+||++.++++.|...
T Consensus       230 ~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          230 DLR----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             HHH----TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             Hhh----cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            332    2335677899999999999999999999999999987764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.2e-39  Score=332.38  Aligned_cols=255  Identities=25%  Similarity=0.306  Sum_probs=200.1

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ..++|.....||+|+||.||+|.+..++      +.||||.++.........+.++.  .+++.++|+||+++++++...
T Consensus        20 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~~~~~~~   91 (295)
T 2clq_A           20 EYDENGDRVVLGKGTYGIVYAGRDLSNQ------VRIAIKEIPERDSRYSQPLHEEI--ALHKHLKHKNIVQYLGSFSEN   91 (295)
T ss_dssp             CBCTTSSBCEEEECSSSEEEEEEETTTC------CEEEEEEEECCCC---HHHHHHH--HHHHTCCCTTBCCEEEEEEET
T ss_pred             cccCCCCcEEEeecCcEEEEEEEECCCC------eEEEEEEccCCchHHHHHHHHHH--HHHHhCCCCCEeeEeeEEEeC
Confidence            3344555568999999999999986655      48999999866543333333333  356677999999999999999


Q ss_pred             CEEEEEEecCC-CChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-CCcEEEeccCCcc
Q 007046          119 GKICIIMKFYE-GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPH  195 (620)
Q Consensus       119 ~~~~IVmE~~~-GsLld~l~~~~~-~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-~~~vkL~DFGla~  195 (620)
                      +..++||||++ ++|.+.+..... ..+++..+..++.||+.||.|||+++|+|+||||+|||++. ++.+||+|||+++
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~  171 (295)
T 2clq_A           92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK  171 (295)
T ss_dssp             TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred             CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccccc
Confidence            99999999998 566666654322 35678999999999999999999999999999999999997 8999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~~~~~~~  274 (620)
                      .....   ........||+.|+|||.+.+. ...++.++|+||||+++|+|++|..||..... .............+.+
T Consensus       172 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (295)
T 2clq_A          172 RLAGI---NPCTETFTGTLQYMAPEIIDKG-PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI  247 (295)
T ss_dssp             ESCC--------CCCCCCGGGCCHHHHHHG-GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCC
T ss_pred             ccCCC---CCcccccCCCccccChhhhcCC-CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccc
Confidence            76432   1223445799999999998643 12378899999999999999999999976433 2223333333455667


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+++++.++|.+||+.||++||++.++++
T Consensus       248 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          248 PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            8899999999999999999999999999987

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=347.95  Aligned_cols=240  Identities=18%  Similarity=0.200  Sum_probs=197.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--------HHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--------~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++.....        ....+..+.  .+++.++||||++++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~Iv~~~   95 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKN------KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI--AILSRVEHANIIKVL   95 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTT------EEEEEEEEESTTSCTTSEEEETTTEEEEHHH--HHHTTCCCTTBCCEE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCC------cEEEEEEEehhhcccccccchHHHHHHHHHH--HHHHhCCCCCEeeEE
Confidence            57999999999999999999976665      48999999765321        111112222  355667999999999


Q ss_pred             EEEEECCEEEEEEecCC-C-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          113 GISVINGKICIIMKFYE-G-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      +++...+.+++||||+. | ++.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  173 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID  173 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEee
Confidence            99999999999999996 4 6666664  456799999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||+++....    .......+||+.|+|||++.+.   .+ +.++|||||||++|+|++|..||.....      .  ..
T Consensus       174 fg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~--~~  238 (335)
T 3dls_A          174 FGSAAYLER----GKLFYTFCGTIEYCAPEVLMGN---PYRGPELEMWSLGVTLYTLVFEENPFCELEE------T--VE  238 (335)
T ss_dssp             CTTCEECCT----TCCBCEECSCGGGCCHHHHTTC---CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G--TT
T ss_pred             cccceECCC----CCceeccCCCccccChhhhcCC---CCCCCcccchhHHHHHHHHHhCCCchhhHHH------H--Hh
Confidence            999987643    2233456799999999998643   34 7899999999999999999999975321      1  11


Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .....+..+++++.+||.+||+.||++||++.++++
T Consensus       239 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          239 AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            223456679999999999999999999999999998

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-39  Score=340.37  Aligned_cols=257  Identities=18%  Similarity=0.305  Sum_probs=194.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~-  118 (620)
                      .++|++.+.||+|+||.||+|++.        ++.||||++......   ....+.+.......+|+||+++++++... 
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~~---~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--------GEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--------TEEEEEEEEEGGGHH---HHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--------CceEEEEEEeccccc---hhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            368999999999999999999864        357999999644322   22222221223335899999999999987 


Q ss_pred             ---CEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeecccCCcEEEccCCcE
Q 007046          119 ---GKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       119 ---~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~--------gIiHrDLKP~NILld~~~~v  186 (620)
                         ...|+||||++| +|.+++.   ...+++..++.++.|++.||.|||++        +|+||||||+|||++.++.+
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  181 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC  181 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred             CCCCceEEEEeccCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence               789999999985 7777774   34799999999999999999999999        99999999999999999999


Q ss_pred             EEeccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCC---CchhhHHHHHHHHHHHHhC----------CCC
Q 007046          187 VLGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPI---SFETDSWGFACSIIEMLTG----------VQP  252 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~---s~~sDVwSlGvil~elltG----------~~P  252 (620)
                      ||+|||+++.+...... ........||+.|+|||++.+......   +.++|||||||++|||+||          ..|
T Consensus       182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p  261 (337)
T 3mdy_A          182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP  261 (337)
T ss_dssp             EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence            99999999776432211 111235689999999999875421111   1248999999999999999          777


Q ss_pred             CCCCC-----HHHHHHHHHhccCCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          253 RCGRS-----VDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       253 f~~~~-----~~ei~~~i~~~~~~~~~p~-----~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      |....     .......+......+.++.     .+++++.+||.+||+.||++||++.++++.|+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence            76432     2233333333333444443     5677899999999999999999999999988764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.6e-39  Score=343.24  Aligned_cols=253  Identities=19%  Similarity=0.268  Sum_probs=195.4

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHH----------ccCC
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK----------CQGV  105 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~----------~~~h  105 (620)
                      ..+..++|++.+.||+|+||.||+|++..++      +.||||+++...... ..+..+ ..++..          ...|
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~~~-~~~~~e-~~~l~~l~~~~~~~~~~~~~   85 (373)
T 1q8y_A           14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNN------THVAMKIVRGDKVYT-EAAEDE-IKLLQRVNDADNTKEDSMGA   85 (373)
T ss_dssp             CEETTTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCHHHH-HHHHHH-HHHHHHHHHTCCSHHHHHHH
T ss_pred             CcccCCeEEEEEeeeecCCeEEEEEEecCCC------cEEEEEEecCCccch-hhhhHH-HHHHHHhhcccccchhcccc
Confidence            3456789999999999999999999976554      589999997543221 222222 212222          2248


Q ss_pred             CceeEeEEEEEECC----EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeecccCCcEEE
Q 007046          106 EGICWLQGISVING----KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFIL  180 (620)
Q Consensus       106 ~nIv~l~g~~~~~~----~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~-gIiHrDLKP~NILl  180 (620)
                      +||+++++++...+    .+++||||+.++|.+.+.......+++..+..++.||+.||+|||++ ||+||||||+|||+
T Consensus        86 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll  165 (373)
T 1q8y_A           86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM  165 (373)
T ss_dssp             TTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred             chHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEE
Confidence            99999999988654    79999999988999988876667799999999999999999999998 99999999999999


Q ss_pred             cc------CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 007046          181 NE------ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC  254 (620)
Q Consensus       181 d~------~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~  254 (620)
                      +.      .+.+||+|||+++....      ......||+.|+|||++.+.   .++.++|||||||++|||++|..||.
T Consensus       166 ~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~  236 (373)
T 1q8y_A          166 EIVDSPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLGA---PWGCGADIWSTACLIFELITGDFLFE  236 (373)
T ss_dssp             EEEETTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHTC---CCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             eccCCCcCcceEEEcccccccccCC------CCCCCCCCccccCcHHHhCC---CCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            54      34799999999987632      23445899999999999754   68899999999999999999999998


Q ss_pred             CCC------HHHHHHHHHhccC----------------------------------------CCCCCCCCCHHHHHHHHH
Q 007046          255 GRS------VDEIYDAVVRRQE----------------------------------------IPPIPSGLPPAVENVLLG  288 (620)
Q Consensus       255 ~~~------~~ei~~~i~~~~~----------------------------------------~~~~p~~~s~~l~~Li~~  288 (620)
                      +.+      ..+.+..+.....                                        ...++..+++++.+||.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  316 (373)
T 1q8y_A          237 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP  316 (373)
T ss_dssp             --------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGG
T ss_pred             CCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHH
Confidence            654      2222222221100                                        112334567889999999


Q ss_pred             hhhcCcCCCCCHHHHHH
Q 007046          289 CFEYDLRSRPLMTDILR  305 (620)
Q Consensus       289 cL~~dP~~RPs~~eil~  305 (620)
                      ||+.||++||++.++++
T Consensus       317 ~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          317 MLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             GGCSSTTTCBCHHHHHT
T ss_pred             HhccCccccCCHHHHhh
Confidence            99999999999999998

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3e-41  Score=361.15  Aligned_cols=248  Identities=13%  Similarity=0.136  Sum_probs=189.1

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc---hhHHHHHHHHHHH-HHHHccCCCceeEeE--
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLND-LFLKCQGVEGICWLQ--  112 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~-~~l~~~~h~nIv~l~--  112 (620)
                      ..++|++.+.||+|+||.||+|++..++      +.||||+++...   ......+..+... ..++.++||||++++  
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~  144 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETG------ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR  144 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCC------CEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHC
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCC------cEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhh
Confidence            3578999999999999999999976554      489999997432   2222333333211 134445899999988  


Q ss_pred             -----EEEEECCE-----------------EEEEEecCCCChHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH
Q 007046          113 -----GISVINGK-----------------ICIIMKFYEGSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHS  165 (620)
Q Consensus       113 -----g~~~~~~~-----------------~~IVmE~~~GsLld~l~~~~~-----~~l~~~~~~~i~~qIa~gL~yLHs  165 (620)
                           +++...+.                 .||||||++|+|.+++.....     ..+++..++.++.||+.||+|||+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             BCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence                 77665432                 899999999999998875321     123347888899999999999999


Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC--------CCCCCCchhhHH
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSW  237 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~~~~s~~sDVw  237 (620)
                      +||+||||||+|||++.++.+||+|||+++...      ......+| +.|+|||++.+.        ....++.++|||
T Consensus       225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw  297 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW  297 (377)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETT------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEechhheecC------CcccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence            999999999999999999999999999998642      22345578 999999998643        001588999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          238 GFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       238 SlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ||||++|||++|+.||.+.+..+....+.      ..+..+++++.+||.+||+.||++||++.++++
T Consensus       298 SlG~il~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          298 ALGLVIYWIWCADLPITKDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHHHHHSSCCC------CCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCcccccccchhhhh------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999999999999998765544333221      124678999999999999999999999999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.7e-40  Score=344.85  Aligned_cols=264  Identities=19%  Similarity=0.275  Sum_probs=208.0

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ...|..++|++.+.||+|+||.||+|.+..         .||+|+++......  ...+.++.  .+++.++|+||++++
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---------~~avk~~~~~~~~~~~~~~~~~e~--~~l~~l~h~~iv~~~   95 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG---------EVAIRLIDIERDNEDQLKAFKREV--MAYRQTRHENVVLFM   95 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS---------SEEEEECCCCSCCCCCCCCCCTTG--GGGTTCCCTTBCCCC
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC---------eEEEEEeecCCCCHHHHHHHHHHH--HHHhcCCCCCEeEEE
Confidence            445889999999999999999999998642         39999997543211  11111222  245667899999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++...+..++||||++| +|.+.+. .....+++..++.++.||+.||+|||+++|+||||||+|||++ ++.+||+||
T Consensus        96 ~~~~~~~~~~iv~e~~~~~~L~~~l~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Df  173 (319)
T 2y4i_B           96 GACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDF  173 (319)
T ss_dssp             EEEECSSCEEEECBCCCSEEHHHHTT-SSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCC
T ss_pred             EEEecCCceEEEeecccCCcHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeec
Confidence            999999999999999985 5555553 2445799999999999999999999999999999999999998 789999999


Q ss_pred             CCcccccCCCC--CCCCCCCcCCCCCCCCcccccCCC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          192 GIPHLLLGIPL--PSSDLPRRLGTPNYMAPEQWQPEV------RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       192 Gla~~~~~~~~--~~~~~~~~~GT~~YmAPE~~~~~~------~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      |+++.......  .........||+.|+|||.+.+..      ...++.++||||||+++|+|++|..||......++..
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  253 (319)
T 2y4i_B          174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW  253 (319)
T ss_dssp             SCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH
T ss_pred             CCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99876532111  122233456999999999986421      2357899999999999999999999999999888887


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .+.........+..++.++.++|.+||..||++||++.++++.|+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          254 QMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             HHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             HhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            776665544445578999999999999999999999999999888753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.4e-39  Score=335.26  Aligned_cols=260  Identities=20%  Similarity=0.248  Sum_probs=201.7

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccC-CCceeEeE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQG-VEGICWLQ  112 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~-h~nIv~l~  112 (620)
                      ...+..++|++.+.||+|+||.||+|.+..       ++.||||++...... .......++...+.++.+ |+||++++
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEK-------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEECTT-------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             eeeeccceEEEEEEecCCCCEEEEEEEcCC-------CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            455777889999999999999999998632       357999999764432 222222333334444443 79999999


Q ss_pred             EEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          113 GISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +++...+..|+|||+..++|.+.+..  ...+++..+..++.||+.||.|||+++|+||||||+|||++ ++.+||+|||
T Consensus        95 ~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg  171 (313)
T 3cek_A           95 DYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFG  171 (313)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred             EEeecCCEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecc
Confidence            99999999999999777888888864  46789999999999999999999999999999999999996 5899999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCC--------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHH
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYD  263 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~--------~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~-~~ei~~  263 (620)
                      +++...... .........||+.|+|||.+.+.        ....++.++||||||+++|+|++|..||.... ....+.
T Consensus       172 ~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (313)
T 3cek_A          172 IANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH  250 (313)
T ss_dssp             SSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred             ccccccCcc-ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence            998763321 11122345799999999998641        12368889999999999999999999998654 334445


Q ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+........++..++.++.++|.+||+.||++||++.++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            555555555677888999999999999999999999999997

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=349.45  Aligned_cols=254  Identities=20%  Similarity=0.246  Sum_probs=182.3

Q ss_pred             CeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--C
Q 007046           42 ALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--N  118 (620)
Q Consensus        42 ~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--~  118 (620)
                      .|++. ++||+|+||.||+|+++.+.    .++.||||++.......  .+..+.  .+++.++||||+++++++..  .
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~----~~~~vaiK~~~~~~~~~--~~~~E~--~~l~~l~hpniv~~~~~~~~~~~   92 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGK----DDKDYALKQIEGTGISM--SACREI--ALLRELKHPNVISLQKVFLSHAD   92 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSS----CCCCEEEEECSSSSCCH--HHHHHH--HHHHHCCCTTBCCCCEEEEETTT
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCC----CCeEEEEEEECCCCCCH--HHHHHH--HHHHhcCCCCeeeEeeEEecCCC
Confidence            46663 47999999999999976332    23579999997654322  222222  35566789999999999965  6


Q ss_pred             CEEEEEEecCCCChHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE----ccCCcEE
Q 007046          119 GKICIIMKFYEGSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAV  187 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~-------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl----d~~~~vk  187 (620)
                      ..+||||||++|+|.+.+....       ...+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+|
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~k  172 (405)
T 3rgf_A           93 RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  172 (405)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred             CeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence            7899999999999988876432       1359999999999999999999999999999999999999    6778999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------  259 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~--------  259 (620)
                      |+|||+++.+.............+||+.|+|||++.+.  ..++.++|||||||++|+|++|.+||.+....        
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~  250 (405)
T 3rgf_A          173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH  250 (405)
T ss_dssp             ECCTTCCC----------------CCCTTCCHHHHTTC--CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred             EEECCCceecCCCCcccccCCCceecCcccCchhhcCC--CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence            99999998764322222334556899999999998642  24889999999999999999999999765432        


Q ss_pred             -HHHHHHHhccCCCCC------------------------------------CCCCCHHHHHHHHHhhhcCcCCCCCHHH
Q 007046          260 -EIYDAVVRRQEIPPI------------------------------------PSGLPPAVENVLLGCFEYDLRSRPLMTD  302 (620)
Q Consensus       260 -ei~~~i~~~~~~~~~------------------------------------p~~~s~~l~~Li~~cL~~dP~~RPs~~e  302 (620)
                       +.+..+......+..                                    ....++++.+||.+||..||.+|||+.|
T Consensus       251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e  330 (405)
T 3rgf_A          251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ  330 (405)
T ss_dssp             HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence             333333322211110                                    1123678999999999999999999999


Q ss_pred             HHH
Q 007046          303 ILR  305 (620)
Q Consensus       303 il~  305 (620)
                      +++
T Consensus       331 ~L~  333 (405)
T 3rgf_A          331 AMQ  333 (405)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            998

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.5e-39  Score=344.69  Aligned_cols=250  Identities=17%  Similarity=0.237  Sum_probs=194.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-----------HHHHHHHHHHHHHHHccCCCce
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-----------RMRVLLERLNDLFLKCQGVEGI  108 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-----------~~~~~~~~~~~~~l~~~~h~nI  108 (620)
                      .++|++.+.||+|+||.||+|.+..       +..||||++......           ....+..+.  .+++.++||||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~--~~l~~l~h~~i   91 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSE-------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI--RLLNHFHHPNI   91 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTT-------SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHH--HHHHHCCCTTB
T ss_pred             ccceEEeEEeccCCCEEEEEEECCC-------CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHH--HHHHhCCCcCc
Confidence            5789999999999999999998643       358999998653221           112222222  25566789999


Q ss_pred             eEeEEEEEE-----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC
Q 007046          109 CWLQGISVI-----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA  183 (620)
Q Consensus       109 v~l~g~~~~-----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~  183 (620)
                      +++++++..     ...+|+||||++|++.+.+.. ....+++..+..++.||+.||.|||+++|+||||||+|||++.+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  170 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN  170 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC
Confidence            999999865     237899999999999988874 44579999999999999999999999999999999999999999


Q ss_pred             CcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 007046          184 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD  263 (620)
Q Consensus       184 ~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~  263 (620)
                      +.+||+|||+++....    ........||+.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+.
T Consensus       171 ~~~kl~Dfg~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          171 NDITICDFNLAREDTA----DANKTHYVTHRWYRAPELVMQF--KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             CCEEECCTTC-------------------CGGGCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCEEEEecCccccccc----ccccceecccceecCcHHhcCC--CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            9999999999975432    2233446799999999998642  358899999999999999999999999988777776


Q ss_pred             HHHhccCCCC------------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          264 AVVRRQEIPP------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       264 ~i~~~~~~~~------------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+......+.                              .+..+++.+.+||.+||+.||++||++.++++
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            6654222111                              12456899999999999999999999999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.9e-40  Score=353.96  Aligned_cols=252  Identities=16%  Similarity=0.111  Sum_probs=182.7

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHH--HHHHccCCCceeEeE--
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLND--LFLKCQGVEGICWLQ--  112 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~--~~l~~~~h~nIv~l~--  112 (620)
                      ...+|++.+.||+|+||.||+|++..++      +.||||+++.....  .....+.++..  ..++. +||||++++  
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~  132 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVERL------EDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRR  132 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------C
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECCCC------ceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhcee
Confidence            3456999999999999999999986655      58999999875532  22222222221  13444 799977755  


Q ss_pred             -----EEEEEC-----------------CEEEEEEecCCCChHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHHH
Q 007046          113 -----GISVIN-----------------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNV------FRYAIDLAQGILQLH  164 (620)
Q Consensus       113 -----g~~~~~-----------------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~------~~i~~qIa~gL~yLH  164 (620)
                           +++...                 ..+||||||++|+|.+++... +..+++..+      ..++.||+.||+|||
T Consensus       133 ~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH  211 (371)
T 3q60_A          133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQ  211 (371)
T ss_dssp             BCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence                 555443                 348999999999999988753 233455555      677799999999999


Q ss_pred             HCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHH
Q 007046          165 SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII  244 (620)
Q Consensus       165 s~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~  244 (620)
                      +++|+||||||+|||++.++.+||+|||+++....      ......||+.|+|||++.+. ...++.++|||||||++|
T Consensus       212 ~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DiwSlG~il~  284 (371)
T 3q60_A          212 SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT------RGPASSVPVTYAPREFLNAS-TATFTHALNAWQLGLSIY  284 (371)
T ss_dssp             HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTC------EEEGGGSCGGGCCHHHHTCS-EEECCHHHHHHHHHHHHH
T ss_pred             HCCCccCcCCHHHEEECCCCCEEEEecceeeecCC------CccCccCCcCCcChhhccCC-CCCcCccccHHHHHHHHH
Confidence            99999999999999999999999999999986521      11245677999999999641 136899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHH--HHH---HH--hccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          245 EMLTGVQPRCGRSVDEI--YDA---VV--RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       245 elltG~~Pf~~~~~~ei--~~~---i~--~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ||++|+.||.+......  +..   ..  ......+.+..+++++.+||.+||+.||++||++.++++
T Consensus       285 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          285 RVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99999999987643211  000   00  011112223588999999999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2.8e-39  Score=340.77  Aligned_cols=248  Identities=21%  Similarity=0.240  Sum_probs=174.9

Q ss_pred             cCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .-.++|++.+ .||+|+||.||+|.+..++      +.||||++......     ..+ ....++..+|+||+++++++.
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~-----~~e-~~~~~~~~~h~~i~~~~~~~~   92 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTG------QKCALKLLYDSPKA-----RQE-VDHHWQASGGPHIVCILDVYE   92 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEESSHHH-----HHH-HHHHHHHTTSTTBCCEEEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCC------CEEEEEEecCcHHH-----HHH-HHHHHHhcCCCChHHHHHHHh
Confidence            3457899966 5999999999999987665      48999999753211     111 223456679999999999987


Q ss_pred             E----CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC---CcEEE
Q 007046          117 I----NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVL  188 (620)
Q Consensus       117 ~----~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~---~~vkL  188 (620)
                      .    ...+||||||++| +|.+.+.......+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||
T Consensus        93 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl  172 (336)
T 3fhr_A           93 NMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKL  172 (336)
T ss_dssp             EEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEE
T ss_pred             hccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEE
Confidence            6    4568999999985 78788765444679999999999999999999999999999999999999864   55999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----H
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD----A  264 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~----~  264 (620)
                      +|||+++....     .......||+.|+|||++.+.   .++.++|+||||+++|+|++|..||.......+..    .
T Consensus       173 ~Dfg~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  244 (336)
T 3fhr_A          173 TDFGFAKETTQ-----NALQTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR  244 (336)
T ss_dssp             CCCTTCEEC---------------------------C---HHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred             eccccceeccc-----cccccCCCCcCccChhhhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh
Confidence            99999986532     233456789999999998533   67889999999999999999999998765544322    1


Q ss_pred             HHhccC--CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQE--IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~~--~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.....  .......+++++.+||.+||+.||++||++.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            211111  12223578999999999999999999999999998

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=345.74  Aligned_cols=260  Identities=16%  Similarity=0.177  Sum_probs=195.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|++..+. +...++.||||+++...............  .+....|+||+.+++++.
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~e~~~~~--~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLN-DAKNKQKFVLKVQKPANPWEFYIGTQLME--RLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC--------CCCCEEEEEESSCCHHHHHHHHHHHH--HSCGGGGGGBCCEEEEEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCc-ccccCcEEEEEEeCCCChhHHHHHHHHHH--Hhhhhhhhhhhhhheeee
Confidence            366788999999999999999999754322 23455689999998765433222222111  122334899999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc----------
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----------  182 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~---~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~----------  182 (620)
                      ..+..|||||||+ |+|.+++...   ....+++..++.++.||+.||+|||+++|+||||||+|||++.          
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence            9999999999998 6777777643   2467999999999999999999999999999999999999998          


Q ss_pred             -CCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 007046          183 -ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI  261 (620)
Q Consensus       183 -~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei  261 (620)
                       ++.+||+|||+++.+.... ........+||+.|||||++.+.   .++.++|||||||++|||+||+.||........
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  293 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFP-KGTIFTAKCETSGFQCVEMLSNK---PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC  293 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSC-TTEEECCSSCTTSCCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred             ccCCEEEeeCchhhhhhccC-CCceeeeecCCCCCCChHHhcCC---CCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence             8999999999997653211 12234556899999999999754   589999999999999999999999864332110


Q ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHh
Q 007046          262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP-LMTDILRVFKS  309 (620)
Q Consensus       262 ~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RP-s~~eil~~L~~  309 (620)
                            ...........++.+.+++..||+.+|.+|+ ++.++.+.|+.
T Consensus       294 ------~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          294 ------KPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             ------EECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             ------eechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence                  0000001123477899999999999999995 67777665554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.2e-39  Score=340.34  Aligned_cols=251  Identities=21%  Similarity=0.285  Sum_probs=195.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-------HHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-------RMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-------~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++.....       .....+.++. .+++.++||||+++++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~   82 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTC------KKVAIKIISKRKFAIGSAREADPALNVETEI-EILKKLNHPCIIKIKN   82 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECC---------------CHHHHH-HHHHHCCCTTBCCEEE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCC------cEEEEEEeehhhhhhcccccchhhhhHHHHH-HHHHhCCCCCCceEee
Confidence            57999999999999999999986655      48999999754321       1111122222 2556679999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc---EEEe
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLG  189 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~---vkL~  189 (620)
                      ++..++ .|+||||++| +|.+.+.  ....+++..+..++.||+.||.|||+++|+||||||+|||++.++.   +||+
T Consensus        83 ~~~~~~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           83 FFDAED-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             EEESSS-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             EEcCCc-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence            987655 8999999985 7777664  4568999999999999999999999999999999999999987664   9999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~  268 (620)
                      |||+++....    ........||+.|+|||++.+.....++.++|+|||||++|+|++|..||...... .+...+...
T Consensus       160 Dfg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  235 (322)
T 2ycf_A          160 DFGHSKILGE----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG  235 (322)
T ss_dssp             CCTTCEECCC----CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT
T ss_pred             cCccceeccc----ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC
Confidence            9999987532    11122357999999999975322446889999999999999999999999765433 334444333


Q ss_pred             cCC--CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~--~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...  +..+..+++++.+||.+||..||++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            221  1223578999999999999999999999999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6.6e-39  Score=367.88  Aligned_cols=263  Identities=22%  Similarity=0.363  Sum_probs=213.1

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...+..++|++.+.||+|+||.||+|.+..++.   .+..||||.++............++. .+++.++||||++++++
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~HpnIv~l~~~  459 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PAMAVAIKTCKNCTSDSVREKFLQEA-LTMRQFDHPHIVKLIGV  459 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSS---CCEEEEEEECSSTTCHHHHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCC---ccEEEEEEEecccCCHHHHHHHHHHH-HHHHhCCCCCCCeEEEE
Confidence            345777899999999999999999999875442   34689999997655444333333333 35566799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +. ++..||||||++ |+|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus       460 ~~-~~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~  537 (656)
T 2j0j_A          460 IT-ENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL  537 (656)
T ss_dssp             EC-SSSCEEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred             Ee-cCceEEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCC
Confidence            84 566899999999 566666653 456799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++......  ........||+.|||||++.+.   .++.++|||||||++|||++ |..||.+.+..++...+.... .+
T Consensus       538 a~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~-~~  611 (656)
T 2j0j_A          538 SRYMEDST--YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RL  611 (656)
T ss_dssp             CCSCCC------------CCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC-CC
T ss_pred             CeecCCCc--ceeccCCCCCcceeCHHHhcCC---CCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-CC
Confidence            98764321  1122334678899999998643   68999999999999999997 999999999888888776554 45


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..+..+++++.++|.+||..||++||++.++++.|..
T Consensus       612 ~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            5788999999999999999999999999999987765

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.1e-41  Score=349.09  Aligned_cols=261  Identities=21%  Similarity=0.265  Sum_probs=197.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .+..++|++.+.||+|+||.||+|.+.       +++.||||+++..........+.++. .+++.++|+||+++++++.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~   97 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRLA-------DGTLVAVKRLKEERTQGGELQFQTEV-EMISMAVHRNLLRLRGFCM   97 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECCS-------SSCCEEEEECCC-----CCCHHHHHH-HGGGTCCCTTBCCCCEEEC
T ss_pred             HHHhhccccceeEecCCCcEEEEEEec-------CCCEEEEEEeccccCchHHHHHHHHH-HHHHhccCCCccceEEEEe
Confidence            356788999999999999999999743       23579999997654322211122222 2556778999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeecccCCcEEEccCCcEEEec
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~--~~~l~~~~~~~i~~qIa~gL~yLHs~---gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ..+..|+||||++| +|.+.+....  ..++++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  177 (326)
T 3uim_A           98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD  177 (326)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred             cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence            99999999999985 7777765432  23599999999999999999999999   999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHH
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAV  265 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-----~~~ei~~~i  265 (620)
                      ||+++......  ........||+.|+|||++.+.   .++.++||||||+++|+|++|..||...     ......+.+
T Consensus       178 fg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          178 FGLAKLMDYKD--THVTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             CSSCEECCSSS--SCEECCCCSCGGGCCHHHHHHS---EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             CccccccCccc--ccccccccCCcCccCHHHhccC---CCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            99998763211  1222345699999999998643   5889999999999999999999999521     111111111


Q ss_pred             Hh---cc---------CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          266 VR---RQ---------EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       266 ~~---~~---------~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..   ..         .....+...++++.+++.+||+.||.+||++.++++.|+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            10   00         00112223357899999999999999999999999999874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=350.95  Aligned_cols=262  Identities=19%  Similarity=0.201  Sum_probs=201.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +..++|++.+.||+|+||.||+|.+..++      +.||||+++............++. .+++.++||||+++++++..
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~~~~~~~~   78 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTG------DLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLFAIEEE   78 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEECGGGGGSCHHHHHHHH-HHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCC------cEEEEEEeccccccchHHHHHHHH-HHHHhcCCCCCCeEEEeecc
Confidence            44578999999999999999999987655      489999997644322222222222 35566789999999999987


Q ss_pred             CC--EEEEEEecCCC-ChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE----ccCCcEEEe
Q 007046          118 NG--KICIIMKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLG  189 (620)
Q Consensus       118 ~~--~~~IVmE~~~G-sLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl----d~~~~vkL~  189 (620)
                      .+  ..||||||++| +|.+.+.... ...+++..++.++.||+.||+|||+++|+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence            55  78999999985 6666665322 2349999999999999999999999999999999999999    777889999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CHHH
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV-----RGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDE  260 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~----~~~e  260 (620)
                      |||+++....    ........||+.|+|||++.+..     ...++.++|||||||++|||++|+.||...    ...+
T Consensus       159 DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~  234 (396)
T 4eut_A          159 DFGAARELED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE  234 (396)
T ss_dssp             CGGGCEECCC----GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHH
T ss_pred             cCCCceEccC----CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHH
Confidence            9999987643    22234567999999999975310     124678999999999999999999999642    2345


Q ss_pred             HHHHHHhccCCC-----------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          261 IYDAVVRRQEIP-----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       261 i~~~i~~~~~~~-----------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ++..+.......                       .++..+++.+.++|.+||+.||++||++.++++.+...
T Consensus       235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             HHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            555555432211                       11133567788999999999999999999999877663

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.4e-39  Score=334.78  Aligned_cols=254  Identities=22%  Similarity=0.313  Sum_probs=196.4

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc---hhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~---~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      |...+.||+|+||.||+|.+.        ++.||||++....   .......+.++. .+++.++||||+++++++...+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~  103 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVN--------NTTVAVKKLAAMVDITTEELKQQFDQEI-KVMAKCQHENLVELLGFSSDGD  103 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESS--------SCEEEEEEECCCTTSCTTTHHHHHHHHH-HHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccCCccccCCCeEEEEEEEC--------CceEEEEEEecccCcchHHHHHHHHHHH-HHHHhcCCCCeEEEEEEEecCC
Confidence            455689999999999999752        2479999997532   122222233332 2456678999999999999888


Q ss_pred             EEEEEEecCC-CChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ..|+||||++ |+|.+.+.... ..++++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          104 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS  183 (307)
T ss_dssp             SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            9999999997 67777776433 357999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhc-----
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRR-----  268 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~e----i~~~i~~~-----  268 (620)
                      .... .........||+.|+|||.+.+    .++.++|+||||+++|+|++|..||......+    +...+...     
T Consensus       184 ~~~~-~~~~~~~~~g~~~y~aPE~~~~----~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  258 (307)
T 2nru_A          184 EKFA-QTVMTSRIVGTTAYMAPEALRG----EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIE  258 (307)
T ss_dssp             CSCS-SCEECSSCCSCGGGCCHHHHTT----EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHH
T ss_pred             cccc-ccccccccCCCcCcCChHHhcC----CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhh
Confidence            4311 1112234579999999999854    47889999999999999999999998654332    22222111     


Q ss_pred             ----cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          269 ----QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       269 ----~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                          ......+..++..+.+++.+||+.||.+||++.++++.|+..
T Consensus       259 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          259 DYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             hhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                111223344567899999999999999999999999988764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=8.4e-39  Score=335.39  Aligned_cols=255  Identities=21%  Similarity=0.315  Sum_probs=199.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHH-ccCCCceeEeEEEEEECC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLK-CQGVEGICWLQGISVING  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~-~~~h~nIv~l~g~~~~~~  119 (620)
                      ++|++.+.||+|+||.||+|++.        ++.||||+++....   ..+..+.. ++.. .++||||+++++++....
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~--------~~~vavK~~~~~~~---~~~~~e~~-~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR--------GEEVAVKIFSSREE---RSWFREAE-IYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--------TEEEEEEEECGGGH---HHHHHHHH-HHHHSCCCCTTBCCEEEEEECCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc--------CccEEEEEeCchhH---HHHHHHHH-HHHHhhcCCCcEEEEEeeecccC
Confidence            68999999999999999999863        35899999965432   22223222 3332 379999999999998875


Q ss_pred             ----EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeeecccCCcEEEccCCcE
Q 007046          120 ----KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--------SKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       120 ----~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH--------s~gIiHrDLKP~NILld~~~~v  186 (620)
                          ..|+||||++| +|.+.+..   ..+++..++.++.||+.||.|||        +.+|+||||||+|||++.++.+
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~  186 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  186 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred             CccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence                79999999995 77777743   46899999999999999999999        8999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCC-CCCCCcCCCCCCCCcccccCCCCC---CCCchhhHHHHHHHHHHHHhC----------CCC
Q 007046          187 VLGDVGIPHLLLGIPLPS-SDLPRRLGTPNYMAPEQWQPEVRG---PISFETDSWGFACSIIEMLTG----------VQP  252 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~~~---~~s~~sDVwSlGvil~elltG----------~~P  252 (620)
                      ||+|||+++......... .......||+.|+|||++.+....   .++.++|||||||++|||+||          ..|
T Consensus       187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p  266 (342)
T 1b6c_B          187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP  266 (342)
T ss_dssp             EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence            999999998764322110 123455799999999998643211   233689999999999999999          789


Q ss_pred             CCCC-----CHHHHHHHHHhccCCCCCCC-----CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          253 RCGR-----SVDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       253 f~~~-----~~~ei~~~i~~~~~~~~~p~-----~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      |...     ....+...+......+.++.     .++..+.+||.+||+.||++||++.++++.|+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            8764     23445555544444444443     3456899999999999999999999999988763

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4.9e-39  Score=338.30  Aligned_cols=250  Identities=16%  Similarity=0.206  Sum_probs=203.5

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-----------------HHHHHHHHHHH
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-----------------RVLLERLNDLF   99 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-----------------~~~~~~~~~~~   99 (620)
                      .+..++|++.+.||+|+||.||+|.+  +      ++.||||++........                 ..+..+.  .+
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~--~~   96 (348)
T 2pml_X           27 DKYINDYRIIRTLNQGKFNKIILCEK--D------NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNEL--QI   96 (348)
T ss_dssp             CEEETTEEEEEEEECCSSCCEEEEEE--T------TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHH--HH
T ss_pred             ccccCceEEEEEEcCCCCeEEEEEEc--C------CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHH--HH
Confidence            34568999999999999999999987  3      35899999975322110                 3333332  35


Q ss_pred             HHccCCCceeEeEEEEEECCEEEEEEecCCC-ChHHH------HHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeee
Q 007046          100 LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDR------MAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVL  171 (620)
Q Consensus       100 l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~G-sLld~------l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHr  171 (620)
                      ++.++||||+++++++...+..|+||||++| +|.++      +.......+++..++.++.||+.||.|||+ .||+||
T Consensus        97 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~  176 (348)
T 2pml_X           97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR  176 (348)
T ss_dssp             HTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence            6667899999999999999999999999996 66665      432225789999999999999999999999 999999


Q ss_pred             cccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCc-hhhHHHHHHHHHHHHhCC
Q 007046          172 NLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISF-ETDSWGFACSIIEMLTGV  250 (620)
Q Consensus       172 DLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~-~sDVwSlGvil~elltG~  250 (620)
                      ||||+|||++.++.+||+|||+++....     .......||+.|+|||.+.+.  ..++. ++|+||||+++|+|++|.
T Consensus       177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~l~~g~  249 (348)
T 2pml_X          177 DVKPSNILMDKNGRVKLSDFGESEYMVD-----KKIKGSRGTYEFMPPEFFSNE--SSYNGAKVDIWSLGICLYVMFYNV  249 (348)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECBT-----TEECSSCSCGGGCCGGGGSSC--CCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred             CCChHhEEEcCCCcEEEecccccccccc-----ccccCCCCCcCccCchhhcCC--CCCCcchhhHHHHHHHHHHHHhCC
Confidence            9999999999999999999999987633     133456799999999998643  14555 899999999999999999


Q ss_pred             CCCCCCCH-HHHHHHHHhccCCCCCC-------------------CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          251 QPRCGRSV-DEIYDAVVRRQEIPPIP-------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       251 ~Pf~~~~~-~ei~~~i~~~~~~~~~p-------------------~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .||..... .++...+.....  .++                   ..+++++.+||.+||+.||++||++.++++
T Consensus       250 ~pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          250 VPFSLKISLVELFNNIRTKNI--EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CSSCCSSCSHHHHHHHTSCCC--CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCcHHHHHHHHhccCc--CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99988776 667766654432  233                   678999999999999999999999999997

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.4e-38  Score=322.10  Aligned_cols=250  Identities=19%  Similarity=0.288  Sum_probs=190.0

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE---
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI---  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~---  117 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||+++... .....+.++.  .+++.++||||+++++++..   
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~-~~~~~~~~E~--~~l~~l~h~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDS------RYYAIKKIRHTE-EKLSTILSEV--MLLASLNHQYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEEEH-HHHHHHHHHH--HHHTTCCCTTBCCEEEEEEECCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCC------eEEEEEEEeccH-HHHHHHHHHH--HHHHhcCchHHHHHHHHHHhhcc
Confidence            46999999999999999999976555      489999996432 2223333332  35667799999999998865   


Q ss_pred             ----------CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          118 ----------NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       118 ----------~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                                .+..|+||||++| +|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~  155 (303)
T 1zy4_A           77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNV  155 (303)
T ss_dssp             CCC------CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred             hhhhhcccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCE
Confidence                      3568999999985 77777654 45568899999999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCC-----------CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          187 VLGDVGIPHLLLGIPL-----------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       187 kL~DFGla~~~~~~~~-----------~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      ||+|||+++.......           .........||+.|+|||.+.+.  +.++.++|+|||||++|+|++   ||..
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSC--SCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC--CCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            9999999986532110           01223455799999999998632  358899999999999999998   5543


Q ss_pred             -CCHHHHHHHHHhcc--CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          256 -RSVDEIYDAVVRRQ--EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       256 -~~~~ei~~~i~~~~--~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                       .+..++...+....  .++.++...++.+.++|.+||+.||++||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          231 GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence             23334444444322  233455678889999999999999999999999997

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=347.83  Aligned_cols=257  Identities=16%  Similarity=0.176  Sum_probs=189.7

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..+...+|++.+.||+|+||+||... ..      .++.||||++........    .++..++..+.+||||+++++++
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~~-~~------~~~~vAvK~~~~~~~~~~----~~E~~~l~~l~~HpnIv~l~~~~   87 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYRG-MF------DNRDVAVKRILPECFSFA----DREVQLLRESDEHPNVIRYFCTE   87 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEE-ES------SSSEEEEEEECTTTEEEC----HHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             EEEccEEEecCCeeecCcCEEEEEEE-Ee------CCeEEEEEEECHHHHHHH----HHHHHHHHhccCCCCcCeEEEEE
Confidence            34666789999999999999966432 22      235799999976543321    12233344455899999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-----CCcEEEec
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-----ADRAVLGD  190 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-----~~~vkL~D  190 (620)
                      ......|||||||+|+|.+.+.. ....+.+..++.++.||+.||.|||+++|+||||||+|||++.     ...+||+|
T Consensus        88 ~~~~~~~lv~E~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~D  166 (432)
T 3p23_A           88 KDRQFQYIAIELCAATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISD  166 (432)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred             ecCCEEEEEEECCCCCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence            99999999999999998888864 3345566677899999999999999999999999999999953     23588999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcc
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      ||+++................||+.|+|||++.+.....++.++|||||||++|||++ |..||.......... +....
T Consensus       167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-~~~~~  245 (432)
T 3p23_A          167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-LLGAC  245 (432)
T ss_dssp             TTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCC
T ss_pred             ccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-HhccC
Confidence            9999876433222233445689999999999975445567889999999999999999 999997655444332 22221


Q ss_pred             CCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....  .+...+..+.+||.+||+.||++||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1111  12334567899999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6.6e-39  Score=335.20  Aligned_cols=244  Identities=18%  Similarity=0.216  Sum_probs=196.5

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH------HHHHHHHHHHHHHHcc-CCCceeE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR------MRVLLERLNDLFLKCQ-GVEGICW  110 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~------~~~~~~~~~~~~l~~~-~h~nIv~  110 (620)
                      .-.++|++.+.||+|+||.||+|++..++      +.||||+++......      ...+..+ ..++..+. .|+||++
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~E-~~~l~~l~~~~~~i~~  112 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDN------LPVAIKHVEKDRISDWGELPNGTRVPME-VVLLKKVSSGFSGVIR  112 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTT------EEEEEEEEEGGGCCCEEECTTCCEEEHH-HHHHHHHCSSSCSBCC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEEecccchhhhhhhhhhHHHHH-HHHHHhhccCCCCceE
Confidence            45678999999999999999999976554      589999997543211      0111112 22333333 4799999


Q ss_pred             eEEEEEECCEEEEEEecCC--CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc-cCCcEE
Q 007046          111 LQGISVINGKICIIMKFYE--GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAV  187 (620)
Q Consensus       111 l~g~~~~~~~~~IVmE~~~--GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld-~~~~vk  187 (620)
                      +++++...+..++|||++.  ++|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+|
T Consensus       113 ~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~k  190 (320)
T 3a99_A          113 LLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK  190 (320)
T ss_dssp             EEEEEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             EEEEEecCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEE
Confidence            9999999999999999997  678777764  46799999999999999999999999999999999999999 779999


Q ss_pred             EeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          188 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       188 L~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      |+|||+++....     .......||+.|+|||++.+.  ..++.++|+||||+++|||++|..||....  +    +..
T Consensus       191 L~Dfg~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~--~----~~~  257 (320)
T 3a99_A          191 LIDFGSGALLKD-----TVYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----IIR  257 (320)
T ss_dssp             ECCCTTCEECCS-----SCBCCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHH
T ss_pred             EeeCcccccccc-----ccccCCCCCccCCChHHhccC--CCCCccchHHhHHHHHHHHHHCCCCCCChh--h----hhc
Confidence            999999987642     223445799999999998643  124678999999999999999999996532  1    222


Q ss_pred             ccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .  ...++..+++++.+||.+||+.||++||++.++++
T Consensus       258 ~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          258 G--QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             C--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c--cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2  33456789999999999999999999999999997

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=326.69  Aligned_cols=247  Identities=19%  Similarity=0.247  Sum_probs=187.4

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHH-----HHHHHHHHHHHc---cCCCc
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-----LLERLNDLFLKC---QGVEG  107 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~-----~~~~~~~~~l~~---~~h~n  107 (620)
                      ...-.++|++.+.||+|+||.||+|++..++      +.||||+++.........     ....+...+.++   .+|+|
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~   99 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDR------LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG   99 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTC------CEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSS
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCC------eEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCC
Confidence            3445678999999999999999999876554      489999997654322111     111122222222   28999


Q ss_pred             eeEeEEEEEECCEEEEEEec-CC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc-cCC
Q 007046          108 ICWLQGISVINGKICIIMKF-YE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EAD  184 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~-~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld-~~~  184 (620)
                      |+++++++...+..++|||+ +. ++|.+.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++ .++
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC
Confidence            99999999998999999999 55 677777764  45799999999999999999999999999999999999999 889


Q ss_pred             cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 007046          185 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA  264 (620)
Q Consensus       185 ~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~  264 (620)
                      .+||+|||+++....     .......||+.|+|||++.+.  ...+.++|+||||+++|+|++|+.||....  +    
T Consensus       178 ~~kl~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~----  244 (312)
T 2iwi_A          178 CAKLIDFGSGALLHD-----EPYTDFDGTRVYSPPEWISRH--QYHALPATVWSLGILLYDMVCGDIPFERDQ--E----  244 (312)
T ss_dssp             EEEECCCSSCEECCS-----SCBCCCCSCTTTSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----
T ss_pred             eEEEEEcchhhhccc-----CcccccCCcccccCceeeecC--CCCCccchHHHHHHHHHHHHHCCCCCCChH--H----
Confidence            999999999987643     233456799999999998643  123458999999999999999999996532  2    


Q ss_pred             HHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       265 i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..  ....++..++.++.++|.+||+.||++||++.++++
T Consensus       245 ~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          245 ILE--AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHH--TCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             Hhh--hccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            222  234467889999999999999999999999999998

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.5e-37  Score=337.67  Aligned_cols=253  Identities=18%  Similarity=0.228  Sum_probs=183.7

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .+.|.+.+.||+|+||+||.+.. .      .++.||||++.....+   .. .++..++..+.+||||+++++++..++
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~-~------~g~~vAvK~~~~~~~~---~~-~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGS-F------QGRPVAVKRMLIDFCD---IA-LMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEE-S------SSSEEEEEEEEGGGHH---HH-HHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             hheeeccCeEeeCCCeEEEEEEE-E------CCeEEEEEEEcHHHHH---HH-HHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            35577789999999999987542 2      2458999999754322   22 223334445568999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-----------
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-----------  183 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~-----l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-----------  183 (620)
                      .+|||||||+|+|.+.+.......     .++..++.++.||+.||+|||+++|+||||||+|||++.+           
T Consensus        83 ~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~  162 (434)
T 2rio_A           83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGA  162 (434)
T ss_dssp             EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred             eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCC
Confidence            999999999999888886422111     1233457899999999999999999999999999999754           


Q ss_pred             --CcEEEeccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCC----CCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 007046          184 --DRAVLGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLT-GVQPRCG  255 (620)
Q Consensus       184 --~~vkL~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~----~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~  255 (620)
                        +.+||+|||+++........ ........||+.|+|||++.+.    ....++.++|||||||++|||+| |..||..
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence              48999999999876432211 1123346899999999998652    12468899999999999999999 9999976


Q ss_pred             CCHHHHHHHHHhccCC-CCC----CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          256 RSVDEIYDAVVRRQEI-PPI----PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~-~~~----p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ....+  ..+...... +..    +..+++++.+||.+||+.||++||++.++++
T Consensus       243 ~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             TTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            55433  223333222 111    1234688999999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-36  Score=314.94  Aligned_cols=226  Identities=17%  Similarity=0.218  Sum_probs=178.8

Q ss_pred             CCCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           40 PSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        40 ~~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      .++|.+. +.||+|+||.||+|.+..++      +.||||+++...     . ..++...+.+..+|+||+++++++.. 
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~-----~-~~~e~~~~~~~~~h~~i~~~~~~~~~~   83 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCP-----K-ARREVELHWRASQCPHIVRIVDVYENL   83 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSH-----H-HHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCC------cEEEEEEecccH-----H-HHHHHHHHHHhccCCCchhHHhhhhhh
Confidence            4668887 77999999999999987655      489999996432     1 12223345567799999999999987 


Q ss_pred             ---CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEec
Q 007046          118 ---NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGD  190 (620)
Q Consensus       118 ---~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~D  190 (620)
                         ...+||||||++| +|.+.+.......+++..++.++.||+.||.|||+++|+||||||+|||++.   ++.+||+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence               6779999999985 8888887644567999999999999999999999999999999999999998   78999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+++...+                            ..++.++|+|||||++|+|++|..||.+....+....+.....
T Consensus       164 fg~a~~~~~----------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  215 (299)
T 3m2w_A          164 FGFAKETTG----------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  215 (299)
T ss_dssp             CTTCEECTT----------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSC
T ss_pred             ccccccccc----------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHh
Confidence            999865421                            1467799999999999999999999987655443222111111


Q ss_pred             --CCCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 --IPPIP----SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 --~~~~p----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                        ....+    ..+++++.++|.+||+.||++||++.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence              11122    568999999999999999999999999998

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3.1e-36  Score=310.98  Aligned_cols=227  Identities=18%  Similarity=0.154  Sum_probs=179.2

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      +-.++|++.+.||+|+||.||+|++..++      +.||||+++......   ...+.++.  ..+..++|+||++++++
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~e~--~~l~~l~hp~iv~~~~~   99 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALD------RQVALTFVDPQGVLPDDVLQETLSRT--LRLSRIDKPGVARVLDV   99 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTT------EEEEEEESCTTCCSCHHHHHHHHHHH--HHHHTCCCTTBCCEEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCC------ceEEEEEECcccccCHHHHHHHHHHH--HHHhcCCCCCcceeeEE
Confidence            44578999999999999999999976554      589999998754322   23333332  24577899999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +..++..||||||++| +|.+++.   .+ ....++..++.||+.||+|||++||+||||||+|||++.++.+||+++| 
T Consensus       100 ~~~~~~~~lv~e~~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-  174 (286)
T 3uqc_A          100 VHTRAGGLVVAEWIRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-  174 (286)
T ss_dssp             EEETTEEEEEEECCCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-
T ss_pred             EEECCcEEEEEEecCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-
Confidence            9999999999999985 6666652   33 3666789999999999999999999999999999999999999998543 


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhccC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD---AVVRRQE  270 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~---~i~~~~~  270 (620)
                                            |++          +++.++|||||||++|||+||+.||.+.+..+.+.   .......
T Consensus       175 ----------------------~~~----------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~  222 (286)
T 3uqc_A          175 ----------------------TMP----------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP  222 (286)
T ss_dssp             ----------------------CCT----------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCB
T ss_pred             ----------------------ccC----------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCC
Confidence                                  333          36779999999999999999999998765433110   0001111


Q ss_pred             CC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          271 IP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       271 ~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .+  ..+..+++++.++|.+||+.||++| |+.++++.|...
T Consensus       223 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          223 IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            10  1336799999999999999999999 999999988874

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.9e-37  Score=335.11  Aligned_cols=247  Identities=14%  Similarity=0.134  Sum_probs=182.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCC-Cc------
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGV-EG------  107 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h-~n------  107 (620)
                      ....+|++.+.||+|+||.||+|++..++      +.||||+++......   ...+.++ . ..++.+.| +|      
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g------~~vAvK~~~~~~~~~~~~~~~~~~E-~-~~~~~l~~~~~~~~~~~  146 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETG------ESFEVHVPYFTERPPSNAIKQMKEE-V-LRLRLLRGIKNQKQAKV  146 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEECCSCC----CCHHHHHH-H-HGGGGSTTCCSHHHHHH
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCC------CceEEEEEecCCCccHHHHHHHHHH-H-HHHHhhccCCCHHHHHH
Confidence            34456999999999999999999987665      489999998443322   1222222 2 12333433 21      


Q ss_pred             ---------------eeEeEEEEEE-----CCEEEEEEecCCCChHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHH
Q 007046          108 ---------------ICWLQGISVI-----NGKICIIMKFYEGSVGDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQ  162 (620)
Q Consensus       108 ---------------Iv~l~g~~~~-----~~~~~IVmE~~~GsLld~l~~~-----~~~~l~~~~~~~i~~qIa~gL~y  162 (620)
                                     ...+..++..     ...++++|+++.++|.+++...     ....+++..++.++.||+.||+|
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  226 (413)
T 3dzo_A          147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLAS  226 (413)
T ss_dssp             HTCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHH
Confidence                           1111111121     1247899999999999888533     23457788999999999999999


Q ss_pred             HHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC-------CCCCCCchhh
Q 007046          163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-------VRGPISFETD  235 (620)
Q Consensus       163 LHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~-------~~~~~s~~sD  235 (620)
                      ||+++|+||||||+|||++.++.+||+|||+++....      .....+| +.|||||++.+.       ....++.++|
T Consensus       227 LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D  299 (413)
T 3dzo_A          227 LHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD  299 (413)
T ss_dssp             HHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred             HHhCCcccCCcccceEEEecCCeEEEEeccceeecCC------ccccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence            9999999999999999999999999999999886532      2345678 999999998321       1235788999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       236 VwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ||||||++|||++|+.||...+..+....+..      ....+|+++.+||.+||+.||++||++.++++
T Consensus       300 vwSlGvil~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          300 TWTLGLAIYWIWCADLPNTDDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            99999999999999999988765554433321      12468899999999999999999999988875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-35  Score=339.55  Aligned_cols=242  Identities=21%  Similarity=0.251  Sum_probs=185.0

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +-.++|++.+.||+|+||.||+|.+...     +++.||||++..............+. .++..++||||+++++++..
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~hp~iv~~~~~~~~  150 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNV-----NGRPVVLKGLVHSGDAEAQAMAMAER-QFLAEVVHPSIVQIFNFVEH  150 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGG-----TTEEEEEEESCSSCCHHHHHHHHHHH-GGGGGCCCTTBCCEEEEEEE
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCC-----CCcEEEEEEeCccCCHHHHHHHHHHH-HHHHhcCCCCcCeEeeeEee
Confidence            3358999999999999999999998652     23589999997654333332222222 35667799999999999987


Q ss_pred             CCE-----EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          118 NGK-----ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       118 ~~~-----~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      .+.     .||||||++|..+..+.   ...+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||
T Consensus       151 ~~~~~~~~~~lv~E~~~g~~L~~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG  226 (681)
T 2pzi_A          151 TDRHGDPVGYIVMEYVGGQSLKRSK---GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG  226 (681)
T ss_dssp             ECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred             cCCCCCceeEEEEEeCCCCcHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecc
Confidence            654     79999999964433332   2379999999999999999999999999999999999999975 99999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++....       .....||+.|||||++.+.    ++.++|||||||++|+|++|.+||.+.....+        ...
T Consensus       227 ~a~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------~~~  287 (681)
T 2pzi_A          227 AVSRINS-------FGYLYGTPGFQAPEIVRTG----PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------PED  287 (681)
T ss_dssp             TCEETTC-------CSCCCCCTTTSCTTHHHHC----SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------CTT
T ss_pred             cchhccc-------CCccCCCccccCHHHHcCC----CCCceehhhhHHHHHHHHhCCCCCcccccccc--------ccc
Confidence            9987632       1456799999999998643    48899999999999999999999865321100        000


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCC-HHHHHHHHH
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPL-MTDILRVFK  308 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs-~~eil~~L~  308 (620)
                      ......++.+.+||.+||+.||++||+ ++++...|.
T Consensus       288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            001124578999999999999999995 455555444

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.3e-35  Score=309.89  Aligned_cols=240  Identities=15%  Similarity=0.174  Sum_probs=180.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--------HHHHHHHHHHHHHHHcc-----
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLERLNDLFLKCQ-----  103 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--------~~~~~~~~~~~~~l~~~-----  103 (620)
                      .+..++|++.+.||+|+||.||+|++  +      ++.||||+++.....        ....+..+. .++..+.     
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~--~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~~l~~~   86 (336)
T 2vuw_A           16 CLPTEKLQRCEKIGEGVFGEVFQTIA--D------HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEI-IISKELSLLSGE   86 (336)
T ss_dssp             HSCHHHHHTCEEEEEETTEEEEEEEE--T------TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHH-HHHHHHHHGGGC
T ss_pred             hcccccchheeeecccCceEEEEEEe--C------CceEEEEEEecCCccccccccchhHHHHHHHH-HHHHHHHHhhcc
Confidence            35678899999999999999999986  2      258999999865321        112222222 2222222     


Q ss_pred             ---CCCceeEeEEEEEE------------------------------CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHH
Q 007046          104 ---GVEGICWLQGISVI------------------------------NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNV  149 (620)
Q Consensus       104 ---~h~nIv~l~g~~~~------------------------------~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~  149 (620)
                         .|+||+++.+++..                              .+.+||||||++| ++++.+.   ...+++..+
T Consensus        87 ~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~  163 (336)
T 2vuw_A           87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATA  163 (336)
T ss_dssp             SSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHH
T ss_pred             ccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHH
Confidence               58888888887542                              6789999999984 4666663   367899999


Q ss_pred             HHHHHHHHHHHHHHH-HCCCeeecccCCcEEEccCC--------------------cEEEeccCCcccccCCCCCCCCCC
Q 007046          150 FRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEAD--------------------RAVLGDVGIPHLLLGIPLPSSDLP  208 (620)
Q Consensus       150 ~~i~~qIa~gL~yLH-s~gIiHrDLKP~NILld~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~  208 (620)
                      +.++.||+.||+||| +++|+||||||+|||++.++                    .+||+|||+|+....        .
T Consensus       164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~  235 (336)
T 2vuw_A          164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------G  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------T
T ss_pred             HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------C
Confidence            999999999999999 99999999999999999887                    899999999987642        2


Q ss_pred             CcCCCCCCCCcccccCCCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHhccCCCC-----CCCCCCHH
Q 007046          209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS-IIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPP-----IPSGLPPA  281 (620)
Q Consensus       209 ~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvi-l~elltG~~Pf~~~~~-~ei~~~i~~~~~~~~-----~p~~~s~~  281 (620)
                      ..+||+.|||||++.+.    .+.++|||||+++ .+++++|..||..... ..+.+.+........     .+..++++
T Consensus       236 ~~~gt~~y~aPE~~~g~----~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGD----GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             EEECCCCTTCSGGGCCC----SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred             cEEEeecccChhhhcCC----CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHH
Confidence            45899999999999754    3789999998777 7778889999854211 223333432221111     12357899


Q ss_pred             HHHHHHHhhhcCcCCCCCHHHHH-H
Q 007046          282 VENVLLGCFEYDLRSRPLMTDIL-R  305 (620)
Q Consensus       282 l~~Li~~cL~~dP~~RPs~~eil-~  305 (620)
                      +.+||.+||++|     |+.+++ +
T Consensus       312 ~~dli~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHHhc
Confidence            999999999976     999998 5

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.4e-35  Score=338.17  Aligned_cols=251  Identities=20%  Similarity=0.210  Sum_probs=186.8

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE--
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI--  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~--  117 (620)
                      .++|++.++||+|+||.||+|.+..++      +.||||+++..........+.++. .+++.++||||+++++++..  
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg------~~VAVKvi~~~~~~~~~~~~~~Ei-~iL~~L~HpnIV~l~~v~~~~~   85 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTG------EQVAIKQCRQELSPKNRERWCLEI-QIMKKLNHPNVVSAREVPDGLQ   85 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTT------CCEEECCCCSCCCHHHHHHHHHHH-HHHHHCCBTTBCCEEECCTTTC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCC------cEEEEEEecccCCHHHHHHHHHHH-HHHHhCCCCCCCceeeeecccc
Confidence            378999999999999999999876554      479999998654433333333333 35566799999999998755  


Q ss_pred             ----CCEEEEEEecCC-CChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCc---EEE
Q 007046          118 ----NGKICIIMKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVL  188 (620)
Q Consensus       118 ----~~~~~IVmE~~~-GsLld~l~~~~-~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~---vkL  188 (620)
                          ++..|+||||++ |+|.+.+.... ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.   +||
T Consensus        86 ~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEE
Confidence                667899999997 57766665422 236899999999999999999999999999999999999997765   999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD-----  263 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~-----  263 (620)
                      +|||+++.....    .......||+.|+|||.+.+   ..++.++|+||||+++|+|++|..||..........     
T Consensus       166 ~DFG~a~~~~~~----~~~~~~~gt~~Y~APE~l~~---~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~  238 (676)
T 3qa8_A          166 IDLGYAKELDQG----ELCTEFVGTLQYLAPELLEQ---KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE  238 (676)
T ss_dssp             CSCCCCCBTTSC----CCCCCCCSCCTTCSSCSSCC---SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred             cccccccccccc----cccccccCCcccCChHHhcc---CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence            999999876432    23345689999999999864   368899999999999999999999997643321100     


Q ss_pred             ----HHH-----hcc----C----CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHH
Q 007046          264 ----AVV-----RRQ----E----IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL  304 (620)
Q Consensus       264 ----~i~-----~~~----~----~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil  304 (620)
                          .+.     ...    .    ...++..+++++.++|.+||..||++||++.+++
T Consensus       239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence                000     000    0    0112234678999999999999999999997754

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=5e-29  Score=281.33  Aligned_cols=189  Identities=12%  Similarity=0.035  Sum_probs=125.3

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---------hHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---------DRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---------~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ...++.|++|.+..++...+++      .||+|++.....         +...+.+.++.+++.++.+|+||++++++++
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~------~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e  312 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGE------DYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE  312 (569)
T ss_dssp             ECC-C--------CCEEEEECS------SEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE
T ss_pred             hhccccCCcccccccccccccc------eeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE
Confidence            3456778888888877766665      599999976421         1112223334444555558999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      +++.+||||||++| +|.+++.  ..++++..   .|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+
T Consensus       313 d~~~~yLVMEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr  387 (569)
T 4azs_A          313 NAQSGWLVMEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIV  387 (569)
T ss_dssp             CSSEEEEEEECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEE
T ss_pred             ECCEEEEEEecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCe
Confidence            99999999999996 6666665  45677764   588999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP  252 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~P  252 (620)
                      ....   ......+.+||+.|||||++.+    .+...+|+||+|++++++.++..+
T Consensus       388 ~~~~---~~~~~~t~vGTp~YmAPE~l~g----~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          388 TTPQ---DCSWPTNLVQSFFVFVNELFAE----NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             SCC------CCSHHHHHHHHHHHHHHC---------------------CCCCTTHHH
T ss_pred             eCCC---CCccccCceechhhccHHHhCC----CCCCcccccccccchhhhccccch
Confidence            7643   2233456789999999999864    366789999999998887665433

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=5.1e-24  Score=238.96  Aligned_cols=189  Identities=16%  Similarity=0.121  Sum_probs=132.6

Q ss_pred             eEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch--hHH-----HHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE--DRM-----RVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        44 ~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~--~~~-----~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ...+.||+|+||.||+|...        +..+|+|.......  ...     ...+.++. .+++.++||||+++..++.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~--------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~-~il~~l~h~nIv~~~~~~~  409 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL--------DFDVIIKERVKKGYRDERLDENIRKSRTAREA-RYLALVKDFGIPAPYIFDV  409 (540)
T ss_dssp             ---------CCEEEEEEECS--------SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHH-HHHHHGGGGTCCCCCEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC--------CCeEEEEEEecccccchhhhhHHHHHHHHHHH-HHHHhcCCCCcCceEEEEE
Confidence            34578999999999999532        24689998754321  111     11112222 3556679999997666667


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..+..||||||++ |+|.+.+..          +..++.||+.||+|||+++|+||||||+|||++.  .+||+|||+++
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~  477 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGK  477 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCE
T ss_pred             eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCE
Confidence            7788899999998 566665532          5689999999999999999999999999999998  99999999998


Q ss_pred             cccCCCCCCC----CCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 007046          196 LLLGIPLPSS----DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC  254 (620)
Q Consensus       196 ~~~~~~~~~~----~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~  254 (620)
                      ..........    .....+||+.|||||++.... ..|+..+|+|+..+-.++...++.+|.
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~-~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL-EGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH-HHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            7632100000    013568999999999997521 247778899999988888888777663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.83  E-value=4.9e-21  Score=197.28  Aligned_cols=141  Identities=11%  Similarity=0.053  Sum_probs=101.1

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-----------------HHHHHHHHHHHHHHccCCCc
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-----------------MRVLLERLNDLFLKCQGVEG  107 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-----------------~~~~~~~~~~~~l~~~~h~n  107 (620)
                      +.+.||+|+||.||+|.+ .++      +.||||+++......                 ......++..++.. ++  |
T Consensus        94 ~~~~iG~G~~g~Vy~~~~-~~g------~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~-l~--~  163 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS-EKF------GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK-LQ--G  163 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTT------EEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH-TT--T
T ss_pred             ecCEeccCCCceEEEEEe-CCC------CEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh-cc--C
Confidence            339999999999999997 433      589999997532110                 11222233333333 33  3


Q ss_pred             eeEeEEEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       108 Iv~l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                       +++.+++.. +..|+||||++| +|.+ +        .......++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus       164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l--------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~v  231 (282)
T 1zar_A          164 -LAVPKVYAW-EGNAVLMELIDAKELYR-V--------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI  231 (282)
T ss_dssp             -SSSCCEEEE-ETTEEEEECCCCEEGGG-C--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEE
T ss_pred             -CCcCeEEec-cceEEEEEecCCCcHHH-c--------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcE
Confidence             455554443 456999999986 5554 3        1133557999999999999999999999999999999 9999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCccccc
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ  223 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~  223 (620)
                      ||+|||+|+..                ..|+|||.+.
T Consensus       232 kl~DFG~a~~~----------------~~~~a~e~l~  252 (282)
T 1zar_A          232 WIIDFPQSVEV----------------GEEGWREILE  252 (282)
T ss_dssp             EECCCTTCEET----------------TSTTHHHHHH
T ss_pred             EEEECCCCeEC----------------CCCCHHHHHH
Confidence            99999998643                3478999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.74  E-value=6.1e-18  Score=171.60  Aligned_cols=137  Identities=17%  Similarity=0.175  Sum_probs=95.2

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceE--EEEEEecCCchh-----------------------HHHHHHHHHHH
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHE--VAVKILHPVKED-----------------------RMRVLLERLND   97 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~--VAIK~l~~~~~~-----------------------~~~~~~~~~~~   97 (620)
                      |++.+.||+|+||.||+|.+..++      +.  ||||+++.....                       .......++..
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  122 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDG------KPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFR  122 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETT------EEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCC------cEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHH
Confidence            789999999999999999874443      47  999997653211                       00111222222


Q ss_pred             HHHHccCCCc--eeEeEEEEEECCEEEEEEecCC--C----ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCC
Q 007046           98 LFLKCQGVEG--ICWLQGISVINGKICIIMKFYE--G----SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH-SKGI  168 (620)
Q Consensus        98 ~~l~~~~h~n--Iv~l~g~~~~~~~~~IVmE~~~--G----sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLH-s~gI  168 (620)
                       .+..+.|++  ++.++.+    +..||||||++  |    .+.+....     .++..+..++.||+.+|.||| +.||
T Consensus       123 -~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~gi  192 (258)
T 1zth_A          123 -NLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAEL  192 (258)
T ss_dssp             -HHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCE
T ss_pred             -HHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCE
Confidence             233334443  3333332    24689999995  3    33333211     235567899999999999999 9999


Q ss_pred             eeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          169 LVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       169 iHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      +||||||+|||++.  .++|+|||+|...
T Consensus       193 vHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          193 VHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999999998  9999999998754

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.61  E-value=7.6e-16  Score=164.89  Aligned_cols=137  Identities=18%  Similarity=0.187  Sum_probs=90.2

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch-----------------hHHHH---H-HHHHHHHHHH
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE-----------------DRMRV---L-LERLNDLFLK  101 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~-----------------~~~~~---~-~~~~~~~~l~  101 (620)
                      |++..+||+|+||.||+|.+.       .++.||||+++....                 .....   . ..++.. .+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~-nL~  168 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA-FMK  168 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH-HHH
T ss_pred             EEecCEeeeCCceEEEEEECC-------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH-HHH
Confidence            899999999999999999853       246899999864210                 00000   0 011111 122


Q ss_pred             ccCCCceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc
Q 007046          102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN  181 (620)
Q Consensus       102 ~~~h~nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld  181 (620)
                      .+.+.++....-+....  .+|||||++|..+..+.       ....+..++.||+.+|.|||+.|||||||||.|||++
T Consensus       169 rL~~~gv~vp~p~~~~~--~~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          169 ALYEEGFPVPEPIAQSR--HTIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIR  239 (397)
T ss_dssp             HHHHTTCSCCCEEEEET--TEEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             HHHhcCCCCCeeeeccC--ceEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEe
Confidence            22223322111111222  37999999985443221       1234567889999999999999999999999999998


Q ss_pred             cCC----------cEEEeccCCccc
Q 007046          182 EAD----------RAVLGDVGIPHL  196 (620)
Q Consensus       182 ~~~----------~vkL~DFGla~~  196 (620)
                      +++          .+.|+||+-+..
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCCcccccccccceEEEEeCCccc
Confidence            876          389999997654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.13  E-value=2.5e-10  Score=114.66  Aligned_cols=139  Identities=13%  Similarity=0.031  Sum_probs=100.2

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKI  121 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~  121 (620)
                      .|++...++.|+++.||++...        +..+++|+........... +.++...+..+..+..++++++++...+..
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~--------~~~~vlK~~~~~~~~~~~~-~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~   85 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE--------NENLYLKMTDSRYKGTTYD-VEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS--------SCEEEEEEECGGGTTSTTC-HHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             cceeEeeccCCCCCeEEEEECC--------CCcEEEEeCCcccCCCHHH-HHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence            5899999999999999999632        2479999987521111111 222222333333467788999999999999


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS------------------------------------  165 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs------------------------------------  165 (620)
                      |+||||++|..+....      .+......++.+++.+|..||+                                    
T Consensus        86 ~lv~e~i~G~~l~~~~------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEY------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEEECCSSEEHHHHC------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             EEEEEecCCeehhhcc------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            9999999986554331      1122345788999999999998                                    


Q ss_pred             -----------------------CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 -----------------------KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 -----------------------~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                                             ..++|+|++|.|||++.+..+.|+||+.+.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                   348999999999999876556799999764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.91  E-value=1.6e-09  Score=107.66  Aligned_cols=135  Identities=9%  Similarity=-0.049  Sum_probs=88.3

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCC-ceeEeEEEEEECCE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-GICWLQGISVINGK  120 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~-nIv~l~g~~~~~~~  120 (620)
                      .|.+....+.|..+.||++...       .+..+++|+..........    .+...+..+..+. .+++++++...++.
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~-------~g~~~vlK~~~~~~~~~~~----~E~~~l~~l~~~~~~vP~~~~~~~~~~~   89 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQ-------GRPVLFVKTDLSGALNELQ----DEAARLSWLATTGVPCAAVLDVVTEAGR   89 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECT-------TSCCEEEEEECSCTTSCHH----HHHHHHHHHHTTTCCBCCEEEEEECSSC
T ss_pred             CCceEecccCCCCceEEEEecC-------CCCeEEEEeCCcccchhhh----HHHHHHHHHHhCCCCCCeEEEeccCCCC
Confidence            4555544456677999999631       1246999998654222111    1222222222332 26678888887778


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG---------------------------------  167 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g---------------------------------  167 (620)
                      .++||||++|..++ .   .  ...   ...++.+++..|..||+..                                 
T Consensus        90 ~~~v~e~i~G~~l~-~---~--~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (264)
T 1nd4_A           90 DWLLLGEVPGQDLL-S---S--HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE  160 (264)
T ss_dssp             EEEEEECCSSEETT-T---S--CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCG
T ss_pred             CEEEEEecCCcccC-c---C--cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhh
Confidence            99999999985443 1   1  111   2356777778888888643                                 


Q ss_pred             -------------------------CeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          168 -------------------------ILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       168 -------------------------IiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                                               ++|+|++|.|||++.++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          161 EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             GGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                     99999999999998766667999997653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.79  E-value=9.4e-09  Score=108.32  Aligned_cols=142  Identities=12%  Similarity=0.040  Sum_probs=95.7

Q ss_pred             eEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEec--CCchhHHHHHHHHHHHHHHHcc-CCCceeEeEEEEEEC--
Q 007046           44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFLKCQ-GVEGICWLQGISVIN--  118 (620)
Q Consensus        44 ~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~--~~~~~~~~~~~~~~~~~~l~~~-~h~nIv~l~g~~~~~--  118 (620)
                      .-.+.|+.|.++.||+....        +..+++|+..  ..........+.++...+..+. .+..+++++.++...  
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~--------~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~  112 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP--------GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV  112 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS--------SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT
T ss_pred             ceEEEcCCcccceEEEEEEC--------CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc
Confidence            34678999999999998742        1368999886  3321111112222222222222 234578888888765  


Q ss_pred             -CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------
Q 007046          119 -GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------------------------------  165 (620)
Q Consensus       119 -~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs--------------------------------  165 (620)
                       +..|+||||++|..+...   .-..++......++.+++..|..||+                                
T Consensus       113 ~g~~~~vme~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (359)
T 3dxp_A          113 IGRAFYIMEFVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS  189 (359)
T ss_dssp             TSSCEEEEECCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence             458999999998443110   11346788888999999999999997                                


Q ss_pred             --------------------------CCCeeecccCCcEEEccCCc--EEEeccCCccc
Q 007046          166 --------------------------KGILVLNLKPFNFILNEADR--AVLGDVGIPHL  196 (620)
Q Consensus       166 --------------------------~gIiHrDLKP~NILld~~~~--vkL~DFGla~~  196 (620)
                                                ..++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                      35899999999999997753  68999998864

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.60  E-value=8.6e-09  Score=106.17  Aligned_cols=185  Identities=13%  Similarity=0.037  Sum_probs=111.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCc--eeEeEEEEEECC---EE
Q 007046           47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG--ICWLQGISVING---KI  121 (620)
Q Consensus        47 ~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~n--Iv~l~g~~~~~~---~~  121 (620)
                      +.++.|....||+..           ..+++|+....   .....+..+...+..+..+..  +.+++......+   ..
T Consensus        26 ~~~~~G~~n~v~~v~-----------~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~   91 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----------RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMS   91 (304)
T ss_dssp             CEEEECSSEEEEEST-----------TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCS
T ss_pred             EecCCCCcceEEEEC-----------CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcc
Confidence            459999999999863           14899997533   112223333333333323332  445554433332   34


Q ss_pred             EEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 007046          122 CIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS------------------------------------  165 (620)
Q Consensus       122 ~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs------------------------------------  165 (620)
                      |+|||+++|..+.....   ..++..+...++.|++..|..||+                                    
T Consensus        92 ~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (304)
T 3sg8_A           92 FAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP  168 (304)
T ss_dssp             CEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred             eEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence            89999999854432111   246778888889999999999986                                    


Q ss_pred             ----------------------CCCeeecccCCcEEEcc--CCcEEEeccCCcccccCCC-C--CCCC---CC-----Cc
Q 007046          166 ----------------------KGILVLNLKPFNFILNE--ADRAVLGDVGIPHLLLGIP-L--PSSD---LP-----RR  210 (620)
Q Consensus       166 ----------------------~gIiHrDLKP~NILld~--~~~vkL~DFGla~~~~~~~-~--~~~~---~~-----~~  210 (620)
                                            ..++|+|++|.||+++.  ...+.|+||+.+....... .  ....   ..     .+
T Consensus       169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~  248 (304)
T 3sg8_A          169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKI  248 (304)
T ss_dssp             HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHH
Confidence                                  13699999999999998  4567899999886531100 0  0000   00     00


Q ss_pred             CCCCCCCC-cccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 007046          211 LGTPNYMA-PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR  253 (620)
Q Consensus       211 ~GT~~YmA-PE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf  253 (620)
                      .....+.. |+...     ......+.|+++.++|.+.+|..+|
T Consensus       249 l~~Y~~~~~~~~~~-----r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          249 LNHYKHKDIPTVLE-----KYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHTCSCHHHHHH-----HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHcCCCCcHHHHH-----HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            00011122 22221     1122368999999999999998776

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.01  E-value=9.6e-05  Score=73.86  Aligned_cols=134  Identities=13%  Similarity=-0.025  Sum_probs=83.0

Q ss_pred             eeeccCce-EEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           48 RIGRGPFG-EVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        48 ~IG~G~fG-~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      .+..|.-| .||+......      +..+.+|+-.......    +..+...+..+..+-.+.+++.++.+++..|+|||
T Consensus        31 ~~~~G~S~~~v~rl~~~~~------~~~~~lk~~~~~~~~~----~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme  100 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPN------APELFLKHGKGSVAND----VTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT  100 (272)
T ss_dssp             EEECSSSSCEEEEEECCTT------CCCEEEEEEETHHHHH----HHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             EccCCCcCCeEEEEEecCC------CeEEEEEECCCCCHhH----HHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence            34445444 6898764322      3468999876433222    22232233333333447788999999999999999


Q ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------------
Q 007046          127 FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK----------------------------------------  166 (620)
Q Consensus       127 ~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~----------------------------------------  166 (620)
                      +++|..+......     .......+..+++..|..||+.                                        
T Consensus       101 ~l~G~~~~~~~~~-----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (272)
T 4gkh_A          101 AIPGKTAFQVLEE-----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP  175 (272)
T ss_dssp             CCCSEEHHHHHHH-----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred             eeCCccccccccC-----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence            9998544332211     1122234445555555555532                                        


Q ss_pred             ------------------CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 ------------------GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 ------------------gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                                        .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                              158999999999999777777999997653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.93  E-value=0.00016  Score=74.38  Aligned_cols=134  Identities=16%  Similarity=0.111  Sum_probs=82.7

Q ss_pred             EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC-C-ceeEeEEEEE-ECCEEE
Q 007046           46 RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV-E-GICWLQGISV-INGKIC  122 (620)
Q Consensus        46 ~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h-~-nIv~l~g~~~-~~~~~~  122 (620)
                      .+.++.|....||+.     +      ..+++|+-..  . .....+..+...+..+..+ + .+.+++.++. ..+..|
T Consensus        24 v~~l~~G~~n~v~~v-----g------~~~VlR~~~~--~-~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~   89 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----N------GDWVFRFPKS--Q-QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPF   89 (306)
T ss_dssp             EEEEEECSSEEEEEE-----T------TTEEEEEESS--H-HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEE
T ss_pred             eeecCCCcceeEEEE-----C------CEEEEEecCC--c-hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceE
Confidence            355788999999988     1      2489998532  1 1222233333333333332 1 3666666664 345678


Q ss_pred             EEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC------------------------------------
Q 007046          123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK------------------------------------  166 (620)
Q Consensus       123 IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~------------------------------------  166 (620)
                      +|||+++|..+.....   ..++......++.++...|..||+.                                    
T Consensus        90 ~v~e~i~G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~  166 (306)
T 3tdw_A           90 VGYRKVQGQILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE  166 (306)
T ss_dssp             EEEECCCSEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred             EEEeccCCeECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence            9999999855443210   1234555555555566555555542                                    


Q ss_pred             ------------------------CCeeecccCCcEEEcc---CCcE-EEeccCCccc
Q 007046          167 ------------------------GILVLNLKPFNFILNE---ADRA-VLGDVGIPHL  196 (620)
Q Consensus       167 ------------------------gIiHrDLKP~NILld~---~~~v-kL~DFGla~~  196 (620)
                                              .++|+|++|.|||++.   ++.+ .|+||+.+..
T Consensus       167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                    3599999999999987   4554 7999997754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.73  E-value=0.00036  Score=71.76  Aligned_cols=30  Identities=13%  Similarity=0.088  Sum_probs=27.0

Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..++|+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            479999999999999888899999999764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.50  E-value=0.00045  Score=73.38  Aligned_cols=30  Identities=10%  Similarity=0.072  Sum_probs=25.3

Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ..++|+|+.|.|||++.+ .++|+||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            469999999999999865 489999987653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.40  E-value=0.00065  Score=70.83  Aligned_cols=30  Identities=10%  Similarity=-0.011  Sum_probs=25.2

Q ss_pred             CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..++|+|+.|.|||++++..+.|+||+.+.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            468999999999999964457899999765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.13  E-value=0.0062  Score=59.57  Aligned_cols=139  Identities=9%  Similarity=0.016  Sum_probs=91.8

Q ss_pred             ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCC
Q 007046          131 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR  209 (620)
Q Consensus       131 sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~  209 (620)
                      +|.+.+ ...+.+|++++++.++.|.+.+|.-+-. ..-..+=+-|..|++..+|.|.+.+ ..+.              
T Consensus        34 SL~eIL-~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------   97 (229)
T 2yle_A           34 SLEEIL-RLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------   97 (229)
T ss_dssp             EHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             cHHHHH-HHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------------
Confidence            344444 4578999999999999999999887732 1112333457899999999988764 2110              


Q ss_pred             cCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHh
Q 007046          210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGC  289 (620)
Q Consensus       210 ~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~c  289 (620)
                       .....+.+||...    ...+.+.=|||||+++|.-+--..|                   +..+..+|+++.+||..|
T Consensus        98 -~~~~~~~~pe~~~----~~~te~~~IysLG~tLY~ALDygL~-------------------e~eE~eLS~~LE~LL~~M  153 (229)
T 2yle_A           98 -AGEPPPVAGKLGY----SQCMETEVIESLGIIIYKALDYGLK-------------------ENEERELSPPLEQLIDHM  153 (229)
T ss_dssp             ----------CCSS----SSSCHHHHHHHHHHHHHHHHTTTCC-------------------TTEEECCCHHHHHHHHHH
T ss_pred             -ccccCCCChhhcc----ccchHHHHHHHHHHHHHHHhhcCCC-------------------cccchhhCHHHHHHHHHH
Confidence             1122355788752    1356788999999999988863322                   223557899999999999


Q ss_pred             hhc-------------------------CcCCCCCHHHHHHHHHh
Q 007046          290 FEY-------------------------DLRSRPLMTDILRVFKS  309 (620)
Q Consensus       290 L~~-------------------------dP~~RPs~~eil~~L~~  309 (620)
                      ..-                         .+..|+++++|++.=..
T Consensus       154 t~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          154 ANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             TTCCC--------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred             HhcccccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence            865                         24678889999875443

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.08  E-value=0.0012  Score=70.78  Aligned_cols=31  Identities=6%  Similarity=0.126  Sum_probs=27.2

Q ss_pred             HCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          165 SKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       165 s~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ...++|+|++|.|||++.++ +.|+||+.+..
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            45799999999999998776 99999998764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.82  E-value=0.012  Score=60.70  Aligned_cols=77  Identities=21%  Similarity=0.321  Sum_probs=50.8

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHc--cCCCceeEeEEEEEECCE
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC--QGVEGICWLQGISVINGK  120 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~--~~h~nIv~l~g~~~~~~~  120 (620)
                      ..-.+.|+.|....+|+...        .+..+++|+.....    ...+..+...+..+  .....+++++.++...+.
T Consensus        38 i~~~~~l~gG~~n~~y~v~~--------~~~~~vlK~~~~~~----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~  105 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND--------EVQTVFVKINERSY----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGH  105 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES--------SSCEEEEEEEEGGG----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSE
T ss_pred             eeeeEEeCCccceeeeEEEE--------CCCeEEEEeCCccc----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCc
Confidence            34567899999999999863        12468899876432    11222222222222  123567888888887889


Q ss_pred             EEEEEecCCCC
Q 007046          121 ICIIMKFYEGS  131 (620)
Q Consensus       121 ~~IVmE~~~Gs  131 (620)
                      .|+||||++|.
T Consensus       106 ~~lvme~l~G~  116 (312)
T 3jr1_A          106 SFLLLEALNKS  116 (312)
T ss_dssp             EEEEEECCCCC
T ss_pred             eEEEEEeccCC
Confidence            99999999974

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.74  E-value=0.0054  Score=62.41  Aligned_cols=28  Identities=14%  Similarity=0.088  Sum_probs=24.4

Q ss_pred             CeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          168 ILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       168 IiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++|+|+.|.||+ ..++.+.|+||..+..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            899999999999 6677889999997754

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.43  E-value=0.056  Score=54.99  Aligned_cols=145  Identities=15%  Similarity=0.137  Sum_probs=74.3

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCC-chhHHHHHHHHHHHHHHHc-cCCCceeEeE-E--EEE
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV-KEDRMRVLLERLNDLFLKC-QGVEGICWLQ-G--ISV  116 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~-~~~~~~~~~~~~~~~~l~~-~~h~nIv~l~-g--~~~  116 (620)
                      ...-.+.|+.|....+|+.....       + .+++|+.... .......+..... .+... ...|.++... |  +..
T Consensus        23 ~~~~~~~i~~G~~n~~~~v~~~~-------g-~~vlk~~~~~~~~~~l~~e~~~l~-~L~~~g~~vP~~~~~~~g~~~~~   93 (322)
T 2ppq_A           23 SLTSYKGIAEGVENSNFLLHTTK-------D-PLILTLYEKRVEKNDLPFFLGLMQ-HLAAKGLSCPLPLPRKDGELLGE   93 (322)
T ss_dssp             CEEEEEEECC---EEEEEEEESS-------C-CEEEEEECC---CCHHHHHHHHHH-HHHHTTCCCCCBCCBTTCCSCEE
T ss_pred             cceEeeccCCCcccceEEEEeCC-------c-cEEEEEeCCCCCHHHHHHHHHHHH-HHHHCCCCCCcccCCCCCCEEEE
Confidence            44556778889999999986321       1 4889998762 2222222221111 11111 2233333210 1  123


Q ss_pred             ECCEEEEEEecCCCChH------------HHHHHh----cC--CC----CCHHHHHH---------------HHHHHHHH
Q 007046          117 INGKICIIMKFYEGSVG------------DRMAQL----KG--GK----LSLSNVFR---------------YAIDLAQG  159 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLl------------d~l~~~----~~--~~----l~~~~~~~---------------i~~qIa~g  159 (620)
                      ..+..+++|+|++|...            +.+.++    ..  .+    ........               +...+...
T Consensus        94 ~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~  173 (322)
T 2ppq_A           94 LSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPE  173 (322)
T ss_dssp             ETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHH
T ss_pred             ECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence            35778999999998421            111111    11  01    11110000               00124455


Q ss_pred             HHHHHH-------CCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          160 ILQLHS-------KGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       160 L~yLHs-------~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ++.+..       .+++|+|+.+.|||++.+..+.|+||+.+.
T Consensus       174 ~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          174 IDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            666653       258999999999999977656899999664

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.21  E-value=0.04  Score=55.48  Aligned_cols=78  Identities=9%  Similarity=-0.058  Sum_probs=45.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCC--CceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGV--EGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h--~nIv~l~g~~~~~  118 (620)
                      ....-.+.+|.|..+.||+.+.       .+++.|.+|+........ ...++.+...+..+...  -.+++++.+  ..
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-------~DG~~~~vK~~~~~~~~~-~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~   84 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-------ADGTPLFVKALPDDAPAL-DGLFRAEALGLDWLGRSFGSPVPQVAGW--DD   84 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-------TTSCEEEEEECCTTCCCC-TTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-------CCCCEEEEEEeCCCCcch-hhHHHHHHHHHHHHHhhCCCCcceEEec--cC
Confidence            3466778999999999999974       234579999875433211 11122222222222222  124555544  23


Q ss_pred             CEEEEEEecCCC
Q 007046          119 GKICIIMKFYEG  130 (620)
Q Consensus       119 ~~~~IVmE~~~G  130 (620)
                        -++||||+.+
T Consensus        85 --~~lv~e~l~~   94 (288)
T 3f7w_A           85 --RTLAMEWVDE   94 (288)
T ss_dssp             --TEEEEECCCC
T ss_pred             --ceEEEEeecc
Confidence              3789999974

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.94  E-value=0.071  Score=54.37  Aligned_cols=28  Identities=11%  Similarity=-0.064  Sum_probs=24.4

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .++|+|+++.|||++ + .+.|+||+.+..
T Consensus       196 ~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             EECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            489999999999999 4 899999987653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.17  E-value=0.12  Score=53.44  Aligned_cols=31  Identities=13%  Similarity=0.130  Sum_probs=27.4

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      .++|+|+.+.||+++.++.+.|+||+.+...
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            5899999999999998888999999877643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.08  E-value=0.17  Score=54.35  Aligned_cols=78  Identities=14%  Similarity=0.060  Sum_probs=41.9

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCch-hHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEE
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKE-DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC  122 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~-~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~  122 (620)
                      -.+.|+.|--..||++.......+ ...+..+.+|+...... ....   . +...+..+..+.-.+++++.+.  +  .
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li---~-E~~~l~~L~~~g~~P~l~~~~~--~--g  148 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLV---A-ESVIFTLLSERHLGPKLYGIFS--G--G  148 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHH---H-HHHHHHHHHHTTSSSCEEEEET--T--E
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHH---H-HHHHHHHHHhCCCCCcEEEEeC--C--C
Confidence            356788898999999975421100 01235799999854222 2221   1 1112222222222356666543  2  3


Q ss_pred             EEEecCCC
Q 007046          123 IIMKFYEG  130 (620)
Q Consensus       123 IVmE~~~G  130 (620)
                      +||||++|
T Consensus       149 ~v~e~l~G  156 (429)
T 1nw1_A          149 RLEEYIPS  156 (429)
T ss_dssp             EEECCCCE
T ss_pred             EEEEEeCC
Confidence            89999987

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=94.66  E-value=0.49  Score=51.27  Aligned_cols=77  Identities=12%  Similarity=0.070  Sum_probs=40.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.+. .+.|+.|--..+|++....      .+..+++|+.......-..  ...+...+..+..+.-.+++++.+  .+ 
T Consensus       109 ~~~~-i~~lsgG~tN~~y~v~~~~------~~~~~vLRi~g~~~~~~id--R~~E~~vl~~L~~~gl~P~ll~~~--~~-  176 (458)
T 2qg7_A          109 DSLE-FQIINGGITNILIKVKDMS------KQAKYLIRLYGPKTDEIIN--REREKKISCILYNKNIAKKIYVFF--TN-  176 (458)
T ss_dssp             TTEE-EEEECC--CEEEEEEEETT------TTEEEEEEEECC-CCSCSC--HHHHHHHHHHHTTSSSBCCEEEEE--TT-
T ss_pred             cCeE-EEEcCCCeEeEEEEEEECC------CCceEEEEECCCChhhhcC--HHHHHHHHHHHHhcCCCCCEEEEe--CC-
Confidence            4444 4678889999999997532      1246899987543211100  012222222222333346677766  22 


Q ss_pred             EEEEEecCCC
Q 007046          121 ICIIMKFYEG  130 (620)
Q Consensus       121 ~~IVmE~~~G  130 (620)
                       .+||||++|
T Consensus       177 -G~v~e~I~G  185 (458)
T 2qg7_A          177 -GRIEEFMDG  185 (458)
T ss_dssp             -EEEEECCCS
T ss_pred             -eEEEEeeCC
Confidence             259999987

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.63  E-value=0.1  Score=53.49  Aligned_cols=32  Identities=13%  Similarity=0.000  Sum_probs=27.2

Q ss_pred             CCCeeecccCCcEEEccC----CcEEEeccCCcccc
Q 007046          166 KGILVLNLKPFNFILNEA----DRAVLGDVGIPHLL  197 (620)
Q Consensus       166 ~gIiHrDLKP~NILld~~----~~vkL~DFGla~~~  197 (620)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+..-
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            369999999999999874    67899999987653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=94.61  E-value=0.13  Score=53.74  Aligned_cols=29  Identities=17%  Similarity=-0.003  Sum_probs=23.9

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .++|+|+.+.|||++.+. +.|+||..+..
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            489999999999998554 89999987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.52  E-value=0.16  Score=53.73  Aligned_cols=150  Identities=15%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCC-cCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLST-EDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~-ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .+.+++ +.|..|--..+|++...... .....++.|.+|+....... ..... ++..++..+..+.-..++++++.  
T Consensus        50 ~~~l~v-~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~-~~~~~-rE~~vl~~L~~~gv~P~ll~~~~--  124 (379)
T 3feg_A           50 PEELRV-YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG-VDSLV-LESVMFAILAERSLGPQLYGVFP--  124 (379)
T ss_dssp             GGGCCC-EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC-HHHHH-HHHHHHHHHHHTTSSCCEEEEET--
T ss_pred             cCceEE-EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch-HHHHH-HHHHHHHHHHhcCCCCeEEEEcC--
Confidence            445553 56777888889998753210 00112357999986432111 11111 22222222222222356666553  


Q ss_pred             CEEEEEEecCCCChH---------------HHHHHhcCC------CCC--HHHHHHHHHHHHH-----------------
Q 007046          119 GKICIIMKFYEGSVG---------------DRMAQLKGG------KLS--LSNVFRYAIDLAQ-----------------  158 (620)
Q Consensus       119 ~~~~IVmE~~~GsLl---------------d~l~~~~~~------~l~--~~~~~~i~~qIa~-----------------  158 (620)
                      +  .+||||++|..+               +.+.++...      ...  +..+.++..++..                 
T Consensus       125 ~--g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  202 (379)
T 3feg_A          125 E--GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL  202 (379)
T ss_dssp             T--EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred             C--ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence            3  289999987321               112222111      111  3445555544422                 


Q ss_pred             --HHHHHH----HC----CCeeecccCCcEEEccC----CcEEEeccCCccc
Q 007046          159 --GILQLH----SK----GILVLNLKPFNFILNEA----DRAVLGDVGIPHL  196 (620)
Q Consensus       159 --gL~yLH----s~----gIiHrDLKP~NILld~~----~~vkL~DFGla~~  196 (620)
                        .+..|.    ..    .++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              233333    22    48999999999999876    7899999997653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=88.18  E-value=1.2  Score=47.80  Aligned_cols=29  Identities=10%  Similarity=0.084  Sum_probs=25.6

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            3899999999999 7788999999998754

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=87.37  E-value=1.8  Score=45.60  Aligned_cols=29  Identities=17%  Similarity=0.159  Sum_probs=24.6

Q ss_pred             CeeecccCCcEEE------ccCCcEEEeccCCccc
Q 007046          168 ILVLNLKPFNFIL------NEADRAVLGDVGIPHL  196 (620)
Q Consensus       168 IiHrDLKP~NILl------d~~~~vkL~DFGla~~  196 (620)
                      ++|.|+.+.|||+      +++..+.++||-.|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999999      3457799999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	620
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-41
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-40
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-40
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-39
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-38
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-38
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-37
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-37
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-36
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-36
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-36
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-36
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-35
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-35
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-35
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-35
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-35
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-35
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-35
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-35
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-35
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-35
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-34
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-34
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-34
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-34
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-34
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-34
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-34
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-33
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-33
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-32
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-32
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-32
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-31
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-31
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-31
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-30
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-30
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-29
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-29
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-29
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-29
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-28
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-28
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-27
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-27
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-27
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-27
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-26
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-26
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-25
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-25
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-23
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-22
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-22
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-22
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-20
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-20
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-19
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-17
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-07

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  149 bits (377), Expect = 5e-41
 Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 15/259 (5%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVE 106
            IG G FG V+ A    ++E       VA+K +    +       + + ++ FL+     
Sbjct: 22  EIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
                +G  +      ++M++  GS  D + ++    L    +        QG+  LHS 
Sbjct: 76  NTIQYRGCYLREHTAWLVMEYCLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSH 134

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  ++K  N +L+E     LGD G   ++       +     +GTP +MAPE      
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANSFVGTPYWMAPEVILAMD 187

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
            G    + D W    + IE+     P    +       + + +              N +
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 247

Query: 287 LGCFEYDLRSRPLMTDILR 305
             C +   + RP    +L+
Sbjct: 248 DSCLQKIPQDRPTSEVLLK 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (368), Expect = 2e-40
 Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 18/263 (6%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKC 102
           ++   +G+G FG V+LA    S         +A+K+L   + ++  V  +   ++     
Sbjct: 9   EIGRPLGKGKFGNVYLAREKQSKF------ILALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
                I  L G      ++ +I+++       R  Q K  K        Y  +LA  +  
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSY 121

Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW 222
            HSK ++  ++KP N +L  A    + D G       +  PSS      GT +Y+ PE  
Sbjct: 122 CHSKRVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPPEMI 176

Query: 223 QPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
           +         + D W       E L G  P    +  E Y  + R +     P  +    
Sbjct: 177 E---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--FTFPDFVTEGA 231

Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
            +++    +++   RP++ ++L 
Sbjct: 232 RDLISRLLKHNPSQRPMLREVLE 254

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 2e-40
 Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 16/278 (5%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W I    + +  RIG G FG V+    +          +VAVK+L+       ++   + 
Sbjct: 3   WEIPDGQITVGQRIGSGSFGTVYKGKWH---------GDVAVKMLNVTAPTPQQLQAFKN 53

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
               L+      I    G S    ++ I+ ++ EGS       +   K  +  +   A  
Sbjct: 54  EVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
            AQG+  LH+K I+  +LK  N  L+E     +GD G+  +       S    +  G+  
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK-SRWSGSHQFEQLSGSIL 171

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-- 273
           +MAPE  + + + P SF++D + F   + E++TG  P    +  +    +V R  + P  
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231

Query: 274 --IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             + S  P A++ ++  C +     RPL   IL   + 
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 1e-39
 Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 9/273 (3%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I    L+L  ++G G FG V        +    +   VAVK L P    +   + + + +
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPS---GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 98  L-FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
           +  +       +  L G+ V+   + ++ +           +   G   L  + RYA+ +
Sbjct: 62  VNAMHSLDHRNLIRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           A+G+  L SK  +  +L   N +L   D   +GD G+   L            R     +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE  +       S  +D+W F  ++ EM T G +P  G +  +I   + +  E  P P
Sbjct: 181 CAPESLK---TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP 237

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
              P  + NV++ C+ +    RP    +     
Sbjct: 238 EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (355), Expect = 1e-38
 Identities = 48/269 (17%), Positives = 86/269 (31%), Gaps = 17/269 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I P  L     +G G FG V         +       VA+K++          + E    
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRGQYD-------VAIKMIKEGSMSEDEFIEEAKVM 53

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           + L     E +  L G+      I II ++          +    +     +     D+ 
Sbjct: 54  MNLSH---EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 110

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
           + +  L SK  L  +L   N ++N+     + D G+   +L     SS          + 
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWS 168

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
            PE          S ++D W F   + E+ + G  P    +  E  + + +       P 
Sbjct: 169 PPEVLM---YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYRPH 224

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                V  ++  C+      RP    +L 
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFKILLS 253

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 3e-38
 Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 6/272 (2%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS +  +  IG G FGEV+       T    +   VA+K L     ++ RV       
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGML--KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 61

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           +  +      I  L+G+      + II ++ E    D+  + K G+ S+  +      +A
Sbjct: 62  IMGQFSH-HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA 120

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
            G+  L +   +  +L   N ++N      + D G+  +L   P  +           + 
Sbjct: 121 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
           APE          +  +D W F   + E++T  +       +      +      P P  
Sbjct: 181 APEAIS---YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD 237

Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P A+  +++ C++ +   RP   DI+ +   
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDK 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 2e-37
 Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 14/265 (5%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           ++   +G G FG+V+ A +  ++         A K++    E+ +   +  ++   L   
Sbjct: 15  EIIGELGDGAFGKVYKAQNKETSV------LAAAKVIDTKSEEELEDYMVEID--ILASC 66

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               I  L         + I+++F  G   D +       L+ S +          +  L
Sbjct: 67  DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           H   I+  +LK  N +        L D G+                 +GTP +MAPE   
Sbjct: 127 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---TIQRRDSFIGTPYWMAPEVVM 183

Query: 224 PEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPP 280
            E     P  ++ D W    ++IEM     P    +   +   + + +      PS    
Sbjct: 184 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS 243

Query: 281 AVENVLLGCFEYDLRSRPLMTDILR 305
             ++ L  C E ++ +R   + +L+
Sbjct: 244 NFKDFLKKCLEKNVDARWTTSQLLQ 268

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 4e-37
 Identities = 56/315 (17%), Positives = 112/315 (35%), Gaps = 29/315 (9%)

Query: 19  DDSDHLRTAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAV 77
            D+++             W      L+    +G G FG+V  AT Y  ++      +VAV
Sbjct: 14  SDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI-QVAV 72

Query: 78  KILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRM 136
           K+L    +   R  L     +  +    E I  L G   ++G I +I ++   G + + +
Sbjct: 73  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 132

Query: 137 AQLKG---------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKP 175
              +                        L+  ++  +A  +A+G+  L  K  +  +L  
Sbjct: 133 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 192

Query: 176 FNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 235
            N ++       + D G+   ++                 +MAPE       G  + ++D
Sbjct: 193 RNVLVTHGKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLF---EGIYTIKSD 248

Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
            W +   + E+ + GV P  G  VD  +  +++       P      +  ++  C+ +D 
Sbjct: 249 VWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDS 308

Query: 295 RSRPLMTDILRVFKS 309
           R RP   ++      
Sbjct: 309 RKRPSFPNLTSFLGC 323

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-36
 Identities = 48/262 (18%), Positives = 94/262 (35%), Gaps = 11/262 (4%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
           +G G FG V    +        +  +VA+K+L    E      + R   +  +      I
Sbjct: 17  LGCGNFGSVRQGVY----RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-PYI 71

Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
             L G+      + ++M+   G    +    K  ++ +SNV      ++ G+  L  K  
Sbjct: 72  VRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 130

Query: 169 LVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG 228
           +  +L   N +L     A + D G+   L       +          + APE        
Sbjct: 131 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---FR 187

Query: 229 PISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
             S  +D W +  ++ E L+ G +P       E+    + + +    P   PP +  ++ 
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-IEQGKRMECPPECPPELYALMS 246

Query: 288 GCFEYDLRSRPLMTDILRVFKS 309
            C+ Y    RP    + +  ++
Sbjct: 247 DCWIYKWEDRPDFLTVEQRMRA 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 5e-36
 Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 19/273 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    LKL  R+G G FGEVW+  +   T+       VAVK L          L E   +
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLKQGSMSPDAFLAEA--N 60

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDL 156
           L  + Q  + +  L  + V    I II ++ E GS+ D +    G KL+++ +   A  +
Sbjct: 61  LMKQLQH-QRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           A+G+  +  +  +  +L+  N ++++     + D G+  L+      + +  +      +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIKW 176

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE       G  + ++D W F   + E++T G  P  G +  E+   + R       P
Sbjct: 177 TAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRP 232

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
              P  +  ++  C++     RP    +  V +
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 6e-36
 Identities = 50/272 (18%), Positives = 98/272 (36%), Gaps = 17/272 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I PS L     IG G FG V L    L+ +      +VA+K +          + E    
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYW-LNKD------KVAIKTIREGAMSEEDFIEEAE-- 52

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
             +       +  L G+ +    IC++ +F E        + + G  +   +    +D+ 
Sbjct: 53  -VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 111

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
           +G+  L    ++  +L   N ++ E     + D G+   +  +    +          + 
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWA 169

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           +PE +        S ++D W F   + E+ + G  P   RS  E+ + +         P 
Sbjct: 170 SPEVFS---FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPR 225

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
                V  ++  C++     RP  + +LR   
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 7e-36
 Identities = 56/291 (19%), Positives = 101/291 (34%), Gaps = 23/291 (7%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
              + L     +G G FG+V  AT Y   +  D    VAVK+L P      R  L     
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPSAHLTEREALMSELK 78

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEG-----------------SVGDRMAQLK 140
           +         I  L G   I G   +I ++                         + +  
Sbjct: 79  VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 200
              L L ++  ++  +A+G+  L SK  +  +L   N +L       + D G+   +   
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198

Query: 201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVD 259
                    R     +MAPE          +FE+D W +   + E+ +       G  VD
Sbjct: 199 SNYVVKGNAR-LPVKWMAPESIF---NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254

Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
             +  +++       P   P  + +++  C++ D   RP    I+++ +  
Sbjct: 255 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (337), Expect = 1e-35
 Identities = 47/263 (17%), Positives = 95/263 (36%), Gaps = 17/263 (6%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
               +IG+G  G V+ A    + +      EVA++ ++  ++ +  +++  +    ++  
Sbjct: 23  TRFEKIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEIL--VMREN 74

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               I       ++  ++ ++M++  G  G     +    +    +     +  Q +  L
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAG--GSLTDVVTETCMDEGQIAAVCRECLQALEFL 132

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS  ++  ++K  N +L       L D G       I    S     +GTP +MAPE   
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKRSTMVGTPYWMAPEVVT 189

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAV 282
              R     + D W      IEM+ G  P    +       +          P  L    
Sbjct: 190 ---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246

Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
            + L  C + D+  R    ++L+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  133 bits (335), Expect = 1e-35
 Identities = 59/278 (21%), Positives = 96/278 (34%), Gaps = 30/278 (10%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----------VKEDRMRVLLE 93
           + +  +GRG    V    H  + +      E AVKI+            V+E R   L E
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCK------EYAVKIIDVTGGGSFSAEEVQELREATLKE 59

Query: 94  RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRY 152
              D+  K  G   I  L+     N    ++    + G + D +   +   LS     + 
Sbjct: 60  V--DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKI 115

Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
              L + I  LH   I+  +LKP N +L++     L D G    L     P   L    G
Sbjct: 116 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGEKLREVCG 171

Query: 213 TPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
           TP+Y+APE  +  +         E D W     +  +L G  P   R    +   ++   
Sbjct: 172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 231

Query: 270 EIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                P        V++++        + R    + L 
Sbjct: 232 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  133 bits (335), Expect = 1e-35
 Identities = 54/274 (19%), Positives = 111/274 (40%), Gaps = 17/274 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           ++ + + ++H++G G +GEV+       +        VAVK L     +    L E    
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKKYSL------TVAVKTLKEDTMEVEEFLKEAA-- 65

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDL 156
             +K      +  L G+        II +F   G++ D + +    ++S   +   A  +
Sbjct: 66  -VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 124

Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           +  +  L  K  +  +L   N ++ E     + D G+  L+ G    +           +
Sbjct: 125 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA--GAKFPIKW 182

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 275
            APE          S ++D W F   + E+ T G+ P  G  + ++Y+ ++ +      P
Sbjct: 183 TAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERP 238

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            G P  V  ++  C++++   RP   +I + F++
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  133 bits (336), Expect = 1e-35
 Identities = 54/274 (19%), Positives = 104/274 (37%), Gaps = 11/274 (4%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I  S +K+   IG G FGEV      L  +       VA+K L     ++ R        
Sbjct: 23  IDISCVKIEQVIGAGEFGEVCSGHLKLPGKR---EIFVAIKTLKSGYTEKQRRDFLSEAS 79

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           +  +      +  L+G+   +  + II +F E    D   +   G+ ++  +      +A
Sbjct: 80  IMGQFDH-PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 138

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL--GIPLPSSDLPRRLGTPN 215
            G+  L     +  +L   N ++N      + D G+   L         +          
Sbjct: 139 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 198

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
           + APE  Q       +  +D W +   + E+++ G +P    +  ++ +A+ +   +PP 
Sbjct: 199 WTAPEAIQ---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP- 254

Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           P   P A+  ++L C++ D   RP    I+    
Sbjct: 255 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 2e-35
 Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 28/283 (9%)

Query: 37  WIKPSALKLRHR-IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV----- 90
           ++    L L  + +G G FG V    +    +       VAVKIL     D         
Sbjct: 2   YLDRKLLTLEDKELGSGNFGTVKKGYY----QMKKVVKTVAVKILKNEANDPALKDELLA 57

Query: 91  ---LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLS 147
              ++++L++ ++    + GIC             ++M+  E    ++  Q +   +   
Sbjct: 58  EANVMQQLDNPYIVR--MIGICE-------AESWMLVMEMAELGPLNKYLQ-QNRHVKDK 107

Query: 148 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDL 207
           N+      ++ G+  L     +  +L   N +L     A + D G+   L          
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167

Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
                   + APE          S ++D W F   + E  + G +P  G    E+    +
Sbjct: 168 THGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-L 223

Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            + E    P+G P  + +++  C+ YD+ +RP    +    ++
Sbjct: 224 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 3e-35
 Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 20/277 (7%)

Query: 36  AW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
           AW I   +L+L  ++G+G FGEVW+ T        +    VA+K L P        L E 
Sbjct: 11  AWEIPRESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMSPEAFLQEA 63

Query: 95  LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
                +K    E +  L  + V    I I+ ++   GS+ D +    G  L L  +   A
Sbjct: 64  Q---VMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 119

Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGT 213
             +A G+  +     +  +L+  N ++ E     + D G+  L+      +         
Sbjct: 120 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ--GAKFP 177

Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 272
             + APE       G  + ++D W F   + E+ T G  P  G    E+ D V R     
Sbjct: 178 IKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-M 233

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           P P   P ++ +++  C+  +   RP    +    + 
Sbjct: 234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (334), Expect = 3e-35
 Identities = 58/318 (18%), Positives = 113/318 (35%), Gaps = 19/318 (5%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K +  K    +G G FG V+        E       VA+K L      +    +     
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI--PVAIKELREATSPKANKEILDEAY 63

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           +         +C L GI  +   + +I +           +     +    +  + + +A
Sbjct: 64  VMASVDN-PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
           +G+  L  + ++  +L   N ++       + D G+  LL                  +M
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKWM 180

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           A E          + ++D W +  ++ E++T G +P  G    EI   ++ + E  P P 
Sbjct: 181 ALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQPP 236

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG-------GWTGHGSRILPDKSSSGY 329
                V  +++ C+  D  SRP   +++  F              G     LP  + S +
Sbjct: 237 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 296

Query: 330 TEWFLSKEDLKVDDVVRS 347
               + +ED+  DDVV +
Sbjct: 297 YRALMDEEDM--DDVVDA 312

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 4e-35
 Identities = 53/283 (18%), Positives = 111/283 (39%), Gaps = 17/283 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +    + +   +G+G FG V+        +D  E   VA+K ++     R R+       
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEAS 75

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKG--------GKLSLSN 148
           +  +      +  L G+        +IM+    G +   +  L+            SLS 
Sbjct: 76  VMKEFNCHHVVRLL-GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 208
           + + A ++A G+  L++   +  +L   N ++ E     +GD G+   +           
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGG 193

Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVR 267
           + L    +M+PE  +    G  +  +D W F   + E+ T  + P  G S +++   V+ 
Sbjct: 194 KGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250

Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD 310
              +   P   P  +  ++  C++Y+ + RP   +I+   K +
Sbjct: 251 -GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 6e-35
 Identities = 53/263 (20%), Positives = 96/263 (36%), Gaps = 12/263 (4%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            L   +G G +GEV LA + ++ E       VAVKI+   +       +++   +     
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLN 61

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
             E +    G         + +++  G       +     +   +  R+   L  G++ L
Sbjct: 62  H-ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYL 119

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           H  GI   ++KP N +L+E D   + D G+   +         L +  GT  Y+APE  +
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLK 178

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAV 282
              R   +   D W     +  ML G  P    S   + Y     ++        +  A 
Sbjct: 179 R--REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236

Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
             +L      +  +R  + DI +
Sbjct: 237 LALLHKILVENPSARITIPDIKK 259

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 6e-35
 Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 12/273 (4%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           I+   ++L   IG G FG+V    +       +    VA+K       D +R    +   
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
              +      I  L G+ +    + IIM+           Q++   L L+++  YA  L+
Sbjct: 61  TMRQFDH-PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118

Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 217
             +  L SK  +  ++   N +++  D   LGD G+   +       +   +      +M
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWM 176

Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           APE          +  +D W F   + E+L  GV+P  G   +++   +    E  P+P 
Sbjct: 177 APESIN---FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 232

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             PP + +++  C+ YD   RP  T++     +
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 265

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 1e-34
 Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 24/275 (8%)

Query: 37  W-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           W +    LKL   IG+G FG+V L  +          ++VAVK +          L E  
Sbjct: 2   WALNMKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKN-DATAQAFLAEAS 52

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI 154
               L+   +  +  L  I    G + I+ ++   GS+ D +       L    + ++++
Sbjct: 53  VMTQLRHSNL--VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 110

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
           D+ + +  L     +  +L   N +++E + A + D G+          SS         
Sbjct: 111 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPV 164

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP 273
            + APE  +       S ++D W F   + E+ + G  P     + ++    V +     
Sbjct: 165 KWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMD 220

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
            P G PPAV  V+  C+  D   RP    +    +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  130 bits (328), Expect = 1e-34
 Identities = 57/275 (20%), Positives = 102/275 (37%), Gaps = 22/275 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLK 101
           +L   +G G   EV LA             +VAVK+L     ++    +   R       
Sbjct: 10  ELGEILGFGGMSEVHLARDLRLHR------DVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 102 CQG---VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
                 V      +  +       I+M++ +G     +     G ++         D  Q
Sbjct: 64  LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQ 122

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
            +   H  GI+  ++KP N +++  +   + D GI   +       +     +GT  Y++
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPS 276
           PEQ +      +   +D +   C + E+LTG  P  G S   +    VR   IPP     
Sbjct: 183 PEQAR---GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239

Query: 277 GLPPAVENVLLGCFEYDLRSRP-----LMTDILRV 306
           GL   ++ V+L     +  +R      +  D++RV
Sbjct: 240 GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 274

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 2e-34
 Identities = 48/287 (16%), Positives = 93/287 (32%), Gaps = 28/287 (9%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +  + +K +  IG G FG+V  A      +      + A+K +                +
Sbjct: 7   LDWNDIKFQDVIGEGNFGQVLKARI----KKDGLRMDAAIKRMKEYASKDDHRDFAGELE 62

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEG---------------SVGDRMAQLKGG 142
           +  K      I  L G     G + + +++                       +A     
Sbjct: 63  VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 122

Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 202
            LS   +  +A D+A+G+  L  K  +  +L   N ++ E   A + D G+         
Sbjct: 123 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG----QE 178

Query: 203 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEI 261
                        +MA E          +  +D W +   + E+++    P CG +  E+
Sbjct: 179 VYVKKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 235

Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           Y+  + +      P      V +++  C+      RP    IL    
Sbjct: 236 YEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 2e-34
 Identities = 54/271 (19%), Positives = 97/271 (35%), Gaps = 24/271 (8%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLF 99
           LK    IGRG F  V+      +T       EVA   L      K +R R   E      
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTV------EVAWCELQDRKLTKSERQRFKEEAEMLKG 64

Query: 100 LKC-QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
           L+    V      +        I ++ +           + +   + +  +  +   + +
Sbjct: 65  LQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILK 123

Query: 159 GILQLHSKGILVL--NLKPFNFILNEAD-RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           G+  LH++   ++  +LK  N  +        +GD+G+  L       +S     +GTP 
Sbjct: 124 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK-----RASFAKAVIGTPE 178

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPI 274
           +MAPE +            D + F   ++EM T   P    ++  +IY  V    +    
Sbjct: 179 FMAPEMY----EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 234

Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                P V+ ++ GC   +   R  + D+L 
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  130 bits (329), Expect = 4e-34
 Identities = 57/315 (18%), Positives = 107/315 (33%), Gaps = 21/315 (6%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            +   +G G FG V   T   +          A K +    E     + + +    +   
Sbjct: 29  DIHEELGTGAFGVVHRVTERATGN------NFAAKFVMTPHESDKETVRKEIQ--TMSVL 80

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               +  L      + ++ +I +F  G         +  K+S      Y   + +G+  +
Sbjct: 81  RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 140

Query: 164 HSKGILVLNLKPFNFILN--EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
           H    + L+LKP N +     ++   L D G+   L     P   +    GT  + APE 
Sbjct: 141 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEV 196

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLP 279
            +     P+ + TD W        +L+G+ P  G + DE    V            SG+ 
Sbjct: 197 AE---GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS 253

Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGGWTGHGSRILPDKSSSGYTEWFLSKED 338
              ++ +      D  +R  +   L   + + G   G  S+I P    +   +   +K D
Sbjct: 254 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI-PSSRYTKIRDSIKTKYD 312

Query: 339 LKVDDVVRSRKPPNS 353
              + +    +  N 
Sbjct: 313 AWPEPLPPLGRISNY 327

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  129 bits (324), Expect = 7e-34
 Identities = 55/290 (18%), Positives = 103/290 (35%), Gaps = 31/290 (10%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           ++    IG G FG V+ A         + +  VAVK+L       M+   +R   L  + 
Sbjct: 15  IEYVRDIGEGAFGRVFQARA-PGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 103 QGVEGICWLQGISVINGKICIIMKFYEG-----------------------SVGDRMAQL 139
                +  L G+  +   +C++ ++                          S   R++  
Sbjct: 74  DNPNIVKLL-GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 199
               LS +     A  +A G+  L  +  +  +L   N ++ E     + D G+   +  
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 192

Query: 200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
                +D         +M PE          + E+D W +   + E+ + G+QP  G + 
Sbjct: 193 ADYYKAD-GNDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248

Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           +E+   V R   I   P   P  + N++  C+      RP    I R+ +
Sbjct: 249 EEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 9e-34
 Identities = 56/295 (18%), Positives = 106/295 (35%), Gaps = 23/295 (7%)

Query: 33  DTNAW-IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           D + W      LKL   +GRG FG+V  A  +   +       VAVK+L           
Sbjct: 4   DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHRA 62

Query: 92  LERLNDLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEG---------------SVGDR 135
           L     + +       +  L G      G + +I++F +                     
Sbjct: 63  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 122

Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH 195
              L    L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D G+  
Sbjct: 123 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 182

Query: 196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRC 254
            +   P              +MAPE          + ++D W F   + E+ +    P  
Sbjct: 183 DIYKDP-DYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGASPYP 238

Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           G  +DE +   ++       P    P +   +L C+  +   RP  ++++    +
Sbjct: 239 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  129 bits (324), Expect = 2e-33
 Identities = 56/268 (20%), Positives = 98/268 (36%), Gaps = 23/268 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLNDLFLKC 102
            +   +G G FG V       +            K ++ P   D+  V  E    +  + 
Sbjct: 32  DILEELGSGAFGVVHRCVEKATGR------VFVAKFINTPYPLDKYTVKNEI--SIMNQL 83

Query: 103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                +  L        ++ +I++F   G + DR+A  +  K+S + V  Y     +G+ 
Sbjct: 84  HH-PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLK 141

Query: 162 QLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
            +H   I+ L++KP N +    +A    + D G+   L     P   +     T  + AP
Sbjct: 142 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPDEIVKVTTATAEFAAP 197

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG 277
           E      R P+ F TD W        +L+G+ P  G    E    V R          S 
Sbjct: 198 EIVD---REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS 254

Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDILR 305
           + P  ++ +    + + R R  + D L 
Sbjct: 255 VSPEAKDFIKNLLQKEPRKRLTVHDALE 282

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (316), Expect = 6e-33
 Identities = 54/288 (18%), Positives = 104/288 (36%), Gaps = 22/288 (7%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEY-HEVAVKILHPVKEDRMRVLLERLN 96
           +    L L   +G G FG+V LA      +D      +VAVK+L     ++    L    
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69

Query: 97  DLFLKCQGVEGICWLQGISVINGKICIIMKFYEG---------------SVGDRMAQLKG 141
           ++       + I  L G    +G + +I+++                        +    
Sbjct: 70  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129

Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 201
            +LS  ++   A  +A+G+  L SK  +  +L   N ++ E +   + D G+   +  I 
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 202 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
                         +MAPE          + ++D W F   + E+ T G  P  G  V+E
Sbjct: 190 YYKK-TTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245

Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
           ++  +++       PS     +  ++  C+      RP    ++    
Sbjct: 246 LFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 1e-32
 Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 18/270 (6%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERL 95
            +P   K    +G G F  V LA    ++       E A+KIL    + ++     + R 
Sbjct: 5   KRPEDFKFGKILGEGSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRE 58

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAI 154
            D+  +         L      + K+   + + +   G+ +  + K G    +    Y  
Sbjct: 59  RDVMSRLDH-PFFVKLYFTFQDDEKLYFGLSYAKN--GELLKYIRKIGSFDETCTRFYTA 115

Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTP 214
           ++   +  LH KGI+  +LKP N +LNE     + D G    +L      +     +GT 
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARANSFVGTA 174

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI 274
            Y++PE             +D W   C I +++ G+ P    +   I+  +++ +     
Sbjct: 175 QYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--YDF 229

Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
           P    P   +++      D   R    ++ 
Sbjct: 230 PEKFFPKARDLVEKLLVLDATKRLGCEEME 259

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 1e-32
 Identities = 49/276 (17%), Positives = 105/276 (38%), Gaps = 11/276 (3%)

Query: 38  IKPSALKLR--HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
           I PS+L +     IGRG FG V+  T     ++  +    AVK L+ + +          
Sbjct: 22  IGPSSLIVHFNEVIGRGHFGCVYHGTL---LDNDGKKIHCAVKSLNRITDIGEVSQFLTE 78

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
             +         +  L       G   +++ + +        + +    ++ ++  + + 
Sbjct: 79  GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS-SDLPRRLGTP 214
           +A+G+  L SK  +  +L   N +L+E     + D G+   +      S  +        
Sbjct: 139 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP 273
            +MA E  Q       + ++D W F   + E++T G  P    +  +I   +++ +    
Sbjct: 199 KWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LL 254

Query: 274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
            P   P  +  V+L C+      RP  ++++    +
Sbjct: 255 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 4e-32
 Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 25/273 (9%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFL 100
           ++ + IG G +G           +       +  K L      + ++  ++ E      L
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGK------ILVWKELDYGSMTEAEKQMLVSEVNLLREL 60

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLA 157
           K   +        I   N  + I+M++ E G +   + +   +   L    V R    L 
Sbjct: 61  KHPNIVRYYDR-IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 119

Query: 158 QGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 212
             + + H +      +L  +LKP N  L+      LGD G+  +L      +S     +G
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVG 176

Query: 213 TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP 272
           TP YM+PEQ     R   + ++D W   C + E+   + P    S  E+   + R  +  
Sbjct: 177 TPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-REGKFR 232

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
            IP      +  ++          RP + +IL 
Sbjct: 233 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  123 bits (310), Expect = 7e-32
 Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 22/268 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
             R  +G G F EV LA    + +       VA+K +     +     +E    +  K +
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQK------LVAIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 104 GVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
               I  L  I    G + +IM+    G + DR+  ++ G  +  +  R    +   +  
Sbjct: 66  H-PNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKY 122

Query: 163 LHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           LH  GI+  +LKP N +    D   + ++ D G+  +      P S L    GTP Y+AP
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED----PGSVLSTACGTPGYVAP 178

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SG 277
           E      + P S   D W        +L G  P    +  ++++ +++ +     P    
Sbjct: 179 EVLA---QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 235

Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDILR 305
           +  + ++ +    E D   R      L+
Sbjct: 236 ISDSAKDFIRHLMEKDPEKRFTCEQALQ 263

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 1e-31
 Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 23/267 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLF 99
            L   +G+G FG+V+LA    + +        A+K L      + +D    ++E+   + 
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQ------FFAIKALKKDVVLMDDDVECTMVEK--RVL 56

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQ 158
                   +  +         +  +M++  G  GD M  ++   K  LS    YA ++  
Sbjct: 57  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFDLSRATFYAAEIIL 114

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
           G+  LHSKGI+  +LK  N +L++     + D G+        L  +      GTP+Y+A
Sbjct: 115 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN---MLGDAKTNTFCGTPDYIA 171

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
           PE          +   D W F   + EML G  P  G+  +E++ ++  R + P  P  L
Sbjct: 172 PEILL---GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWL 226

Query: 279 PPAVENVLLGCFEYDLRSRPLMTDILR 305
               +++L+  F  +   R  +   +R
Sbjct: 227 EKEAKDLLVKLFVREPEKRLGVRGDIR 253

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (303), Expect = 7e-31
 Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 22/267 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
            +   +GRG FG V       S +          K +     D++ V  E      L   
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKK------TYMAKFVKVKGTDQVLVKKEIS---ILNIA 58

Query: 104 GVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
               I  L        ++ +I +F  G  + +R+      +L+   +  Y   + + +  
Sbjct: 59  RHRNILHLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQF 117

Query: 163 LHSKGILVLNLKPFNFILNEADRAV--LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE 220
           LHS  I   +++P N I      +   + + G    L     P  +       P Y APE
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL----KPGDNFRLLFTAPEYYAPE 173

Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGL 278
             Q      +S  TD W     +  +L+G+ P    +  +I + ++  +          +
Sbjct: 174 VHQ---HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230

Query: 279 PPAVENVLLGCFEYDLRSRPLMTDILR 305
                + +      + +SR   ++ L+
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQ 257

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (303), Expect = 9e-31
 Identities = 46/273 (16%), Positives = 87/273 (31%), Gaps = 29/273 (10%)

Query: 45  LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKC 102
               +G G  G+V    +  + E      + A+K+L    + R  + +         +  
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQE------KFALKMLQDCPKARREVELHWRASQCPHI-- 67

Query: 103 QGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
             V  +   + +      + I+M+  + G +  R+        +          + + I 
Sbjct: 68  --VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125

Query: 162 QLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
            LHS  I   ++KP N +           L D G            + L     TP Y+A
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET----TSHNSLTTPCYTPYYVA 181

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------ 272
           PE   PE         D W     +  +L G  P        I   +  R  +       
Sbjct: 182 PEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 238

Query: 273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
           P  S +   V+ ++    + +   R  +T+ + 
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 1e-30
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 19/265 (7%)

Query: 38  IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
           +K    +    +G G  G V+  +H  S         +A K++H   +  +R  + R   
Sbjct: 3   LKDDDFEKISELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIKPAIRNQIIRELQ 56

Query: 98  LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
           +  +C     I    G    +G+I I M+  +G   D++ + K G++    + + +I + 
Sbjct: 57  VLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVI 114

Query: 158 QGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNY 216
           +G+  L  K  I+  ++KP N ++N      L D G     +   L  S     +GT +Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG-----VSGQLIDSMANSFVGTRSY 169

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 276
           M+PE+ Q       S ++D W    S++EM  G  P       E+   ++   ++    +
Sbjct: 170 MSPERLQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAA 224

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMT 301
             PP           Y + SRP M 
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMA 249

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  120 bits (302), Expect = 2e-30
 Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 21/261 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLF 99
            +   IGRG FGEV+      + +        A+K L      +K+     L ER+    
Sbjct: 7   SVHRIIGRGGFGEVYGCRKADTGK------MYAMKCLDKKRIKMKQGETLALNERIMLSL 60

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQ 158
           +       I  +        K+  I+    G  GD    L + G  S +++  YA ++  
Sbjct: 61  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIIL 118

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
           G+  +H++ ++  +LKP N +L+E     + D+G     L            +GT  YMA
Sbjct: 119 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACDFSKKKPHASVGTHGYMA 173

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-IPSG 277
           PE  Q  V        D +   C + ++L G  P       + ++       +   +P  
Sbjct: 174 PEVLQKGV--AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231

Query: 278 LPPAVENVLLGCFEYDLRSRP 298
             P + ++L G  + D+  R 
Sbjct: 232 FSPELRSLLEGLLQRDVNRRL 252

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 2e-29
 Identities = 43/270 (15%), Positives = 85/270 (31%), Gaps = 30/270 (11%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-------EDRMRVLLERLN 96
           ++   +G G FG V+                VA+K +   +        +  RV +E   
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNL------PVAIKHVEKDRISDWGELPNGTRVPMEV-- 58

Query: 97  DLFLKCQ-GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
            L  K   G  G+  L           +I++  E          + G L       +   
Sbjct: 59  VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           + + +   H+ G+L  ++K  N +++       G++ +     G  L  +      GT  
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNR----GELKLIDFGSGALLKDTVYTDFDGTRV 174

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
           Y  PE  +             W     + +M+ G  P          + ++R Q      
Sbjct: 175 YSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEH------DEEIIRGQ--VFFR 224

Query: 276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
             +    ++++  C       RP   +I  
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQN 254

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  116 bits (290), Expect = 2e-29
 Identities = 55/279 (19%), Positives = 96/279 (34%), Gaps = 26/279 (9%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +L  +IG G FG+++L T   + E      EVA+K+   VK    ++ +E    ++   Q
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGE------EVAIKLEC-VKTKHPQLHIES--KIYKMMQ 60

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           G  GI  +       G   +++    G   + +      K SL  V   A  +   I  +
Sbjct: 61  GGVGIPTI-RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119

Query: 164 HSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLL----LGIPLPSSDLPRRLGTPNY 216
           HSK  +  ++KP NF++          + D G+            +P  +     GT  Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179

Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE------ 270
            +            S   D       ++    G  P  G           R  E      
Sbjct: 180 ASINTHL---GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236

Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
           I  +  G P      L  C       +P  + + ++F++
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 275

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  115 bits (289), Expect = 3e-29
 Identities = 46/281 (16%), Positives = 87/281 (30%), Gaps = 28/281 (9%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           K+  RIG G FG ++  T+ L+ +      +VA+K      +      L      +    
Sbjct: 8   KVGRRIGEGSFGVIFEGTNLLNNQ------QVAIKFEPRRSDAPQ---LRDEYRTYKLLA 58

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
           G  GI  +           +++    G   + +  L G K S+  V   A  +   +  +
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVI-DLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 117

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL---------GIPLPSSDLPRRLGTP 214
           H K ++  ++KP NF++   +      + +    +            +P  +     GT 
Sbjct: 118 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---- 270
            YM+            S   D        +  L G  P  G           R  E    
Sbjct: 178 RYMSINTHL---GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 234

Query: 271 --IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             +  + +G P      +         + P    +  +F  
Sbjct: 235 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 275

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 4e-29
 Identities = 48/269 (17%), Positives = 84/269 (31%), Gaps = 18/269 (6%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLN---DL 98
                +G G F  V       +        + A K +     K  R  V  E +     +
Sbjct: 13  DTGEELGSGQFAVVKKCREKSTGL------QYAAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 99  FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
             + Q    +  L  +      + +I++   G         +   L+      +   +  
Sbjct: 67  LKEIQH-PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILN 124

Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMA 218
           G+  LHS  I   +LKP N +L + +        I   L       ++     GTP ++A
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184

Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPS 276
           PE        P+  E D W        +L+G  P  G +  E    V            S
Sbjct: 185 PEIVN---YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241

Query: 277 GLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                 ++ +      D + R  + D L+
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-28
 Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 43/300 (14%)

Query: 43  LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
           + L+  IG+G FGEVW               EVAVKI    +E       E    + L+ 
Sbjct: 5   IVLQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRH 56

Query: 103 QG-VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
           +  +  I      +    ++ ++  ++E   G     L    +++  + + A+  A G+ 
Sbjct: 57  ENILGFIAADNKDNGTWTQLWLVSDYHEH--GSLFDYLNRYTVTVEGMIKLALSTASGLA 114

Query: 162 QLHS--------KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP-RRLG 212
            LH           I   +LK  N ++ +     + D+G+              P  R+G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174

Query: 213 TPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGR------------- 256
           T  YMAPE     +           D +       E+                       
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234

Query: 257 --SVDEIYDAVVRRQEIPPIPSGL-----PPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
             SV+E+   V  ++  P IP+          +  ++  C+  +  +R     I +    
Sbjct: 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 7e-28
 Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 22/259 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP----VKEDRMRVLLERLNDLF 99
                +G+G FG+V L     +          A+KIL       K++    + E      
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGR------YYAMKILRKEVIIAKDEVAHTVTESR---V 58

Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
           L+      +  L+     + ++C +M++  G         +    +      Y  ++   
Sbjct: 59  LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  LHS+ ++  ++K  N +L++     + D G+    +      + +    GTP Y+AP
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS---DGATMKTFCGTPEYLAP 174

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP 279
           E  +           D WG    + EM+ G  P   +  + +++ ++  +     P  L 
Sbjct: 175 EVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLS 229

Query: 280 PAVENVLLGCFEYDLRSRP 298
           P  +++L G  + D + R 
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 5e-27
 Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 14/261 (5%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFL 100
           +L   +G G +G+V+L          D     A+K+L     V++ +          +  
Sbjct: 27  ELLKVLGTGAYGKVFLVRK---ISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGG-KLSLSNVFRYAIDLAQG 159
             +    +  L        K+ +I+ +  G  G+    L    + +   V  Y  ++   
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYING--GELFTHLSQRERFTEHEVQIYVGEIVLA 141

Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP 219
           +  LH  GI+  ++K  N +L+     VL D G+      +   +       GT  YMAP
Sbjct: 142 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF--VADETERAYDFCGTIEYMAP 199

Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QEIPPIPSG 277
           +  +    G      D W     + E+LTG  P            + RR  +  PP P  
Sbjct: 200 DIVRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 258

Query: 278 LPPAVENVLLGCFEYDLRSRP 298
           +    ++++      D + R 
Sbjct: 259 MSALAKDLIQRLLMKDPKKRL 279

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 7e-27
 Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 45/295 (15%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFL 100
           +    IG G +G+V+ A    +         VA+K +      +   +  + E      L
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 101 KCQGVEGICWLQGISVI-----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
           +      +  L  +  +       K+ ++ +  +  +   + ++    +    +      
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           L +G+  LHS  ++  +LKP N ++  + +  L D G+  +       +S     + T  
Sbjct: 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS----VVVTLW 180

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-------- 267
           Y APE      +   +   D W   C   EM        G S  +    ++         
Sbjct: 181 YRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237

Query: 268 -----------------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                             Q I    + +    +++LL C  ++   R      L 
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 7e-27
 Identities = 48/294 (16%), Positives = 93/294 (31%), Gaps = 42/294 (14%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
                IG G +G V  A   ++         VA+K + P +         R   + L+ +
Sbjct: 11  TNLSYIGEGAYGMVCSAYDNVNKV------RVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 104 G---VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
               +     ++  ++   K   ++    G   D    LK   LS  ++  +   + +G+
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMG--ADLYKLLKTQHLSNDHICYFLYQILRGL 122

Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE 220
             +HS  +L  +LKP N +LN      + D G+  +       +  L   + T  Y APE
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 182

Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------- 273
                     +   D W   C + EML+      G+   +  + ++     P        
Sbjct: 183 IMLNSK--GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 240

Query: 274 ----------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                                 +         ++L     ++   R  +   L 
Sbjct: 241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 9e-27
 Identities = 56/286 (19%), Positives = 95/286 (33%), Gaps = 41/286 (14%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER--LNDL-FLKCQGV 105
           +G G F  V+ A    + +       VA+K +        +  + R  L ++  L+    
Sbjct: 6   LGEGQFATVYKARDKNTNQ------IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 59

Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
             I  L         I ++  F E  +   +       L+ S++  Y +   QG+  LH 
Sbjct: 60  PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQ 118

Query: 166 KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE 225
             IL  +LKP N +L+E     L D G+         P+     ++ T  Y APE     
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKS---FGSPNRAYTHQVVTRWYRAPELLFG- 174

Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------ 273
                    D W   C + E+L  V    G S  +    +      P             
Sbjct: 175 -ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 233

Query: 274 --------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                         I S     + +++ G F ++  +R   T  L+
Sbjct: 234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (269), Expect = 2e-26
 Identities = 61/257 (23%), Positives = 99/257 (38%), Gaps = 21/257 (8%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND--LFLK 101
           ++   +G G FG V L     +          A+K+L      R++  +E  ND  L L 
Sbjct: 7   QILRTLGTGSFGRVHLIRSRHNGR------YYAMKVLKKEIVVRLK-QVEHTNDERLMLS 59

Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
                 I  + G      +I +IM + EG     + + K  +        YA ++   + 
Sbjct: 60  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALE 118

Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ 221
            LHSK I+  +LKP N +L++     + D G    +              GTP+Y+APE 
Sbjct: 119 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV------PDVTYTLCGTPDYIAPEV 172

Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
                  P +   D W F   I EML G  P    +  + Y+ ++  +     P      
Sbjct: 173 VS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNED 227

Query: 282 VENVLLGCFEYDLRSRP 298
           V+++L      DL  R 
Sbjct: 228 VKDLLSRLITRDLSQRL 244

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 5e-26
 Identities = 59/289 (20%), Positives = 90/289 (31%), Gaps = 38/289 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +   +IG G +G V+ A + L+ E       VA+K +    E              LK  
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKEL 58

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               I  L  +     K+ ++ +F    +   M       + L  +  Y   L QG+   
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS  +L  +LKP N ++N      L D G+        +P       + T  Y APE   
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILL 175

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---------------- 267
                  S   D W   C   EM+T      G S  +    + R                
Sbjct: 176 G--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233

Query: 268 -----------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                      RQ+   +   L     ++L     YD   R      L 
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (262), Expect = 3e-25
 Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 19/252 (7%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVE 106
            +G G FG V L  H  S          A+KIL   K  +++ +   LN+   L+     
Sbjct: 48  TLGTGSFGRVMLVKHKESGN------HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
            +  L+     N  + ++M++  G       + + G+ S  +   YA  +      LHS 
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSL 160

Query: 167 GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 226
            ++  +LKP N ++++     + D G                   GTP  +APE      
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGF------AKRVKGRTWTLCGTPEALAPEIIL--- 211

Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
               +   D W     I EM  G  P       +IY+ +V  +     PS     ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269

Query: 287 LGCFEYDLRSRP 298
               + DL  R 
Sbjct: 270 RNLLQVDLTKRF 281

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  103 bits (256), Expect = 5e-25
 Identities = 52/289 (17%), Positives = 88/289 (30%), Gaps = 40/289 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
               +IG G +G V+ A +       +     A+K +   KED             LK  
Sbjct: 5   HGLEKIGEGTYGVVYKAQN-------NYGETFALKKIRLEKEDEGIPSTTIREISILKEL 57

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
               I  L  +     ++ ++ +  +  +   +   +GG L       + + L  GI   
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYC 116

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           H + +L  +LKP N ++N      + D G+        +P       + T  Y AP+   
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLM 173

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---------- 273
                  S   D W   C   EM+ G     G S  +    + R    P           
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231

Query: 274 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                               GL  +  ++L    + D   R      L 
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 5e-23
 Identities = 57/308 (18%), Positives = 93/308 (30%), Gaps = 50/308 (16%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLERL 95
           +   +IG+G FGEV+ A H  + +      +VA+K +    E         R   +L+ L
Sbjct: 13  EKLAKIGQGTFGEVFKARHRKTGQ------KVALKKVLMENEKEGFPITALREIKILQLL 66

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
               +              +   G I ++  F E  +   ++     K +LS + R    
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQM 125

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL-LGIPLPSSDLPRRLGTP 214
           L  G+  +H   IL  ++K  N ++       L D G+     L      +    R+ T 
Sbjct: 126 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185

Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP- 273
            Y  PE    E         D WG  C + EM T      G +       + +       
Sbjct: 186 WYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243

Query: 274 -----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
                                              P   +++      D   R    D L
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303

Query: 305 R--VFKSD 310
               F SD
Sbjct: 304 NHDFFWSD 311

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 2e-22
 Identities = 56/308 (18%), Positives = 98/308 (31%), Gaps = 56/308 (18%)

Query: 35  NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV---- 90
            AW   +  +    +G G +G V  A    +        +VA+K L+   +  +      
Sbjct: 12  TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGA------KVAIKKLYRPFQSELFAKRAY 65

Query: 91  ----LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL 146
               LL+ +    +   G+  +              ++M F    +G  M   K  KL  
Sbjct: 66  RELRLLKHMRHENV--IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM---KHEKLGE 120

Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 206
             +      + +G+  +H+ GI+  +LKP N  +NE     + D G+           S+
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR------QADSE 174

Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
           +   + T  Y APE          +   D W   C + EM+TG     G    +    ++
Sbjct: 175 MTGYVVTRWYRAPEVILN--WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 232

Query: 267 RRQEIPP-----------------------------IPSGLPPAVENVLLGCFEYDLRSR 297
           +    PP                             I +   P   N+L      D   R
Sbjct: 233 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR 292

Query: 298 PLMTDILR 305
               + L 
Sbjct: 293 VTAGEALA 300

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 95.7 bits (237), Expect = 3e-22
 Identities = 53/313 (16%), Positives = 107/313 (34%), Gaps = 59/313 (18%)

Query: 32  NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
           +    W      +L  ++GRG + EV+ A +  + E      +V VKIL PVK+ +    
Sbjct: 26  SHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE------KVVVKILKPVKKKK---- 75

Query: 92  LERLNDLFLKCQGVEGICWLQGI--SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
           ++R   +    +G   I  L  I    ++    ++ +    +   ++ Q     L+  ++
Sbjct: 76  IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDI 131

Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLP 208
             Y  ++ + +   HS GI+  ++KP N +++   R + L D G+         P  +  
Sbjct: 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY----HPGQEYN 187

Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVR 267
            R+ +  +  PE           +  D W   C +  M+   +P   G    +    + +
Sbjct: 188 VRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245

Query: 268 -----------------------------------RQEIPPIPSGLPPAVENVLLGCFEY 292
                                              R         + P   + L     Y
Sbjct: 246 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 305

Query: 293 DLRSRPLMTDILR 305
           D +SR    + + 
Sbjct: 306 DHQSRLTAREAME 318

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.6 bits (237), Expect = 5e-22
 Identities = 51/289 (17%), Positives = 90/289 (31%), Gaps = 46/289 (15%)

Query: 49  IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLFLKCQGVE 106
           IG G FG V+ A    S E       VA+K +   K  + R   ++ +L+   +    + 
Sbjct: 28  IGNGSFGVVYQAKLCDSGE------LVAIKKVLQDKRFKNRELQIMRKLDHCNIVR--LR 79

Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLH 164
              +  G       + +++ +   +V             L +  V  Y   L + +  +H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139

Query: 165 SKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           S GI   ++KP N +L+     + L D G    L    +        + +  Y APE   
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVSYICSRYYRAPELIF 195

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---------- 273
                  +   D W   C + E+L G     G S  +    +++    P           
Sbjct: 196 GAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253

Query: 274 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                                 PP    +     EY   +R    +   
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (223), Expect = 1e-20
 Identities = 50/290 (17%), Positives = 92/290 (31%), Gaps = 40/290 (13%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
           +   +IG G +G V+ A +  + E       VA+K +    +D             LK  
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHE------IVALKRVRLDDDDEGVPSSALREICLLKEL 58

Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
             + I  L  +   + K+ ++ +F +  +        G       V  +   L +G+   
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFC 117

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ 223
           HS+ +L  +LKP N ++N      L + G+        +P       + T  Y  P+   
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARA---FGIPVRCYSAEVVTLWYRPPDVLF 174

Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDEIYDAVVRRQEIPP--------- 273
                  S   D W   C   E+    +P   G  VD+    + R    P          
Sbjct: 175 G--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232

Query: 274 ------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
                             +   L     ++L    + +   R    + L+
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 6e-20
 Identities = 47/238 (19%), Positives = 83/238 (34%), Gaps = 27/238 (11%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLERL 95
           +    IG G  G V  A   +          VA+K L    ++        R  VL++ +
Sbjct: 20  QNLKPIGSGAQGIVCAAYDAVLDR------NVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 96  NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
           N   +    +  +   Q        + ++M+  + +    + Q+   +L    +      
Sbjct: 74  NHKNIIS--LLNVFTPQKTLEEFQDVYLVMELMDAN----LCQVIQMELDHERMSYLLYQ 127

Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 215
           +  GI  LHS GI+  +LKP N ++       + D G    L      S  +   + T  
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG----LARTAGTSFMMTPYVVTRY 183

Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
           Y APE              D W   C + EM+       GR   + ++ V+ +   P 
Sbjct: 184 YRAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 5e-19
 Identities = 52/310 (16%), Positives = 93/310 (30%), Gaps = 56/310 (18%)

Query: 33  DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-- 90
           +   W  P   +    +G G +G V  A    +         VAVK L    +  +    
Sbjct: 10  NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL------RVAVKKLSRPFQSIIHAKR 63

Query: 91  ------LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKL 144
                 LL+ +    +   G+  +            + ++       + + +   K  KL
Sbjct: 64  TYRELRLLKHMKHENV--IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKL 118

Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 204
           +  +V      + +G+  +HS  I+  +LKP N  +NE     + D G+           
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH------TD 172

Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 264
            ++   + T  Y APE          +   D W   C + E+LTG     G    +    
Sbjct: 173 DEMTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

Query: 265 VVRRQEIPP-----------------------------IPSGLPPAVENVLLGCFEYDLR 295
           ++R    P                              +  G  P   ++L      D  
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290

Query: 296 SRPLMTDILR 305
            R      L 
Sbjct: 291 KRITAAQALA 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.5 bits (197), Expect = 6e-17
 Identities = 51/251 (20%), Positives = 85/251 (33%), Gaps = 24/251 (9%)

Query: 44  KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-----LLERLND- 97
            L  ++G G F  VWLA   ++         VA+KI+   K           LL+R+ND 
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVNNT------HVAMKIVRGDKVYTEAAEDEIKLLQRVNDA 69

Query: 98  -----LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKL-SLSNVFR 151
                  +    +  +         NG   +++    G     + +    +   L  V +
Sbjct: 70  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 129

Query: 152 YAIDLAQGILQLHSK-GILVLNLKPFNFILNEADR-AVLGDVGIPHLLLGIPLPSSDLPR 209
            +  L  G+  +H + GI+  ++KP N ++   D    L  + I  L             
Sbjct: 130 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-TN 188

Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
            + T  Y +PE        P     D W  AC I E++TG                    
Sbjct: 189 SIQTREYRSPEVLL---GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245

Query: 270 EIPPIPSGLPP 280
           +I  +   LP 
Sbjct: 246 QIIELLGELPS 256

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.5 bits (112), Expect = 9e-07
 Identities = 17/150 (11%), Positives = 54/150 (36%), Gaps = 12/150 (8%)

Query: 48  RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGV 105
            +G G    V+           +++ E  VK          +++   +  +  F      
Sbjct: 7   LMGEGKESAVFNCYS-------EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIR 59

Query: 106 EGICWLQGISVINGKICIIMKFYEGS--VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
                 + +  + G     +  +EG+  + + +   +  ++ + N       + + + + 
Sbjct: 60  SARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKF 119

Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVGI 193
           + +GI+  +L  +N +++E +   + D   
Sbjct: 120 YHRGIVHGDLSQYNVLVSE-EGIWIIDFPQ 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	620
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.85
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.02
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.48
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.73
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.03
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.76
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	93.8

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-52  Score=439.63  Aligned_cols=274  Identities=18%  Similarity=0.310  Sum_probs=230.9

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      |..++|++++.||+|+||.||+|+++.++      +.||||++++...   .....+..+.  .+++.++||||++++++
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~------~~~AiK~i~k~~~~~~~~~~~~~~E~--~il~~l~hp~Iv~l~~~   73 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATG------RYYAMKILRKEVIIAKDEVAHTVTES--RVLQNTRHPFLTALKYA   73 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHSCCCTTBCCEEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEchhhccCHHHHHHHHHHH--HHHHhCCCCCEEEEEee
Confidence            56789999999999999999999987766      4899999975432   1222233322  36677899999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.+++.+|||||||+| +|.+.+.  +.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+
T Consensus        74 ~~~~~~~~iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~  151 (337)
T d1o6la_          74 FQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             eccccccccceeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccc
Confidence            9999999999999995 5656554  456899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      |+....   ........+||+.|||||++.+.   +|+.++|+|||||++|||++|++||.+.+..++++.+....  ..
T Consensus       152 a~~~~~---~~~~~~~~~GT~~Y~aPE~~~~~---~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~--~~  223 (337)
T d1o6la_         152 CKEGIS---DGATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IR  223 (337)
T ss_dssp             CBCSCC---TTCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CC
T ss_pred             cccccc---CCcccccceeCHHHhhhhhccCC---CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC--CC
Confidence            987643   12334567899999999999754   68999999999999999999999999999999998887654  56


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      +|..+|+++++||.+||++||++|++     ++++++ .+....+|.....+...+|+.|..
T Consensus       224 ~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~  285 (337)
T d1o6la_         224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQV  285 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999994     889987 666777887777777777766653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-52  Score=422.20  Aligned_cols=247  Identities=21%  Similarity=0.326  Sum_probs=211.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|+++.++      +.||||++++.....  ......++. .+++.++||||+++++++.+
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~E~-~il~~l~hpnIv~~~~~~~~   77 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREV-EIQSHLRHPNILRLYGYFHD   77 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH-HHHHTCCCTTBCCEEEEEEC
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCC------cEEEEEEEchHHccChHHHHHHHHHH-HHHHhcCCCCCCeEEEEEEE
Confidence            468999999999999999999987665      489999997543221  112222222 36677899999999999999


Q ss_pred             CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++.+|||||||+ |+|.+.+.  +.+++++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus        78 ~~~~~ivmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~  155 (263)
T d2j4za1          78 ATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH  155 (263)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSC
T ss_pred             CCEEEEEEeecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeee
Confidence            999999999999 56666665  346799999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ...     ......+||+.|||||++.+.   +++.++|||||||++|||++|+.||.+.+..+++..+...  .+.+|.
T Consensus       156 ~~~-----~~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~  225 (263)
T d2j4za1         156 APS-----SRRTTLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPD  225 (263)
T ss_dssp             CCC-----CCCEETTEEGGGCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCT
T ss_pred             cCC-----CcccccCCCCcccCHHHHcCC---CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCc
Confidence            532     334456899999999999754   6889999999999999999999999999999998888654  355788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+|+++++||.+||++||++|||++|+++
T Consensus       226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         226 FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            89999999999999999999999999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-52  Score=428.92  Aligned_cols=268  Identities=19%  Similarity=0.282  Sum_probs=218.6

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..+.+++|++.+.||+|+||+||+|+++.++      +.||||++++...   .....+.+ +. .+++.++||||++++
T Consensus         3 ~~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~-E~-~il~~l~HpnIv~l~   74 (288)
T d1uu3a_           3 RKKRPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTR-ER-DVMSRLDHPFFVKLY   74 (288)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHH-HH-HHHHHCCSTTBCCEE
T ss_pred             CCCCCCCCEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEehHHccCHHHHHHHHH-HH-HHHHHcCCCCeeEEE
Confidence            3456789999999999999999999987765      4799999975332   11222223 22 256677999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++.+++.+|||||||+| +|.+++.  ..+.+++..+..++.||+.||+|||+++|+||||||+|||+++++.+||+||
T Consensus        75 ~~~~~~~~~~ivmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DF  152 (288)
T d1uu3a_          75 FTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF  152 (288)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred             EEEEECCEEEEEEEccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEeccc
Confidence            999999999999999995 6666665  3468999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+.+.... ........+||+.|||||++.+.   .++.++|||||||++|||++|..||.+.+..+++..+....  
T Consensus       153 G~a~~~~~~~-~~~~~~~~~GT~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~--  226 (288)
T d1uu3a_         153 GTAKVLSPES-KQARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--  226 (288)
T ss_dssp             TTCEECC-----------CCCCGGGCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC--
T ss_pred             ccceecccCC-cccccccccCCccccCceeeccC---CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC--
Confidence            9998764321 12233456899999999999754   68999999999999999999999999999999998887553  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-------HHHhCCCCCCCCCc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-------VFKSDGGWTGHGSR  319 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-------~L~~~~~~~~~~~~  319 (620)
                      ..+|..+++++++||.+||++||++|||++|+++       .+.+..+|......
T Consensus       227 ~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~  281 (288)
T d1uu3a_         227 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  281 (288)
T ss_dssp             CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcC
Confidence            4578899999999999999999999999988643       34556677665543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-51  Score=425.26  Aligned_cols=248  Identities=20%  Similarity=0.283  Sum_probs=214.4

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH---HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM---RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~---~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .|+++++||+|+||+||+|++..++      +.||||+++.......   ..+.++.  .+++.++|||||++++++.++
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~Ei--~il~~l~HpnIv~~~~~~~~~   87 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNS------EVVAIKKMSYSGKQSNEKWQDIIKEV--RFLQKLRHPNTIQYRGCYLRE   87 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEECCSSCHHHHHHHHHHHH--HHHTTCCCTTBCCEEEEEEET
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCC------cEEEEEEEchhhccCHHHHHHHHHHH--HHHHHCCCCCEeeEEEEEEEC
Confidence            4999999999999999999987665      4899999986543222   2222222  356778999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+|||||||.|++++.+.. ...++++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        88 ~~~~iv~E~~~~g~l~~~~~-~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_          88 HTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (309)
T ss_dssp             TEEEEEEECCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CEEEEEEEecCCCchHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccC
Confidence            99999999999877776543 45789999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  278 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~  278 (620)
                      .       ....+||+.|||||++.+...+.|+.++|||||||++|||++|..||.+.+..+.+..+.........+..+
T Consensus       167 ~-------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  239 (309)
T d1u5ra_         167 P-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW  239 (309)
T ss_dssp             S-------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTS
T ss_pred             C-------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCC
Confidence            2       234689999999999976555679999999999999999999999999999888888887776666667789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      |+++.+||.+||++||++|||++++++
T Consensus       240 s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         240 SEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            999999999999999999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-51  Score=425.41  Aligned_cols=268  Identities=20%  Similarity=0.288  Sum_probs=209.9

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|+.++|++.+.||+|+||+||+|+++.+++   ....||||.+...........+.++. .+++.++|||||+++++
T Consensus        20 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~HpnIv~l~g~   95 (299)
T d1jpaa_          20 AKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK---REIFVAIKTLKSGYTEKQRRDFLSEA-SIMGQFDHPNVIHLEGV   95 (299)
T ss_dssp             SCBCCGGGEEEEEEEEECSSSEEEEEEECC------CCEEEEEEECCSSCCHHHHHHHHHHH-HHHTTCCCTTBCCEEEE
T ss_pred             chhhChhhcEEeeEEeeCCCeEEEEEEEeCCCC---EEEEEEEEEECcccCHHHHHHHHHHH-HHHHhCCCCCCccEEEE
Confidence            446888999999999999999999999876553   23469999997765544333333333 35677799999999999


Q ss_pred             EEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          115 SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +..++.+|||||||+|+.++.+.....+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        96 ~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  175 (299)
T d1jpaa_          96 VTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS  175 (299)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             EeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccc
Confidence            99999999999999965555444445678999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCC--CCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCC
Q 007046          195 HLLLGIPLPS--SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       195 ~~~~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +.+.......  .......||+.|||||.+.+   +.++.++|||||||++|||+| |..||.+.+..++...+.... .
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~-~  251 (299)
T d1jpaa_         176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY-R  251 (299)
T ss_dssp             --------------------CGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-C
T ss_pred             eEccCCCCcceeeecccccCCccccCHHHHhc---CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C
Confidence            8775322111  11223468999999999864   479999999999999999998 899999999999888886553 4


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ++.|..+++++.+||.+||+.||++||++.+|++.|+..
T Consensus       252 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         252 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            556888999999999999999999999999999987653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-51  Score=420.46  Aligned_cols=260  Identities=25%  Similarity=0.367  Sum_probs=207.7

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCc--hhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~--~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .+|+.++|++.++||+|+||+||+|+++         ..||||+++...  ....+.+.++.  .+++.++|||||++++
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~---------~~vAvK~~~~~~~~~~~~~~~~~E~--~~l~~l~HpnIv~~~~   71 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH---------GDVAVKMLNVTAPTPQQLQAFKNEV--GVLRKTRHVNILLFMG   71 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS---------SEEEEEECCCSSCCTTHHHHHHHHH--HHHTTCCCTTBCCEEE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC---------CEEEEEEEEcccCCHHHHHHHHHHH--HHHHhCCCCCEeeeeE
Confidence            3589999999999999999999999742         149999997543  23333333333  3567789999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++. ++.+|||||||+ |+|.+.+.. ...++++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        72 ~~~-~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFG  149 (276)
T d1uwha_          72 YST-APQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG  149 (276)
T ss_dssp             EEC-SSSCEEEEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCC
T ss_pred             EEe-ccEEEEEEecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccc
Confidence            875 456899999999 577666653 55679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei-~~~i~~~~~~  271 (620)
                      +|+...... .........||+.|||||++.+...++|+.++|||||||++|||+||+.||.+.+..+. ...+......
T Consensus       150 la~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  228 (276)
T d1uwha_         150 LATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS  228 (276)
T ss_dssp             CSCC-------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCC
T ss_pred             ceeeccccC-CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCC
Confidence            998764321 22234556899999999999766566799999999999999999999999998765544 4444444333


Q ss_pred             C---CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          272 P---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       272 ~---~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +   ..+..+|+++.+||.+||+.||++|||+++|++.|+.
T Consensus       229 p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            3   3567899999999999999999999999999997765

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-51  Score=422.68  Aligned_cols=250  Identities=18%  Similarity=0.290  Sum_probs=210.4

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|+++++||+|+||+||+|+++.++      +.||||+++.......+.+.++.  .+++.++||||+++++++.+++
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~------~~vAvK~~~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~~~~~~~   90 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATG------QEVAIRQMNLQQQPKKELIINEI--LVMRENKNPNIVNYLDSYLVGD   90 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTC------CEEEEEEEEGGGCSCHHHHHHHH--HHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCC------CEEEEEEEecccChHHHHHHHHH--HHHHhCCCCCEeeEeEEEEECC
Confidence            357999999999999999999977665      48999999765544434343333  3567789999999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccC
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG  199 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~  199 (620)
                      .+|||||||+|+.+..+.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++++||+|||+|+.+..
T Consensus        91 ~~~ivmEy~~gg~L~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1          91 ELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             EEEEEEECCTTCBHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEEEecCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence            999999999964444333  235799999999999999999999999999999999999999999999999999987643


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-CCCCCCCCC
Q 007046          200 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGL  278 (620)
Q Consensus       200 ~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~-~~~~~p~~~  278 (620)
                      .   .......+||+.|||||++.+.   +++.++|||||||++|+|+||..||.+.+..+.+..+.... .....+..+
T Consensus       169 ~---~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T d1yhwa1         169 E---QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL  242 (293)
T ss_dssp             T---TCCBCCCCSCGGGCCHHHHSSS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGS
T ss_pred             c---cccccccccCCCccChhhhcCC---CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccC
Confidence            2   2233456899999999999754   68899999999999999999999999988877766665443 334566789


Q ss_pred             CHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          279 PPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       279 s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ++++++||.+||++||++|||+.|+++
T Consensus       243 s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         243 SAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999999999987

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-51  Score=417.56  Aligned_cols=252  Identities=21%  Similarity=0.285  Sum_probs=201.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      +++|++++.||+|+||.||+|+++.+++      .||||+++...... ....+.++. .+++.++||||+++++++.+ 
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~------~vAvK~i~~~~~~~~~~~~~~~E~-~il~~l~HpnIv~~~~~~~~~   75 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGK------ILVWKELDYGSMTEAEKQMLVSEV-NLLRELKHPNIVRYYDRIIDR   75 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCC------EEEEEEECCTTSCHHHHHHHHHHH-HHTTSCCCTTBCCEEEEEEC-
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCC------EEEEEEEChhhCCHHHHHHHHHHH-HHHHHCCCCCEeeEEEEEEeC
Confidence            4789999999999999999999877664      89999997654332 222222222 35677899999999999864 


Q ss_pred             -CCEEEEEEecCC-CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeeecccCCcEEEccCCcEEE
Q 007046          118 -NGKICIIMKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVL  188 (620)
Q Consensus       118 -~~~~~IVmE~~~-GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~g-----IiHrDLKP~NILld~~~~vkL  188 (620)
                       ++.+|||||||+ |+|.+++...  ....+++..++.++.||+.||.|||+++     |+||||||+|||++.++.+||
T Consensus        76 ~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl  155 (269)
T d2java1          76 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL  155 (269)
T ss_dssp             ---CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEE
T ss_pred             CCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence             456899999998 5777776543  3578999999999999999999999976     999999999999999999999


Q ss_pred             eccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          189 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       189 ~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      +|||+|+.+...   .......+||+.|||||++.+.   .++.++|||||||++|||+||+.||.+.+..++...+...
T Consensus       156 ~DFG~a~~~~~~---~~~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~  229 (269)
T d2java1         156 GDFGLARILNHD---TSFAKAFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG  229 (269)
T ss_dssp             CCHHHHHHC--------------CCCSCCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             eeccceeecccC---CCccccCCCCcccCCHHHHcCC---CCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence            999999887431   2233457899999999999643   6899999999999999999999999999999998888765


Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .. +.+|..+|+++.+||.+||+.||++|||+.|+++
T Consensus       230 ~~-~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         230 KF-RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            43 4578899999999999999999999999999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.2e-51  Score=425.56  Aligned_cols=269  Identities=23%  Similarity=0.298  Sum_probs=226.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .++|+++++||+|+||+||+|+++.++      +.||||++++....   ....+.++.  .+++.++||||+++++++.
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g------~~vAvK~i~~~~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~~~~   74 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNG------RYYAMKVLKKEIVVRLKQVEHTNDER--LMLSIVTHPFIIRMWGTFQ   74 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHTTCHHHHHHHH--HHHHSCCBTTBCCEEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCC------CEEEEEEEchHHccCHHHHHHHHHHH--HHHHhccCcChhheeeeEe
Confidence            467999999999999999999987665      48999999754321   122222222  3677789999999999999


Q ss_pred             ECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          117 INGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       117 ~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      +++.+|+|||||+|+.+..+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus        75 ~~~~~~ivmE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~  153 (316)
T d1fota_          75 DAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY  153 (316)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             eCCeeeeEeeecCCcccccccc-ccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceE
Confidence            9999999999999655554443 567789999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ...      ...+.+||+.|||||++.+.   +|+.++|||||||++|||+||+.||.+.+..+++..+....  ..+|.
T Consensus       154 ~~~------~~~~~~Gt~~Y~APE~l~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--~~~p~  222 (316)
T d1fota_         154 VPD------VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPP  222 (316)
T ss_dssp             CSS------CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCT
T ss_pred             ecc------ccccccCcccccCHHHHcCC---CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC--CCCCC
Confidence            632      23457899999999999754   68899999999999999999999999999999998887654  45678


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      .+++++.++|.+||++||.+|+     +++++++ .+.+..+|.....+...+|+.+.
T Consensus       223 ~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~  280 (316)
T d1fota_         223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP  280 (316)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCCcCCCCC
Confidence            8999999999999999999996     8999997 56677788776666666666554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-51  Score=422.61  Aligned_cols=254  Identities=19%  Similarity=0.283  Sum_probs=212.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|+++++||+|+||.||+|+++.++      +.||||+++.......+.+..+..  +++.++|||||++++++.+++.
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~E~~--il~~l~HpnIv~l~~~~~~~~~   83 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETS------VLAAAKVIDTKSEEELEDYMVEID--ILASCDHPNIVKLLDAFYYENN   83 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECSSSGGGGGTHHHHH--HHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCC------eEEEEEEECcCCHHHHHHHHHHHH--HHHhCCCCCCCeEEEEEeeCCe
Confidence            46999999999999999999987766      489999998765555444444443  5567799999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +|||||||+|+.+..+......++++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus        84 ~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~  163 (288)
T d2jfla1          84 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT  163 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence            99999999964444433335678999999999999999999999999999999999999999999999999999765321


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-CCCCCCC
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSG  277 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~--~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~-~~~~p~~  277 (620)
                         .......+||+.|||||++...  ...+|+.++|||||||++|||+||+.||.+.+..+++..+..... ....+..
T Consensus       164 ---~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  240 (288)
T d2jfla1         164 ---IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR  240 (288)
T ss_dssp             ---HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGG
T ss_pred             ---cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccc
Confidence               1122356899999999998532  234688999999999999999999999999998888888876543 2345678


Q ss_pred             CCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          278 LPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       278 ~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +|+++.+||.+||++||++|||+.|+++
T Consensus       241 ~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         241 WSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999999999987

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-51  Score=429.80  Aligned_cols=270  Identities=20%  Similarity=0.302  Sum_probs=220.2

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....|+.++|++.+.||+|+||+||+|++..+++ ......||+|.+...........+.++..++.++.+|||||++++
T Consensus        30 ~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~  108 (325)
T d1rjba_          30 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISK-TGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG  108 (325)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSS-SSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCc-ccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEE
Confidence            3456899999999999999999999999887654 234567999999765444333333344445556669999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhc---------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeee
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLK---------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVL  171 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~---------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHr  171 (620)
                      ++.+.+.+|||||||+ |+|.+++...+                     ...+++..++.|+.||+.||+|||+++|+||
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR  188 (325)
T d1rjba_         109 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  188 (325)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            9999999999999998 57777765422                     1358999999999999999999999999999


Q ss_pred             cccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CC
Q 007046          172 NLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GV  250 (620)
Q Consensus       172 DLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~  250 (620)
                      ||||+|||++.++.+||+|||+|+....... .....+..||+.|||||++.+   +.++.++|||||||++|||+| |.
T Consensus       189 DlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~---~~~~~~~DiwS~Gvil~emlt~g~  264 (325)
T d1rjba_         189 DLAARNVLVTHGKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMAPESLFE---GIYTIKSDVWSYGILLWEIFSLGV  264 (325)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             cCchhccccccCCeEEEeeccccccccCCCc-eeeeccccCCCccCChHHHcC---CCCCcceeccchhHHHHHHHhCCC
Confidence            9999999999999999999999987643211 112234578999999999864   368999999999999999998 89


Q ss_pred             CCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       251 ~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      +||.+.+..+.+..+......++.|..+|+++++||.+||+.||++|||++||++.|.
T Consensus       265 ~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         265 NPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            9999887777666677777777889999999999999999999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-50  Score=413.11  Aligned_cols=268  Identities=22%  Similarity=0.298  Sum_probs=211.9

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .+|++++|++.+.||+|+||.||+|.++.++.  .....||||+++..........+.++. .+++.++|||||++++++
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~E~-~il~~l~H~nIv~~~g~~   78 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG--KKEVPVAIKTLKAGYTEKQRVDFLGEA-GIMGQFSHHNIIRLEGVI   78 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTTCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEE
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCC--EEEEEEEEEEECcccChHHHHHHHHHH-HHHHhcCCCCEeeeeEEE
Confidence            46899999999999999999999999876543  234579999997665544333333333 356777999999999999


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ...+.+++|||||.++++..+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        79 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  158 (283)
T d1mqba_          79 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  158 (283)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             ecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhh
Confidence            99999999999999655555444466789999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+..............||+.|||||++.+.   .++.++|||||||++|||++| .+||...+..+++..+... ..++.
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~  234 (283)
T d1mqba_         159 VLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPT  234 (283)
T ss_dssp             ---------------CCCGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCC
T ss_pred             cccCCCccceEeccCCCCccccCHHHHccC---CCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhcc-CCCCC
Confidence            875433222333445789999999998643   789999999999999999995 5667777788888777544 45667


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      |..++.++.+||.+||+.||++||++.+|++.|+..
T Consensus       235 ~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l  270 (283)
T d1mqba_         235 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  270 (283)
T ss_dssp             CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence            889999999999999999999999999999977653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.3e-51  Score=419.34  Aligned_cols=261  Identities=20%  Similarity=0.334  Sum_probs=218.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ..+|+.++|++.++||+|+||+||+|+++.++      +.||||+++...... +.+.++.  .+++.++|||||+++++
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~-~~~~~E~--~il~~l~HpnIv~~~~~   81 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYS------LTVAVKTLKEDTMEV-EEFLKEA--AVMKEIKHPNLVQLLGV   81 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGT------EEEEEEECCTTCSCH-HHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCC------eEEEEEEECCccchH-HHHHHHH--HHHHhCCCCCEecCCcc
Confidence            45689999999999999999999999987665      489999997655432 3344433  35666799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.+++.+|||||||+ |++.+.+.......+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~  161 (287)
T d1opja_          82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL  161 (287)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred             EeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccc
Confidence            999999999999999 6777777665567899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~-Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      |+......  ........||+.|||||++.+.   .++.++|||||||++|||++|.. ||.+.+..++++.+. ....+
T Consensus       162 a~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~---~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~-~~~~~  235 (287)
T d1opja_         162 SRLMTGDT--YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRM  235 (287)
T ss_dssp             TTTCCSSS--SEEETTEEECGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TTCCC
T ss_pred             eeecCCCC--ceeeccccccccccChHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh-cCCCC
Confidence            98764321  1122334689999999998643   68999999999999999999655 456667767666554 44566


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ..|..+|+++.+||.+||+.||++|||+.+|++.|+..
T Consensus       236 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            78889999999999999999999999999999988764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-51  Score=416.91  Aligned_cols=253  Identities=21%  Similarity=0.272  Sum_probs=204.2

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.++||+|+||+||+|+++.++      +.||||+++............++. .+++.++||||+++++++.+++
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~Ei-~~l~~l~HpnIv~~~~~~~~~~   76 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTE------EAVAVKIVDMKRAVDCPENIKKEI-CINKMLNHENVVKFYGHRREGN   76 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECC-------CHHHHH-HHHHTCCCTTBCCEEEEEEETT
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHHHHH-HHHHhCCCCCEeeEeeeeccCc
Confidence            367999999999999999999987766      489999997654333222222332 3567789999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      .+|||||||+| +|.+.+.  +...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus        77 ~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          77 IQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             EEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             eeEEEEeccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            99999999995 7777664  45689999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCCCCC
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~-ei~~~i~~~~~~~~~p~  276 (620)
                      ... ........+||+.|||||++.+.   ++ +.++|||||||++|||+||+.||...... ..+..+...........
T Consensus       155 ~~~-~~~~~~~~~GT~~Y~APE~~~~~---~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~  230 (271)
T d1nvra_         155 YNN-RERLLNKMCGTLPYVAPELLKRR---EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK  230 (271)
T ss_dssp             ETT-EECCBCCCCSCGGGSCTHHHHCS---SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGG
T ss_pred             cCC-ccccccceeeCcCccCHhHhcCC---CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccc
Confidence            321 12233456899999999998754   34 57899999999999999999999765543 33444443333344456


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+++++.+||.+||++||++|||++|+++
T Consensus       231 ~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         231 KIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            78999999999999999999999999986

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-50  Score=425.89  Aligned_cols=273  Identities=22%  Similarity=0.297  Sum_probs=229.2

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH---HHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR---MRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~---~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      .....++|++++.||+|+||.||+|+++.+++      .||||++++.....   ...+..+.  .+++.++||||++++
T Consensus        36 ~~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~------~~AvK~i~~~~~~~~~~~~~~~~E~--~il~~l~hpnIv~~~  107 (350)
T d1rdqe_          36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGN------HYAMKILDKQKVVKLKQIEHTLNEK--RILQAVNFPFLVKLE  107 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCC------EEEEEEEEHHHHHHTTCHHHHHHHH--HHHTTCCCTTBCCEE
T ss_pred             CCCCccCeEEEEEeecCcCcEEEEEEECCCCC------EEEEEEEchHHccCHHHHHHHHHHH--HHHHHcCCCcEeecc
Confidence            33445899999999999999999999877664      89999997533211   22223322  356778999999999


Q ss_pred             EEEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      +++.....+|+||||+.| ++.+.+.  +.+.+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus       108 ~~~~~~~~~~~v~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DF  185 (350)
T d1rdqe_         108 FSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF  185 (350)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             cccccccccccccccccccchhhhHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeec
Confidence            999999999999999995 5556654  3467999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |+|+.+.+      .....+||+.|||||++.+.   .++.++|||||||++|||+||..||.+.+..+++..+....  
T Consensus       186 G~a~~~~~------~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--  254 (350)
T d1rdqe_         186 GFAKRVKG------RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--  254 (350)
T ss_dssp             TTCEECSS------CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--
T ss_pred             eeeeeccc------ccccccCccccCCHHHHcCC---CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC--
Confidence            99987642      23456899999999999754   68899999999999999999999999999999988887653  


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      +.+|..+++++.+||++||++||.+|+     +++++++ .+.+..+|.........+|+.|..
T Consensus       255 ~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~  318 (350)
T d1rdqe_         255 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF  318 (350)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCC
Confidence            456789999999999999999999995     8999997 566777888777776777766653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-50  Score=413.24  Aligned_cols=263  Identities=19%  Similarity=0.270  Sum_probs=215.8

Q ss_pred             CCcCCCCeeEEe-eeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           36 AWIKPSALKLRH-RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        36 ~~I~~~~y~i~~-~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ..|+.++|.+.+ +||+|+||.||+|.++.++.    +..||||+++..........+.++. .+++.++|||||+++++
T Consensus         3 l~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~----~~~vAvK~l~~~~~~~~~~~~~~E~-~il~~l~HpnIv~l~g~   77 (285)
T d1u59a_           3 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKK----QIDVAIKVLKQGTEKADTEEMMREA-QIMHQLDNPYIVRLIGV   77 (285)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---C----CEEEEEEEECSSCCHHHHHHHHHHH-HHHHHCCCTTBCCEEEE
T ss_pred             eeecccCeEECCcEEecccCeEEEEEEEecCCC----cEEEEEEEEChhcCHHHHHHHHHHH-HHHHhCCCCCEeeEeee
Confidence            457788999999 49999999999998765432    3579999998765444333333333 35566799999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.. +.+|||||||+| +|.+++. .....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        78 ~~~-~~~~lvmE~~~~g~L~~~l~-~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGl  155 (285)
T d1u59a_          78 CQA-EALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL  155 (285)
T ss_dssp             EES-SSEEEEEECCTTEEHHHHHT-TCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred             ecc-CeEEEEEEeCCCCcHHHHhh-ccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchh
Confidence            865 568999999995 5555543 3456899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++.+..............||+.|||||++.+.   .++.++|||||||++|||+| |..||.+.+..++...+..+ ..+
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~-~~~  231 (285)
T d1u59a_         156 SKALGADDSYYTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-KRM  231 (285)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-CCC
T ss_pred             hhcccccccccccccccccCccccChHHHhCC---CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            99875433333344456799999999998643   68999999999999999998 99999998888888877654 456


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .+|..+|+++.+||.+||+.||++||++.+|++.|+.
T Consensus       232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            6788999999999999999999999999999887654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-51  Score=425.43  Aligned_cols=271  Identities=21%  Similarity=0.321  Sum_probs=222.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|++.+.||+|+||+||+|+++.++      +.||||++++...   ........+ ..++.+..+||||+++++++.+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~------~~vAvK~i~k~~~~~~~~~~~~~~e-~~~l~~~~~hp~Iv~~~~~~~~   74 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTN------QFFAIKALKKDVVLMDDDVECTMVE-KRVLSLAWEHPFLTHMFCTFQT   74 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEEHHHHHHTTCHHHHHHH-HHHHHHHTTCTTBCCEEEEEEC
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCC------CEEEEEEEchhhccChHHHHHHHHH-HHHHHHhCCCCcEEEEEEEEcc
Confidence            68999999999999999999987665      4899999975432   112222222 3345567899999999999999


Q ss_pred             CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          118 NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       118 ~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++.+|||||||+| +|.+++.  ....+++.++..++.||+.||+|||+++|+||||||+|||++.++++||+|||+++.
T Consensus        75 ~~~~yivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~  152 (320)
T d1xjda_          75 KENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  152 (320)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCceeEEEeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhh
Confidence            9999999999995 6666665  346799999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ...   ........+||+.|||||++.+.   +++.++|||||||++|||+||+.||.+.+..+++..+...  .+.+|.
T Consensus       153 ~~~---~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~  224 (320)
T d1xjda_         153 NML---GDAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPR  224 (320)
T ss_dssp             CCC---TTCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCT
T ss_pred             ccc---ccccccccCCCCCcCCHHHHcCC---CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCc
Confidence            533   22334456899999999999754   7899999999999999999999999999999999888654  456788


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHH-HHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMT-DILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~-eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      .+|+++++||.+||++||++||++. ++++ .+.+..+|.........+|..|.
T Consensus       225 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~~~l~~~~~~pp~~p~  278 (320)
T d1xjda_         225 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPK  278 (320)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHHHHHTTCSCC-----
T ss_pred             cCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999995 7876 55666677665555555565554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-50  Score=407.82  Aligned_cols=256  Identities=20%  Similarity=0.344  Sum_probs=206.1

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|++++|++.++||+|+||.||+|++...       ..||||+++...... ..+.++.  .+++.++||||++++++|.
T Consensus         1 ~idp~~~~~~~~iG~G~fg~Vy~~~~~~~-------~~vAvK~i~~~~~~~-~~~~~E~--~~l~~l~HpnIv~~~g~~~   70 (263)
T d1sm2a_           1 VIDPSELTFVQEIGSGQFGLVHLGYWLNK-------DKVAIKTIREGAMSE-EDFIEEA--EVMMKLSHPKLVQLYGVCL   70 (263)
T ss_dssp             CBCCSCEEEEEEEECCSSCCEEEEEETTT-------EEEEEEECCSSSSCH-HHHHHHH--HHHHHCCCTTBCCEEEEEC
T ss_pred             CCChHHcEEEEEEeeCCCeEEEEEEECCC-------CEEEEEEECCCcCcH-HHHHHHH--HHHHhcCCCCcccccceec
Confidence            37899999999999999999999987532       369999998655433 3344433  3556679999999999999


Q ss_pred             ECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          117 INGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       117 ~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      .++.+|||||||+ |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        71 ~~~~~~lv~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~  149 (263)
T d1sm2a_          71 EQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR  149 (263)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---
T ss_pred             cCCceEEEEEecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchhe
Confidence            9999999999999 556665543 55778999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      ......  ........||+.|||||++.+.   .++.++|||||||++|||+| |.+||...+..+++..+... ..+..
T Consensus       150 ~~~~~~--~~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~  223 (263)
T d1sm2a_         150 FVLDDQ--YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYK  223 (263)
T ss_dssp             -----------------CTTSCCHHHHTTC---CCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT-CCCCC
T ss_pred             eccCCC--ceeecceecCcccCChHHhcCC---CCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc-CCCCC
Confidence            764321  1222345799999999999744   69999999999999999999 67788888888888887665 44556


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      |..+++++.+||.+||+.||++||++++|++.|++
T Consensus       224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            88999999999999999999999999999998875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.9e-50  Score=415.98  Aligned_cols=250  Identities=22%  Similarity=0.330  Sum_probs=198.0

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .+.|++.+.||+|+||+||+|+++.++      +.||||++.............++. .+++.++||||+++++++.+++
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~   80 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQ------KLVAIKCIAKKALEGKEGSMENEI-AVLHKIKHPNIVALDDIYESGG   80 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTC------CEEEEEEEEC----------CHHH-HHHHTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCC------CEEEEEEEchHHhhhHHHHHHHHH-HHHHhCCCCCCCcEEEEEEECC
Confidence            356999999999999999999987665      489999998655433333333333 3567789999999999999999


Q ss_pred             EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc---cCCcEEEeccCCcc
Q 007046          120 KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGIPH  195 (620)
Q Consensus       120 ~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld---~~~~vkL~DFGla~  195 (620)
                      .+|||||||+ |+|.+++.  ..+.+++.++..++.||+.||+|||+++|+||||||+|||+.   .++.+||+|||+|+
T Consensus        81 ~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          81 HLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             EEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             EEEEEEeccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            9999999999 57777775  467899999999999999999999999999999999999995   57899999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--C
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--P  273 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--~  273 (620)
                      ....    .....+.+||+.|||||++.+.   +|+.++|||||||++|||++|..||.+.+..++...+.......  +
T Consensus       159 ~~~~----~~~~~~~~GT~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  231 (307)
T d1a06a_         159 MEDP----GSVLSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP  231 (307)
T ss_dssp             ------------------CTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTT
T ss_pred             EccC----CCeeeeeeeCccccCcHHHcCC---CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCc
Confidence            7632    2233456899999999999754   68999999999999999999999999999999988887765443  3


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+|+++.+||.+||++||++|||++|+++
T Consensus       232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            44689999999999999999999999999998

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-49  Score=412.14  Aligned_cols=268  Identities=20%  Similarity=0.317  Sum_probs=210.9

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|+.++|++.++||+|+||.||+|++...+. ..+++.||||+++.............+...+.++.+|+||+.+++++.
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~   87 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDK-TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   87 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTS-SSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccHHHEEEeeEEeecCCeEEEEEEEcCCCc-ccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence            3888999999999999999999999877653 456678999999865544433333344445677778999999999887


Q ss_pred             EC-CEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEE
Q 007046          117 IN-GKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL  180 (620)
Q Consensus       117 ~~-~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILl  180 (620)
                      .. ..+|+|||||+ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+|||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence            54 46899999999 67777665322              2458999999999999999999999999999999999999


Q ss_pred             ccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHH
Q 007046          181 NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVD  259 (620)
Q Consensus       181 d~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~  259 (620)
                      +.++.+||+|||+|+...... .........||+.|||||++.+.   .++.++|||||||++|||+|| .+||.+.+..
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~---~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             CGGGCEEECC------CCSCT-TSCCTTSCCCGGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             CCCCcEEEccCcchhhccccc-cccccCceeeCccccchhHhhcC---CCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999998764322 12233456899999999999744   689999999999999999996 5688877655


Q ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       260 ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +.+..+......+..|..+++++.+||.+||+.||++|||+.+|++.|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         244 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            55555555556777889999999999999999999999999999998765

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-49  Score=405.44  Aligned_cols=246  Identities=22%  Similarity=0.305  Sum_probs=202.3

Q ss_pred             CeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh-HHHHHHHHHHHHHHHccCCCceeEeEEEEEE---
Q 007046           42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED-RMRVLLERLNDLFLKCQGVEGICWLQGISVI---  117 (620)
Q Consensus        42 ~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~-~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~---  117 (620)
                      -|++.++||+|+||+||+|++..++      +.||+|++...... .....+.++. .+++.++||||+++++++..   
T Consensus        10 y~~~~~~iG~G~fg~Vy~~~~~~~~------~~va~K~i~~~~~~~~~~~~~~~E~-~il~~l~HpnIv~~~~~~~~~~~   82 (270)
T d1t4ha_          10 FLKFDIEIGRGSFKTVYKGLDTETT------VEVAWCELQDRKLTKSERQRFKEEA-EMLKGLQHPNIVRFYDSWESTVK   82 (270)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEGGGSCHHHHHHHHHHH-HHHTTCCCTTBCCEEEEEEEESS
T ss_pred             EEEeeeEEecCcCcEEEEEEECCCC------eEEEEEEEchhhCCHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEeeccc
Confidence            3588889999999999999987665      47999999765422 2222222332 35677899999999999875   


Q ss_pred             -CCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeecccCCcEEEc-cCCcEEEeccC
Q 007046          118 -NGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILN-EADRAVLGDVG  192 (620)
Q Consensus       118 -~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~g--IiHrDLKP~NILld-~~~~vkL~DFG  192 (620)
                       +..+|||||||+| +|.+++.  +...+++..+..++.||+.||+|||+++  |+||||||+|||++ .++.+||+|||
T Consensus        83 ~~~~~~ivmE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFG  160 (270)
T d1t4ha_          83 GKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG  160 (270)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             cCCEEEEEEeCCCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecC
Confidence             3568999999995 6666665  3467999999999999999999999998  99999999999996 57899999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-~~~ei~~~i~~~~~~  271 (620)
                      +|+...     .......+||+.|||||++.+    +++.++|||||||++|||++|+.||.+. +..++++.+.....+
T Consensus       161 la~~~~-----~~~~~~~~GT~~Y~aPE~~~~----~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~  231 (270)
T d1t4ha_         161 LATLKR-----ASFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP  231 (270)
T ss_dssp             GGGGCC-----TTSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred             cceecc-----CCccCCcccCccccCHHHhCC----CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC
Confidence            998652     223345689999999999853    5899999999999999999999999765 455666766655555


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.++..+++++++||.+||++||++|||++|+++
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         232 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            5667789999999999999999999999999987

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.7e-49  Score=418.82  Aligned_cols=249  Identities=20%  Similarity=0.307  Sum_probs=212.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.+.||+|+||.||+|+++.++      +.||||++..........+.++.  .+++.++||||+++++++.+++.
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g------~~vAvK~i~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATG------NNFAAKFVMTPHESDKETVRKEI--QTMSVLRHPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTT------EEEEEEEECCCSHHHHHHHHHHH--HHHHHTCCTTBCCEEEEEEETTE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEcccchhhHHHHHHHH--HHHHhCCCCCCCcEEEEEEECCE
Confidence            58999999999999999999987665      48999999876654444443333  35566789999999999999999


Q ss_pred             EEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc--CCcEEEeccCCcccc
Q 007046          121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHLL  197 (620)
Q Consensus       121 ~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~--~~~vkL~DFGla~~~  197 (620)
                      +|||||||+ |+|.+.+.. ..+++++..+..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+|+.+
T Consensus        98 ~~ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            999999999 566676643 4567999999999999999999999999999999999999964  678999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--CC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--~p  275 (620)
                      ..    ........||+.|||||++.+.   +++.++|||||||++|||++|+.||.+.+..+++..+........  ..
T Consensus       177 ~~----~~~~~~~~gT~~Y~aPEv~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  249 (350)
T d1koaa2         177 DP----KQSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF  249 (350)
T ss_dssp             CT----TSCEEEECSCTTTCCHHHHHTC---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGG
T ss_pred             cc----ccccceecCcccccCHHHHcCC---CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            42    2233456899999999999754   688999999999999999999999999999999988876654332  33


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+|+++++||.+||.+||++|||++|+++
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            578999999999999999999999999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-49  Score=407.22  Aligned_cols=259  Identities=20%  Similarity=0.277  Sum_probs=205.9

Q ss_pred             cCCCCeeEE-eeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i~-~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      |+.+.+.+. ++||+|+||+||+|.+....    .++.||||+++....+.  ...+.++ . .+++.++|||||+++++
T Consensus         3 ld~~~~~le~k~iG~G~fG~Vy~~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~E-~-~il~~l~HpnIv~~~g~   76 (277)
T d1xbba_           3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKK----VVKTVAVKILKNEANDPALKDELLAE-A-NVMQQLDNPYIVRMIGI   76 (277)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSS----SEEEEEEEEEC-----CHHHHHHHHH-H-HHHHTCCCTTBCCEEEE
T ss_pred             echhhCeecCCCcccCCCeEEEEEEEccCC----cCeEEEEEEEChhhCCHHHHHHHHHH-H-HHHHhCCCCCCceEEEE
Confidence            344555655 46999999999999875432    34689999997644322  2223333 2 35677799999999999


Q ss_pred             EEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      |.. +..|||||||+| +|.+++.  ...++++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        77 ~~~-~~~~lvmE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGl  153 (277)
T d1xbba_          77 CEA-ESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL  153 (277)
T ss_dssp             EES-SSEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             ecc-CCEEEEEEcCCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhh
Confidence            865 457899999995 5656554  457799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++.+..............||+.|||||.+.+.   .++.++|||||||++|||+| |+.||.+.+..++...+..+ .++
T Consensus       154 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~-~~~  229 (277)
T d1xbba_         154 SKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-ERM  229 (277)
T ss_dssp             CEECCTTCSEEEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCC
T ss_pred             hhhccccccccccccccCCCceecCchhhcCC---CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            98775432222233445799999999998643   68899999999999999998 99999999998888877654 456


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      +.|..+|+++.+||.+||+.||++||++++|++.|+.
T Consensus       230 ~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            6789999999999999999999999999999776543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-50  Score=418.46  Aligned_cols=251  Identities=23%  Similarity=0.338  Sum_probs=202.4

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      .|..++|+++++||+|+||+||+|+++.++      +.||+|+++............++. .+++.++|||||+++++|.
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~   74 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIREL-QVLHECNSPYIVGFYGAFY   74 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTT------EEEEEEEEECCCCTTHHHHHHHHG-GGGGGCCCTTBCCEEEEEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEChhhCHHHHHHHHHHH-HHHHhCCCCCCCcEEEEEE
Confidence            366789999999999999999999987665      489999998654443333333332 2567789999999999999


Q ss_pred             ECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          117 INGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       117 ~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      +++.+|||||||+| +|.+++.  +.+.+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+|
T Consensus        75 ~~~~~~iVmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla  152 (322)
T d1s9ja_          75 SDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  152 (322)
T ss_dssp             CSSEEEEEEECCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCc
Confidence            99999999999995 6666665  34679999999999999999999997 59999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-------------  261 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei-------------  261 (620)
                      +.+..     ....+.+||+.|||||++.+.   +|+.++|||||||++|||++|+.||.+.+..+.             
T Consensus       153 ~~~~~-----~~~~~~~GT~~Y~APEvl~~~---~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~  224 (322)
T d1s9ja_         153 GQLID-----SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA  224 (322)
T ss_dssp             HHHHH-----HTC---CCSSCCCCHHHHHCS---CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------
T ss_pred             cccCC-----CccccccCCccccCchHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcc
Confidence            87643     233456899999999999754   699999999999999999999999976543221             


Q ss_pred             -----------------------------HHHHHhccCCCCCC-CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          262 -----------------------------YDAVVRRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       262 -----------------------------~~~i~~~~~~~~~p-~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                   ...+. ....+..+ ..++.++.+||.+||.+||++|||++|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ---------------------CCCCHHHHHHHHH-TSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCcccccccccccccccccccchhHHHHHhhhh-ccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                                         11111 11122222 346899999999999999999999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.8e-49  Score=422.31  Aligned_cols=276  Identities=19%  Similarity=0.272  Sum_probs=221.7

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh---HHHHHHHHHH-HHHHHccCCCceeEeEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED---RMRVLLERLN-DLFLKCQGVEGICWLQG  113 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~---~~~~~~~~~~-~~~l~~~~h~nIv~l~g  113 (620)
                      |..++|++.+.||+|+||.||+|++..++      +.||||++.+....   .......+.. ..+++..+|||||++++
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~------~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~   74 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTG------KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY   74 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEE
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCC------CEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence            45689999999999999999999987766      48999999653321   1122222221 12456678999999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++..++.+|||||||+ |+|.+++.  +...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        75 ~~~~~~~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFG  152 (364)
T d1omwa3          75 AFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG  152 (364)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCT
T ss_pred             EEEECCEEEEEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeec
Confidence            9999999999999999 56666665  34678999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-ccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~-~~~~  271 (620)
                      +|+.+..     ......+||+.|||||++...  ..|+.++|||||||++|||+||+.||.+.+..+....... ....
T Consensus       153 la~~~~~-----~~~~~~~GT~~y~APE~~~~~--~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~  225 (364)
T d1omwa3         153 LACDFSK-----KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA  225 (364)
T ss_dssp             TCEECSS-----SCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCC
T ss_pred             eeeecCC-----CcccccccccccchhHHhhcC--CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence            9987643     234556899999999998632  2588999999999999999999999987654433332222 2334


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCC-----HHHHHH-HHHhCCCCCCCCCccCCCCCCCC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPL-----MTDILR-VFKSDGGWTGHGSRILPDKSSSG  328 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs-----~~eil~-~L~~~~~~~~~~~~~~~~~~~~~  328 (620)
                      ..+|..+|+++++||.+||++||++||+     ++++++ .+.+..+|........++|..|.
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~  288 (364)
T d1omwa3         226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPP  288 (364)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCC
Confidence            5677899999999999999999999998     789987 66777788776666666666554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-49  Score=402.20  Aligned_cols=255  Identities=18%  Similarity=0.235  Sum_probs=216.8

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      |++++|++.++||+|+||+||+|+++.       ++.||||+++...... ..+.++.  .+++.++||||++++++|.+
T Consensus         1 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~-------~~~vAvK~l~~~~~~~-~~~~~Ev--~~~~~l~HpnIv~~~g~~~~   70 (258)
T d1k2pa_           1 IDPKDLTFLKELGTGQFGVVKYGKWRG-------QYDVAIKMIKEGSMSE-DEFIEEA--KVMMNLSHEKLVQLYGVCTK   70 (258)
T ss_dssp             CCCCCCCCCCCCCEETTEEEEEEEETT-------TEEEEEEEEESSSSCH-HHHHHHH--HHHHTCCCTTBCCEEEEECC
T ss_pred             CChHHCEEeEEEecCCCeEEEEEEECC-------CCEEEEEEECcCcCCH-HHHHHHH--HHHHhcCCCceeeEEEEEee
Confidence            678999999999999999999999742       2479999998765443 3344433  35677799999999999999


Q ss_pred             CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccc
Q 007046          118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL  197 (620)
Q Consensus       118 ~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~  197 (620)
                      ++.+++||||++++++..+.......+++..+.+++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        71 ~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~  150 (258)
T d1k2pa_          71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  150 (258)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBC
T ss_pred             CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheec
Confidence            99999999999854444443335678899999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS  276 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~  276 (620)
                      ....  ........||+.|||||.+.+.   .++.++|||||||++|||+| |+.||.+.+..++...+.... .+..|.
T Consensus       151 ~~~~--~~~~~~~~~t~~y~aPE~~~~~---~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~-~~~~p~  224 (258)
T d1k2pa_         151 LDDE--YTSSVGSKFPVRWSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RLYRPH  224 (258)
T ss_dssp             SSSS--CCCCCCSCCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-CCCCCT
T ss_pred             cCCC--ceeecccCCCCCcCCcHHhcCC---CCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC-CCCCcc
Confidence            4321  2233446799999999999744   68999999999999999998 899999999999988887654 556789


Q ss_pred             CCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHH
Q 007046          277 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  308 (620)
Q Consensus       277 ~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~  308 (620)
                      .+++++.+||.+||+.||++|||+++|++.|.
T Consensus       225 ~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         225 LASEKVYTIMYSCWHEKADERPTFKILLSNIL  256 (258)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence            99999999999999999999999999999775

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=406.53  Aligned_cols=258  Identities=22%  Similarity=0.347  Sum_probs=212.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ...|+.++|++.++||+|+||.||+|+++.       +..||||+++...... ..+.++.  .+++.++|||||+++++
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~-~~~~~E~--~~l~~l~HpnIv~~~g~   76 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYNG-------HTKVAVKSLKQGSMSP-DAFLAEA--NLMKQLQHQRLVRLYAV   76 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETT-------TEEEEEEEECTTSSCH-HHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEECC-------CCEEEEEEEccCcCCH-HHHHHHH--HHHHhCCCCCEeEEEee
Confidence            455889999999999999999999998653       2479999997655433 3344433  24566799999999998


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +. ++.+|||||||+ |+|.+.+......++++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+
T Consensus        77 ~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGl  155 (272)
T d1qpca_          77 VT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL  155 (272)
T ss_dssp             EC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             ec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccc
Confidence            75 456799999999 5666655443445799999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      |+.+....  ........||+.|||||++.+   +.++.++|||||||++|||+| |.+||...+..+++..+... ..+
T Consensus       156 a~~~~~~~--~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~-~~~  229 (272)
T d1qpca_         156 ARLIEDNE--YTAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRM  229 (272)
T ss_dssp             CEECSSSC--EECCTTCCCCTTTSCHHHHHH---CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCC
T ss_pred             eEEccCCc--cccccccCCcccccChHHHhC---CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCC
Confidence            98874321  122345679999999999864   368999999999999999999 56667777888888877654 455


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ..|..+++++.+||.+||+.||++|||+++|++.|+.
T Consensus       230 ~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            6788999999999999999999999999999987654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-49  Score=404.24  Aligned_cols=263  Identities=22%  Similarity=0.346  Sum_probs=207.5

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..|+.++|++.+.||+|+||.||+|++..+++   .+..||||.++....+.....+.++. .+++.++||||+++++++
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~---~~~~vaik~~~~~~~~~~~~~~~~E~-~~l~~l~HpnIv~l~~~~   77 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPEN---PALAVAIKTCKNCTSDSVREKFLQEA-LTMRQFDHPHIVKLIGVI   77 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC-----CCEEEEEEECTTTTSHHHHHHHHHHH-HHHHTCCCTTBCCEEEEE
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCc---eeEEEEEEEeccccCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEE
Confidence            35788999999999999999999999876543   34579999997665554444333333 356677999999999998


Q ss_pred             EECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          116 VINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       116 ~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      . ++.+||||||++++.+..+.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+
T Consensus        78 ~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          78 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             e-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence            5 567999999999544444433466789999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCC
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  274 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~  274 (620)
                      .+....  ........||+.|||||.+.+.   .++.++|||||||++|||+| |.+||.+.+..+++..+.... .+++
T Consensus       157 ~~~~~~--~~~~~~~~gt~~y~apE~l~~~---~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~-~~~~  230 (273)
T d1mp8a_         157 YMEDST--YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPM  230 (273)
T ss_dssp             ----------------CCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCC
T ss_pred             eccCCc--ceeccceecCcccchhhHhccC---CCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCC
Confidence            764321  1223345789999999999643   68999999999999999998 899999999999988887554 4567


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      |..+|+++.+||.+||+.||++|||+.+|++.|..
T Consensus       231 ~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            88999999999999999999999999999987765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-49  Score=407.68  Aligned_cols=248  Identities=20%  Similarity=0.283  Sum_probs=209.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh------HHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED------RMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~------~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ++|++.++||+|+||+||+|+++.++      +.||||++++....      ....+.++.  .+++.++||||++++++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~~AvK~i~~~~~~~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~~   81 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTG------LQYAAKFIKKRRTKSSRRGVSREDIEREV--SILKEIQHPNVITLHEV   81 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTC------CEEEEEEEEBCSSTTCSSSBCHHHHHHHH--HHHHHCCCTTBCCEEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCC------CEEEEEEEEhhhcchhhhhHHHHHHHHHH--HHHHhCCCCCCCcEEEE
Confidence            67999999999999999999987665      48999999754321      122233332  25666799999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC----cEEEe
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLG  189 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~----~vkL~  189 (620)
                      +.+++.+|||||||+ |+|.+++..  .+.+++..++.++.||+.||+|||+++|+||||||+|||++.++    .+||+
T Consensus        82 ~~~~~~~~iv~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~  159 (293)
T d1jksa_          82 YENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII  159 (293)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEEC
T ss_pred             EEECCEEEEEEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEec
Confidence            999999999999999 567676653  35799999999999999999999999999999999999998776    59999


Q ss_pred             ccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Q 007046          190 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  269 (620)
Q Consensus       190 DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~  269 (620)
                      |||+++....    ........||+.|||||++.+.   .++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus       160 DfG~a~~~~~----~~~~~~~~~t~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~  232 (293)
T d1jksa_         160 DFGLAHKIDF----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  232 (293)
T ss_dssp             CCTTCEECTT----SCBCSCCCCCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred             chhhhhhcCC----CccccccCCCCcccCHHHHcCC---CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcC
Confidence            9999987642    2234456899999999999754   68899999999999999999999999999999988887654


Q ss_pred             CCC--CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          270 EIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       270 ~~~--~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...  ..+..+|+++++||++||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            432  234689999999999999999999999999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-49  Score=406.75  Aligned_cols=274  Identities=20%  Similarity=0.291  Sum_probs=223.5

Q ss_pred             CCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcC-CCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeE
Q 007046           32 NDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTED-CDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICW  110 (620)
Q Consensus        32 ~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed-~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~  110 (620)
                      ..+...|+.++|++.+.||+|+||.||+|++..+++. ...+..||||+++.............+...+.++.+|||||+
T Consensus         4 ~~~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~   83 (299)
T d1fgka_           4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN   83 (299)
T ss_dssp             CCTTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            3445569999999999999999999999998776542 234568999999877655544444444445666679999999


Q ss_pred             eEEEEEECCEEEEEEecCC-CChHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccC
Q 007046          111 LQGISVINGKICIIMKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKP  175 (620)
Q Consensus       111 l~g~~~~~~~~~IVmE~~~-GsLld~l~~~~--------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP  175 (620)
                      ++++|.+++.+|+|||||. |++.+++....              ...+++.+++.++.||+.||+|||+.+|+||||||
T Consensus        84 ~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp  163 (299)
T d1fgka_          84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  163 (299)
T ss_dssp             EEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             cccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecc
Confidence            9999999999999999999 56666664322              24689999999999999999999999999999999


Q ss_pred             CcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 007046          176 FNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC  254 (620)
Q Consensus       176 ~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~  254 (620)
                      +|||++.++.+||+|||+++....... ........||+.|||||.+.+   +.|+.++|||||||++|||++ |.+||.
T Consensus       164 ~NiLl~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~l~~---~~y~~k~DiwS~Gvvl~ell~~g~~p~~  239 (299)
T d1fgka_         164 RNVLVTEDNVMKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYP  239 (299)
T ss_dssp             GGEEECTTCCEEECSTTCCCCGGGCCT-TCCCTTSCCGGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cceeecCCCCeEeccchhhcccccccc-ccccccCCCChhhhhhhHhcC---CCCCchhhhHHhHHHHHHhccCCCCCCC
Confidence            999999999999999999987754322 223345679999999999964   479999999999999999998 799999


Q ss_pred             CCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       255 ~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +.+..++++.+.. ...+..|..+++++.+||.+||+.||++|||+.||++.|++.
T Consensus       240 ~~~~~~~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         240 GVPVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             TCCHHHHHHHHHT-TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHc-CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            9999888887765 456678899999999999999999999999999999988753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.8e-49  Score=416.50  Aligned_cols=249  Identities=20%  Similarity=0.289  Sum_probs=212.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++++.||+|+||.||+|+++.++      +.||||+++.........+.++.  .+++.++||||+++++++.+++.
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~Ei--~il~~l~HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATG------RVFVAKFINTPYPLDKYTVKNEI--SIMNQLHHPKLINLHDAFEDKYE  100 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSHHHHHHHHHHH--HHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEECCcchhHHHHHHHHH--HHHHhCCCCCCCcEEEEEEECCE
Confidence            67999999999999999999987665      48999999876544433333332  36677899999999999999999


Q ss_pred             EEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEc--cCCcEEEeccCCcccc
Q 007046          121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EADRAVLGDVGIPHLL  197 (620)
Q Consensus       121 ~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld--~~~~vkL~DFGla~~~  197 (620)
                      +|||||||+| +|.+.+.. ...++++.+++.++.||+.||+|||++||+||||||+|||++  .++.+||+|||+|+.+
T Consensus       101 ~~ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  179 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceec
Confidence            9999999995 55565542 456799999999999999999999999999999999999998  5689999999999876


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC--CCC
Q 007046          198 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIP  275 (620)
Q Consensus       198 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~--~~p  275 (620)
                      ..    ........||+.|||||++.+.   .++.++|||||||++|+|+||..||.+.+..+++..+.......  ..+
T Consensus       180 ~~----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  252 (352)
T d1koba_         180 NP----DEIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF  252 (352)
T ss_dssp             CT----TSCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTT
T ss_pred             CC----CCceeeccCcccccCHHHHcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            42    2233456899999999999754   68999999999999999999999999999999988887765432  345


Q ss_pred             CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          276 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       276 ~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ..+|+++.+||.+||++||++|||+.|+++
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            689999999999999999999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-50  Score=408.05  Aligned_cols=264  Identities=24%  Similarity=0.371  Sum_probs=211.3

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQ  112 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~  112 (620)
                      ..|+.++|++.++||+|+||.||+|++.....   ....||||++++...   ...+.+.++.  .+++.++||||++++
T Consensus         3 ~~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~---~~~~vAiK~l~~~~~~~~~~~~~~~~Ei--~~l~~l~H~nIv~~~   77 (273)
T d1u46a_           3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSG---KTVSVAVKCLKPDVLSQPEAMDDFIREV--NAMHSLDHRNLIRLY   77 (273)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTS---CEEEEEEEC--------CHHHHHHHHHH--HHHHHCCCTTBCCEE
T ss_pred             eEEchHHeEEEEEEecCCCeEEEEEEEECCCC---cEEEEEEEEEChhhcCCHHHHHHHHHHH--HHHHhCCCCCEEEEE
Confidence            46889999999999999999999998765432   335799999976432   2223333333  356667999999999


Q ss_pred             EEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          113 GISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       113 g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      ++|.+ +.+++|||||+ |++.+.+.. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+||
T Consensus        78 g~~~~-~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~Df  155 (273)
T d1u46a_          78 GVVLT-PPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF  155 (273)
T ss_dssp             EEECS-SSCEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCC
T ss_pred             EEEee-cchheeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccc
Confidence            99965 56789999998 566665553 5567999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      |+++.+..............||+.|||||.+.+.   .++.++||||||+++|||+| |..||.+.+..++...+.....
T Consensus       156 Gl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~  232 (273)
T d1u46a_         156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE  232 (273)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC
T ss_pred             hhhhhcccCCCcceecCccccCcccCCHHHHhCC---CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCC
Confidence            9999874432222233445688999999999754   68899999999999999998 8999999999999999988877


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .++.+..+|+++.+||.+||..||++|||+.+|++.|+.
T Consensus       233 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            788889999999999999999999999999999998865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-48  Score=399.95  Aligned_cols=258  Identities=21%  Similarity=0.310  Sum_probs=203.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|++.+.||+|+||.||+|++..++      +.||||+++.......  ...+.++. .+++..+||||+++++++..
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~~E~-~~l~~~~hpniv~~~~~~~~   78 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLH------RDVAVKVLRADLARDPSFYLRFRREA-QNAAALNHPAIVAVYDTGEA   78 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSTTTTCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEEEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCC------CEEEEEEEchhhccCHHHHHHHHHHH-HHHHhcCCCCCCcccceeee
Confidence            467999999999999999999987665      5899999986543222  22222222 35677899999999999886


Q ss_pred             CC----EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          118 NG----KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       118 ~~----~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      .+    .+|||||||+| +|.+.+.  ..+++++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~  156 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG  156 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCT
T ss_pred             ccCCCceEEEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhh
Confidence            43    48999999995 5555544  34689999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      +++...............+||+.|||||++.+.   .++.++|||||||++|||+||.+||.+.+..+++..+......+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~  233 (277)
T d1o6ya_         157 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP  233 (277)
T ss_dssp             TCEECC----------------TTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             hhhhhccccccccccccccCcccccCHHHHcCC---CCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC
Confidence            988764433333344567899999999999644   68999999999999999999999999999888877776655433


Q ss_pred             --CCCCCCCHHHHHHHHHhhhcCcCCCC-CHHHHHHHHHh
Q 007046          273 --PIPSGLPPAVENVLLGCFEYDLRSRP-LMTDILRVFKS  309 (620)
Q Consensus       273 --~~p~~~s~~l~~Li~~cL~~dP~~RP-s~~eil~~L~~  309 (620)
                        .....+|+++.++|.+||++||++|| +++++++.|.+
T Consensus       234 ~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         234 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence              24568999999999999999999999 89999887654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-48  Score=404.76  Aligned_cols=283  Identities=22%  Similarity=0.296  Sum_probs=229.5

Q ss_pred             cccCCcchhhhhhccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHH
Q 007046           16 EVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERL   95 (620)
Q Consensus        16 e~~~~~~~l~~~~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~   95 (620)
                      .+|.+|.+|+.      .....|+.++|++.++||+|+||.||+|+++.... ...++.||||+++..........+.++
T Consensus         4 ~~~~~~~~~~~------~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~~E   76 (311)
T d1t46a_           4 YVYIDPTQLPY------DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVKMLKPSAHLTEREALMSE   76 (311)
T ss_dssp             TCCCCTTTSCC------CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSS-TTCEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred             ceeeCcccCCC------cccccCCHHHeEEeeEEeecCCeEEEEEEEecccc-CCCCeEEEEEEECcccCHHHHHHHHHH
Confidence            35556544332      22445899999999999999999999999875432 356789999999876654444444444


Q ss_pred             HHHHHHccCCCceeEeEEEEEECCEEEEEEecCCC-ChHHHHHHhc----------------CCCCCHHHHHHHHHHHHH
Q 007046           96 NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLK----------------GGKLSLSNVFRYAIDLAQ  158 (620)
Q Consensus        96 ~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE~~~G-sLld~l~~~~----------------~~~l~~~~~~~i~~qIa~  158 (620)
                      ..++.++.+|||||+++++|...+.+|||||||+| ++.+.+....                ...+++..+..++.||+.
T Consensus        77 ~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~  156 (311)
T d1t46a_          77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK  156 (311)
T ss_dssp             HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            44555566899999999999999999999999995 6666654322                236899999999999999


Q ss_pred             HHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHH
Q 007046          159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG  238 (620)
Q Consensus       159 gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwS  238 (620)
                      ||+|||+++++||||||+|||++.++.+||+|||+++...... .........||+.|||||.+.+   +.++.++||||
T Consensus       157 gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DIwS  232 (311)
T d1t46a_         157 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFN---CVYTFESDVWS  232 (311)
T ss_dssp             HHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHHH---CCCCHHHHHHH
T ss_pred             HHHHHHhCCeeecccccccccccccCcccccccchheeccCCC-cceEeeecccChHHcCHHHhcC---CCCCCcccccc
Confidence            9999999999999999999999999999999999998764322 1222345689999999999963   46899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          239 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       239 lGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      |||++|||+| |.+||.+.+..+.+..+......+..+..+|+++.+||.+||+.||++||++.+|++.|++
T Consensus       233 ~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            9999999999 6777877777676666766777777888999999999999999999999999999998876

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.5e-48  Score=395.89  Aligned_cols=254  Identities=21%  Similarity=0.226  Sum_probs=212.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--------HHHHHHHHHHHHHHHccCCCceeEe
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--------RMRVLLERLNDLFLKCQGVEGICWL  111 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--------~~~~~~~~~~~~~l~~~~h~nIv~l  111 (620)
                      .++|++.+.||+|+||+||+|++..++      +.||||+++.....        .......++..++.++..||||+++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~------~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~   75 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTC------KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   75 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCC------CEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence            478999999999999999999986655      58999999764321        1122222333345555569999999


Q ss_pred             EEEEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEec
Q 007046          112 QGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD  190 (620)
Q Consensus       112 ~g~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~D  190 (620)
                      ++++.+++.+|||||||+ |+|.+++..  .+++++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        76 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~D  153 (277)
T d1phka_          76 KDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD  153 (277)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             EeecccCcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEcc
Confidence            999999999999999998 577777753  46899999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCC---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  267 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~  267 (620)
                      ||+++.+..    ........||+.|+|||.+.+.   ....++.++||||+||++|||++|+.||.+.+..++.+.+..
T Consensus       154 FG~a~~~~~----~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~  229 (277)
T d1phka_         154 FGFSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS  229 (277)
T ss_dssp             CTTCEECCT----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             chheeEccC----CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHh
Confidence            999987643    2233456899999999998632   234578899999999999999999999999999998888887


Q ss_pred             ccCCCC--CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          268 RQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       268 ~~~~~~--~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ......  ...++|+++++||.+||++||++||+++|+++
T Consensus       230 ~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         230 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            654433  33579999999999999999999999999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-48  Score=401.97  Aligned_cols=262  Identities=19%  Similarity=0.340  Sum_probs=208.1

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH-HHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-MRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~-~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .++.++|++++.||+|+||+||+|++..+++.  ....||+|.++...... .+.+.++.  .+++.++|||||+++++|
T Consensus         5 ~~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~--~~l~~l~HpnIv~l~g~~   80 (317)
T d1xkka_           5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIKELREATSPKANKEILDEA--YVMASVDNPHVCRLLGIC   80 (317)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECC------CCEEEEEEEECC----CTHHHHHHHH--HHHHHCCCTTBCCEEEEE
T ss_pred             cCCHHHCEEeeEEecCCCeEEEEEEEcCCCCE--EEEEEEEEEeccccCHHHHHHHHHHH--HHHHhCCCCCEeeEEEEE
Confidence            35677899999999999999999998776542  23469999997644332 33333333  255667999999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCc
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP  194 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla  194 (620)
                      .+++ .+++|||+. |+|.+.+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|
T Consensus        81 ~~~~-~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla  158 (317)
T d1xkka_          81 LTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA  158 (317)
T ss_dssp             ESSS-EEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHH
T ss_pred             ecCC-eeEEEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccc
Confidence            8654 566677776 677777654 5678999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          195 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       195 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      +...... .........||+.|||||++.+.   .++.++|||||||++|||+| |.+||.+.+..++...+..+ ..++
T Consensus       159 ~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~---~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~  233 (317)
T d1xkka_         159 KLLGAEE-KEYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLP  233 (317)
T ss_dssp             HHTTTTC-C--------CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT-CCCC
T ss_pred             eeccccc-ccccccccccCccccChHHHhcC---CCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCC
Confidence            8864322 12223345699999999998643   69999999999999999999 89999998888888777654 4556


Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          274 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       274 ~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      .|..+++++.+||.+||..||++|||+.+|++.|..
T Consensus       234 ~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         234 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence            788999999999999999999999999999987665

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.2e-48  Score=400.17  Aligned_cols=268  Identities=19%  Similarity=0.282  Sum_probs=221.1

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      .++..++|++.++||+|+||+||+|+++... +..++..||||+++..........+.++. .+++.++||||+++++++
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~E~-~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLL-PYEPFTMVAVKMLKEEASADMQADFQREA-ALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSS-TTSSEEEEEEEECCTTCCHHHHHHHHHHH-HHHHTCCCTTBCCEEEEE
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCc-cCCCCeEEEEEEEChhcChHHHHHHHHHH-HHHHhcCCCCcccceeee
Confidence            3456788999999999999999999986543 24566789999998765544443333333 356778999999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeec
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLN  172 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~----------------------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrD  172 (620)
                      ...+..+++|||++ |+|.+++....                      ...+++..++.++.||+.||+|||+++|+|||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            99999999999998 67777664321                      23488999999999999999999999999999


Q ss_pred             ccCCcEEEccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCC-C
Q 007046          173 LKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV-Q  251 (620)
Q Consensus       173 LKP~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~-~  251 (620)
                      |||+|||++.++.+||+|||+|+...... ......+..||+.|||||.+.+.   .++.++|||||||++|||++|. +
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~---~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EcccceEECCCCcEEEccchhheeccCCc-cccccCCCCcCcCcCCHHHHccC---CCChhhhhccchhhHHHHHccCCC
Confidence            99999999999999999999998764321 12233456789999999999743   7999999999999999999985 7


Q ss_pred             CCCCCCHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          252 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       252 Pf~~~~~~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ||.+.+..++...+.... .+..|..+|+++.+||.+||+.||++|||+.+|++.|++.
T Consensus       242 p~~~~~~~e~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         242 PYYGMAHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            899999999998887654 5667889999999999999999999999999999988864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-48  Score=396.94  Aligned_cols=260  Identities=22%  Similarity=0.337  Sum_probs=209.7

Q ss_pred             CCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        34 ~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      ....|+.++|++.+.||+|+||.||+|+++.+.       .||||+++...... ..+.++.  .+++.++|+|||++++
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~-------~vAiK~l~~~~~~~-~~~~~E~--~~l~~l~h~nIv~~~g   79 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSP-EAFLQEA--QVMKKLRHEKLVQLYA   79 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTE-------EEEEEECCTTSSCH-HHHHHHH--HHHHHCCCTTBCCEEE
T ss_pred             cceEcCHHHEEEeeEEeeCCCeEEEEEEECCCC-------EEEEEEECcccCCH-HHHHHHH--HHHHhcccCCEeEEEE
Confidence            355688999999999999999999999976543       69999997655433 3344433  3567789999999999


Q ss_pred             EEEECCEEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++. ++.+|+|||||++ ++.+.+.......+++.+++.++.||+.||+|||+++|+||||||+||||+.++.+||+|||
T Consensus        80 ~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfG  158 (285)
T d1fmka3          80 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG  158 (285)
T ss_dssp             EEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred             EEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccc
Confidence            985 4568999999995 56666654455679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhccCC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      +++......  ........||+.|||||++..   +.++.++|||||||++|||+|| .+||.+....+++..+.... .
T Consensus       159 la~~~~~~~--~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~-~  232 (285)
T d1fmka3         159 LARLIEDNE--YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-R  232 (285)
T ss_dssp             TTC----------------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-C
T ss_pred             hhhhccCCC--ceeeccccccccccChHHHhC---CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-C
Confidence            998764221  122344579999999999964   4789999999999999999995 56667778888888776543 4


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      ++.+..+++++.+||.+||+.||++||++++|++.|+..
T Consensus       233 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         233 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            557889999999999999999999999999999988764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-48  Score=400.51  Aligned_cols=264  Identities=19%  Similarity=0.243  Sum_probs=215.3

Q ss_pred             CCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        35 ~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      -++|+.++|++.++||+|+||+||+|+++.++..    ..||||.++..........+.++..++.++.+|||||+++++
T Consensus         4 ~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~   79 (309)
T d1fvra_           4 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLR----MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA   79 (309)
T ss_dssp             SSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEE----EEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEE
T ss_pred             CCccCHHHcEEEEEEeeCCCcEEEEEEECCCCeE----EEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEE
Confidence            5678999999999999999999999998776532    358899987554433333333333344444489999999999


Q ss_pred             EEECCEEEEEEecCC-CChHHHHHHh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEE
Q 007046          115 SVINGKICIIMKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI  179 (620)
Q Consensus       115 ~~~~~~~~IVmE~~~-GsLld~l~~~--------------~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NIL  179 (620)
                      +..++.+||||||++ |+|.+++...              ....+++..+..++.||+.||.|||+++|+||||||+|||
T Consensus        80 ~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL  159 (309)
T d1fvra_          80 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  159 (309)
T ss_dssp             EEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEE
Confidence            999999999999999 6777766431              2467999999999999999999999999999999999999


Q ss_pred             EccCCcEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCH
Q 007046          180 LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSV  258 (620)
Q Consensus       180 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~  258 (620)
                      ++.++.+||+|||+++....    ........||+.|+|||.+.+   +.++.++|||||||++|||++| .+||.+.+.
T Consensus       160 ~~~~~~~kl~DfG~a~~~~~----~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~  232 (309)
T d1fvra_         160 VGENYVAKIADFGLSRGQEV----YVKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC  232 (309)
T ss_dssp             ECGGGCEEECCTTCEESSCE----ECCC----CCTTTCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             EcCCCceEEccccccccccc----cccccceecCCcccchHHhcc---CCCCccceeehhHHHHHHHHhcCCCCCCCCCH
Confidence            99999999999999986532    122234579999999999964   3689999999999999999996 468999999


Q ss_pred             HHHHHHHHhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       259 ~ei~~~i~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      .++++.+..+ ..+..|..+++++.+||.+||+.||++|||+.+|++.|++.
T Consensus       233 ~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i  283 (309)
T d1fvra_         233 AELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  283 (309)
T ss_dssp             HHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            9998887654 45667889999999999999999999999999999987764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-47  Score=394.34  Aligned_cols=252  Identities=23%  Similarity=0.278  Sum_probs=207.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|+++++||+|+||+||+|++..++      +.||||+++......  ...+.++.  .+++.++||||+++++++.++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~Ei--~il~~l~Hp~Iv~~~~~~~~~   73 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTG------EVVALKKIRLDTETEGVPSTAIREI--SLLKELNHPNIVKLLDVIHTE   73 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEC-------CCHHHHHHH--HHHTTCCCTTBCCEEEEEEET
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcChHHHHHHHHHH--HHHHhCCCCcEEEeccccccc
Confidence            68999999999999999999987765      489999997544322  22233322  356788999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +.+||||||+.|++++.+.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        74 ~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             TEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             cceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceecc
Confidence            99999999999988888876667789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-----
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----  273 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-----  273 (620)
                      .   .........||+.|+|||.+...  ..++.++|+|||||++|+|++|+.||.+.+..+.+..+......+.     
T Consensus       154 ~---~~~~~~~~~gt~~y~apE~~~~~--~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         154 V---PVRTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             C---CSBCTTCCBCCCTTCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             C---Ccccceeecccceeeehhhhccc--cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcc
Confidence            3   22334456899999999987643  2357899999999999999999999999888776666543221111     


Q ss_pred             ----------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 ----------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 ----------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                            ....+++++.+||.+||.+||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                                  01356899999999999999999999999997

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-47  Score=398.77  Aligned_cols=249  Identities=18%  Similarity=0.265  Sum_probs=210.3

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      .++|++.+.||+|+||+||+|+++.++      +.||||+++....+. ..+. ++. .+++.++||||+++++++.+++
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~------~~~AiK~i~~~~~~~-~~~~-~Ei-~il~~l~HpnIv~~~~~~~~~~   74 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSK------KTYMAKFVKVKGTDQ-VLVK-KEI-SILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECCCTHHH-HHHH-HHH-HHHHHSCCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCC------cEEEEEEEcCCcccH-HHHH-HHH-HHHHhCCCCCCCeEEEEEEECC
Confidence            367999999999999999999987765      489999998765443 2222 222 3567789999999999999999


Q ss_pred             EEEEEEecCCC-ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC--CcEEEeccCCccc
Q 007046          120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHL  196 (620)
Q Consensus       120 ~~~IVmE~~~G-sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~--~~vkL~DFGla~~  196 (620)
                      .+|||||||+| +|.+++.. ...++++.++..|+.||+.||+|||++||+||||||+|||++.+  ..+||+|||+++.
T Consensus        75 ~~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~  153 (321)
T d1tkia_          75 ELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhc
Confidence            99999999995 67766643 34579999999999999999999999999999999999999854  5899999999987


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--C
Q 007046          197 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--I  274 (620)
Q Consensus       197 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~--~  274 (620)
                      ...    ........||+.|||||.+.+.   .++.++|||||||++|+|++|..||.+.+..+++..+.......+  .
T Consensus       154 ~~~----~~~~~~~~~t~~y~ape~~~~~---~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~  226 (321)
T d1tkia_         154 LKP----GDNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA  226 (321)
T ss_dssp             CCT----TCEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             ccc----CCcccccccccccccchhccCC---CCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhh
Confidence            632    2223456799999999998644   688999999999999999999999999999999998877654332  2


Q ss_pred             CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       275 p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +..+|+++++||.+||.+||++|||+.|+++
T Consensus       227 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         227 FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2478999999999999999999999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-47  Score=392.31  Aligned_cols=248  Identities=22%  Similarity=0.240  Sum_probs=199.9

Q ss_pred             EEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH----HHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR----VLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        45 i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~----~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      .++.||+|+||+||+|+++.++      +.||||+++........    ....++. .+++.++|||||++++++..++.
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~~~Ei-~il~~l~hpnIv~~~~~~~~~~~   74 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTN------QIVAIKKIKLGHRSEAKDGINRTALREI-KLLQELSHPNIIGLLDAFGHKSN   74 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCC------SEEEEEEC------------CTHHHHHH-HHHHHCCCTTBCCEEEEECCTTC
T ss_pred             cceEeccCcCeEEEEEEECCCC------cEEEEEEEehhhhhhhhHHHHHHHHHHH-HHHHhCCCCCEeEEEeeeccCCc
Confidence            4688999999999999977655      48999999764432221    1122222 35677899999999999999999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcccccCC
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI  200 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~~~  200 (620)
                      +|||||||.|+++..+.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus        75 ~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          75 ISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             eeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC
Confidence            999999999877766653 5678999999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC-------
Q 007046          201 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-------  273 (620)
Q Consensus       201 ~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~-------  273 (620)
                         .......+||+.|||||++.+.  ..++.++|||||||++|||+||.+||.+.+..+.+..+.+....+.       
T Consensus       154 ---~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         154 ---NRAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             ---CCCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             ---cccccceecChhhccHHHHccC--CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccch
Confidence               2333456899999999998632  3578999999999999999999999999998888777765322111       


Q ss_pred             -------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 -------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 -------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                         ....+++++.+||.+||++||++|||++|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence                               01356899999999999999999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-47  Score=400.77  Aligned_cols=247  Identities=19%  Similarity=0.256  Sum_probs=197.3

Q ss_pred             CCCeeEEee-eeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           40 PSALKLRHR-IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        40 ~~~y~i~~~-IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      .++|+++++ ||+|+||.||+|++..++      +.||||+++....      ..++..+++++.+||||+++++++.+ 
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~------~~~E~~~~~~~~~hpnIv~l~~~~~~~   77 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQ------EKFALKMLQDCPK------ARREVELHWRASQCPHIVRIVDVYENL   77 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTC------CEEEEEEEECSHH------HHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCC------CEEEEEEECCcHH------HHHHHHHHHHhcCCCCCCeEEEEEeec
Confidence            368998864 999999999999987665      4899999964321      12233345667799999999999876 


Q ss_pred             ---CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEec
Q 007046          118 ---NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGD  190 (620)
Q Consensus       118 ---~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~D  190 (620)
                         +..+|||||||+ |+|.+++......++++.++..|+.||+.||+|||++||+||||||+|||++.   ++.+||+|
T Consensus        78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccc
Confidence               457999999998 57888776433467999999999999999999999999999999999999985   46799999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+|+....    .......+||+.|||||++.+.   .|+.++|||||||++|+|+||++||.+.+..+....+.....
T Consensus       158 FG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~---~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~  230 (335)
T d2ozaa1         158 FGFAKETTS----HNSLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  230 (335)
T ss_dssp             CTTCEECCC----CCCCCCCSCCCSSCCCCCCCGG---GGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC
T ss_pred             cceeeeccC----CCccccccCCcccCCcHHHcCC---CCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh
Confidence            999987643    2234556899999999999754   688999999999999999999999988766555544433222


Q ss_pred             C--CCCC----CCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 I--PPIP----SGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~--~~~p----~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .  ..+|    ..+|+++.+||++||++||++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         231 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             SCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1  1122    358999999999999999999999999998

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=389.97  Aligned_cols=252  Identities=22%  Similarity=0.342  Sum_probs=206.0

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..|+.++|++.++||+|+||.||+|.++.        ..||||+++.+...  +.+.++.  .+++.++||||++++++|
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~vAvK~i~~~~~~--~~~~~E~--~~l~~l~HpnIv~~~g~~   69 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRG--------NKVAVKCIKNDATA--QAFLAEA--SVMTQLRHSNLVQLLGVI   69 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETT--------EEEEEEECCCCC----HHHHHTH--HHHTTCCCTTBCCEEEEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECC--------eEEEEEEECcHHHH--HHHHHHH--HHHHhCCCCCEeeEEEEE
Confidence            45888999999999999999999998742        36999999765432  3333333  356677999999999998


Q ss_pred             EE-CCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          116 VI-NGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       116 ~~-~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      .+ .+.+||||||++ |+|.+++.......+++..+++++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+
T Consensus        70 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~  149 (262)
T d1byga_          70 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL  149 (262)
T ss_dssp             CCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred             EecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccccc
Confidence            65 456899999998 5777777554445689999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  272 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~ei~~~i~~~~~~~  272 (620)
                      ++...      .......+|+.|||||++.+   +.++.++|||||||++|||+| |++||...+..++...+..+ ..+
T Consensus       150 s~~~~------~~~~~~~~~~~y~aPE~l~~---~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~-~~~  219 (262)
T d1byga_         150 TKEAS------STQDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKM  219 (262)
T ss_dssp             ------------------CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-CCC
T ss_pred             ceecC------CCCccccccccCCChHHHhC---CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence            98653      22344578999999999864   378999999999999999998 79999999888888887544 556


Q ss_pred             CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          273 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       273 ~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ++|..+++++.+||++||..||++|||+.++++.|+.
T Consensus       220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         220 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            7888999999999999999999999999999998865

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-47  Score=392.90  Aligned_cols=253  Identities=17%  Similarity=0.249  Sum_probs=206.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHH-HHHHccCCCceeEeEEEEEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLND-LFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~-~~l~~~~h~nIv~l~g~~~~  117 (620)
                      ++|+++++||+|+||+||+|++..++.     +.||||+++......  .....++... ..++..+||||++++++|..
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~-----~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~   81 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   81 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTT-----EEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCC-----EEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecc
Confidence            689999999999999999999865542     579999987533211  1112222221 12344589999999999864


Q ss_pred             -----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          118 -----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       118 -----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                           ...+|++|||+.|+++..........+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        82 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          82 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             EECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchh
Confidence                 246899999999988887776677889999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-  271 (620)
                      +++....    ........||+.|||||++.+.   +|+.++|||||||++|||++|++||.+.+..+.+..+...... 
T Consensus       162 ~~~~~~~----~~~~~~~~gT~~Y~APE~~~~~---~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  234 (305)
T d1blxa_         162 LARIYSF----QMALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP  234 (305)
T ss_dssp             SCCCCCG----GGGGCCCCCCCTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             hhhhhcc----cccCCCcccChhhcCcchhcCC---CCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCC
Confidence            9876532    2233456899999999999654   7899999999999999999999999999988877776542111 


Q ss_pred             ------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                              ..++..+++++.+||.+||++||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             chhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                    1134568999999999999999999999999997

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-47  Score=393.03  Aligned_cols=269  Identities=19%  Similarity=0.295  Sum_probs=222.0

Q ss_pred             CCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEE
Q 007046           36 AWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGIS  115 (620)
Q Consensus        36 ~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~  115 (620)
                      ..|++++|++.++||+|+||+||+|.++.... ...+..||||+++..........+.++. .+++.++||||+++++++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~-~~~~~~VAvK~~~~~~~~~~~~~~~~E~-~il~~l~h~nIv~~~~~~   92 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVK-DEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHVVRLLGVV   92 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEET-TEEEEEEEEEECCTTSCHHHHHHHHHHH-HHGGGCCCTTBCCEEEEE
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCccc-CCCCcEEEEEEECcccChHHHHHHHHHH-HHHHHcCCCCEeeeeeEE
Confidence            45999999999999999999999999876432 2334689999998655444333333333 356677899999999999


Q ss_pred             EECCEEEEEEecCC-CChHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          116 VINGKICIIMKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       116 ~~~~~~~IVmE~~~-GsLld~l~~~~--------~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      ..++..++|||||+ |++.+++....        ...+++..+..++.|++.||.|||+++|+||||||+|||++.++++
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~  172 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  172 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceE
Confidence            99999999999998 66766654321        1357889999999999999999999999999999999999999999


Q ss_pred             EEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHH
Q 007046          187 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAV  265 (620)
Q Consensus       187 kL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~ei~~~i  265 (620)
                      ||+|||+++.+..... ........||+.|||||.+.+.   .++.++||||||+++|||+|| .+||.+.+..+++..+
T Consensus       173 Kl~DFGla~~~~~~~~-~~~~~~~~~t~~y~aPe~l~~~---~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i  248 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV  248 (308)
T ss_dssp             EECCTTCCCGGGGGGC-EEGGGSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred             EEeecccceeccCCcc-eeeccceecccccCCHHHHccC---CCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999999987643211 1122344689999999998644   688999999999999999997 5889999999999888


Q ss_pred             HhccCCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhCC
Q 007046          266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSDG  311 (620)
Q Consensus       266 ~~~~~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~~  311 (620)
                      .+.. .+..|..+++++.++|.+||+.||++|||+.+|++.|++..
T Consensus       249 ~~~~-~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         249 MEGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             HTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HhCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            7654 46678899999999999999999999999999999998753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.5e-46  Score=380.87  Aligned_cols=250  Identities=20%  Similarity=0.272  Sum_probs=204.3

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH--HHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~--~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|+++++||+|+||+||+|+++ ++      +.||||+++......  ...+.++.  .+++.++||||+++++++..+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~------~~vAvK~i~~~~~~~~~~~~~~~E~--~il~~l~hpnIv~~~~~~~~~   72 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YG------ETFALKKIRLEKEDEGIPSTTIREI--SILKELKHSNIVKLYDVIHTK   72 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TS------CEEEEEEECCSSGGGCCCHHHHHHH--HGGGGCCCTTBCCEEEEEECS
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CC------CEEEEEEEehhhcChHHHHHHHHHH--HHHHhCCCCcEEeeeeecccC
Confidence            68999999999999999999874 22      479999997654322  23333332  356778999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      +..|++||++.|++++.+.. ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++....
T Consensus        73 ~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~  151 (286)
T d1ob3a_          73 KRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (286)
T ss_dssp             SCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             CceeEEEEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecc
Confidence            99999999999888887764 56789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------  272 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~------  272 (620)
                      ..   ........||+.|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+..+.+..+......+      
T Consensus       152 ~~---~~~~~~~~~~~~y~~pE~~~~~--~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (286)
T d1ob3a_         152 IP---VRKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (286)
T ss_dssp             C------------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cC---ccccceecccchhhhHHHHhCC--CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhcc
Confidence            31   2233445799999999998643  357899999999999999999999999988877766654322111      


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 ---------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           .....+++++.+||++||++||++|||++|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                 123567899999999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-45  Score=381.73  Aligned_cols=264  Identities=19%  Similarity=0.276  Sum_probs=204.6

Q ss_pred             cCCCCeeE--EeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEE
Q 007046           38 IKPSALKL--RHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGI  114 (620)
Q Consensus        38 I~~~~y~i--~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~  114 (620)
                      ++++.+.+  .++||+|+||+||+|++..++.   ....||||+++....... ..+.++.  .+++.++||||++++++
T Consensus        22 ~~~~~~~~~~~~~iG~G~fg~Vyk~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~E~--~~l~~l~HpnIv~~~g~   96 (311)
T d1r0pa_          22 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEG--IIMKDFSHPNVLSLLGI   96 (311)
T ss_dssp             CCGGGEEEEEEEEEEEETTEEEEEEEECC-------CEEEEEEEECCCCCHHHHHHHHHHH--HHHHTCCCTTBCCCCEE
T ss_pred             eChHHceeccceEEeecCCeEEEEEEEECCCC---EEEEEEEEEECcccCHHHHHHHHHHH--HHHHhCCCCCEeEEeEE
Confidence            33444443  6789999999999999876532   234699999976544333 3344433  25566789999999999


Q ss_pred             EEE-CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          115 SVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       115 ~~~-~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                      +.. ++.+|+|||||+++++..+.......+++..++.++.|++.||.|||+.+|+||||||+|||+++++.+||+|||+
T Consensus        97 ~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~  176 (311)
T d1r0pa_          97 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL  176 (311)
T ss_dssp             EEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGG
T ss_pred             EEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccc
Confidence            876 5689999999996555554444566788999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCC-CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhccCC
Q 007046          194 PHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       194 a~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~-~~~~~ei~~~i~~~~~~  271 (620)
                      ++........ ........||+.|+|||.+..   +.++.++||||||+++|||+||..||. ..+..++...+..+ ..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g-~~  252 (311)
T d1r0pa_         177 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RR  252 (311)
T ss_dssp             GCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT-CC
T ss_pred             hhhccccccccceecccccccccccChHHHhc---CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CC
Confidence            9877543222 222334579999999999864   468999999999999999999766654 44555666666655 45


Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHhC
Q 007046          272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSD  310 (620)
Q Consensus       272 ~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~~  310 (620)
                      +..|..+++++.+||.+||+.||++||++.||++.|++.
T Consensus       253 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         253 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            567889999999999999999999999999999987764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-46  Score=385.15  Aligned_cols=241  Identities=18%  Similarity=0.210  Sum_probs=194.1

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhH------HHHHHHHHHHHHHHcc-CCCceeEeEE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR------MRVLLERLNDLFLKCQ-GVEGICWLQG  113 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~------~~~~~~~~~~~~l~~~-~h~nIv~l~g  113 (620)
                      ++|++.+.||+|+||.||+|++..++      +.||||++++.....      ...+.. +..++.++. .||||+++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~~~~~-E~~il~~l~~~h~nIv~~~~   76 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDN------LPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKVSSGFSGVIRLLD   76 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEEGGGCCCEEECTTCCEEEH-HHHHHHHHCSSSCSBCCEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCC------CEEEEEEEehHHccchhhhhHHHHHHH-HHHHHHHhccCCCCccEEEE
Confidence            57999999999999999999987665      489999997532111      011112 222333332 4999999999


Q ss_pred             EEEECCEEEEEEecCCC--ChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccC-CcEEEec
Q 007046          114 ISVINGKICIIMKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGD  190 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~G--sLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~-~~vkL~D  190 (620)
                      ++.+++..|+||||+.|  ++.+.+.  ....+++.++..++.||+.||+|||+++|+||||||+|||++.+ +.+||+|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          77 WFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             EEeeCCeEEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECc
Confidence            99999999999999974  4555554  34689999999999999999999999999999999999999855 7999999


Q ss_pred             cCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Q 007046          191 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE  270 (620)
Q Consensus       191 FGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~  270 (620)
                      ||+|+....     ......+||+.|||||++.+.  ..++.++|||||||++|||+||+.||.+.+      .+...  
T Consensus       155 FG~a~~~~~-----~~~~~~~GT~~y~aPE~~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~--  219 (273)
T d1xwsa_         155 FGSGALLKD-----TVYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRG--  219 (273)
T ss_dssp             CTTCEECCS-----SCBCCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHC--
T ss_pred             cccceeccc-----ccccccccCCCcCCHHHHcCC--CCCCcccccccceeeehhHhhCCCCCCCch------HHhhc--
Confidence            999987532     334567899999999998643  124577999999999999999999997532      23323  


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...++..+|+++++||.+||++||++|||++|+++
T Consensus       220 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         220 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            34567889999999999999999999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.3e-45  Score=377.05  Aligned_cols=256  Identities=20%  Similarity=0.251  Sum_probs=199.4

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      ++|++.++||+|+||.||+|++..++      +.||||++.......  . +..+.+++..+.+|++|+.+.+++..++.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~~--~-~~~E~~i~~~l~~~~~i~~~~~~~~~~~~   77 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAG------EEVAIKLECVKTKHP--Q-LHIESKIYKMMQGGVGIPTIRWCGAEGDY   77 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTT------EEEEEEEEESCTTSC--C-HHHHHHHHHHSTTSTTCCCEEEEEEETTE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCC------CEEEEEEEchhccCH--H-HHHHHHHHHHccCCCcccEEEEEEecCCE
Confidence            57999999999999999999987655      489999987654322  1 22233344445556667777888888999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc---CCcEEEeccCCcccc
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLL  197 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~---~~~vkL~DFGla~~~  197 (620)
                      .++||||++|++.+.+.. ....+++..+..++.|++.||+|||++||+||||||+|||++.   +..+||+|||+|+.+
T Consensus        78 ~~ivme~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          78 NVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             EEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             EEEEEEEcCCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence            999999999988877654 5678999999999999999999999999999999999999863   457999999999987


Q ss_pred             cCCCCC----CCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcc-
Q 007046          198 LGIPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV---RRQ-  269 (620)
Q Consensus       198 ~~~~~~----~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~---~~~-  269 (620)
                      ......    ........||+.|||||++.+.   +++.++|||||||++|||+||..||...........+.   ... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~  233 (299)
T d1ckia_         157 RDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  233 (299)
T ss_dssp             BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTB---CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHH
T ss_pred             cccccccceeccccCCcCCCccccCHHHHhCC---CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccC
Confidence            543221    1223456899999999999754   68999999999999999999999998766544332221   111 


Q ss_pred             --CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          270 --EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       270 --~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                        ..+..+.++|+++.++|.+||+.||++||++.+|.+.|+.
T Consensus       234 ~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  275 (299)
T d1ckia_         234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  275 (299)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHH
T ss_pred             CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence              1122456899999999999999999999999988776554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-46  Score=389.37  Aligned_cols=285  Identities=18%  Similarity=0.274  Sum_probs=221.8

Q ss_pred             CcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCch---hHHHHHHHHHHHHHHHccCCCceeEeEE
Q 007046           37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKE---DRMRVLLERLNDLFLKCQGVEGICWLQG  113 (620)
Q Consensus        37 ~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~---~~~~~~~~~~~~~~l~~~~h~nIv~l~g  113 (620)
                      .+..++|++++.||+|+||+||+|++....   .+++.||||++++...   ........++..++.++.+||||+++++
T Consensus        20 ~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~   96 (322)
T d1vzoa_          20 KVGIENFELLKVLGTGAYGKVFLVRKISGH---DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY   96 (322)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSST---TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred             ccchhceEEEEEEecCCCeEEEEEEECccC---CCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeee
Confidence            356689999999999999999999875432   2456899999875321   1111112223334455556699999999


Q ss_pred             EEEECCEEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          114 ISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       114 ~~~~~~~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      ++.+...+|++|||+. |+|.+.+.  ..+.+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        97 ~~~~~~~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG  174 (322)
T d1vzoa_          97 AFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG  174 (322)
T ss_dssp             EEEETTEEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             eeccCCceeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeecc
Confidence            9999999999999999 56666665  34577899999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--cC
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QE  270 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~--~~  270 (620)
                      +++.+....  ........||+.|+|||.+.+. ...++.++|||||||++|+|++|+.||.+.+..+....+...  ..
T Consensus       175 ~a~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~-~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~  251 (322)
T d1vzoa_         175 LSKEFVADE--TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS  251 (322)
T ss_dssp             EEEECCGGG--GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC
T ss_pred             chhhhcccc--cccccccccccccchhHHhhcC-CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC
Confidence            998764321  2223456899999999998753 235788999999999999999999999876544433333322  23


Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCcCCCC-----CHHHHHH-HHHhCCCCCCCCCccCCCCCCCCc
Q 007046          271 IPPIPSGLPPAVENVLLGCFEYDLRSRP-----LMTDILR-VFKSDGGWTGHGSRILPDKSSSGY  329 (620)
Q Consensus       271 ~~~~p~~~s~~l~~Li~~cL~~dP~~RP-----s~~eil~-~L~~~~~~~~~~~~~~~~~~~~~~  329 (620)
                      .+.+|..+++++.+||.+||++||++||     +++|+++ .+.+..+|.....+..++|..|..
T Consensus       252 ~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~  316 (322)
T d1vzoa_         252 EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVI  316 (322)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCC
Confidence            4567789999999999999999999999     4889987 566677777777777777777653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-45  Score=383.22  Aligned_cols=263  Identities=21%  Similarity=0.204  Sum_probs=209.7

Q ss_pred             hhhhccCCCCCCCcCCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccC
Q 007046           25 RTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG  104 (620)
Q Consensus        25 ~~~~~~s~~~~~~I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~  104 (620)
                      +++++++...+.....-+|+.++.||+|+||+||+|++..++      +.||||+++.......     ++. .+++.++
T Consensus         4 ~~~~~~~~~~p~~~~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~-----~Ei-~il~~l~   71 (350)
T d1q5ka_           4 TTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG------ELVAIKKVLQDKRFKN-----REL-QIMRKLD   71 (350)
T ss_dssp             EEEEEEESSSSCCCEEEEEEEEEEEEEETTEEEEEEEETTTC------CEEEEEEEECCSSSCC-----HHH-HHHHHCC
T ss_pred             cccccCCCCCCCCcccCCcEeeeEEeeCcCeEEEEEEECCCC------CEEEEEEECccchHHH-----HHH-HHHHhcC
Confidence            445555555444444447999999999999999999987665      4899999976543221     122 2456679


Q ss_pred             CCceeEeEEEEEEC------CEEEEEEecCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCC
Q 007046          105 VEGICWLQGISVIN------GKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF  176 (620)
Q Consensus       105 h~nIv~l~g~~~~~------~~~~IVmE~~~GsLld~l~~~--~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~  176 (620)
                      |+||++++++|...      .++|||||||++++.+.+...  ....+++.+++.++.||+.||+|||++||+||||||+
T Consensus        72 h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~  151 (350)
T d1q5ka_          72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQ  151 (350)
T ss_dssp             CTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGG
T ss_pred             CCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcc
Confidence            99999999998653      358999999998877766532  4567999999999999999999999999999999999


Q ss_pred             cEEEccCC-cEEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 007046          177 NFILNEAD-RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  255 (620)
Q Consensus       177 NILld~~~-~vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~  255 (620)
                      |||++.++ .+||+|||+++....    .....+.+||+.|+|||.+.+.  ..++.++|||||||++|||++|+.||..
T Consensus       152 NILl~~~~~~~kl~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DIwSlG~il~el~~g~~pf~~  225 (350)
T d1q5ka_         152 NLLLDPDTAVLKLCDFGSAKQLVR----GEPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPG  225 (350)
T ss_dssp             GEEECTTTCCEEECCCTTCEECCT----TSCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             eEEEecCCCceeEecccchhhccC----CcccccccccccccChHHhhcc--cCCCcceeecccceEEEehhhCCCCCCC
Confidence            99999775 899999999987643    2234456899999999987643  3588999999999999999999999999


Q ss_pred             CCHHHHHHHHHhccCC------------------C---------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          256 RSVDEIYDAVVRRQEI------------------P---------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       256 ~~~~ei~~~i~~~~~~------------------~---------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      .+..+.+..+.+....                  +         .....+++++.+||.+||.+||++|||+.|+++
T Consensus       226 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            8887776666432110                  0         112457899999999999999999999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.3e-44  Score=370.18  Aligned_cols=257  Identities=19%  Similarity=0.255  Sum_probs=205.9

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING  119 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~  119 (620)
                      -++|++.++||+|+||+||+|++..++      +.||||+++......  .+ .++...+..+.+|+|++.+++++..+.
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~------~~vAvK~~~~~~~~~--~~-~~e~~~~~~l~~~~~i~~~~~~~~~~~   74 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNN------QQVAIKFEPRRSDAP--QL-RDEYRTYKLLAGCTGIPNVYYFGQEGL   74 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTT------EEEEEEEEECCTTSC--CH-HHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEccccCcH--HH-HHHHHHHHHhcCCCCCCEEEEEeecCC
Confidence            368999999999999999999987665      489999986544321  11 222234455567799999999999999


Q ss_pred             EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEcc-----CCcEEEeccCCc
Q 007046          120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-----ADRAVLGDVGIP  194 (620)
Q Consensus       120 ~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~-----~~~vkL~DFGla  194 (620)
                      ..|+||||+.|+|.+.+.. ....+++.++..++.|++.||+|||++||+||||||+|||++.     ++.+||+|||+|
T Consensus        75 ~~~~vme~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          75 HNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             EEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ccEEEEEecCCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEccccee
Confidence            9999999999998887754 5668999999999999999999999999999999999999974     578999999999


Q ss_pred             ccccCCCC----CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHh
Q 007046          195 HLLLGIPL----PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVR  267 (620)
Q Consensus       195 ~~~~~~~~----~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~---~~ei~~~i~~  267 (620)
                      +.+.....    ........+||+.|||||++.+.   .++.++|||||||++|||+||..||.+..   ..+.+..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~---~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~  230 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE  230 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH
T ss_pred             EEcccCccccceeecccCceEEchhhcCHHHhcCC---CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh
Confidence            98754221    12234456899999999999754   68999999999999999999999997643   3334444433


Q ss_pred             ccCC---CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          268 RQEI---PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       268 ~~~~---~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                      ....   ..++..+|+++.+++..|+..+|++||+++.+.+.|..
T Consensus       231 ~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~  275 (293)
T d1csna_         231 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK  275 (293)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             ccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            2221   22446799999999999999999999999888775554

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-45  Score=382.22  Aligned_cols=248  Identities=21%  Similarity=0.249  Sum_probs=196.5

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH-HHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM-RVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~-~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      .++|+++++||+|+||+||+|+++.++      +.||||+++....... .....++. .+++.++||||++++++|...
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~Ei-~il~~l~hpniv~l~~~~~~~   89 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTG------AKVAIKKLYRPFQSELFAKRAYREL-RLLKHMRHENVIGLLDVFTPD   89 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTC------CEEEEEECSSTTSSHHHHHHHHHHH-HHHHHCCBTTBCCCSEEECSC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCC------CEEEEEEEchhhcChHHHHHHHHHH-HHHHhcCCCCeeEEEEEeccC
Confidence            678999999999999999999987665      4899999976443222 22222222 356677999999999999765


Q ss_pred             C------EEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccC
Q 007046          119 G------KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG  192 (620)
Q Consensus       119 ~------~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFG  192 (620)
                      +      .+|||||||++++.....   ..++++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        90 ~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg  166 (346)
T d1cm8a_          90 ETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  166 (346)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ccccccceEEEEEecccccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccccccccccc
Confidence            4      579999999766655543   4679999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-
Q 007046          193 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-  271 (620)
Q Consensus       193 la~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~-  271 (620)
                      +|+...      ...+...||+.|||||.+.+.  ..++.++|||||||++|+|++|+.||.+.+..+.+..+...... 
T Consensus       167 ~a~~~~------~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~  238 (346)
T d1cm8a_         167 LARQAD------SEMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP  238 (346)
T ss_dssp             TCEECC------SSCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ceeccC------CccccccccccccCHHHHcCC--CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCC
Confidence            998763      234567899999999998642  35788999999999999999999999988876665544332111 


Q ss_pred             ----------------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ----------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ----------------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                  ......+++++.+||.+||..||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         239 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                        1133567999999999999999999999999998

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-44  Score=378.88  Aligned_cols=253  Identities=18%  Similarity=0.209  Sum_probs=200.2

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEEC--
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN--  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~--  118 (620)
                      ++|+++++||+|+||+||+|+++.++      +.||||+++............++. .+++.++||||+++++++...  
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~Ei-~il~~l~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNK------VRVAIKKISPFEHQTYCQRTLREI-KILLRFRHENIIGINDIIRAPTI   80 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTC------SEEEEEEECCTTCHHHHHHHHHHH-HHHHHCCCTTBCCCCEEECCSST
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCC------cEEEEEEEehhcChHHHHHHHHHH-HHHHHcCCCCCCcEEEEEeeccc
Confidence            46999999999999999999987665      489999997655433322222222 356667999999999998754  


Q ss_pred             ---CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          119 ---GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       119 ---~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                         ..+|++|+++.|+|.+.+..   .++++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~  157 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  157 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccceEEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCcee
Confidence               34778877777888888753   479999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC---
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---  272 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~---  272 (620)
                      ...............+||+.|+|||.+...  ..++.++|+||+||++|+|++|+.||.+.+..+...........+   
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (345)
T d1pmea_         158 VADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  235 (345)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCGGGTTTB--CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             eccCCCccceeeccccccceechHHHhhcC--CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChh
Confidence            765433333344567899999999998533  357889999999999999999999999887765554443211111   


Q ss_pred             --------------------------CCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          273 --------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       273 --------------------------~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                                .....+++++.+||.+||++||++|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                      012467889999999999999999999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-44  Score=372.35  Aligned_cols=255  Identities=22%  Similarity=0.240  Sum_probs=200.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      .++|+++++||+|+||+||+|++..++      +.||||++......  ....+.++.  .+++.++|+||+++++++..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E~--~il~~l~h~nii~~~~~~~~   80 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTG------QKVALKKVLMENEKEGFPITALREI--KILQLLKHENVVNLIEICRT   80 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEC----CTTSSCHHHHHHH--HHHHHCCCTTBCCEEEEEEC
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCC------CEEEEEEEehhhcchHHHHHHHHHH--HHHHHhcCCCccceEeeeec
Confidence            478999999999999999999987665      48999998654322  122233332  35667799999999999855


Q ss_pred             --------CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEe
Q 007046          118 --------NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG  189 (620)
Q Consensus       118 --------~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~  189 (620)
                              ++.+|+||||+.++++..... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        81 ~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~  159 (318)
T d3blha1          81 KASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA  159 (318)
T ss_dssp             ----------CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             ccccccccCceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEee
Confidence                    345899999999877776653 45789999999999999999999999999999999999999999999999


Q ss_pred             ccCCcccccCCCC-CCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Q 007046          190 DVGIPHLLLGIPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR  268 (620)
Q Consensus       190 DFGla~~~~~~~~-~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~  268 (620)
                      |||+++.+..... ........+||+.|+|||.+.+.  ..++.++|||||||++|||++|+.||.+.+..+....+...
T Consensus       160 dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~--~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~  237 (318)
T d3blha1         160 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL  237 (318)
T ss_dssp             CCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ecceeeecccccccccccccceecCHHHhhHHHHcCC--CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence            9999987643221 12233456899999999998643  25889999999999999999999999998887777666543


Q ss_pred             cCCCC--CCC----------------------------CCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          269 QEIPP--IPS----------------------------GLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       269 ~~~~~--~p~----------------------------~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      ...+.  ...                            ..++++.+||.+||++||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            32211  000                            12678889999999999999999999998

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=362.52  Aligned_cols=251  Identities=20%  Similarity=0.282  Sum_probs=204.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh--HHHHHHHHHHHHHHHccCCCceeEeEEEEEEC
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED--RMRVLLERLNDLFLKCQGVEGICWLQGISVIN  118 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~--~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~  118 (620)
                      ++|+++++||+|+||+||+|++..++      +.||||+++.....  ....+.++.  .+++.++|+||+++++++...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~E~--~il~~l~h~niv~~~~~~~~~   73 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETH------EIVALKRVRLDDDDEGVPSSALREI--CLLKELKHKNIVRLHDVLHSD   73 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTC------CEEEEEEEESSCSSTTHHHHHHHHH--HHHTTCCCTTBCCEEEEEECS
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCC------cEEEEEEEehhhCChHHHHHHHHHH--HHHHhcCcCCEEeeccccccc
Confidence            68999999999999999999987665      48999999765432  223333333  356778999999999999999


Q ss_pred             CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCCccccc
Q 007046          119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL  198 (620)
Q Consensus       119 ~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGla~~~~  198 (620)
                      ...++|||++.|.++..+.. ..+.+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||.++...
T Consensus        74 ~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~  152 (292)
T d1unla_          74 KKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             SEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhccc
Confidence            99999999999877766654 56789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHhccCC------
Q 007046          199 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVDEIYDAVVRRQEI------  271 (620)
Q Consensus       199 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf-~~~~~~ei~~~i~~~~~~------  271 (620)
                      .   .........+++.|+|||.+.+.  ..++.++|||||||++|||++|..|| .+.+..+.+..+......      
T Consensus       153 ~---~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (292)
T d1unla_         153 I---PVRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW  227 (292)
T ss_dssp             S---CCSCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred             C---CCccceeeccccchhhhhHhccC--CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhh
Confidence            3   22233345678999999998643  24688999999999999999999885 555666666655432211      


Q ss_pred             ---------------------CCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 ---------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ---------------------~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                           ...+..+++++.+||.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                 1133467899999999999999999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-44  Score=372.08  Aligned_cols=255  Identities=21%  Similarity=0.294  Sum_probs=194.8

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECC-
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVING-  119 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~-  119 (620)
                      ++|.+.++||+|+||.||+|++.        ++.||||+++....   ..+..+.+...+...+||||+++++++...+ 
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--------g~~vAvK~~~~~~~---~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~   71 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--------GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--------TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--------CEEEEEEEECccch---hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCC
Confidence            46999999999999999999852        35799999965432   2222222222344578999999999998754 


Q ss_pred             ---EEEEEEecCC-CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeeecccCCcEEEccCCcEE
Q 007046          120 ---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------KGILVLNLKPFNFILNEADRAV  187 (620)
Q Consensus       120 ---~~~IVmE~~~-GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs--------~gIiHrDLKP~NILld~~~~vk  187 (620)
                         .+|||||||+ |+|.+.+.+   .++++..++.++.|++.||+|||+        ++|+||||||+|||++.++.+|
T Consensus        72 ~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K  148 (303)
T d1vjya_          72 TWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  148 (303)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred             cceEEEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence               6899999998 566666643   468999999999999999999996        5899999999999999999999


Q ss_pred             EeccCCcccccCCCCC-CCCCCCcCCCCCCCCcccccCCCC---CCCCchhhHHHHHHHHHHHHhCCCCCCC--------
Q 007046          188 LGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLTGVQPRCG--------  255 (620)
Q Consensus       188 L~DFGla~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~~~~---~~~s~~sDVwSlGvil~elltG~~Pf~~--------  255 (620)
                      |+|||+++........ ........||+.|||||++.+...   ..++.++|||||||++|||+||..||..        
T Consensus       149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~  228 (303)
T d1vjya_         149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             EEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccch
Confidence            9999999887543221 123345689999999999865321   1356789999999999999999887632        


Q ss_pred             -------CCHHHHHHHHHhccCCCCCCCC-----CCHHHHHHHHHhhhcCcCCCCCHHHHHHHHHh
Q 007046          256 -------RSVDEIYDAVVRRQEIPPIPSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  309 (620)
Q Consensus       256 -------~~~~ei~~~i~~~~~~~~~p~~-----~s~~l~~Li~~cL~~dP~~RPs~~eil~~L~~  309 (620)
                             .....+.+.+......+.++..     .+..+.+|+.+||+.||++|||+.||++.|..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             hhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence                   1234445544444455555433     33568999999999999999999999987765

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.7e-43  Score=367.21  Aligned_cols=254  Identities=18%  Similarity=0.272  Sum_probs=196.2

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEE-
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVI-  117 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~-  117 (620)
                      +.++|+++++||+|+||+||+|++..++      +.||||+++......   +. ++..++..+.+||||+++++++.. 
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~------~~vAiK~i~~~~~~~---~~-~Ei~il~~l~~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNN------EKVVVKILKPVKKKK---IK-REIKILENLRGGPNIITLADIVKDP  102 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSSCHHH---HH-HHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCC------CEEEEEEECHHHHHH---HH-HHHHHHHhccCCCCCcEEEEEEEec
Confidence            4578999999999999999999987665      589999997655322   22 233345555579999999999985 


Q ss_pred             -CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCC-cEEEeccCCcc
Q 007046          118 -NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPH  195 (620)
Q Consensus       118 -~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~-~vkL~DFGla~  195 (620)
                       ...+|+|||||.++.+..+    ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+
T Consensus       103 ~~~~~~~v~e~~~~~~L~~~----~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~  178 (328)
T d3bqca1         103 VSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  178 (328)
T ss_dssp             TTCSEEEEEECCCSCBGGGT----TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred             CCCceeEEEeecCCCcHHHH----hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccce
Confidence             3569999999996544332    34799999999999999999999999999999999999998765 68999999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhc------
Q 007046          196 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRR------  268 (620)
Q Consensus       196 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~-~ei~~~i~~~------  268 (620)
                      ....    .......+||+.|+|||.+.+.  ..++.++|+|||||++|||++|..||..... .+....+...      
T Consensus       179 ~~~~----~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~  252 (328)
T d3bqca1         179 FYHP----GQEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL  252 (328)
T ss_dssp             ECCT----TCCCCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred             eccC----CCcccccccCccccCcccccCC--CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchh
Confidence            7643    2234556899999999998643  2578999999999999999999999976442 2222221110      


Q ss_pred             -------c----------------------CCCCCCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH-HHHhCCC
Q 007046          269 -------Q----------------------EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR-VFKSDGG  312 (620)
Q Consensus       269 -------~----------------------~~~~~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~-~L~~~~~  312 (620)
                             .                      ........+++++.+||++||.+||++|||++|+++ .+++...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         253 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             HHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             hhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                   0                      001112347899999999999999999999999998 3444333

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-43  Score=371.55  Aligned_cols=247  Identities=20%  Similarity=0.222  Sum_probs=190.7

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHH-HHHHHHHHHHHHccCCCceeEeEEEEEE--
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR-VLLERLNDLFLKCQGVEGICWLQGISVI--  117 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~-~~~~~~~~~~l~~~~h~nIv~l~g~~~~--  117 (620)
                      ++|+++++||+|+||+||+|+++.++      +.||||+++........ ....++. .+++.++||||++++++|..  
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~------~~vAvK~i~~~~~~~~~~~~~~~Ei-~il~~l~hpnIv~~~~~f~~~~   89 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLD------RNVAIKKLSRPFQNQTHAKRAYREL-VLMKCVNHKNIISLLNVFTPQK   89 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTT------EEEEEEEEESTTSSHHHHHHHHHHH-HHHHHCCCTTBCCCSEEECSCC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCC------CEEEEEEEChhhcCHHHHHHHHHHH-HHHHhcCCCCeeEEEEEEeccc
Confidence            67999999999999999999987665      58999999865433222 2222222 35667799999999999864  


Q ss_pred             ----CCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEeccCC
Q 007046          118 ----NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI  193 (620)
Q Consensus       118 ----~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DFGl  193 (620)
                          ...+|+|||||.|++++.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+
T Consensus        90 ~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1          90 TLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             STTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             ccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhh
Confidence                36899999999998887663    5689999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Q 007046          194 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  273 (620)
Q Consensus       194 a~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~~~  273 (620)
                      ++....    .......+||+.|+|||++.+.   .++.++|+||+||++|+|++|+.||.+.+.......+......+.
T Consensus       166 ~~~~~~----~~~~~~~~~t~~y~aPE~l~~~---~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~  238 (355)
T d2b1pa1         166 ARTAGT----SFMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC  238 (355)
T ss_dssp             -------------------CCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             hhcccc----ccccccccccccccChhhhcCC---CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCC
Confidence            876532    2333456899999999999754   688999999999999999999999998887766655543221100


Q ss_pred             --------------------C--------------------CCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          274 --------------------I--------------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       274 --------------------~--------------------p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                                          .                    +...++++.+||++||.+||++|||++|+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                0                    0113678899999999999999999999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-43  Score=369.37  Aligned_cols=247  Identities=21%  Similarity=0.242  Sum_probs=195.6

Q ss_pred             CCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHH--HHHHHHHHHHHHHccCCCceeEeEEEEEE
Q 007046           40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM--RVLLERLNDLFLKCQGVEGICWLQGISVI  117 (620)
Q Consensus        40 ~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~--~~~~~~~~~~~l~~~~h~nIv~l~g~~~~  117 (620)
                      +++|+++++||+|+||+||+|++..++      +.||||+++.......  ..+.+ +. .+++.++|+||+++++++..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~------~~vAiK~i~~~~~~~~~~~~~~~-Ei-~il~~l~h~~iv~~~~~~~~   88 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTG------LRVAVKKLSRPFQSIIHAKRTYR-EL-RLLKHMKHENVIGLLDVFTP   88 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTT------EEEEEEECSCTTSSHHHHHHHHH-HH-HHHHHCCCTTBCCCSEEECS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCC------CEEEEEEECchhcChHHHHHHHH-HH-HHHHhcCCCCeeeEEEEEee
Confidence            688999999999999999999987665      5899999986543322  22222 22 35677799999999999864


Q ss_pred             C------CEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcEEEecc
Q 007046          118 N------GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV  191 (620)
Q Consensus       118 ~------~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~vkL~DF  191 (620)
                      .      ..+|++|+++.|+|.+++   ..+++++.++..++.||+.||+|||++||+||||||+|||++.++.+|++||
T Consensus        89 ~~~~~~~~~~~i~~~~~gg~L~~~~---~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~df  165 (348)
T d2gfsa1          89 ARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF  165 (348)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             ccccccCceEEEEEeecCCchhhhc---ccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccccccccc
Confidence            2      235555555556776665   3467999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Q 007046          192 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  271 (620)
Q Consensus       192 Gla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ei~~~i~~~~~~  271 (620)
                      |++....      ....+..||+.|+|||.+.+.  ..++.++|+|||||++|+|++|..||.+.+.......+......
T Consensus       166 g~a~~~~------~~~~~~~g~~~y~apE~~~~~--~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~  237 (348)
T d2gfsa1         166 GLARHTD------DEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT  237 (348)
T ss_dssp             ----CCT------GGGSSSCHHHHTSCHHHHTTC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             chhcccC------cccccccccccccCchhhcCC--ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            9987652      233456899999999987643  24678999999999999999999999998887777766544322


Q ss_pred             CC-----------------------------CCCCCCHHHHHHHHHhhhcCcCCCCCHHHHHH
Q 007046          272 PP-----------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  305 (620)
Q Consensus       272 ~~-----------------------------~p~~~s~~l~~Li~~cL~~dP~~RPs~~eil~  305 (620)
                      +.                             ....+++++.+||.+||..||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         238 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            11                             11367899999999999999999999999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-37  Score=327.42  Aligned_cols=251  Identities=20%  Similarity=0.264  Sum_probs=183.3

Q ss_pred             CCCCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHH---HH------HHHccCCCcee
Q 007046           39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN---DL------FLKCQGVEGIC  109 (620)
Q Consensus        39 ~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~---~~------~l~~~~h~nIv  109 (620)
                      .-.+|+++++||+|+||+||+|++..++      +.||||+++...... ....++..   .+      ......|+||+
T Consensus        11 ~~~rY~i~~~LG~G~fg~Vy~~~~~~~g------~~vAvKvi~~~~~~~-~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv   83 (362)
T d1q8ya_          11 KDARYILVRKLGWGHFSTVWLAKDMVNN------THVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNTKEDSMGANHIL   83 (362)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTT------EEEEEEEECSCHHHH-HHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred             cCCcEEEEEEEeeCCCeEEEEEEECCCC------CEEEEEEEeccccch-HHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence            3356999999999999999999987665      489999998654321 11111111   00      11223578999


Q ss_pred             EeEEEEEE--CCEEEEEEecCC--CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeecccCCcEEEccCC
Q 007046          110 WLQGISVI--NGKICIIMKFYE--GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEAD  184 (620)
Q Consensus       110 ~l~g~~~~--~~~~~IVmE~~~--GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-~gIiHrDLKP~NILld~~~  184 (620)
                      ++++++..  ....+++|+++.  ++............+++..+..++.||+.||+|||+ .||+||||||+|||++.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_          84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             CCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             EEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence            99998864  356666766665  344444444456789999999999999999999998 8999999999999998765


Q ss_pred             c------EEEeccCCcccccCCCCCCCCCCCcCCCCCCCCcccccCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 007046          185 R------AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV  258 (620)
Q Consensus       185 ~------vkL~DFGla~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~  258 (620)
                      .      ++++|||.+.....      .....+||+.|+|||++.+   ..++.++|+||+||++++|++|+.||.....
T Consensus       164 ~~~~~~~~kl~dfg~s~~~~~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~el~~g~~pF~~~~~  234 (362)
T d1q8ya_         164 SPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLG---APWGCGADIWSTACLIFELITGDFLFEPDEG  234 (362)
T ss_dssp             TTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHT---CCCCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             cccccceeeEeeccccccccc------ccccccccccccChhhccc---cCCCccccccchHHHHHHHHHCCCCCCCCcc
Confidence            3      89999999986532      3345689999999999874   3688999999999999999999999975432


Q ss_pred             H------HHHHHHHhcc----------------------------------------CCCCCCCCCCHHHHHHHHHhhhc
Q 007046          259 D------EIYDAVVRRQ----------------------------------------EIPPIPSGLPPAVENVLLGCFEY  292 (620)
Q Consensus       259 ~------ei~~~i~~~~----------------------------------------~~~~~p~~~s~~l~~Li~~cL~~  292 (620)
                      .      +.........                                        .....+...++++.+||.+||++
T Consensus       235 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~  314 (362)
T d1q8ya_         235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL  314 (362)
T ss_dssp             ----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCS
T ss_pred             ccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCC
Confidence            1      1111111000                                        00111223467899999999999


Q ss_pred             CcCCCCCHHHHHH
Q 007046          293 DLRSRPLMTDILR  305 (620)
Q Consensus       293 dP~~RPs~~eil~  305 (620)
                      ||.+|||++|+|+
T Consensus       315 dP~~Rpta~e~L~  327 (362)
T d1q8ya_         315 DPRKRADAGGLVN  327 (362)
T ss_dssp             STTTCBCHHHHHT
T ss_pred             ChhHCcCHHHHhc
Confidence            9999999999997

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=4.9e-22  Score=190.32  Aligned_cols=135  Identities=12%  Similarity=0.078  Sum_probs=97.3

Q ss_pred             eeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchh----------------HHHHHHHHHHHHHHHccCCC
Q 007046           43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED----------------RMRVLLERLNDLFLKCQGVE  106 (620)
Q Consensus        43 y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~----------------~~~~~~~~~~~~~l~~~~h~  106 (620)
                      +.+.++||+|+||+||+|++.       +++.||||+++.....                .........+...+....|.
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~   74 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL   74 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             chhCCEeeeCcceEEEEEECC-------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCC
Confidence            457899999999999999863       2358999997642110                00000111111234556788


Q ss_pred             ceeEeEEEEEECCEEEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeecccCCcEEEccCCcE
Q 007046          107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA  186 (620)
Q Consensus       107 nIv~l~g~~~~~~~~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs~gIiHrDLKP~NILld~~~~v  186 (620)
                      +++..+++.  .  .+++|||+++...        ..++...+..++.||+.+|.|||++||+||||||+|||++++ .+
T Consensus        75 ~v~~~~~~~--~--~~lvme~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          75 AVPKVYAWE--G--NAVLMELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             SSCCEEEEE--T--TEEEEECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EE
T ss_pred             CcceEEEec--C--CEEEEEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CE
Confidence            888877653  2  3799999997432        124556677899999999999999999999999999999864 58


Q ss_pred             EEeccCCcccc
Q 007046          187 VLGDVGIPHLL  197 (620)
Q Consensus       187 kL~DFGla~~~  197 (620)
                      +|+|||+|+..
T Consensus       142 ~liDFG~a~~~  152 (191)
T d1zara2         142 WIIDFPQSVEV  152 (191)
T ss_dssp             EECCCTTCEET
T ss_pred             EEEECCCcccC
Confidence            99999998765

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.02  E-value=1.8e-05  Score=76.46  Aligned_cols=140  Identities=13%  Similarity=0.057  Sum_probs=82.9

Q ss_pred             CCeeEEeeeeccCceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCE
Q 007046           41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGK  120 (620)
Q Consensus        41 ~~y~i~~~IG~G~fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~  120 (620)
                      +.|++.+..+.++.+.||+...  .      +..+.+|............. .++...+..+..+--+.+++.++..++.
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~--~------~~~~vlk~~~~~~~~~~~~~-~~E~~~l~~l~~~vpvP~vl~~~~~~~~   84 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG--E------NENLYLKMTDSRYKGTTYDV-EREKDMMLWLEGKLPVPKVLHFERHDGW   84 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC--S------SCEEEEEEECGGGTTSTTCH-HHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred             hceEEEEcCCCCCCCcEEEEEe--C------CCeEEEEEcCCCcccchhhH-HHHHHHHHHHhccCCCCcEEEEEecCCc
Confidence            4577777766666689998852  1      23578888764332211111 1222222222334446778888888999


Q ss_pred             EEEEEecCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 007046          121 ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-----------------------------------  165 (620)
Q Consensus       121 ~~IVmE~~~GsLld~l~~~~~~~l~~~~~~~i~~qIa~gL~yLHs-----------------------------------  165 (620)
                      .|+||++++|........      +......++.+++..|..||+                                   
T Consensus        85 ~~lv~~~l~G~~~~~~~~------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          85 SNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEEECCSSEEHHHHTT------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             eEEEEEeccccccccccc------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            999999999854432110      001112223333333333332                                   


Q ss_pred             ------------------C------CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          166 ------------------K------GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       166 ------------------~------gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                                        .      .++|+|+.|.|||+++++.+-|.||+.+.
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                              1      26899999999999977666799999764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.48  E-value=0.00032  Score=66.91  Aligned_cols=138  Identities=13%  Similarity=0.033  Sum_probs=76.4

Q ss_pred             eeeccC-ceEEEEEEEcCCCcCCCcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEEECCEEEEEEe
Q 007046           48 RIGRGP-FGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMK  126 (620)
Q Consensus        48 ~IG~G~-fG~Vyka~~~~t~ed~~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~~~~~~~IVmE  126 (620)
                      .+..|. -+.||+....       .+..+.+|..................  .+.... -.+.+++.++.+++..++||+
T Consensus        17 ~~~~G~s~~~v~r~~~~-------~~~~~vlK~~~~~~~~~l~~E~~~l~--~L~~~g-vpvP~v~~~~~~~~~~~~v~~   86 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-------GRPVLFVKTDLSGALNELQDEAARLS--WLATTG-VPCAAVLDVVTEAGRDWLLLG   86 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-------TSCCEEEEEECSCTTSCHHHHHHHHH--HHHTTT-CCBCCEEEEEECSSCEEEEEE
T ss_pred             EcCCcccCCeEEEEEeC-------CCCEEEEEeCCccCHhHHHHHHHHHH--HHHhcC-CCCCceeeecccccceEEEEE
Confidence            344444 3679988632       23458899876654433322222221  222222 237778888888888999999


Q ss_pred             cCCCChHH---------------HHHHhcC-----CCC--CHHHHHHHH--------------------HHHHHHHHHHH
Q 007046          127 FYEGSVGD---------------RMAQLKG-----GKL--SLSNVFRYA--------------------IDLAQGILQLH  164 (620)
Q Consensus       127 ~~~GsLld---------------~l~~~~~-----~~l--~~~~~~~i~--------------------~qIa~gL~yLH  164 (620)
                      +++|..+.               .+.++..     .++  .......-.                    ......+..+.
T Consensus        87 ~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  166 (255)
T d1nd4a_          87 EVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK  166 (255)
T ss_dssp             CCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred             eeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHH
Confidence            99873221               1111111     001  011000000                    01222344444


Q ss_pred             HC-------CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          165 SK-------GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       165 s~-------gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      ..       .++|+|+.|.|||++.+..+-|+||+.+.
T Consensus       167 ~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         167 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            33       27999999999999987667899999764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.0013  Score=67.69  Aligned_cols=29  Identities=10%  Similarity=0.061  Sum_probs=24.9

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      .++|+|+.|.|||++.+ .++|+||-.|..
T Consensus       224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH-ETKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSS-CEEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCC-ceEEechhhccc
Confidence            48999999999999865 489999987754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.03  E-value=0.041  Score=55.73  Aligned_cols=86  Identities=15%  Similarity=0.108  Sum_probs=48.4

Q ss_pred             cCCCCeeEEeeeeccCceEEEEEEEcCCCcCC-CcceEEEEEEecCCchhHHHHHHHHHHHHHHHccCCCceeEeEEEEE
Q 007046           38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDC-DEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISV  116 (620)
Q Consensus        38 I~~~~y~i~~~IG~G~fG~Vyka~~~~t~ed~-~~~~~VAIK~l~~~~~~~~~~~~~~~~~~~l~~~~h~nIv~l~g~~~  116 (620)
                      ++.+++++ ++|+.|---.+|++......... ...+.|.+++.-.... ...  ..++..++..+..+.-..++++++.
T Consensus        40 ~~~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~-~id--r~~E~~i~~~ls~~gl~Pkll~~~~  115 (395)
T d1nw1a_          40 VPLEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-ESH--LVAESVIFTLLSERHLGPKLYGIFS  115 (395)
T ss_dssp             CCGGGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-HHH--HHHHHHHHHHHHHTTSSSCEEEEET
T ss_pred             CCccceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcch-hhH--HHHHHHHHHHHHhCCCCCeEEEEcC
Confidence            45566666 46888888999999865432111 2334677777653222 111  1122222322333433567777763


Q ss_pred             ECCEEEEEEecCCCC
Q 007046          117 INGKICIIMKFYEGS  131 (620)
Q Consensus       117 ~~~~~~IVmE~~~Gs  131 (620)
                        +  .+||||++|.
T Consensus       116 --~--g~I~efi~g~  126 (395)
T d1nw1a_         116 --G--GRLEEYIPSR  126 (395)
T ss_dssp             --T--EEEECCCCEE
T ss_pred             --C--ceEEEEeccc
Confidence              2  6889999873

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.76  E-value=0.077  Score=52.14  Aligned_cols=28  Identities=11%  Similarity=-0.015  Sum_probs=22.7

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCccc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPHL  196 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~~  196 (620)
                      ++||+|+.|.|||++. + ..+.||+-|..
T Consensus       193 ~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            5899999999999974 3 45889997653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.80  E-value=0.21  Score=48.18  Aligned_cols=29  Identities=17%  Similarity=0.104  Sum_probs=26.0

Q ss_pred             CCeeecccCCcEEEccCCcEEEeccCCcc
Q 007046          167 GILVLNLKPFNFILNEADRAVLGDVGIPH  195 (620)
Q Consensus       167 gIiHrDLKP~NILld~~~~vkL~DFGla~  195 (620)
                      |+||+|+.+.||+++.+...-|.||+.+.
T Consensus       184 giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         184 GVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccCCcchhhhhcccccceeEecccccc
Confidence            69999999999999988777899999764