Query 007049
Match_columns 620
No_of_seqs 120 out of 550
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 18:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007049.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007049hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 6E-165 1E-169 1379.4 39.1 526 2-611 330-872 (876)
2 TIGR00834 ae anion exchange pr 100.0 6E-160 1E-164 1367.3 38.0 524 2-612 339-896 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 1E-145 2E-150 1197.5 0.9 457 1-544 2-510 (510)
4 COG0659 SUL1 Sulfate permease 99.2 3.9E-10 8.5E-15 127.5 20.7 327 46-502 33-366 (554)
5 TIGR00815 sulP high affinity s 99.2 1.7E-09 3.8E-14 122.5 20.1 338 48-501 28-375 (563)
6 PRK11660 putative transporter; 99.1 6.2E-09 1.3E-13 118.2 20.5 329 48-498 43-393 (568)
7 TIGR03173 pbuX xanthine permea 98.1 0.00014 3.1E-09 79.5 18.9 266 40-355 5-278 (406)
8 PF00916 Sulfate_transp: Sulfa 98.1 1.8E-05 4E-10 81.4 11.0 123 294-507 146-269 (280)
9 TIGR00801 ncs2 uracil-xanthine 98.1 0.0003 6.5E-09 77.5 21.1 266 40-354 15-293 (415)
10 KOG0236 Sulfate/bicarbonate/ox 97.8 0.0017 3.8E-08 75.7 22.2 334 48-496 94-439 (665)
11 PRK11412 putative uracil/xanth 97.6 0.011 2.3E-07 66.0 22.0 271 40-354 18-299 (433)
12 TIGR03616 RutG pyrimidine util 97.5 0.014 3E-07 65.0 21.9 121 39-174 39-165 (429)
13 PRK10720 uracil transporter; P 97.2 0.033 7.2E-07 61.9 21.0 253 40-354 24-284 (428)
14 PF00860 Xan_ur_permease: Perm 97.2 0.0091 2E-07 65.2 15.5 271 40-354 11-291 (389)
15 COG2233 UraA Xanthine/uracil p 96.0 0.35 7.7E-06 54.2 18.1 338 40-509 26-376 (451)
16 KOG1292 Xanthine/uracil transp 47.7 4E+02 0.0087 30.9 13.9 54 453-506 343-402 (510)
17 PF13792 Sulfate_tra_GLY: Sulf 45.7 13 0.00027 32.6 1.6 49 48-102 30-79 (84)
18 PF12075 KN_motif: KN motif; 31.0 20 0.00042 27.3 0.4 15 325-339 3-17 (39)
19 PF02109 DAD: DAD family; Int 21.8 2.8E+02 0.0061 25.9 6.2 54 199-252 53-110 (112)
20 KOG0828 Predicted E3 ubiquitin 21.6 8.3E+02 0.018 28.5 10.9 86 224-347 442-530 (636)
21 PF13172 PepSY_TM_1: PepSY-ass 20.9 1.3E+02 0.0027 21.7 3.1 24 122-145 6-29 (34)
22 TIGR00843 benE benzoate transp 20.8 3E+02 0.0064 30.9 7.4 114 49-180 241-354 (395)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-165 Score=1379.41 Aligned_cols=526 Identities=41% Similarity=0.729 Sum_probs=489.1
Q ss_pred CCCCCCccchHhhhhhhccccccccccccccCcceechhHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHHH
Q 007049 2 EESFVPFRGIKNDVEKRLKCYKQDWTGGFRAGFSILAPTTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGII 81 (620)
Q Consensus 2 ~~~~~~f~Gl~~DikrR~P~Y~SD~~Dg~~~~~~~las~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Gii 81 (620)
.+++|+|||+++|+|||+|||+|||+||+| .||+|+++||||||++|+||||++|+++|+|.+||+|+|+|||+||++
T Consensus 330 ~~tgrlFgGl~~DikrR~p~Y~SD~~Da~~--~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~Gii 407 (876)
T KOG1172|consen 330 QRTGRLFGGLVLDIKRRLPHYKSDFRDAFN--IQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGII 407 (876)
T ss_pred ccccccchhHHHHHHhhcCCChHHHHHHhc--cccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999 589999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccccchhhHHHHHHHHHHHHHHHHHHhccccchhccccchhhHHHH
Q 007049 82 HSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGSKLFLAWTGWVCMWTALLLFLLAILGACSIINRFTRIAGELFGL 161 (620)
Q Consensus 82 fslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~~~fl~~~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~ 161 (620)
||+||||||+|+|+|||+++||+++|+||++++. +||+||+|||+|++++|+++|++|+|.+|+|+||||||+||+
T Consensus 408 fslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~----dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~ 483 (876)
T KOG1172|consen 408 FSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL----DYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGL 483 (876)
T ss_pred HHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC----chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999999999999984 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCC-----------------CCCCcccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 007049 162 LIAMLFMQEAIKGIVDEFRVPER-----------------ENPKLIEYQPSWRFANGMFALVLSFGLLHTALRSRKARSW 224 (620)
Q Consensus 162 lIs~iFi~eai~~l~~~f~~~~~-----------------~~~~~~~~~~~~~~~~~lls~iL~~gt~~~a~~l~~fr~s 224 (620)
|||+|||||||++++++|..... .+....++...|.++++++|+++++||+++|+++|+||+|
T Consensus 484 LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s 563 (876)
T KOG1172|consen 484 LISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSS 563 (876)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998874211 1222334556678999999999999999999999999999
Q ss_pred cccCcccccccccchhHHHHHHHHhhccccCcccCCCCccccCCCCCCCCCCCCCceEeccCCCcchHHHHHhhhhHHhh
Q 007049 225 RYGSGCLRGFIADYGVPLMVLVWTAVSYIPARSVPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPLLYIIGAFIPATMI 304 (620)
Q Consensus 225 ~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll 304 (620)
+||++|+|++|+|||+|+||++|++++|+++...+.+++.+...|.+|.+. |||+| ++++++|+|++++|++||+++
T Consensus 564 ~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~~~--rgw~v-~~~~~~P~~~~~~A~ipalll 640 (876)
T KOG1172|consen 564 RYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWPFD--RGWFV-PPFGKNPWWYVFAALIPALLL 640 (876)
T ss_pred CccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCccc--CCeee-CCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998743333444444455555332 99997 567799999999999999999
Q ss_pred hhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCCCCCCCccchhhhHHHHHhhhhhhhhhhh
Q 007049 305 AVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETA 384 (620)
Q Consensus 305 ~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~ga~pqSp~H~~sL~~~~~~~~~~~~v~~~ 384 (620)
+||||||||||++|+||||||||||+||||||+++|++|++||+|||||+|||+||||+|++||+++++
T Consensus 641 ~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~----------- 709 (876)
T KOG1172|consen 641 TILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESE----------- 709 (876)
T ss_pred HHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhc-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred hhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCCCCccccccccccccCcceeeeecchhhH
Q 007049 385 HKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPVDENAFDIEKEIDDLLPVEVKEQRLSNLL 464 (620)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~~~~~~~~e~~i~~~~~v~V~EQRvT~ll 464 (620)
+++|++++++ ++|+||||||++
T Consensus 710 -----------------------------------------------~~apge~~~i-----------~~V~EQRvtgll 731 (876)
T KOG1172|consen 710 -----------------------------------------------TSAPGEQPQI-----------VGVREQRVTGLL 731 (876)
T ss_pred -----------------------------------------------ccCCCCcccc-----------ccchhhhhHHHH
Confidence 3567777644 799999999999
Q ss_pred HHHHHHHHHhhhcccCcccchhhhhHHHHhhcccCCcchHHHHHHHHhcCCCcccccccCCccccccccCccchhhHHHH
Q 007049 465 QSTMVGGCVAAMPLLKRIPTSVLWGYFAFMAIESLPGNQFWERILLIFTAPSRRYKVLENYHATFVETVPFKTILVFTIF 544 (620)
Q Consensus 465 ~~lLig~s~~~~pvL~~IP~aVL~GvFlyMG~sSL~gnq~~~Ri~llf~~~~~~~~~~~~p~~~yvr~Vp~~~ihlFT~i 544 (620)
|++|+|+|+++.|+|++||+|||||+|+|||++||+|||||||++|+|||+||+ |+.+|+||||.||||+||++
T Consensus 732 ~~llvgls~~~~pvL~~IP~~VL~GvFlYMgv~SL~Gnqf~eRl~Llf~p~k~~------p~~~ylrhv~~r~vhlFT~~ 805 (876)
T KOG1172|consen 732 QFLLVGLSVLLLPVLKLIPMPVLYGVFLYMGVSSLPGNQFFERLLLLFMPPKHR------PDTLYLRHVPFRRVHLFTLI 805 (876)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCCccHHHHHHHHHcCCcccC------CCccceeecchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999974 68899999999999999999
Q ss_pred HHHHhHhhheeeechhhHhhHHHHHHHHHHHHhhhcCcCCChhhhhhcCcccccccCCccccccccc
Q 007049 545 QTAYLLVCFGITWVPIAGVLFPVMIMLLVPVRQYVLPRFFKGAHLQDLDAAEYEEAPALSFNLASYL 611 (620)
Q Consensus 545 Ql~~l~~~~~v~~~~~aai~FP~~i~~LvpiR~~llpr~Ft~~eL~~LD~~~~e~~~~~~~~~~~~~ 611 (620)
|++||++|||++|.++++|+||++++++||+|+++|||+|+++||++||++|++++++++-+.+++.
T Consensus 806 Ql~~l~ll~~i~~~~~asi~FP~~ll~lVpiR~~~lp~~f~~~eL~~LD~~~~~~~~~~~~~~~~~~ 872 (876)
T KOG1172|consen 806 QLLCLALLWAIKWSPVASIIFPLMLLLLVPIRQYLLPRLFKPRELQALDANEYEPEPDKPKGEDEKK 872 (876)
T ss_pred HHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHHhhcCHHhhhhhchhhccccccccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999998888776
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=6.4e-160 Score=1367.34 Aligned_cols=524 Identities=27% Similarity=0.503 Sum_probs=474.8
Q ss_pred CCCCCCccchHhhhhhhccccccccccccccCcceechhHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHHH
Q 007049 2 EESFVPFRGIKNDVEKRLKCYKQDWTGGFRAGFSILAPTTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGII 81 (620)
Q Consensus 2 ~~~~~~f~Gl~~DikrR~P~Y~SD~~Dg~~~~~~~las~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Gii 81 (620)
+||+++|||+++|+|||+|||+|||+|||| .||++|++||||||++||||||++|+++|+|.||++|+|+|||+||++
T Consensus 339 ~rtg~~f~Gli~DikRR~p~Y~SD~tDa~~--~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Gii 416 (900)
T TIGR00834 339 QRTGRPFGGLIRDIKRRYPHYLSDFTDALN--PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVL 416 (900)
T ss_pred hhcCCccchHHHHHHhhcccchHHHhhhhc--chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccccchhhHHHHHHHHHHHHHHHHHHhccccchhccccchhhHHHH
Q 007049 82 HSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGSKLFLAWTGWVCMWTALLLFLLAILGACSIINRFTRIAGELFGL 161 (620)
Q Consensus 82 fslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~~~fl~~~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~ 161 (620)
||+||||||+|+|+|||+++|++++|+||++++ .+|++||+|||+|+++||+++|++|+|++|||+||||||+||+
T Consensus 417 fslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~----~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~ 492 (900)
T TIGR00834 417 FALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG----LEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSF 492 (900)
T ss_pred HhhhcCCceEEecCcccHHHHHHHHHHHHhhcC----CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999987 4899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCC--------------CCCCc---------------ccccccccchhHHHHHHHHHHHH
Q 007049 162 LIAMLFMQEAIKGIVDEFRVPER--------------ENPKL---------------IEYQPSWRFANGMFALVLSFGLL 212 (620)
Q Consensus 162 lIs~iFi~eai~~l~~~f~~~~~--------------~~~~~---------------~~~~~~~~~~~~lls~iL~~gt~ 212 (620)
|||+||||||+++++++|..+.. .+.+. ...++.+.++++++|++|++|||
T Consensus 493 lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf 572 (900)
T TIGR00834 493 LISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTF 572 (900)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999874210 00000 00112344788999999999999
Q ss_pred HHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCcccCCCCccccCCCCCCCCCCC--CCceEeccCCCc-
Q 007049 213 HTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPARSVPKGIPRRLFSPNPWSPGAY--ENWTVIKDMLNV- 289 (620)
Q Consensus 213 ~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~--r~W~v~~~~~~~- 289 (620)
++|+++++||+|+||++++|++|+|||+||||++|++++|.++ +++ .+++..|+.+.|+++ |+|+| ++++..
T Consensus 573 ~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~ 647 (900)
T TIGR00834 573 FLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENR 647 (900)
T ss_pred HHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccc
Confidence 9999999999999999999999999999999999999999764 232 245778888888765 99996 456554
Q ss_pred --chHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCCCCCCCccchhh
Q 007049 290 --PLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANGVIPQSPMHTKS 367 (620)
Q Consensus 290 --p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~ga~pqSp~H~~s 367 (620)
|+|++++|++||++++||||||||||++|+|+||||||||+||||||+++|++|++||+|||||+|||+||||+|++|
T Consensus 648 ~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~s 727 (900)
T TIGR00834 648 PFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANA 727 (900)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCCCCccccccccc
Q 007049 368 LATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPVDENAFDIEKEI 447 (620)
Q Consensus 368 L~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~~~~~~~~e~~i 447 (620)
|+++++ ..+||+++++
T Consensus 728 L~v~~~----------------------------------------------------------~~~~Ge~~~i------ 743 (900)
T TIGR00834 728 LTVMSK----------------------------------------------------------ASAPGEKAQI------ 743 (900)
T ss_pred Heeeee----------------------------------------------------------ccCCCCCCcc------
Confidence 987654 1346665533
Q ss_pred cccCcceeeeecchhhHHHHHHHHHHhhhcccCcccchhhhhHHHHhhcccCCcchHHHHHHHHhcCCCcccccccCCcc
Q 007049 448 DDLLPVEVKEQRLSNLLQSTMVGGCVAAMPLLKRIPTSVLWGYFAFMAIESLPGNQFWERILLIFTAPSRRYKVLENYHA 527 (620)
Q Consensus 448 ~~~~~v~V~EQRvT~ll~~lLig~s~~~~pvL~~IP~aVL~GvFlyMG~sSL~gnq~~~Ri~llf~~~~~~~~~~~~p~~ 527 (620)
++|+||||||+++|+|||+|+++.|+|++||+|||||+|+|||++||+|||||+|++++|||+|++ ||.
T Consensus 744 -----~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL~GvFlYMGv~SL~GnQ~~~Ri~llf~p~k~~------P~~ 812 (900)
T TIGR00834 744 -----QEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYMGVTSLSGIQLFDRLLLLLMPPKYH------PDV 812 (900)
T ss_pred -----ceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhcccCHHHHHHHHHhcCcccC------CCc
Confidence 699999999999999999999999999999999999999999999999999999999999999874 678
Q ss_pred ccccccCccchhhHHHHHHHHhHhhheeeechhhHhhHHHHHHHHHHHHhhhcCcCCChhhhhhcCcccccccCCccccc
Q 007049 528 TFVETVPFKTILVFTIFQTAYLLVCFGITWVPIAGVLFPVMIMLLVPVRQYVLPRFFKGAHLQDLDAAEYEEAPALSFNL 607 (620)
Q Consensus 528 ~yvr~Vp~~~ihlFT~iQl~~l~~~~~v~~~~~aai~FP~~i~~LvpiR~~llpr~Ft~~eL~~LD~~~~e~~~~~~~~~ 607 (620)
+|+|+||+||||+||++|++|++++|++++ ++++|+||++|+++||+|++++||+|+++||++||++|.|......-++
T Consensus 813 ~ylr~Vp~~kihlFT~iQl~cl~~l~~ik~-t~aai~FP~~iillVpiR~~llp~~F~~~eL~~LD~~d~~~~~~e~~~~ 891 (900)
T TIGR00834 813 PYVRRVKTWRMHLFTAIQILCLALLWVVKS-TPASLAFPFVLILTVPLRRLLLPRLFTERELKCLDKEDAKVTFDEEDGE 891 (900)
T ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHHHH-HhHHHHhHHHHHHHHHHHHHHHhhcCCHHHHhhhCccccccccccccCc
Confidence 999999999999999999999999999997 5789999999999999999999999999999999998865333222345
Q ss_pred ccccc
Q 007049 608 ASYLQ 612 (620)
Q Consensus 608 ~~~~~ 612 (620)
|+|.+
T Consensus 892 d~y~~ 896 (900)
T TIGR00834 892 DEYNE 896 (900)
T ss_pred ccccc
Confidence 55543
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=1e-145 Score=1197.49 Aligned_cols=457 Identities=35% Similarity=0.678 Sum_probs=67.3
Q ss_pred CCCCCCCccchHhhhhhhccccccccccccccCcceechhHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHH
Q 007049 1 MEESFVPFRGIKNDVEKRLKCYKQDWTGGFRAGFSILAPTTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGI 80 (620)
Q Consensus 1 ~~~~~~~f~Gl~~DikrR~P~Y~SD~~Dg~~~~~~~las~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Gi 80 (620)
.+||+|+|||+++|+|||+|+|+|||+||+| .||++|++||||||++||||||++|+++|+|.+|++|+|+|+++||+
T Consensus 2 l~rtg~~fgGl~~Dikrr~p~Y~SD~~D~~~--~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi 79 (510)
T PF00955_consen 2 LQRTGRLFGGLINDIKRRLPWYWSDFTDGLN--LQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGI 79 (510)
T ss_dssp -------------------STTCHHHCCSS---SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3799999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccccchhhHHHHHHHHHHHHHHHHHHhccccchhccccchhhHHH
Q 007049 81 IHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGSKLFLAWTGWVCMWTALLLFLLAILGACSIINRFTRIAGELFG 160 (620)
Q Consensus 81 ifslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~~~fl~~~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~ 160 (620)
+||+||||||+|+|+|||+++||+++|++|++++ .||++||+|||+|++++|+++|++|+|.+|||+||||||+|+
T Consensus 80 ~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~----~~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~ 155 (510)
T PF00955_consen 80 IFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYG----LDFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFA 155 (510)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999987 489999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCC---------------CCCCc--------------c----------c----------
Q 007049 161 LLIAMLFMQEAIKGIVDEFRVPER---------------ENPKL--------------I----------E---------- 191 (620)
Q Consensus 161 ~lIs~iFi~eai~~l~~~f~~~~~---------------~~~~~--------------~----------~---------- 191 (620)
+|||+|||+||+|+++++|+...- +++.. + +
T Consensus 156 ~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c 235 (510)
T PF00955_consen 156 LLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSC 235 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999998863100 00000 0 0
Q ss_pred -ccccccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCcccCCCCccccCCCC
Q 007049 192 -YQPSWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPARSVPKGIPRRLFSPN 270 (620)
Q Consensus 192 -~~~~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~ 270 (620)
.+..+.++++++|++|++|||++|+++++||+|+||++++|+++||||+||||++|++++|+.+.++| ++.+|+
T Consensus 236 ~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~-----kL~vp~ 310 (510)
T PF00955_consen 236 DDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTP-----KLNVPS 310 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhccccc-----ccCCCC
Confidence 00123456789999999999999999999999999999999999999999999999999988764443 466777
Q ss_pred CCCCCCC--CCceEeccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhc
Q 007049 271 PWSPGAY--ENWTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGL 348 (620)
Q Consensus 271 ~~~p~~~--r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sl 348 (620)
.++|+.. |+|++ .+++++|+|++++|++||+++++|||||||||++|+|+||||||||+||||||+++|++|++||+
T Consensus 311 ~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sl 389 (510)
T PF00955_consen 311 SFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSL 389 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCeec-CcccCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHH
Confidence 7877654 99996 57889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhh
Q 007049 349 LGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKES 428 (620)
Q Consensus 349 lGLPw~~ga~pqSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 428 (620)
|||||+|||+||||+|++||+++++
T Consensus 390 lGLPw~~aa~~~S~~Hv~sL~~~~~------------------------------------------------------- 414 (510)
T PF00955_consen 390 LGLPWMNAATPQSPMHVRSLAVESE------------------------------------------------------- 414 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcccCccCCHHHhCcccEEec-------------------------------------------------------
Confidence 9999999999999999999987654
Q ss_pred hhccCCCCCCccccccccccccCcceeeeecchhhHHHHHHHHHHhhhcccCcccchhhhhHHHHhhcccCCcchHHHHH
Q 007049 429 RIQMDAPVDENAFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGCVAAMPLLKRIPTSVLWGYFAFMAIESLPGNQFWERI 508 (620)
Q Consensus 429 ~~~~~~p~~~~~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s~~~~pvL~~IP~aVL~GvFlyMG~sSL~gnq~~~Ri 508 (620)
.++|||++++ ++|+|||+||+++|+|||+|+++.|+|++||+|||+|+|+|||++||+||||+||+
T Consensus 415 ---~~~pGe~~~i-----------~~V~EqRvT~l~~~~Ligls~~l~pvL~~IP~~VL~GvFlymG~~sL~gnq~~~Ri 480 (510)
T PF00955_consen 415 ---TSAPGEKPKI-----------VGVREQRVTGLLVHLLIGLSLFLLPVLKLIPMPVLYGVFLYMGVTSLSGNQFFERI 480 (510)
T ss_dssp ----------------------------------------------------------------------------TTTT
T ss_pred ---cccCCCCCee-----------CeEEEecccHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhheeeeecCccHHHHH
Confidence 1356776643 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccccccCCccccccccCccchhhHHHH
Q 007049 509 LLIFTAPSRRYKVLENYHATFVETVPFKTILVFTIF 544 (620)
Q Consensus 509 ~llf~~~~~~~~~~~~p~~~yvr~Vp~~~ihlFT~i 544 (620)
++++||+|++ ||.+|+||||+||||+||+|
T Consensus 481 ~ll~~~~k~~------P~~~ylr~Vp~~~ihlfT~I 510 (510)
T PF00955_consen 481 LLLFMPPKHY------PDTHYLRRVPQRKIHLFTLI 510 (510)
T ss_dssp ------SS---------------TTHHHHHT-----
T ss_pred HHHccCcccc------cCCHHHCcCCCCeEEEEEeC
Confidence 9999999863 67899999999999999986
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.24 E-value=3.9e-10 Score=127.54 Aligned_cols=327 Identities=19% Similarity=0.218 Sum_probs=220.3
Q ss_pred hhhhh-HHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHH-HHHHHHhhccCCccccchhh
Q 007049 46 ASAIP-VISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMY-TFMFNFAKNRSDLGSKLFLA 123 (620)
Q Consensus 46 a~l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~-~~ly~~~~~~~~~~~~~fl~ 123 (620)
+.++| |++|+..-+ .+..-=|-++.++|++|++|+|-|-.|.|.||++.+.. .++.+.. .+ ++.
T Consensus 33 ~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~-~~-------g~~ 98 (554)
T COG0659 33 AVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLV-ET-------GLA 98 (554)
T ss_pred HHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHH-HH-------HHH
Confidence 34569 999998544 55666678999999999999999999999999976632 2233233 33 445
Q ss_pred HHHHHHHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCccccc--ccccchhH
Q 007049 124 WTGWVCMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQ--PSWRFANG 201 (620)
Q Consensus 124 ~~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~--~~~~~~~~ 201 (620)
..+-..+-++++++++..+-..++++|+.|--=--|-.=|+++-+..-++++... +...+....+.. .+.-....
T Consensus 99 ~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~---~~~~~~~~~~~~~l~~~~~~~~ 175 (554)
T COG0659 99 LAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGL---ASKVSGFWAKVSALFTVLLTIN 175 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCC---CccccchHHHHHHHHHhccccc
Confidence 5567889999999999999999999999886555666667777777777776542 111110000000 00000112
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCcccC-CC-CccccCCCCCCCCCCCCC
Q 007049 202 MFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPARSVP-KG-IPRRLFSPNPWSPGAYEN 279 (620)
Q Consensus 202 lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~vp-~~-~~~~l~~p~~~~p~~~r~ 279 (620)
..++++...++.+-+.+++.+ +..|+ ..+++++.+.+++.++.+.+ .+ ++..++.+ ...
T Consensus 176 ~~~~~lg~~~l~il~~~~~~~--~~~P~----------~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~-------~~~ 236 (554)
T COG0659 176 LATLLLGLLTLAILLFLPRLT--PRIPS----------PLIALVLGTLIVWIFPLDSLRYGEIPGSLPSG-------LPH 236 (554)
T ss_pred HHHHHHHHHHHHHHHHccchh--hhCCc----------HHHHHHHHHHHHHHhcCCchhcccCcccCCcC-------CCc
Confidence 445666666666666555444 33333 68899999999988876654 12 22212211 122
Q ss_pred ceEeccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCCCCC
Q 007049 280 WTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANGVIP 359 (620)
Q Consensus 280 W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~ga~p 359 (620)
|. ..+++...+..-+++|+.++++-+.|+=.|+....+..+. ..--+-+|.-.|+-|.++|+||==+.+|++.
T Consensus 237 ~~----~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~---~~d~nrELiaqGiaNi~sglfgg~p~~g~~s 309 (554)
T COG0659 237 FR----LPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT---KHDSNRELIAQGIANIASGLFGGIPATGSIS 309 (554)
T ss_pred cc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHHHhhHHHHHHHHhCCccccchhH
Confidence 22 2335544455666679999999999999999988765433 3334678999999999999999444567665
Q ss_pred CCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCCCCc
Q 007049 360 QSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPVDEN 439 (620)
Q Consensus 360 qSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~~~~ 439 (620)
||..-.+| ++
T Consensus 310 rS~~nv~s-------------------------------------------------------------------Ga--- 319 (554)
T COG0659 310 RSAINIKS-------------------------------------------------------------------GA--- 319 (554)
T ss_pred HHHHHHHh-------------------------------------------------------------------CC---
Confidence 54332221 10
Q ss_pred cccccccccccCcceeeeecchhhHHHHHHHHHHh-hhcccCcccchhhhhHHHHhhcccCCcc
Q 007049 440 AFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGCVA-AMPLLKRIPTSVLWGYFAFMAIESLPGN 502 (620)
Q Consensus 440 ~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s~~-~~pvL~~IP~aVL~GvFlyMG~sSL~gn 502 (620)
-+|+++++.++++.+.++ +.|++.+||+|+|.|+-++.|+.-+.--
T Consensus 320 -----------------rT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavli~v~~~l~~~~ 366 (554)
T COG0659 320 -----------------RTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVLILVGWGLLDWS 366 (554)
T ss_pred -----------------cChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhccHH
Confidence 368999999988877754 5789999999999999999998876653
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.15 E-value=1.7e-09 Score=122.53 Aligned_cols=338 Identities=14% Similarity=0.117 Sum_probs=206.6
Q ss_pred hhh-HHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHH-HHHHhhccCCccccchhhHH
Q 007049 48 AIP-VISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTF-MFNFAKNRSDLGSKLFLAWT 125 (620)
Q Consensus 48 l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~-ly~~~~~~~~~~~~~fl~~~ 125 (620)
..| +++|+.+-+ -.-.+| +.++.+.+++|++||+-|..+.|+|+.+.+.... +-++..... ...++....
T Consensus 28 ~iP~~~ayA~lag--lpp~~G----Lysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~--~~~~~~~~a 99 (563)
T TIGR00815 28 LIPQAMAYAILAG--LSPIYG----LYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYL--FDCDAIRLA 99 (563)
T ss_pred HHHHHHHHHHHcC--CCchhh----hHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCC--cccHHHHHH
Confidence 445 899987652 333444 7899999999999999999999999886654332 333433321 012577888
Q ss_pred HHHHHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCccccccccc--chh---
Q 007049 126 GWVCMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQPSWR--FAN--- 200 (620)
Q Consensus 126 ~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~~--~~~--- 200 (620)
.++.+-++++++++..+....+++|+.+--=.-|..=++++.+..-++++...-..+..++.. .+....+. ...
T Consensus 100 ~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 178 (563)
T TIGR00815 100 FTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTL-GVVISTWAGLPNTHNW 178 (563)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHHHHhhhcccc
Confidence 899999999999999999999999999877778888888888888888886531100111110 00000000 000
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCccccccccc--chhHHHHHHHHhhccccCcccCCCCccccCCCCCCCCCCCC
Q 007049 201 GMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIAD--YGVPLMVLVWTAVSYIPARSVPKGIPRRLFSPNPWSPGAYE 278 (620)
Q Consensus 201 ~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaD--fgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~r 278 (620)
-..++++.+.++.+-+..++.+ ++.|+.+.= -+..+++++.+.+.++...+- .++..--..|..+ |
T Consensus 179 ~~~~~~i~~~~~~~l~~~~~~~------~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~-~~~~~~g~ip~g~-p---- 246 (563)
T TIGR00815 179 NWCTLVIGLVLLLFLLYTKKLG------KRNKKLLFAPAVAPLLVVILATLAVTIGLHKK-QGVSILGHIPSGL-S---- 246 (563)
T ss_pred chHHHHHHHHHHHHHHHHHHhh------hhccchhcccccHHHHHHHHHHHHHHHHccCC-CCeEEEeecCCCC-C----
Confidence 1334455555544444443322 122222110 122334444444443331110 0000000111111 0
Q ss_pred CceEeccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCCCC
Q 007049 279 NWTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANGVI 358 (620)
Q Consensus 279 ~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~ga~ 358 (620)
.|. ...+++..+...++.|+.++++-|.|+-.++.-..++.+ +..-.+-++...|+.|+++|++|--+.++..
T Consensus 247 ~~~----~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~---~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~ 319 (563)
T TIGR00815 247 FFP----PITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTG---YKIDANQELVAQGIANIVGSFFSCYPATGSL 319 (563)
T ss_pred CCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCcHHHHHhhHHHHHHHHhCccCCCCcc
Confidence 010 111222334455666899999999999888876655432 3355678899999999999999988887776
Q ss_pred CCCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCCCC
Q 007049 359 PQSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPVDE 438 (620)
Q Consensus 359 pqSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~~~ 438 (620)
-||....++
T Consensus 320 srs~~~~~~----------------------------------------------------------------------- 328 (563)
T TIGR00815 320 SRTAVNAKA----------------------------------------------------------------------- 328 (563)
T ss_pred hHHHHHHhc-----------------------------------------------------------------------
Confidence 543222211
Q ss_pred ccccccccccccCcceeeeecchhhHHHHHHHHH-HhhhcccCcccchhhhhHHHHhhcccCCc
Q 007049 439 NAFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGC-VAAMPLLKRIPTSVLWGYFAFMAIESLPG 501 (620)
Q Consensus 439 ~~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s-~~~~pvL~~IP~aVL~GvFlyMG~sSL~g 501 (620)
+. -+|+++++.++++.+. +++.|++..||+++|.|+-++.|+. +..
T Consensus 329 ---------------G~-~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~-l~~ 375 (563)
T TIGR00815 329 ---------------GC-RTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRG-LID 375 (563)
T ss_pred ---------------CC-cchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhc-ccC
Confidence 00 2588999998887766 4568999999999999999999998 654
No 6
>PRK11660 putative transporter; Provisional
Probab=99.08 E-value=6.2e-09 Score=118.23 Aligned_cols=329 Identities=16% Similarity=0.161 Sum_probs=195.8
Q ss_pred hhh-HHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccccchhhHHH
Q 007049 48 AIP-VISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGSKLFLAWTG 126 (620)
Q Consensus 48 l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~~~fl~~~~ 126 (620)
..| ++||+.+-+ -.-.+| |.|+.+++++|++||+-|..+.|+|+.+.+. +....++.+ +..-.
T Consensus 43 ~iPq~mayA~lag--~pp~~G----Lysa~~~~~vyal~Gss~~~~~Gp~a~~~~~---~~~~~~~~~-------~~~~~ 106 (568)
T PRK11660 43 AIPLAMALAIASG--VPPQYG----LYTAAVAGIVIALTGGSRFSVSGPTAAFVVI---LYPVSQQFG-------LAGLL 106 (568)
T ss_pred HHHHHHHHHHHcC--CChHHH----HHHHHHHHHHHHHhcCCCCcccChhHHHHHH---HHHHHHHhh-------HHHHH
Confidence 455 888885422 222233 8899999999999999999999988887664 334444433 22234
Q ss_pred HHHHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCccc---ccccccchhHHH
Q 007049 127 WVCMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIE---YQPSWRFANGMF 203 (620)
Q Consensus 127 WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~---~~~~~~~~~~ll 203 (620)
...+.++++.+++..+...++++|+.+=-=.-|..=++++.+...++++... +.+....+..+. ...+.... -..
T Consensus 107 ~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~-~~~~~~~~~~~~l~~~~~~l~~~-~~~ 184 (568)
T PRK11660 107 VATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGL-QMAHVPEHYLEKVGALFQALPTI-NWG 184 (568)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCccHHHHHHHHHHhhccC-CHH
Confidence 6789999999999999999999999887777777777887777777776432 111000000000 00000000 123
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCcc---cC-----------CCCccccCCC
Q 007049 204 ALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPARS---VP-----------KGIPRRLFSP 269 (620)
Q Consensus 204 s~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~---vp-----------~~~~~~l~~p 269 (620)
++++++.++.+.+.+++++. ..| +..+++++.+.++|..... ++ ++... ...|
T Consensus 185 ~~~~~~~~l~lll~~~~~~~--~iP----------~~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~-~~ip 251 (568)
T PRK11660 185 DALIGIVTLGVLILWPRLKI--RLP----------GHLPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQG-NGIP 251 (568)
T ss_pred HHHHHHHHHHHHHHHHhhcc--cCc----------hHHHHHHHHHHHHHHHhccCCCceeecccccccccccccc-cCCC
Confidence 44444545444444443331 111 2245566666655443211 11 11000 0011
Q ss_pred CCCCCCCCCCceEe---ccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhh
Q 007049 270 NPWSPGAYENWTVI---KDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIIC 346 (620)
Q Consensus 270 ~~~~p~~~r~W~v~---~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~ 346 (620)
..+ |.-.-.|... .+..++++..+..-+..|+.++++-++|.-.++.-..++. +|..-.+-+|.-.|+.|.++
T Consensus 252 ~~~-p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~---~~~~d~n~EL~a~G~aNi~~ 327 (568)
T PRK11660 252 PLL-PQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMT---GTKHSANSELVGQGLGNIVA 327 (568)
T ss_pred CCC-CCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCcHHHHHHhHHHHHH
Confidence 110 0000001000 0122334333444455688888888888876665544432 23345789999999999999
Q ss_pred hccCCCCCCCCCCCCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhh
Q 007049 347 GLLGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELK 426 (620)
Q Consensus 347 sllGLPw~~ga~pqSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 426 (620)
|++|-.+.++...||-...+
T Consensus 328 ~~fgg~p~~~s~srSa~n~~------------------------------------------------------------ 347 (568)
T PRK11660 328 PFFGGITATAAIARSAANVR------------------------------------------------------------ 347 (568)
T ss_pred HHhCcccccchHHHHHHHHh------------------------------------------------------------
Confidence 99999988765544411110
Q ss_pred hhhhccCCCCCCccccccccccccCcceeeeecchhhHHHHHHHHHH-hhhcccCcccchhhhhHHHHhhccc
Q 007049 427 ESRIQMDAPVDENAFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGCV-AAMPLLKRIPTSVLWGYFAFMAIES 498 (620)
Q Consensus 427 ~~~~~~~~p~~~~~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s~-~~~pvL~~IP~aVL~GvFlyMG~sS 498 (620)
+++ -+|+++++.++++.+.+ ++.|++..||.+||.|+-+|.|+.-
T Consensus 348 -------aGa--------------------rT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m 393 (568)
T PRK11660 348 -------AGA--------------------TSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNM 393 (568)
T ss_pred -------cCC--------------------CcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 010 36899999999888875 6789999999999999999999863
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=98.12 E-value=0.00014 Score=79.55 Aligned_cols=266 Identities=16% Similarity=0.149 Sum_probs=139.7
Q ss_pred hHHHHhhhhhhHHHHhccccccc-CCcchhHHHHHhhhhhHHHHH----HhcCcceeeeeccchHHHHHHHHHHHhhccC
Q 007049 40 TTYIFFASAIPVISFGEQLDRET-DGTLTAVQTLASTALCGIIHS----IIGGQPLLILGVAEPTVIMYTFMFNFAKNRS 114 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~~~T-~~~igv~E~lls~ai~Giifs----lfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~ 114 (620)
.+++|-+++++.+-.+.-++-.. +-..-++-++++++++.++++ .+++.--.+.|++++... .++..+.+.+
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~---~~~~~~~~~~ 81 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVG---PMIAIGAGGG 81 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHH---HHHHHhhhhh
Confidence 45677787777666654311111 111234568889999999997 567777788888886555 3444444322
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcccccc
Q 007049 115 DLGSKLFLAWTGWVCMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQP 194 (620)
Q Consensus 115 ~~~~~~fl~~~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~ 194 (620)
++--.-..++++++.++++. =...+.|+++.-.--.+.++|++..+.-+++..... +. +.
T Consensus 82 -------~~~~~ga~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~~--~~------- 141 (406)
T TIGR03173 82 -------LGAIFGAVIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---AG--AP------- 141 (406)
T ss_pred -------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---CC--cc-------
Confidence 23334566777777777772 233445555543333444456666666666544211 00 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCc-ccCCCCccc--cCCCCC
Q 007049 195 SWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAR-SVPKGIPRR--LFSPNP 271 (620)
Q Consensus 195 ~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~-~vp~~~~~~--l~~p~~ 271 (620)
++.... +.++++.++.+.+.+++ +.|+++.-+++.+++++.+.+++..+. +.+. +.+. ...|.+
T Consensus 142 ~~~~~~---~~~l~l~~l~~~il~~~---------~~~~~~~~~aiLi~ivvg~iva~~~g~~~~~~-i~~~~~~~~P~~ 208 (406)
T TIGR03173 142 DFGSPQ---NLGLALLTLVIILLLNR---------FGKGFLRSIAVLLGLVVGTIVAAALGMVDFSG-VAEAPWFALPTP 208 (406)
T ss_pred cccchH---HHHHHHHHHHHHHHHHH---------HhhhHHHHhHHHHHHHHHHHHHHHhcCCCchh-hccCCeeeCCCC
Confidence 000001 12333333333332222 233456667999999998888765542 2111 1000 001111
Q ss_pred CCCCCCCCceEeccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCC
Q 007049 272 WSPGAYENWTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGI 351 (620)
Q Consensus 272 ~~p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGL 351 (620)
+ .| ..|.+ -+.++++.+.+++.-++|+-=+..-+.+..++-.+....+-.+..-|+-|.++|++|-
T Consensus 209 ~------~~-------~~P~f-~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~ 274 (406)
T TIGR03173 209 F------HF-------GAPTF-DLVAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNT 274 (406)
T ss_pred C------cC-------CCCee-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCC
Confidence 1 01 11111 1223344555666667776554444333322211234567789999999999999998
Q ss_pred CCCC
Q 007049 352 PPAN 355 (620)
Q Consensus 352 Pw~~ 355 (620)
++.+
T Consensus 275 ~p~t 278 (406)
T TIGR03173 275 FPYT 278 (406)
T ss_pred CCCc
Confidence 7753
No 8
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.11 E-value=1.8e-05 Score=81.42 Aligned_cols=123 Identities=25% Similarity=0.348 Sum_probs=93.6
Q ss_pred HHHhhhhHHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCCCCCCCccchhhhHHHHH
Q 007049 294 IIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANGVIPQSPMHTKSLATLKH 373 (620)
Q Consensus 294 i~~A~iPAlll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~ga~pqSp~H~~sL~~~~~ 373 (620)
+...+..|+.++++-++|+-.++....++. ++..-.+-+|.-+|+.|.++|++|--+.++..-||..+.++
T Consensus 146 ~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~---~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~~------ 216 (280)
T PF00916_consen 146 ILDLLPTALAIAIVGFIESLLIAKSIAKKT---GYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYRA------ 216 (280)
T ss_pred ccccchhHHHHHHHHHHHHHHhhhhhcccc---cccCCcHHHHHHhhhccccchhhcccccccccccchHHHhc------
Confidence 344556688899999999888777665533 45567889999999999999999877777776655443321
Q ss_pred hhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCCCCccccccccccccCcc
Q 007049 374 QLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPVDENAFDIEKEIDDLLPV 453 (620)
Q Consensus 374 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~~~~~~~~e~~i~~~~~v 453 (620)
T Consensus 217 -------------------------------------------------------------------------------- 216 (280)
T PF00916_consen 217 -------------------------------------------------------------------------------- 216 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeecchhhHHHHHHHHHH-hhhcccCcccchhhhhHHHHhhcccCCcchHHHH
Q 007049 454 EVKEQRLSNLLQSTMVGGCV-AAMPLLKRIPTSVLWGYFAFMAIESLPGNQFWER 507 (620)
Q Consensus 454 ~V~EQRvT~ll~~lLig~s~-~~~pvL~~IP~aVL~GvFlyMG~sSL~gnq~~~R 507 (620)
+. -+|+++++.++.+.+.+ +..|++..||+++|.|+-++.|++ |..-.-+++
T Consensus 217 Ga-~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~~-l~~~~~~~~ 269 (280)
T PF00916_consen 217 GA-RTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGIS-LIDWSSLRR 269 (280)
T ss_pred Cc-ceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHH
Confidence 11 37899999998887764 457899999999999999999999 665444444
No 9
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=98.11 E-value=0.0003 Score=77.49 Aligned_cols=266 Identities=14% Similarity=0.142 Sum_probs=151.2
Q ss_pred hHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcc---eeeeeccchHHHHHHHHHHHhhccCCc
Q 007049 40 TTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQP---LLILGVAEPTVIMYTFMFNFAKNRSDL 116 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQP---L~Ilg~TGP~lif~~~ly~~~~~~~~~ 116 (620)
.++||-++++|.+..|..+-+.-+-..=++-+++.++++-+++++..+.| .++.|++--. +-..+. .....+
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~--i~~~~~-~~~~~~-- 89 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAF--VSPMIA-IGSGLG-- 89 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHH--HHHHHH-HHhccC--
Confidence 56788888888888887763333333445678889999999999999999 6667765222 111111 111211
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHh---ccc-cchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcccc
Q 007049 117 GSKLFLAWTGWVCMWTALLLFLLAIL---GAC-SIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEY 192 (620)
Q Consensus 117 ~~~~fl~~~~WvgiW~~~~~~i~aa~---~~s-~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~ 192 (620)
. +--.=..++++++.++++.+ ..- .+.|+++.-.--...++|.+....-+++.+......|. +. +
T Consensus 90 --~---~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~--~~---~- 158 (415)
T TIGR00801 90 --I---PAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMS--SA---T- 158 (415)
T ss_pred --H---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccc--cc---c-
Confidence 1 11111345555555555553 111 23567777777778888888888888887743221110 00 0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCc-ccCCCCccccCCCCC
Q 007049 193 QPSWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAR-SVPKGIPRRLFSPNP 271 (620)
Q Consensus 193 ~~~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~-~vp~~~~~~l~~p~~ 271 (620)
+.. .-++.+++.++.+...+++ +.|+++.-+++.+++++.+.+++..+. +.++ +. ..+
T Consensus 159 ---~~~---~~~~~vg~~~l~~~vl~~~---------~~~g~~~~~aiLigiv~g~i~a~~lg~~~~~~-v~-----~~~ 217 (415)
T TIGR00801 159 ---YGS---LENLGVAFVVLALIILLNR---------FGKGFLKSISILIGILVGYILALFMGIVDFSP-VI-----DAP 217 (415)
T ss_pred ---cCc---hhhHHHHHHHHHHHHHHHH---------HHhhHHHHHHHHHHHHHHHHHHHHcCCccchh-hc-----cCc
Confidence 100 1134455555554433322 234456677999999998888866642 2111 10 111
Q ss_pred CCCCCCCCceEeccC----CCcchHHHHHhhhhHHhhhhheeecchhHHHHhhcccc-CCCCCCccchhHHHHHHHHHhh
Q 007049 272 WSPGAYENWTVIKDM----LNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEF-NLRKPSSFHYDLLLLGLMVIIC 346 (620)
Q Consensus 272 ~~p~~~r~W~v~~~~----~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~~e~-kLkKg~gyHlDl~llgi~t~v~ 346 (620)
|+-.+++ ++++ +.++++.+.+++.-++|+.=+..-+.+..+ +..|....+=+++.-|+-|.++
T Consensus 218 --------~~~lP~~~~~g~~f~----~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~a 285 (415)
T TIGR00801 218 --------WFSLPTPFTFGPSFE----WPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLA 285 (415)
T ss_pred --------ccccCCccCCCceec----HHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHH
Confidence 2111111 0122 234455566777888888655544343322 2222456778999999999999
Q ss_pred hccCCCCC
Q 007049 347 GLLGIPPA 354 (620)
Q Consensus 347 sllGLPw~ 354 (620)
|++|-.+.
T Consensus 286 glfG~~p~ 293 (415)
T TIGR00801 286 GLFGGFPN 293 (415)
T ss_pred HhcCCCCC
Confidence 99998765
No 10
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=97.85 E-value=0.0017 Score=75.71 Aligned_cols=334 Identities=17% Similarity=0.220 Sum_probs=181.9
Q ss_pred hhh-HHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHH-HHHHhhccCC-ccccchhhH
Q 007049 48 AIP-VISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTF-MFNFAKNRSD-LGSKLFLAW 124 (620)
Q Consensus 48 l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~-ly~~~~~~~~-~~~~~fl~~ 124 (620)
..| +|||+.+-+ +-..==|-|+.++.++|++|+-.+=.-+|+++=+.++... +-+.+.+.+. .....++..
T Consensus 94 ~VPQ~iaYa~la~------lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~v 167 (665)
T KOG0236|consen 94 SVPQGLAYALLAG------LPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQV 167 (665)
T ss_pred ecchHHHHHHHcC------CChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHH
Confidence 345 677777754 2233446689999999999999998888766655544332 2244443220 001356777
Q ss_pred HHHHHHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCccccc---ccccchhH
Q 007049 125 TGWVCMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQ---PSWRFANG 201 (620)
Q Consensus 125 ~~WvgiW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~---~~~~~~~~ 201 (620)
.+-+.+-++++-+++..+..-+++.|+.+=.=--|..=.|+.-+...+|.+...-..+.+.++....+. ........
T Consensus 168 a~~lt~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (665)
T KOG0236|consen 168 ATTLTFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT 247 (665)
T ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc
Confidence 788999999999999999999999999875444555555666666777777654322222222100000 00000000
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCccccccc--ccchhHHHHHHHHhhccccCcccCCCCcccc-CCCCCCCCCCCC
Q 007049 202 MFALVLSFGLLHTALRSRKARSWRYGSGCLRGFI--ADYGVPLMVLVWTAVSYIPARSVPKGIPRRL-FSPNPWSPGAYE 278 (620)
Q Consensus 202 lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~i--aDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l-~~p~~~~p~~~r 278 (620)
+.++++.+....+-+..|. +.++..+.+. .==.-.+.|++.|+++|....+-. ..+... ++|..+.|.+
T Consensus 248 ~~~~~~~l~~l~~L~~~k~-----~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~~~~-- 319 (665)
T KOG0236|consen 248 LATLVLSLIFLVVLLLTKE-----LNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFPPPS-- 319 (665)
T ss_pred chhhhhHHHHHHHHHHHHH-----hhhhhcccceeecccHHHHHHHHHHHHHHHhccccc-cCCeeeccCCCCCCCCC--
Confidence 1222222222211111111 1111111111 111225678888888887753211 111112 3343332211
Q ss_pred CceEeccCCCcchHHHHHhhhh-HHhhhhheeecc-hhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhccCCCCCCC
Q 007049 279 NWTVIKDMLNVPLLYIIGAFIP-ATMIAVLYYFDH-SVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLLGIPPANG 356 (620)
Q Consensus 279 ~W~v~~~~~~~p~~~i~~A~iP-Alll~iLiF~D~-nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sllGLPw~~g 356 (620)
+|.......+++ |+.+++.-+.++ +|....+.++.++.. =+-+|+-+|++|.++|+||.=+..|
T Consensus 320 ----------lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd----~nqELiAlG~~Ni~sSff~~~p~tg 385 (665)
T KOG0236|consen 320 ----------LPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKVD----SNQELIALGISNILSSFFGCYPTTG 385 (665)
T ss_pred ----------CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeC----CChHHHHHHHHHHhhhhhceEcccc
Confidence 111111113333 444445444444 334444433333332 3578999999999999999554433
Q ss_pred CCCCCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhhhccCCCC
Q 007049 357 VIPQSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESRIQMDAPV 436 (620)
Q Consensus 357 a~pqSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~p~ 436 (620)
+.-|| .. ++ .
T Consensus 386 s~sRS------av--------------------------------------------------~~-----------~--- 395 (665)
T KOG0236|consen 386 SFSRS------AV--------------------------------------------------NI-----------K--- 395 (665)
T ss_pred hhhHH------HH--------------------------------------------------Hh-----------h---
Confidence 33111 10 00 0
Q ss_pred CCccccccccccccCcceeeeecchhhHHHHHHHHHHh-hhcccCcccchhhhhHHHHhhc
Q 007049 437 DENAFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGCVA-AMPLLKRIPTSVLWGYFAFMAI 496 (620)
Q Consensus 437 ~~~~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s~~-~~pvL~~IP~aVL~GvFlyMG~ 496 (620)
.=..|+++|++.++++.+.+. ++|.+..||++||..+-..-+.
T Consensus 396 -----------------sG~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~ 439 (665)
T KOG0236|consen 396 -----------------SGGRTQVAGIVSAALVLLALLFLGPLFYYIPKCVLAAIIISALI 439 (665)
T ss_pred -----------------cCCcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Confidence 112578999999999988864 6899999999999998875443
No 11
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=97.57 E-value=0.011 Score=65.98 Aligned_cols=271 Identities=14% Similarity=0.116 Sum_probs=149.4
Q ss_pred hHHHHhhhhhhHHHHhcccccccCC-cchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccc
Q 007049 40 TTYIFFASAIPVISFGEQLDRETDG-TLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGS 118 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~~~T~~-~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~ 118 (620)
.++||-.+++|.+..+..++-..+. ..=++-+++.++++-++.+.++..=.++.|+|+..+ ..+..+|......|
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~---~~~~~i~~~~~~~g- 93 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWW---GTILTITLGEASRG- 93 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHH---HHHHHHHhcccccC-
Confidence 5678888899988888765532222 233556788999999999999888777888877543 23444553221111
Q ss_pred cch-hhHH--HHHHHHHHHHHHHHHHhc-cccchhccccchhhHHHHHHHHHHHHHHHHHHhhh-cccCCCCCCCccccc
Q 007049 119 KLF-LAWT--GWVCMWTALLLFLLAILG-ACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDE-FRVPERENPKLIEYQ 193 (620)
Q Consensus 119 ~~f-l~~~--~WvgiW~~~~~~i~aa~~-~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~-f~~~~~~~~~~~~~~ 193 (620)
.++ -.+. .+--+=++++.++++.++ ...+.|++|--.--..=++|.+-.+--+++.+... +. .+ +++
T Consensus 94 ~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~----~~---~~~- 165 (433)
T PRK11412 94 TPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFG----IA---DPN- 165 (433)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCcc----Cc---ccc-
Confidence 011 1111 233455566666666666 34455666666666667777888888888776532 11 00 000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhc-cccCcccCCCCccccCCCCCC
Q 007049 194 PSWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVS-YIPARSVPKGIPRRLFSPNPW 272 (620)
Q Consensus 194 ~~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~-y~~~~~vp~~~~~~l~~p~~~ 272 (620)
.++. +....+++.|+.+.+.+. .+-|.+++-|++.+++++-..+. ...+.+..
T Consensus 166 ~~~~----~~~~~~a~~~l~~il~~~---------~~~~g~~~~~svLiGiv~G~v~a~~~~g~d~~------------- 219 (433)
T PRK11412 166 GKIQ----LPPFGLSVAVMCLVLAMI---------IFLPQRIARYSLLVGTIVGWILWAFCFPSSHS------------- 219 (433)
T ss_pred cccc----hHHHHHHHHHHHHHHHHH---------HHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc-------------
Confidence 0111 122344444444433332 12366888899999998877653 22221110
Q ss_pred CCCCCCCceEeccCCCcchHHHHHhhhhHHhhhhheee----cchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhc
Q 007049 273 SPGAYENWTVIKDMLNVPLLYIIGAFIPATMIAVLYYF----DHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGL 348 (620)
Q Consensus 273 ~p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~----D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sl 348 (620)
+...-.|... ++ ..|...-..++++.+++++.-.. |+..++.+.+++ ..|...++=-+..=|+-+.++|+
T Consensus 220 -~v~~a~w~~~-pf-G~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~---~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 220 -LSGELHWQWF-PL-GSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQ---GAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred -hhccCCceee-cC-CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCcccccchhhccHHHHHHHh
Confidence 0011124321 22 23210112334444444444333 566666676554 22234555567777999999999
Q ss_pred cCCCCC
Q 007049 349 LGIPPA 354 (620)
Q Consensus 349 lGLPw~ 354 (620)
+|-++.
T Consensus 294 fg~~p~ 299 (433)
T PRK11412 294 LAVIPF 299 (433)
T ss_pred cCCCCC
Confidence 998874
No 12
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=97.51 E-value=0.014 Score=64.96 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=67.2
Q ss_pred hhHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHHHHHHh--cCcceeeeeccchHHHHHHHHHHHhhccCCc
Q 007049 39 PTTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGIIHSII--GGQPLLILGVAEPTVIMYTFMFNFAKNRSDL 116 (620)
Q Consensus 39 s~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~Giifslf--sGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~ 116 (620)
-.+.||-.+++|.+-.| ++..++++.++++-+++++. ++-|+.. |+++ .|-..+-..+...+ .
T Consensus 39 h~lam~~~~v~~Plilg----------l~~~~tl~~sGi~TllQ~~~~G~rlP~v~-G~sf---~f~~~~~~~~~~~~-~ 103 (429)
T TIGR03616 39 HAVAMFGATVLMPLLMG----------FDPNLTILMSGIGTLLFFLITGGRVPSYL-GSSA---AFVGAVIAATGYNG-Q 103 (429)
T ss_pred HHHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHhCCCceeEE-cCcH---HHHHHHHHHHhhcc-c
Confidence 46677777777766655 22236899999999999865 6667644 5554 33333332221110 0
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHhccc----cchhccccchhhHHHHHHHHHHHHHHHHH
Q 007049 117 GSKLFLAWTGWVCMWTALLLFLLAILGAC----SIINRFTRIAGELFGLLIAMLFMQEAIKG 174 (620)
Q Consensus 117 ~~~~fl~~~~WvgiW~~~~~~i~aa~~~s----~lv~~~TRFTeEiF~~lIs~iFi~eai~~ 174 (620)
+..++++-..-..+-++++.++++.+... .+.|+++--.--...++|.+--+.-+++.
T Consensus 104 ~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~ 165 (429)
T TIGR03616 104 GTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKS 165 (429)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 11245665556667777777777776432 23344443333334445555445555543
No 13
>PRK10720 uracil transporter; Provisional
Probab=97.25 E-value=0.033 Score=61.88 Aligned_cols=253 Identities=17% Similarity=0.177 Sum_probs=124.6
Q ss_pred hHHHHhhhhhhHHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcC-cceeeeeccchHHHHHHHHHHHhhccCCccc
Q 007049 40 TTYIFFASAIPVISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGG-QPLLILGVAEPTVIMYTFMFNFAKNRSDLGS 118 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsG-QPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~ 118 (620)
.+.||-++++|.+-+| ++..+.++.++++-++++.+.| .=-++.|++ -.|...+-.... .+
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~s---fa~i~~~~~~~~-~~---- 85 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGSS---FAFISPVLLLLP-LG---- 85 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeCc---HHHHHHHHHHHH-cc----
Confidence 5678889999888774 3345689999999999998775 323345543 333323322332 12
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhc----cccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcccccc
Q 007049 119 KLFLAWTGWVCMWTALLLFLLAILG----ACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQP 194 (620)
Q Consensus 119 ~~fl~~~~WvgiW~~~~~~i~aa~~----~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~ 194 (620)
++.. .=.-++++++.++++.+- ...+.|+++.-.--.|-++|.+--.--+++.. . ..+ ++. +.
T Consensus 86 ~~~~---lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g--~~~--~~~--~~--- 152 (428)
T PRK10720 86 YEVA---LGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-G--LLP--AEG--QT--- 152 (428)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-c--ccC--CCC--cc---
Confidence 1222 124466777777777752 22345666654444444444443333333211 0 000 000 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCc-ccCCCCccccCCCCCCC
Q 007049 195 SWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAR-SVPKGIPRRLFSPNPWS 273 (620)
Q Consensus 195 ~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~-~vp~~~~~~l~~p~~~~ 273 (620)
.+ ...+.+++.++.+.+... ...|+++.-+++.+++++.+.+++..+. +.+ .+. ..+|.
T Consensus 153 -~~----~~~~~lalv~l~iil~~~---------~~~kg~~~~~~iLigIvvG~ila~~lG~~d~~-~v~-----~a~~~ 212 (428)
T PRK10720 153 -PD----SKTIIISMVTLAVTVLGS---------VLFRGFLAIIPILIGVLVGYALSFAMGMVDTT-PII-----EAHWF 212 (428)
T ss_pred -cc----hHHHHHHHHHHHHHHHHH---------HHhccHHHHhHHHHHHHHHHHHHHHhcCCCHH-Hhh-----cCccc
Confidence 01 112344444544443321 1123345556688999998888766642 111 010 01110
Q ss_pred CCCCCCceEeccCCCcchHHHHHhhhhHHhhhhheeecchhHHHHhhc--cccCCCCCCccchhHHHHHHHHHhhhccCC
Q 007049 274 PGAYENWTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQ--KEFNLRKPSSFHYDLLLLGLMVIICGLLGI 351 (620)
Q Consensus 274 p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~nIts~ivn~--~e~kLkKg~gyHlDl~llgi~t~v~sllGL 351 (620)
. ...|. .+ ++.+.. +.++.|..++. ++|+ +....+.. -+.+..|....+=+++.-|+-|.++|++|-
T Consensus 213 ~--lP~~~--~P--~fd~~~-il~l~~~~lv~---~~Es-iG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~ 281 (428)
T PRK10720 213 A--LPTFY--TP--RFEWFA-ILTILPAALVV---IAEH-VGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS 281 (428)
T ss_pred c--CCCCC--CC--cCcHHH-HHHHHHHHHHH---HHHH-HHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC
Confidence 0 00011 01 122222 23444444433 3454 33222211 112322345678899999999999999998
Q ss_pred CCC
Q 007049 352 PPA 354 (620)
Q Consensus 352 Pw~ 354 (620)
++.
T Consensus 282 ~p~ 284 (428)
T PRK10720 282 TPN 284 (428)
T ss_pred CCc
Confidence 864
No 14
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=97.17 E-value=0.0091 Score=65.19 Aligned_cols=271 Identities=17% Similarity=0.238 Sum_probs=128.5
Q ss_pred hHHHHhhhhhhHHHHhcccc--cccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHHHHHHhhccCCcc
Q 007049 40 TTYIFFASAIPVISFGEQLD--RETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLG 117 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~--~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~ 117 (620)
++.++-..+.+.+-.+..++ +.+. .=++-++++++++-+++++..|-|+.++=..+-..+. .+..........
T Consensus 11 ~l~m~~~~iv~P~il~~~~g~~~~~~--~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~---~~~~~~g~~~~~ 85 (389)
T PF00860_consen 11 FLAMFYIIIVVPLILAAAFGLDADTA--ALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF---AFMIVIGMAESG 85 (389)
T ss_dssp HHHHHHHHHHHHHTTTS-------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH---HHHGGG-----H
T ss_pred HHHHHHHHHHhHHHHhhcccccchhh--HHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh---hhhcccccccch
Confidence 44455555555444444433 3333 3356788999999999999888888776544433333 222222210000
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhccc-cchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCcccccccc
Q 007049 118 SKLFLAWTGWVCMWTALLLFLLAILGAC-SIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQPSW 196 (620)
Q Consensus 118 ~~~fl~~~~WvgiW~~~~~~i~aa~~~s-~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~ 196 (620)
...+ +--.=..+..+++.++++.++.- .+.|+++.-.-....++|.+-...-+++.+...-..+ +. ..+ .
T Consensus 86 ~~~~-~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~---~~--~~~---~ 156 (389)
T PF00860_consen 86 GYGL-QAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP---DG--LLV---G 156 (389)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B---TT---B-----
T ss_pred hhch-hhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc---cc--ccc---c
Confidence 0011 22223557888888888888885 6677788777778888888888888988775432110 11 000 0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccC-cccCCCCccccCCCCCCCCC
Q 007049 197 RFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPA-RSVPKGIPRRLFSPNPWSPG 275 (620)
Q Consensus 197 ~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~-~~vp~~~~~~l~~p~~~~p~ 275 (620)
. .-...+++.++...+.+... .|....-+++.+++++.+.+++..+ .+.+..+. ..|
T Consensus 157 ~----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ailigi~~g~i~~~~~g~~~~~~~~~-----~~~---- 214 (389)
T PF00860_consen 157 D----GKNLGLAVLTLLFILLLSLF---------LKGFLRKGAILIGIIAGWIVAAILGVVDFSPSVS-----SAP---- 214 (389)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHS---------SSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-HH-----HS-----
T ss_pred c----ccccccccccchhhhhhhhh---------hhhhcccccchhhhhhhhhhhhcccccccCcccc-----ccc----
Confidence 0 11122223333333322222 4555667899999998888775554 11111010 011
Q ss_pred CCCCceEeccC--CCcchHHHHHhhhhHHhhhhheeecc----hhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhcc
Q 007049 276 AYENWTVIKDM--LNVPLLYIIGAFIPATMIAVLYYFDH----SVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLL 349 (620)
Q Consensus 276 ~~r~W~v~~~~--~~~p~~~i~~A~iPAlll~iLiF~D~----nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sll 349 (620)
|+-.+.. +..|. .-..++++.+.+++.-++|+ .-.+.+.+++..+ ....+--+..-|+-+.++|++
T Consensus 215 ----~~~~p~~~~~g~p~-f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~---~~~~~r~l~~dg~~~~l~gl~ 286 (389)
T PF00860_consen 215 ----WFSLPSPFPFGWPS-FDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPR---PPRIRRGLLADGLGTILAGLF 286 (389)
T ss_dssp ----SS---------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC---CCCHHHHHHHHHHHHHHHHHH
T ss_pred ----cccccccccccccc-ccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc---chhhcccceeeeeeeeechhh
Confidence 2211100 11121 11223333344444444443 3333344443333 566777888899999999999
Q ss_pred CCCCC
Q 007049 350 GIPPA 354 (620)
Q Consensus 350 GLPw~ 354 (620)
|-.+.
T Consensus 287 G~~~~ 291 (389)
T PF00860_consen 287 GTSPT 291 (389)
T ss_dssp T---E
T ss_pred cCCCC
Confidence 98763
No 15
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=96.04 E-value=0.35 Score=54.22 Aligned_cols=338 Identities=17% Similarity=0.160 Sum_probs=191.3
Q ss_pred hHHHHhhhhhhHHHHhccccccc-CCcchhHHHHHhhhhhHHHHHHhcC----cceeeeeccchHHHHHHHHHHHhhccC
Q 007049 40 TTYIFFASAIPVISFGEQLDRET-DGTLTAVQTLASTALCGIIHSIIGG----QPLLILGVAEPTVIMYTFMFNFAKNRS 114 (620)
Q Consensus 40 ~iflyFa~l~PaIaFG~ll~~~T-~~~igv~E~lls~ai~GiifslfsG----QPL~Ilg~TGP~lif~~~ly~~~~~~~ 114 (620)
.+.||-+.+++.+.-|..++-.. +-.+=++-.++.++++-+++++-.+ |=..++|++-- |...+-...+..+
T Consensus 26 ~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFa---fi~p~i~~~~~~g 102 (451)
T COG2233 26 LLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFA---FVAPMIAIGGTTG 102 (451)
T ss_pred HHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHH---HHHHHHHHHhccC
Confidence 67899999999998887765332 2223355668899999999998444 66677887642 2223333334322
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHHhccc-cchhccccchhhHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCccccc
Q 007049 115 DLGSKLFLAWTGWVCMWTALLLFLLAILGAC-SIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFRVPERENPKLIEYQ 193 (620)
Q Consensus 115 ~~~~~~fl~~~~WvgiW~~~~~~i~aa~~~s-~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~ 193 (620)
. = .-....|+-.+.++.++.+.=.+ .+.|.+|-----..-++|.+-.+.-|++.+..... ...+.+.+
T Consensus 103 ~-----~-~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~----~~~~~~~~- 171 (451)
T COG2233 103 D-----G-IAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPG----AAGNPDFG- 171 (451)
T ss_pred C-----c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCC----CCCCcccC-
Confidence 0 0 11123455555555555544444 66666665555566667777777777776654321 00111111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhccccccccCcccccccccchhHHHHHHHHhhccccCcccCCCCccccCCCCCCC
Q 007049 194 PSWRFANGMFALVLSFGLLHTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPARSVPKGIPRRLFSPNPWS 273 (620)
Q Consensus 194 ~~~~~~~~lls~iL~~gt~~~a~~l~~fr~s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~ 273 (620)
..-.+.+++.|+.+.+... +|+ |.+++-+++.+++++-..++++.+ .+. ++
T Consensus 172 -------~~~~l~la~~tl~~il~~~-----~f~----~g~~~~i~ILiGlv~G~~la~~~G-~vd------------f~ 222 (451)
T COG2233 172 -------SLENLGLALVTLLIILLIN-----RFG----KGFLRRIPILIGLVVGYLLALFMG-MVD------------FS 222 (451)
T ss_pred -------chhHHHHHHHHHHHHHHHH-----HHh----hhHHHHHHHHHHHHHHHHHHHHhC-CcC------------cc
Confidence 1234566666666555442 343 444555688888888888877665 111 11
Q ss_pred CCCCCCceEeccCCCcchHHHHHhhhhHHhhhhheeecc----hhHHHHhhccccCCCCCCccchhHHHHHHHHHhhhcc
Q 007049 274 PGAYENWTVIKDMLNVPLLYIIGAFIPATMIAVLYYFDH----SVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICGLL 349 (620)
Q Consensus 274 p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiF~D~----nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~sll 349 (620)
+-....|+-.+.....-...-+.|+++.+.+++.-..|| -.++.+.+| ++.|-.++|=-++-=|+.+.+.|+|
T Consensus 223 ~v~~a~w~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~---~~~~~~~l~rg~~aDGlat~iag~f 299 (451)
T COG2233 223 GVAEAPWFALPTPFYFGMAFDWGAILTMLPVAIVTIVEHTGDITATGEITGR---DLDGKPRLRRGLLADGLATLIAGLF 299 (451)
T ss_pred ccccCceeeCCcccCCCeeecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCC---cCccCcccccceeeccHHHHHHHhc
Confidence 112233554332221100112345555555555555554 344555544 3444556666677779999999999
Q ss_pred CCCCCCCCCCCCccchhhhHHHHHhhhhhhhhhhhhhccccccccccccchhhHHHhhhcCcchhhchhhhhhhhhhhhh
Q 007049 350 GIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETAHKCISNNASLGQVYGSMQEAYQQMQSPLIYQESSAQGLKELKESR 429 (620)
Q Consensus 350 GLPw~~ga~pqSp~H~~sL~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 429 (620)
|=|+. +.+.+ |+.
T Consensus 300 g~~p~--------------Ttfaq-----------------NiG------------------------------------ 312 (451)
T COG2233 300 GGFPN--------------TTFAQ-----------------NIG------------------------------------ 312 (451)
T ss_pred CCCCC--------------Cchhh-----------------cee------------------------------------
Confidence 99974 11211 000
Q ss_pred hccCCCCCCccccccccccccCcceeeeecchhhHHHHHHHHHHh--hhcccCcccchhhhhHHHHh-hcccCCcchHHH
Q 007049 430 IQMDAPVDENAFDIEKEIDDLLPVEVKEQRLSNLLQSTMVGGCVA--AMPLLKRIPTSVLWGYFAFM-AIESLPGNQFWE 506 (620)
Q Consensus 430 ~~~~~p~~~~~~~~e~~i~~~~~v~V~EQRvT~ll~~lLig~s~~--~~pvL~~IP~aVL~GvFlyM-G~sSL~gnq~~~ 506 (620)
-++ ..+|+-.++.....-+++.++++ +.-++..||.||+-|+=+.| |.-+-.|.+++.
T Consensus 313 ----------------vv~---lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia~sGir~l~ 373 (451)
T COG2233 313 ----------------VVA---LTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIAASGIRILI 373 (451)
T ss_pred ----------------eee---eccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 000 03555556666655566655553 33479999999999985544 666667777776
Q ss_pred HHH
Q 007049 507 RIL 509 (620)
Q Consensus 507 Ri~ 509 (620)
|..
T Consensus 374 ~~~ 376 (451)
T COG2233 374 RNK 376 (451)
T ss_pred hcc
Confidence 654
No 16
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=47.66 E-value=4e+02 Score=30.86 Aligned_cols=54 Identities=17% Similarity=0.250 Sum_probs=42.2
Q ss_pred ceeeeecchhhHHHHHHHHHHh--hhcccCcccchhhhhHHHHh----hcccCCcchHHH
Q 007049 453 VEVKEQRLSNLLQSTMVGGCVA--AMPLLKRIPTSVLWGYFAFM----AIESLPGNQFWE 506 (620)
Q Consensus 453 v~V~EQRvT~ll~~lLig~s~~--~~pvL~~IP~aVL~GvFlyM----G~sSL~gnq~~~ 506 (620)
.+|---|+-.+....||..+++ ..-++..||.|+..|++..+ +--+|+.-|+.|
T Consensus 343 TKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf~d 402 (510)
T KOG1292|consen 343 TKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQFVD 402 (510)
T ss_pred eeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhheeec
Confidence 4777788888888899998987 35689999999999997654 556666666653
No 17
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=45.67 E-value=13 Score=32.60 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=38.4
Q ss_pred hhh-HHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHH
Q 007049 48 AIP-VISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIM 102 (620)
Q Consensus 48 l~P-aIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif 102 (620)
..| +++|+.+-+ ..-..| +.++.+++++|++|++-|-.++|+|+-+.+.
T Consensus 30 ~iPq~~a~A~lAg--~pp~~G----Ly~a~~~~liyalfG~s~~~~~Gp~a~~s~l 79 (84)
T PF13792_consen 30 AIPQGMAYALLAG--VPPIYG----LYAAIIPPLIYALFGSSRHMIVGPTAAMSLL 79 (84)
T ss_pred HHHHHHHHHHHcC--CCCCee----eHHHHHHHHHHhhccCCCccccChHHHHHHH
Confidence 467 899986544 223333 6788999999999999999999999887664
No 18
>PF12075 KN_motif: KN motif; InterPro: IPR021939 This small motif is found at the N terminus of Kank proteins and has been called the KN (for Kank N-terminal) motif. This protein is found in eukaryotes. Proteins in this family are typically between 413 to 1202 amino acids in length. This protein is found associated with PF00023 from PFAM. This protein has two conserved sequence motifs: TPYG and LDLDF. Kank1 was obtained by positional cloning of a tumor suppressor gene in renal cell carcinoma, while the other members were found by homology search. The family is involved in the regulation of actin polymerisation and cell motility through signaling pathways containing PI3K/Akt and/or unidentified modulators/effectors [].
Probab=30.95 E-value=20 Score=27.31 Aligned_cols=15 Identities=27% Similarity=0.627 Sum_probs=11.2
Q ss_pred CCCCCCccchhHHHH
Q 007049 325 NLRKPSSFHYDLLLL 339 (620)
Q Consensus 325 kLkKg~gyHlDl~ll 339 (620)
.++-|-||||||=-+
T Consensus 3 sv~tPYGyhiDLDFv 17 (39)
T PF12075_consen 3 SVETPYGYHIDLDFV 17 (39)
T ss_pred cccCCcceeecchHH
Confidence 355689999997555
No 19
>PF02109 DAD: DAD family; InterPro: IPR003038 Members of this family are thought to be integral membrane proteins. Some members of this family have been shown to cause apoptosis if mutated [], these proteins are known as DAD for defender against death. The family also includes the epsilon subunit of the oligosaccharyltransferase that is involved in N-linked glycosylation [].; GO: 0016021 integral to membrane
Probab=21.80 E-value=2.8e+02 Score=25.86 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccc----ccccCcccccccccchhHHHHHHHHhhcc
Q 007049 199 ANGMFALVLSFGLLHTALRSRKARS----WRYGSGCLRGFIADYGVPLMVLVWTAVSY 252 (620)
Q Consensus 199 ~~~lls~iL~~gt~~~a~~l~~fr~----s~f~~~~vR~~iaDfgv~iaI~~~~~~~y 252 (620)
+.-+-+.+.+.|++.++..||.--+ +.|..-+--|..+||-..--|+-+..+.|
T Consensus 53 NaFLsGf~s~VG~fVL~vsLR~Q~~p~n~~~f~~is~eRafaDfv~~slvLh~~v~nF 110 (112)
T PF02109_consen 53 NAFLSGFISCVGQFVLTVSLRIQLNPENKSEFPGISPERAFADFVFCSLVLHFVVFNF 110 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCChhhhhHHHHHHHHHHHHheeec
Confidence 4456678889999999888885433 45655556778899986655555554444
No 20
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=21.62 E-value=8.3e+02 Score=28.50 Aligned_cols=86 Identities=19% Similarity=0.317 Sum_probs=53.4
Q ss_pred ccccCcccccccccchhHHHHHHHHhhccccCc---ccCCCCccccCCCCCCCCCCCCCceEeccCCCcchHHHHHhhhh
Q 007049 224 WRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAR---SVPKGIPRRLFSPNPWSPGAYENWTVIKDMLNVPLLYIIGAFIP 300 (620)
Q Consensus 224 s~f~~~~vR~~iaDfgv~iaI~~~~~~~y~~~~---~vp~~~~~~l~~p~~~~p~~~r~W~v~~~~~~~p~~~i~~A~iP 300 (620)
|.|.|+..|.. .+.|+++..-+|+.+. +|.+|- .| .| -.| .++.++-+-
T Consensus 442 s~~wp~q~r~y------f~~iLif~~~SfWIPQIv~Nvvrg~-SR----~P------l~w-----------~yIlG~Tv~ 493 (636)
T KOG0828|consen 442 SAFWPVQFRNY------FIPILIFMYYSFWIPQIVANVVRGD-SR----KP------LHW-----------YYILGMTVT 493 (636)
T ss_pred ccccHHHHHHH------HHHHHHHHHHhhhHHHHHHHHhcCC-CC----CC------cch-----------hhhhhHhHH
Confidence 56677777765 7888898888888763 222231 11 11 123 235555555
Q ss_pred HHhhhhheeecchhHHHHhhccccCCCCCCccchhHHHHHHHHHhhh
Q 007049 301 ATMIAVLYYFDHSVASQLAQQKEFNLRKPSSFHYDLLLLGLMVIICG 347 (620)
Q Consensus 301 Alll~iLiF~D~nIts~ivn~~e~kLkKg~gyHlDl~llgi~t~v~s 347 (620)
-+.+-+-+|-+ +||=+|-.+-|||-+.++.-|..=.+
T Consensus 494 Rl~~plyVF~~----------s~n~~r~~p~~~f~v~L~lwmlFQv~ 530 (636)
T KOG0828|consen 494 RLAIPLYVFGC----------SENFMRVEPKYFFAVGLVLWMLFQVL 530 (636)
T ss_pred hhhcceEEEec----------chhhhccCCchhhHHHHHHHHHHHHH
Confidence 55555555655 46778889999998888776655333
No 21
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=20.92 E-value=1.3e+02 Score=21.69 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccc
Q 007049 122 LAWTGWVCMWTALLLFLLAILGAC 145 (620)
Q Consensus 122 l~~~~WvgiW~~~~~~i~aa~~~s 145 (620)
..+.-|+|+++++++++++++++-
T Consensus 6 ~~~H~~~g~~~~~~ll~~~lTG~~ 29 (34)
T PF13172_consen 6 RKIHRWLGLIAAIFLLLLALTGAL 29 (34)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456679999999999999998863
No 22
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=20.77 E-value=3e+02 Score=30.95 Aligned_cols=114 Identities=13% Similarity=0.190 Sum_probs=80.8
Q ss_pred hhHHHHhcccccccCCcchhHHHHHhhhhhHHHHHHhcCcceeeeeccchHHHHHHHHHHHhhccCCccccchhhHHHHH
Q 007049 49 IPVISFGEQLDRETDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKNRSDLGSKLFLAWTGWV 128 (620)
Q Consensus 49 ~PaIaFG~ll~~~T~~~igv~E~lls~ai~GiifslfsGQPL~Ilg~TGP~lif~~~ly~~~~~~~~~~~~~fl~~~~Wv 128 (620)
+|.++=-...+++. -+.+.+.+++++.++-+.|+|-+.++=+.|. .+|.+.+ ++.| ..-|.|-
T Consensus 241 lpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~~nlaaita----------Aic~G~~--ah~d-~~rR~~a 303 (395)
T TIGR00843 241 APGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGISIGIAAITA----------AICMGKD--AHED-KDKRWIA 303 (395)
T ss_pred chHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCchhhhhHHhH----------HHhcCcc--cccC-cCccchH
Confidence 44555444445544 4899999999999999999999988766433 3455543 2233 5677789
Q ss_pred HHHHHHHHHHHHHhccccchhccccchhhHHHHHHHHHHHHHHHHHHhhhcc
Q 007049 129 CMWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQEAIKGIVDEFR 180 (620)
Q Consensus 129 giW~~~~~~i~aa~~~s~lv~~~TRFTeEiF~~lIs~iFi~eai~~l~~~f~ 180 (620)
+++++++.+++..+.+ .++.-+.-+..|+-+.+-.+..+--=...+..-+.
T Consensus 304 ~i~~Gv~yll~glfag-~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~ 354 (395)
T TIGR00843 304 AAAAGIFYLLAGLFAG-AITALFAALPKELIAALAGLALLGAIAGNIKIALH 354 (395)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999977 66777888888888887776654433344444444
Done!