AmiGO: BLAST Results


BLAST match view associations BLAST with AtCDC48B AtCDC48B AtCDC48B AT3G53230	protein from Arabidopsis thaliana	1.4e-282
BLAST match view associations BLAST with AtCDC48C AtCDC48C AtCDC48C cell division cycle 48C	protein from Arabidopsis thaliana	1.1e-280
BLAST match view associations BLAST with CDC48 CDC48 CDC48 cell division cycle 48	protein from Arabidopsis thaliana	9.0e-279
BLAST match view associations BLAST with cdcD cdcD cdcD CDC48 family AAA ATPase	gene from Dictyostelium discoideum	4.7e-240
BLAST match view associations BLAST with vcp vcp vcp valosin containing protein	gene_product from Danio rerio	8.1e-236
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Homo sapiens	1.0e-235
BLAST match view associations BLAST with Vcp Vcp Vcp valosin containing protein	protein from Mus musculus	1.0e-235
BLAST match view associations BLAST with Vcp Vcp Vcp valosin-containing protein	gene from Rattus norvegicus	1.0e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Bos taurus	3.5e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Bos taurus	3.5e-235
BLAST match view associations BLAST with VCP VCP VCP Uncharacterized protein	protein from Canis lupus familiaris	3.5e-235
BLAST match view associations BLAST with LOC426240 LOC426240 LOC426240 Uncharacterized protein	protein from Gallus gallus	4.4e-235
BLAST match view associations BLAST with LOC426240 LOC426240 LOC426240 Uncharacterized protein	protein from Gallus gallus	4.4e-235
BLAST match view associations BLAST with vcp vcp vcp Transitional endoplasmic reticulum ATPase	protein from Xenopus (Silurana) tropicalis	7.2e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Sus scrofa	7.2e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Sus scrofa	5.1e-234
BLAST match view associations BLAST with vcp vcp vcp Transitional endoplasmic reticulum ATPase	protein from Xenopus laevis	6.5e-234
BLAST match view associations BLAST with zgc:136908 zgc:136908 zgc:136908	gene_product from Danio rerio	3.5e-224
BLAST match view associations BLAST with TER94 TER94 TER94	protein from Drosophila melanogaster	5.3e-219
BLAST match view associations BLAST with cdc-48.2 cdc-48.2 cdc-48.2	gene from Caenorhabditis elegans	1.0e-215
BLAST match view associations BLAST with cdc-48.2 cdc-48.2 cdc-48.2 Transitional endoplasmic reticulum ATPase homolog 2	protein from Caenorhabditis elegans	1.0e-215
BLAST match view associations BLAST with cdc-48.1 cdc-48.1 cdc-48.1	gene from Caenorhabditis elegans	8.4e-210
BLAST match view associations BLAST with cdc-48.1 cdc-48.1 cdc-48.1 Transitional endoplasmic reticulum ATPase homolog 1	protein from Caenorhabditis elegans	8.4e-210
BLAST match view associations BLAST with MGG_05193 MGG_05193 MGG_05193 Cell division control protein 48	protein from Magnaporthe oryzae 70-15	4.6e-198
BLAST match view associations BLAST with CDC48 CDC48 CDC48	gene_product from Candida albicans	9.8e-196
BLAST match view associations BLAST with CDC48 CDC48 CDC48 Putative uncharacterized protein CDC48	protein from Candida albicans SC5314	9.8e-196
BLAST match view associations BLAST with CDC48 CDC48 CDC48 AAA ATPase involved in multiple processes	gene from Saccharomyces cerevisiae	9.0e-193
BLAST match view associations BLAST with PFF0940c PFF0940c PFF0940c cell division cycle protein 48 homologue, putative	gene from Plasmodium falciparum	2.3e-189
BLAST match view associations BLAST with PFF0940c PFF0940c PFF0940c Cell division cycle protein 48 homologue, putative	protein from Plasmodium falciparum 3D7	2.3e-189
BLAST match view associations BLAST with LOC430766 LOC430766 LOC430766 Uncharacterized protein	protein from Gallus gallus	3.3e-150
BLAST match view associations BLAST with PF07_0047 PF07_0047 PF07_0047 cell division cycle ATPase, putative	gene from Plasmodium falciparum	3.4e-113
BLAST match view associations BLAST with PF07_0047 PF07_0047 PF07_0047 Putative cell division cycle ATPase	protein from Plasmodium falciparum 3D7	3.4e-113
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-80
BLAST match view associations BLAST with Spata5 Spata5 Spata5 spermatogenesis associated 5	protein from Mus musculus	5.8e-80
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Spermatogenesis-associated protein 5	protein from Homo sapiens	2.0e-79
BLAST match view associations BLAST with DDB_G0278435 DDB_G0278435 DDB_G0278435 AAA ATPase domain-containing protein	gene from Dictyostelium discoideum	1.8e-74
BLAST match view associations BLAST with CIP111 CIP111 CIP111 Cam interacting protein 111	protein from Arabidopsis thaliana	9.0e-72
BLAST match view associations BLAST with CG5776 CG5776 CG5776	protein from Drosophila melanogaster	9.7e-72
BLAST match view associations BLAST with RIX7 RIX7 RIX7	gene_product from Candida albicans	9.7e-72
BLAST match view associations BLAST with RIX7 RIX7 RIX7 Putative uncharacterized protein	protein from Candida albicans SC5314	9.7e-72
BLAST match view associations BLAST with nvl nvl nvl valosin-containing protein	gene from Dictyostelium discoideum	8.6e-71
BLAST match view associations BLAST with orf19.6432 orf19.6432 orf19.6432	gene_product from Candida albicans	2.0e-69
BLAST match view associations BLAST with Nvl Nvl Nvl nuclear VCP-like	protein from Mus musculus	2.8e-69
BLAST match view associations BLAST with AFG2 AFG2 AFG2 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex	gene from Saccharomyces cerevisiae	3.3e-69
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	3.3e-69
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Gallus gallus	4.2e-69
BLAST match view associations BLAST with Nvl Nvl Nvl nuclear VCP-like	gene from Rattus norvegicus	1.1e-68
BLAST match view associations BLAST with nvl nvl nvl nuclear VCP-like	gene_product from Danio rerio	4.7e-68
BLAST match view associations BLAST with RIX7 RIX7 RIX7 Putative ATPase of the AAA family	gene from Saccharomyces cerevisiae	3.3e-67
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Bos taurus	6.8e-67
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Bos taurus	7.3e-67
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Homo sapiens	1.1e-66
BLAST match view associations BLAST with CDC48C CDC48C CDC48C cell division cycle 48C	protein from Arabidopsis thaliana	1.8e-66
BLAST match view associations BLAST with mac-1 mac-1 mac-1	gene from Caenorhabditis elegans	4.8e-66
BLAST match view associations BLAST with mac-1 mac-1 mac-1 Protein MAC-1	protein from Caenorhabditis elegans	4.8e-66
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Sus scrofa	6.4e-66
BLAST match view associations BLAST with pex6 pex6 pex6 peroxin 6	gene from Dictyostelium discoideum	2.4e-65
BLAST match view associations BLAST with Spata5 Spata5 Spata5 spermatogenesis associated 5	gene from Rattus norvegicus	1.2e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with smid smid smid smallminded	protein from Drosophila melanogaster	3.1e-63
BLAST match view associations BLAST with cdc-48.3 cdc-48.3 cdc-48.3	gene from Caenorhabditis elegans	5.4e-63
BLAST match view associations BLAST with DDB_G0282241 DDB_G0282241 DDB_G0282241	gene from Dictyostelium discoideum	2.3e-62
BLAST match view associations BLAST with PEX6 PEX6 PEX6 peroxin 6	protein from Arabidopsis thaliana	2.5e-62
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with CDC48B CDC48B CDC48B cell division cycle 48B	protein from Arabidopsis thaliana	1.3e-61
BLAST match view associations BLAST with pan pan pan Proteasome-activating nucleotidase	protein from Methanocaldococcus jannaschii DSM 2661	6.9e-61
BLAST match view associations BLAST with pex6 pex6 pex6 peroxisomal biogenesis factor 6	gene_product from Danio rerio	8.3e-61
BLAST match view associations BLAST with PEX1 PEX1 PEX1	gene_product from Candida albicans	2.4e-60
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Likely peroxisomal biogenesis AAA ATPase Pex1	protein from Candida albicans SC5314	2.4e-60
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Uncharacterized protein	protein from Gallus gallus	8.1e-60
BLAST match view associations BLAST with PEX6 PEX6 PEX6 AAA-peroxin	gene from Saccharomyces cerevisiae	1.3e-59
BLAST match view associations BLAST with MGG_06686 MGG_06686 MGG_06686 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.6e-59
BLAST match view associations BLAST with Pex6 Pex6 Pex6 peroxisomal biogenesis factor 6	gene from Rattus norvegicus	1.6e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6	gene_product from Candida albicans	3.2e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Likely peroxisomal biogenesis AAA ATPase Pex6	protein from Candida albicans SC5314	3.2e-57
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Peroxisome biogenesis factor 1	protein from Homo sapiens	4.3e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-57
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Uncharacterized protein	protein from Gallus gallus	5.5e-57
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Uncharacterized protein	protein from Gallus gallus	9.2e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Peroxin Pex6p	protein from Macaca fascicularis	1.6e-56
BLAST match view associations BLAST with MGG_00529 MGG_00529 MGG_00529 Peroxisomal biogenesis factor 6	protein from Magnaporthe oryzae 70-15	1.6e-56
BLAST match view associations BLAST with PF14_0126 PF14_0126 PF14_0126 hypothetical protein, conserved	gene from Plasmodium falciparum	1.8e-56
BLAST match view associations BLAST with PF14_0126 PF14_0126 PF14_0126 AAA family ATPase, putative	protein from Plasmodium falciparum 3D7	1.8e-56
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Uncharacterized protein	protein from Bos taurus	2.0e-56
BLAST match view associations BLAST with MAL8P1.92 MAL8P1.92 MAL8P1.92 ATPase, putative	gene from Plasmodium falciparum	2.1e-56
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Peroxisome biogenesis factor 1	protein from Homo sapiens	3.2e-56
BLAST match view associations BLAST with Pex6 Pex6 Pex6 peroxisomal biogenesis factor 6	protein from Mus musculus	3.3e-56
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1	protein from Bos taurus	3.3e-56
BLAST match view associations BLAST with RVBD_0435c RVBD_0435c RVBD_0435c Transitional endoplasmic reticulum ATPase	protein from Mycobacterium tuberculosis H37Rv	4.8e-56
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Peroxisome assembly factor 2	protein from Homo sapiens	9.0e-56
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007053
        (620 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:...  1704  1.4e-282  2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle...  1687  1.1e-280  2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48...  1681  9.0e-279  2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT...  1464  4.7e-240  2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin...  1477  8.1e-236  2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r...  1472  1.0e-235  2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s...  1472  1.0e-235  2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec...  1472  1.0e-235  2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r...  1472  3.5e-235  2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r...  1472  3.5e-235  2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s...  1472  3.5e-235  2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot...  1470  4.4e-235  2
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot...  1470  4.4e-235  2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r...  1471  7.2e-235  2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r...  1469  7.2e-235  2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r...  1461  5.1e-234  2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r...  1465  6.5e-234  2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ...  1398  3.5e-224  2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso...  1411  5.3e-219  2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh...  1418  1.0e-215  2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas...  1418  1.0e-215  2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh...  1393  8.4e-210  2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas...  1393  8.4e-210  2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro...  1217  4.6e-198  2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer...  1234  6.7e-197  2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc...  1246  3.7e-196  2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic...  1202  9.8e-196  2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized...  1202  9.8e-196  2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul...  1175  9.0e-193  2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis...  1141  2.3e-189  3
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p...  1141  2.3e-189  3
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot...  1466  3.3e-150  1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div...   909  3.4e-113  2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi...   909  3.4e-113  2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein...   749  1.3e-80   3
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat...   767  5.8e-80   2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa...   759  2.0e-79   2
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ...   728  1.8e-74   2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote...   651  9.0e-72   2
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m...   673  9.7e-72   2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica...   668  9.7e-72   2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ...   668  9.7e-72   2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p...   676  8.6e-71   2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog...   709  5.5e-70   1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ...   680  2.0e-69   2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT...   651  2.0e-69   2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1...   627  2.8e-69   3
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE...   678  3.3e-69   2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s...   644  3.3e-69   2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s...   647  4.2e-69   2
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116...   646  1.1e-68   2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"...   626  4.7e-68   2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ...   635  3.3e-67   2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer...   631  5.4e-67   2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s...   624  6.8e-67   2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein...   590  7.3e-67   3
UNIPROTKB|C9IZA5 - symbol:VCP "Transitional endoplasmic r...   678  1.1e-66   1
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4...   648  1.8e-66   2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd...   602  4.8e-66   2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6...   602  4.8e-66   2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein...   599  6.4e-66   3
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:...   636  2.4e-65   3
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5...   587  1.2e-63   3
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing...   647  2.0e-63   1
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing...   647  2.0e-63   1
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing...   647  2.0e-63   1
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "...   648  3.1e-63   1
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh...   609  5.4e-63   2
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468...   617  2.3e-62   2
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702...   618  2.5e-62   2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s...   630  1.3e-61   1
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4...   630  1.3e-61   1
ASPGD|ASPL0000034610 - symbol:pexF species:162425 "Emeric...   576  4.0e-61   4
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl...   603  6.9e-61   2
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"...   610  7.9e-61   2
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge...   630  8.3e-61   1
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica...   605  2.4e-60   2
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen...   605  2.4e-60   2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ...   613  8.1e-60   1
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "...   602  1.3e-59   2
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot...   574  1.6e-59   2
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6...   598  1.6e-57   1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto...   598  1.6e-57   1
CGD|CAL0005974 - symbol:PEX6 species:5476 "Candida albica...   569  3.2e-57   3
UNIPROTKB|Q59ZE6 - symbol:PEX6 "Likely peroxisomal biogen...   569  3.2e-57   3
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac...   571  4.3e-57   2
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ...   594  4.4e-57   1
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote...   432  5.5e-57   3
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ...   582  9.2e-57   2
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95...   582  1.6e-56   1
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes...   585  1.6e-56   2
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet...   526  1.8e-56   3
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p...   526  1.8e-56   3
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ...   565  2.0e-56   3
GENEDB_PFALCIPARUM|MAL8P1.92 - symbol:MAL8P1.92 "ATPase, ...   581  2.1e-56   2
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac...   571  3.2e-56   2
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac...   586  3.3e-56   1
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc...   400  3.3e-56   4
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm...   534  4.8e-56   2
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto...   582  9.0e-56   1

WARNING:  Descriptions of 627 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2101933 [details] [associations]
            symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
            thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
            evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
            regulation of protein catabolic process" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
            GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
            KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
            RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
            SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
            EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
            GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
            PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
            Uniprot:Q9SCN8
        Length = 815

 Score = 1704 (604.9 bits), Expect = 1.4e-282, Sum P(2) = 1.4e-282
 Identities = 332/387 (85%), Positives = 352/387 (90%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + +++KDTHGYVGADLAALCTEAALQCIREKMDVIDL+DE IDAEILNSMAV+++
Sbjct:   396 EDVD-LERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSND 454

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             HF+TALG SNPSALRETVVEVPNV+WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP
Sbjct:   455 HFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSA
Sbjct:   515 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA 574

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIATQ               LNQLLTEMDGM+AKKTVFIIGATNRPDIID
Sbjct:   575 PCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PALLRPGRLDQLIYIPLPDEESR QIFK+CLRKSPV+KDVDLRALAKYTQGFSGADITEI
Sbjct:   635 PALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEI 694

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQR+CKYAIRENIEKDIE+ER+R+E+P             IKA HFEESMKYARRSVSDA
Sbjct:   695 CQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAE-IKAGHFEESMKYARRSVSDA 753

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             DIRKYQAFAQTLQQSRGFGSEFRFPDA
Sbjct:   754 DIRKYQAFAQTLQQSRGFGSEFRFPDA 780

 Score = 1035 (369.4 bits), Expect = 1.4e-282, Sum P(2) = 1.4e-282
 Identities = 194/215 (90%), Positives = 207/215 (96%)

Query:     1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
             M+NQAESSD+KGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV LHPDTMEKLQ FRGD
Sbjct:     1 MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query:    61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
             TILIKGKKRKDTVCIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct:    61 TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query:   121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
             ILP+DDTIEGV+GN+FDAYLKPYF EAYRPVRKGDLFLVRGGMRS+EFKVIETDP EYCV
Sbjct:   121 ILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCV 180

Query:   181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRK 215
             VAPDTEIFCEGEP++REDE RLDEVGYDDVGGVRK
Sbjct:   181 VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRK 215

 Score = 519 (187.8 bits), Expect = 3.0e-157, Sum P(2) = 3.0e-157
 Identities = 101/252 (40%), Positives = 160/252 (63%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             RE    +  V ++D+GG+     +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GK
Sbjct:   196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             TL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DE+DSIA 
Sbjct:   256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               ++QLLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I 
Sbjct:   316 KREKTHGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 372

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             I +PDE  RL++ +   +   +++DVDL  ++K T G+ GAD+  +C  A    IRE ++
Sbjct:   373 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMD 432

Query:   522 K-DIERERRRSE 532
               D++ E   +E
Sbjct:   433 VIDLDDEEIDAE 444

 Score = 40 (19.1 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
 Identities = 6/24 (25%), Positives = 14/24 (58%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    +  V ++D+GG+  + ++
Sbjct:   469 RETVVEVPNVSWEDIGGLENVKRE 492


>TAIR|locus:2831844 [details] [associations]
            symbol:AtCDC48C "cell division cycle 48C" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
            EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
            GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
            KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
            IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
            SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
            EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
            GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
            PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
            Uniprot:Q9LZF6
        Length = 810

 Score = 1687 (598.9 bits), Expect = 1.1e-280, Sum P(2) = 1.1e-280
 Identities = 332/389 (85%), Positives = 347/389 (89%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + +I+KDTHGYVGADLAALCTEAALQCIREKMDVIDLED++IDAEILNSMAV++E
Sbjct:   395 EDVD-LERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNE 453

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             HF TALG SNPSALRETVVEVPNV+WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP
Sbjct:   454 HFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA
Sbjct:   514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIATQ               LNQLLTEMDGM+AKKTVFIIGATNRPDIID
Sbjct:   574 PCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 633

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGRLDQLIYIPLPDE+SRL IFKACLRKSPV+KDVD+ ALAKYTQGFSGADITEI
Sbjct:   634 SALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEI 693

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXX-IKAVHFEESMKYARRSVSD 566
             CQRACKYAIRENIEKDIE ERRRS+NP              I+A HFEESMKYARRSVSD
Sbjct:   694 CQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSD 753

Query:   567 ADIRKYQAFAQTLQQSRGFGSEFRFPDAA 595
             ADIRKYQAFAQTLQQSRGFGSEFRF   A
Sbjct:   754 ADIRKYQAFAQTLQQSRGFGSEFRFDSTA 782

 Score = 1034 (369.0 bits), Expect = 1.1e-280, Sum P(2) = 1.1e-280
 Identities = 198/215 (92%), Positives = 206/215 (95%)

Query:     1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
             MSN+ ESSD+K TK+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct:     1 MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 59

Query:    61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
             TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct:    60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119

Query:   121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
             ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct:   120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179

Query:   181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRK 215
             VAPDTEIFCEGEPV+REDE RLDEVGYDDVGGVRK
Sbjct:   180 VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRK 214

 Score = 519 (187.8 bits), Expect = 3.8e-157, Sum P(2) = 3.8e-157
 Identities = 100/245 (40%), Positives = 157/245 (64%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             RE    +  V ++D+GG+     +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GK
Sbjct:   195 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             TL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DE+DSIA 
Sbjct:   255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               ++QLLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I 
Sbjct:   315 KREKTNGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 371

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             I +PDE  RL++ +   +   +++DVDL  ++K T G+ GAD+  +C  A    IRE ++
Sbjct:   372 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431

Query:   522 K-DIE 525
               D+E
Sbjct:   432 VIDLE 436

 Score = 40 (19.1 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
 Identities = 6/24 (25%), Positives = 14/24 (58%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    +  V ++D+GG+  + ++
Sbjct:   468 RETVVEVPNVSWEDIGGLENVKRE 491


>TAIR|locus:2085064 [details] [associations]
            symbol:CDC48 "cell division cycle 48" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
            "spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
            [GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
            tube growth" evidence=IMP] [GO:0051301 "cell division"
            evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
            glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
            GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
            GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
            GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
            EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
            UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
            SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
            ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
            KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
            HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
            PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
            GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            Uniprot:P54609
        Length = 809

 Score = 1681 (596.8 bits), Expect = 9.0e-279, Sum P(2) = 9.0e-279
 Identities = 331/389 (85%), Positives = 348/389 (89%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + +I+KDTHGYVGADLAALCTEAALQCIREKMDVIDLED++IDAEILNSMAVT+E
Sbjct:   395 EDVD-LERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNE 453

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             HF TALG SNPSALRETVVEVPNV+W DIGGLENVKRELQETVQYPVEHPEKFEKFGMSP
Sbjct:   454 HFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 513

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA
Sbjct:   514 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXX-LNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             PCVLFFDELDSIATQ                LNQLLTEMDGM+AKKTVFIIGATNRPDII
Sbjct:   574 PCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDII 633

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             D ALLRPGRLDQLIYIPLPDE+SRL IFKA LRKSP++KDVD+ ALAKYTQGFSGADITE
Sbjct:   634 DSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITE 693

Query:   507 ICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSD 566
             ICQRACKYAIRENIEKDIE+E+RRSENP             IKA HFEESMKYARRSVSD
Sbjct:   694 ICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSD 753

Query:   567 ADIRKYQAFAQTLQQSRGFGSEFRFPDAA 595
             ADIRKYQAFAQTLQQSRGFGSEFRF ++A
Sbjct:   754 ADIRKYQAFAQTLQQSRGFGSEFRFENSA 782

 Score = 1022 (364.8 bits), Expect = 9.0e-279, Sum P(2) = 9.0e-279
 Identities = 196/215 (91%), Positives = 205/215 (95%)

Query:     1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
             MS  AESSD+K +K+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct:     1 MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 59

Query:    61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
             TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct:    60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119

Query:   121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
             ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct:   120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179

Query:   181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRK 215
             VAPDTEIFCEGEPV+REDE RLD+VGYDDVGGVRK
Sbjct:   180 VAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRK 214

 Score = 520 (188.1 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
 Identities = 100/245 (40%), Positives = 158/245 (64%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             RE    + +V ++D+GG+     +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GK
Sbjct:   195 REDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             TL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DE+DSIA 
Sbjct:   255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               ++QLLT MDG+ ++  V ++GATNRP+ IDPAL R GR D+ I 
Sbjct:   315 KREKTNGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 371

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             I +PDE  RL++ +   +   +++DVDL  ++K T G+ GAD+  +C  A    IRE ++
Sbjct:   372 IGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431

Query:   522 K-DIE 525
               D+E
Sbjct:   432 VIDLE 436

 Score = 39 (18.8 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
 Identities = 6/24 (25%), Positives = 14/24 (58%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    +  V ++D+GG+  + ++
Sbjct:   468 RETVVEVPNVSWNDIGGLENVKRE 491


>DICTYBASE|DDB_G0288065 [details] [associations]
            symbol:cdcD "CDC48 family AAA ATPase" species:44689
            "Dictyostelium discoideum" [GO:0005615 "extracellular space"
            evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
            cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
            [GO:0051301 "cell division" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
            GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
            HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
            KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
            ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
            ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
            EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
            InParanoid:P90532 Uniprot:P90532
        Length = 793

 Score = 1464 (520.4 bits), Expect = 4.7e-240, Sum P(2) = 4.7e-240
 Identities = 285/387 (73%), Positives = 315/387 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             D+   +  +A +THGYVGADLAALCTE+ALQCIREKMDVIDLEDETI AEIL SM+VT +
Sbjct:   389 DETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISAEILESMSVTQD 448

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             HF+TAL  SNPSALRETVVEVP   WEDIGGLE VKREL+ETVQYPVEHPEKF KFGM P
Sbjct:   449 HFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQP 508

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVRE+FDKARQ+A
Sbjct:   509 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAA 568

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGM+AKK VFIIGATNRPDIID
Sbjct:   569 PCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIID 628

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPD  SR+ I KACL KSPV+KDVDL  L + TQGFSGAD+TEI
Sbjct:   629 PAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEI 688

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXX-XIKAVHFEESMKYARRSVSD 566
             CQRACK AIRE+IEKDIE  + R E+               I   HF+E+M+ ARRSVSD
Sbjct:   689 CQRACKLAIRESIEKDIESTKARQESGDTKMEDDSVDPVPEITRDHFQEAMRSARRSVSD 748

Query:   567 ADIRKYQAFAQTLQQSRGFGSEFRFPD 593
              DIRKY++FAQTL QSRG G+ F+FPD
Sbjct:   749 NDIRKYESFAQTLVQSRGLGNNFKFPD 775

 Score = 873 (312.4 bits), Expect = 4.7e-240, Sum P(2) = 4.7e-240
 Identities = 159/203 (78%), Positives = 186/203 (91%)

Query:    13 TKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDT 72
             T +D +  ILERKKAPNRL V+EAINDDNSVV L+P+TM++LQFFRGDT+LIKGKKR+DT
Sbjct:     7 TSKDNNNPILERKKAPNRLFVEEAINDDNSVVTLNPETMDQLQFFRGDTLLIKGKKRRDT 66

Query:    73 VCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVT 132
             VCI L+D T +  KIRMNKVVR+NLRVRLGD++SVHQC+DVKYGKR+H+LP+DDTIEG++
Sbjct:    67 VCIVLSDPTIDPSKIRMNKVVRNNLRVRLGDMISVHQCSDVKYGKRIHVLPIDDTIEGLS 126

Query:   133 GNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGE 192
             GNLFD YLKPYF EAYRPVRKGDLFLVRGGMR+VEFKV+ETDP EYC+VAP+T I CEGE
Sbjct:   127 GNLFDLYLKPYFLEAYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIHCEGE 186

Query:   193 PVRREDENRLDEVGYDDVGGVRK 215
              V+REDE+RLDEVGYDD+GGVRK
Sbjct:   187 AVKREDEDRLDEVGYDDIGGVRK 209

 Score = 520 (188.1 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
 Identities = 103/264 (39%), Positives = 162/264 (61%)

Query:   270 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
             +T +     +  RE    +  V ++DIGG+     +++E V+ P+ HP+ F+  G+ P K
Sbjct:   178 ETFIHCEGEAVKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPK 237

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 389
             G+L YGPPGCGKT++A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP 
Sbjct:   238 GILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPS 297

Query:   390 VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPA 449
             ++F DE+DSIA +               ++QLLT MDG+ ++  V ++GATNRP+ IDPA
Sbjct:   298 IIFIDEIDSIAPKREKTQGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 354

Query:   450 LLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQ 509
             L R GR D+ I I +PD   RL+I +   +   + + VDL A+A  T G+ GAD+  +C 
Sbjct:   355 LRRFGRFDREIDITIPDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCT 414

Query:   510 RACKYAIRENIEK-DIERERRRSE 532
              +    IRE ++  D+E E   +E
Sbjct:   415 ESALQCIREKMDVIDLEDETISAE 438


>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
            symbol:vcp "valosin containing protein"
            species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
            ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
            break" evidence=ISS] [GO:0006302 "double-strand break repair"
            evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
            asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
            evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:2000058 "regulation of protein ubiquitination involved in
            ubiquitin-dependent protein catabolic process" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
            ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
            GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
            GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
            EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
            IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
            ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
            Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
            InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
        Length = 806

 Score = 1477 (525.0 bits), Expect = 8.1e-236, Sum P(2) = 8.1e-236
 Identities = 288/387 (74%), Positives = 324/387 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVPN+ WEDIGGL++VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS+KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSP+SKDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             DIRKY+ FAQTLQQSRGFGS FRFP +
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFPSS 776

 Score = 820 (293.7 bits), Expect = 8.1e-236, Sum P(2) = 8.1e-236
 Identities = 145/210 (69%), Positives = 180/210 (85%)

Query:     7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
             +S  +    D STAIL++K  PNRL+VDE+IN+DNSVV L    M++LQ FRGDT+L+KG
Sbjct:     2 ASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKG 61

Query:    67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
             KKR++TVCI L+DDTC + K+RMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+DD
Sbjct:    62 KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD 121

Query:   127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
             T+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPDT 
Sbjct:   122 TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTV 181

Query:   187 IFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             I CEGEP++REDE   L+EVGYDD+GGVRK
Sbjct:   182 IHCEGEPIKREDEEESLNEVGYDDIGGVRK 211

 Score = 492 (178.3 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
 Identities = 101/248 (40%), Positives = 153/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG+     +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435


>UNIPROTKB|P55072 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
            evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
            complex binding" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
            evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
            [GO:0043231 "intracellular membrane-bounded organelle"
            evidence=ISS] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=ISS]
            [GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
            damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
            evidence=IDA] [GO:0019904 "protein domain specific binding"
            evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
            transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
            protein catabolic process" evidence=IMP;TAS] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=TAS]
            [GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
            ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
            apoptotic process" evidence=TAS] [GO:0045184 "establishment of
            protein localization" evidence=TAS] [GO:0019985 "translesion
            synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
            evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
            asparagine" evidence=IMP] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
            "positive regulation of protein catabolic process" evidence=IDA]
            [GO:0031334 "positive regulation of protein complex assembly"
            evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
            GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
            GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
            GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
            GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
            PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
            InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
            GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
            GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
            PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
            PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
            EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
            IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
            PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
            PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
            DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
            PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
            REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
            PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
            KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
            HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
            MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
            InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
            EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
            ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
            Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
        Length = 806

 Score = 1472 (523.2 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 824 (295.1 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 148/212 (69%), Positives = 181/212 (85%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 6.8e-132, Sum P(2) = 6.8e-132
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>MGI|MGI:99919 [details] [associations]
            symbol:Vcp "valosin containing protein" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
            "receptor binding" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
            "cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
            "double-strand break repair" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IGI]
            [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=IDA] [GO:0006974 "response to DNA damage
            stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
            evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
            asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
            evidence=ISO] [GO:0019904 "protein domain specific binding"
            evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
            [GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
            [GO:0030970 "retrograde protein transport, ER to cytosol"
            evidence=ISO] [GO:0031334 "positive regulation of protein complex
            assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
            evidence=ISO;IDA] [GO:0032403 "protein complex binding"
            evidence=ISO] [GO:0032436 "positive regulation of proteasomal
            ubiquitin-dependent protein catabolic process" evidence=ISO]
            [GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
            "identical protein binding" evidence=ISO] [GO:0043231
            "intracellular membrane-bounded organelle" evidence=ISO]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
            binding" evidence=ISO] [GO:0045732 "positive regulation of protein
            catabolic process" evidence=ISO] [GO:0051260 "protein
            homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
            evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
            GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
            GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
            GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
            GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
            KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
            GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
            GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
            PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
            ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
            EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
            EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
            EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
            UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
            PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
            PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
            SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
            STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
            UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
            Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
            UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
            EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
            Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
        Length = 806

 Score = 1472 (523.2 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 824 (295.1 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 148/212 (69%), Positives = 181/212 (85%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 6.8e-132, Sum P(2) = 6.8e-132
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>RGD|621595 [details] [associations]
            symbol:Vcp "valosin-containing protein" species:10116 "Rattus
            norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
            [GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
            [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
            process" evidence=IDA] [GO:0006302 "double-strand break repair"
            evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
            vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
            stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
            evidence=IEA] [GO:0016567 "protein ubiquitination"
            evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0018279 "protein N-linked glycosylation via asparagine"
            evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
            evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
            evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
            evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
            process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
            transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
            regulation of protein complex assembly" evidence=IEA;ISO]
            [GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
            "protein complex binding" evidence=IPI] [GO:0032436 "positive
            regulation of proteasomal ubiquitin-dependent protein catabolic
            process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
            break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0043231 "intracellular membrane-bounded
            organelle" evidence=IDA] [GO:0043234 "protein complex"
            evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
            "positive regulation of protein catabolic process" evidence=ISO]
            [GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
            "aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
            GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
            GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
            GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
            GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
            GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
            CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
            IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
            ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
            MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
            World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
            GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
            NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
            Uniprot:P46462
        Length = 806

 Score = 1472 (523.2 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 824 (295.1 bits), Expect = 1.0e-235, Sum P(2) = 1.0e-235
 Identities = 148/212 (69%), Positives = 181/212 (85%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 6.8e-132, Sum P(2) = 6.8e-132
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>UNIPROTKB|G3X757 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
            evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
            process" evidence=IEA] [GO:0035861 "site of double-strand break"
            evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
            [GO:0031334 "positive regulation of protein complex assembly"
            evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
            cytosol" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
            evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
            asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
            GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
            GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
            ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
        Length = 806

 Score = 1472 (523.2 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 819 (293.4 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>UNIPROTKB|Q3ZBT1 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
            evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
            "site of double-strand break" evidence=ISS] [GO:0018279 "protein
            N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
            "ER-associated protein catabolic process" evidence=ISS] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
            "lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
            GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
            EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
            UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
            STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
            InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
        Length = 806

 Score = 1472 (523.2 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 819 (293.4 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>UNIPROTKB|E2RLQ9 [details] [associations]
            symbol:VCP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
            [GO:0045732 "positive regulation of protein catabolic process"
            evidence=IEA] [GO:0035861 "site of double-strand break"
            evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
            [GO:0031334 "positive regulation of protein complex assembly"
            evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
            cytosol" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
            evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
            asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
            GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
            GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
            NextBio:20856352 Uniprot:E2RLQ9
        Length = 822

 Score = 1472 (523.2 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   408 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 466

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   467 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 526

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   527 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 586

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   587 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 646

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   647 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 706

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   707 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 766

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   767 DIRKYEMFAQTLQQSRGFGS-FRFP 790

 Score = 819 (293.4 bits), Expect = 3.5e-235, Sum P(2) = 3.5e-235
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:    18 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 75

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+  C DVKYGKR+H+LP+
Sbjct:    76 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 135

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   136 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 195

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   196 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 227

 Score = 490 (177.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   207 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 266

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   267 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 326

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   327 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 383

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   384 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 443

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   444 DLIDLEDE 451

 Score = 39 (18.8 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   481 RETVVEVPQVTWEDIGGLEDVKRE 504


>UNIPROTKB|F1P4V8 [details] [associations]
            symbol:LOC426240 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
            EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
            EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
            EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
            Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
        Length = 810

 Score = 1470 (522.5 bits), Expect = 4.4e-235, Sum P(2) = 4.4e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   396 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 454

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   455 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 514

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   515 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 574

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   575 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 634

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   635 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 694

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   695 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 754

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   755 DIRKYEMFAQTLQQSRGFGS-FRFP 778

 Score = 820 (293.7 bits), Expect = 4.4e-235, Sum P(2) = 4.4e-235
 Identities = 148/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  SD+K    D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGSDSKAD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 487 (176.5 bits), Expect = 3.7e-131, Sum P(2) = 3.7e-131
 Identities = 100/249 (40%), Positives = 151/249 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++  ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXL-NQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQL 459
             +                + +QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ 
Sbjct:   311 SDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 370

Query:   460 IYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
             + I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ 
Sbjct:   371 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 430

Query:   520 IEK-DIERE 527
             ++  D+E E
Sbjct:   431 MDLIDLEDE 439

 Score = 39 (18.8 bits), Expect = 7.3e-84, Sum P(2) = 7.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   469 RETVVEVPQVTWEDIGGLEDVKRE 492


>UNIPROTKB|E1BTS8 [details] [associations]
            symbol:LOC426240 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
            EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
            EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
            IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
            Uniprot:E1BTS8
        Length = 804

 Score = 1470 (522.5 bits), Expect = 4.4e-235, Sum P(2) = 4.4e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   390 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 448

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   449 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 508

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   509 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 568

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   569 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 628

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   629 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 688

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   689 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 748

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   749 DIRKYEMFAQTLQQSRGFGS-FRFP 772

 Score = 820 (293.7 bits), Expect = 4.4e-235, Sum P(2) = 4.4e-235
 Identities = 148/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  SD+K    D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGSDSKAD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 402 (146.6 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
 Identities = 91/248 (36%), Positives = 134/248 (54%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GE E+  R+    A         F   D   
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFP 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
             +                ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 SPQTHGEVERRI-----VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 365

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   366 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 425

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   426 DLIDLEDE 433

 Score = 39 (18.8 bits), Expect = 7.3e-84, Sum P(2) = 7.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   463 RETVVEVPQVTWEDIGGLEDVKRE 486


>UNIPROTKB|Q6GL04 [details] [associations]
            symbol:vcp "Transitional endoplasmic reticulum ATPase"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
            "chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0006302 "double-strand break repair"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
            N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
            "translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
            protein catabolic process" evidence=ISS] [GO:0032403 "protein
            complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
            evidence=ISS] [GO:0035861 "site of double-strand break"
            evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
            GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
            GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
            GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
            InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
            GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
            EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
            ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
            GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
            InParanoid:Q6GL04 Uniprot:Q6GL04
        Length = 805

 Score = 1471 (522.9 bits), Expect = 7.2e-235, Sum P(2) = 7.2e-235
 Identities = 289/385 (75%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 817 (292.7 bits), Expect = 7.2e-235, Sum P(2) = 7.2e-235
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  SD+K    D STAIL++K  PNRL+VDE+IN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGSDSKSD--DLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 494 (179.0 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
 Identities = 102/248 (41%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   +S DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>UNIPROTKB|P03974 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
            evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
            "double-strand break repair" evidence=ISS] [GO:0018279 "protein
            N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
            "ER-associated protein catabolic process" evidence=ISS] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
            "lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
            GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
            GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
            CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
            RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
            SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
            Uniprot:P03974
        Length = 806

 Score = 1469 (522.2 bits), Expect = 7.2e-235, Sum P(2) = 7.2e-235
 Identities = 288/385 (74%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQ+ VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 819 (293.4 bits), Expect = 7.2e-235, Sum P(2) = 7.2e-235
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 40 (19.1 bits), Expect = 7.3e-84, Sum P(2) = 7.3e-84
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKDTHGYV 224
             RE    + +V ++D+GG+  + ++    V
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRELQDLV 493


>UNIPROTKB|F1SIH8 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
            EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
            Uniprot:F1SIH8
        Length = 808

 Score = 1461 (519.4 bits), Expect = 5.1e-234, Sum P(2) = 5.1e-234
 Identities = 289/387 (74%), Positives = 321/387 (82%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADIT 505
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+K  DVDL  LAK T GFSGAD+T
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLT 690

Query:   506 EICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVS 565
             EICQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVS
Sbjct:   691 EICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVS 750

Query:   566 DADIRKYQAFAQTLQQSRGFGSEFRFP 592
             D DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DNDIRKYEMFAQTLQQSRGFGS-FRFP 776

 Score = 819 (293.4 bits), Expect = 5.1e-234, Sum P(2) = 5.1e-234
 Identities = 147/212 (69%), Positives = 180/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  +D+KG   D STAIL++K  PNRL+VDEAIN+DNSVV L    M++LQ FRGDT+L+
Sbjct:     2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+  C DVKYGKR+H+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 490 (177.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 101/248 (40%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>UNIPROTKB|P23787 [details] [associations]
            symbol:vcp "Transitional endoplasmic reticulum ATPase"
            species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
            "response to DNA damage stimulus" evidence=ISS] [GO:0016567
            "protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
            via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
            evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
            evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
            [GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
            "site of double-strand break" evidence=ISS] [GO:0035101 "FACT
            complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
            GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
            GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
            GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
            EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
            ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
            KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
        Length = 805

 Score = 1465 (520.8 bits), Expect = 6.5e-234, Sum P(2) = 6.5e-234
 Identities = 288/385 (74%), Positives = 321/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++A +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   392 DDVD-LEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 510

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 570

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   571 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIID 630

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVD+  LAK T GFSGAD+TEI
Sbjct:   631 PAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEI 690

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   691 CQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 750

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   751 DIRKYEMFAQTLQQSRGFGS-FRFP 774

 Score = 814 (291.6 bits), Expect = 6.5e-234, Sum P(2) = 6.5e-234
 Identities = 147/212 (69%), Positives = 179/212 (84%)

Query:     5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             A  SD K    D STAIL++K  PNRL+VDE+IN+DNS+V L    M++LQ FRGDT+L+
Sbjct:     2 ASGSDTKSD--DLSTAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLL 59

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C DVKYGKRVH+LP+
Sbjct:    60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPI 119

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
             DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP  YC+VAPD
Sbjct:   120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179

Query:   185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             T I CEGEP++REDE   L+EVGYDD+GG RK
Sbjct:   180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211

 Score = 494 (179.0 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
 Identities = 102/248 (41%), Positives = 152/248 (61%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 310

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ +
Sbjct:   311 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   +S DVDL  +A  T G  GAD+  +C  A   AIR+ +
Sbjct:   368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427

Query:   521 EK-DIERE 527
             +  D+E E
Sbjct:   428 DLIDLEDE 435

 Score = 39 (18.8 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    + +V ++D+GG+  + ++
Sbjct:   465 RETVVEVPQVTWEDIGGLEDVKRE 488


>ZFIN|ZDB-GENE-060312-22 [details] [associations]
            symbol:zgc:136908 "zgc:136908" species:7955 "Danio
            rerio" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
            GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
            InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
            EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
            UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
            Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
            InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
        Length = 805

 Score = 1398 (497.2 bits), Expect = 3.5e-224, Sum P(2) = 3.5e-224
 Identities = 273/387 (70%), Positives = 317/387 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + +I+ +THG+VGADLAALC+EAALQ IR+KM +IDLED++IDA++LNS+AVT +
Sbjct:   394 EDVD-LEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMD 452

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              FK AL  SNPSALRETVVEVP+VNWEDIGGL+ VKRELQE VQYPVE+P+KF KFGM+P
Sbjct:   453 DFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTP 512

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S+GVLFYGPPGCGKTLLAKAIANECQANF+S+KGPELLTMWFGESEANVR++FDKARQ+A
Sbjct:   513 SRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAA 572

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PC+LFFDELDSIA                 +NQ+LTEMDGM+ KK VFIIGATNRPDIID
Sbjct:   573 PCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIID 632

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPD  SR  I +A LRKSPV+KDVDL  L+K T+GFSGAD+TEI
Sbjct:   633 PAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEI 692

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE IE +I  ER+R                 I+  HFEE+M++ARRSVSD 
Sbjct:   693 CQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVPEIRKDHFEEAMRFARRSVSDN 752

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             DIRKY+ FAQTLQQSRGFG+ FRFP A
Sbjct:   753 DIRKYEMFAQTLQQSRGFGN-FRFPTA 778

 Score = 789 (282.8 bits), Expect = 3.5e-224, Sum P(2) = 3.5e-224
 Identities = 141/210 (67%), Positives = 176/210 (83%)

Query:     7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
             +SD K    DFSTAIL++K  PNRL+VDEA N+DNS+V L    ME+LQ FRGDT++++G
Sbjct:     6 ASDPK--TEDFSTAILKQKIRPNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTVVLRG 63

Query:    67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
             +KR+ TVCI L DDTC   ++RMN+V R+NLRVRLGDV+S+H C DVKYGKR+H+LP+DD
Sbjct:    64 RKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVLPIDD 123

Query:   127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
             TIEG+TGNLFD +LKPYF EAYRPV KGD+FLVRGGMR+VEFKV+ETDP  +C+VAPDT 
Sbjct:   124 TIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAPDTI 183

Query:   187 IFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             I CEGEP++REDE   L+++GYDD+GG RK
Sbjct:   184 IHCEGEPIKREDEEESLNDIGYDDIGGCRK 213

 Score = 476 (172.6 bits), Expect = 1.0e-126, Sum P(2) = 1.0e-126
 Identities = 98/246 (39%), Positives = 150/246 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N + ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   193 REDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 252

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA
Sbjct:   253 KTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 312

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V ++ ATNRP+ +D AL R GR D+ I
Sbjct:   313 PKREKTHGEVERRI---VSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREI 369

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   +S+DVDL  ++  T G  GAD+  +C  A   AIR+ +
Sbjct:   370 DIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKM 429

Query:   521 EK-DIE 525
                D+E
Sbjct:   430 TLIDLE 435

 Score = 39 (18.8 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    +  V ++D+GG+ ++ ++
Sbjct:   467 RETVVEVPHVNWEDIGGLDEVKRE 490


>FB|FBgn0261014 [details] [associations]
            symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
            [GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
            [GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
            "Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
            plasm oskar mRNA localization" evidence=IMP] [GO:0016320
            "endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
            "microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
            "endoplasmic reticulum organization" evidence=IMP] [GO:0045451
            "pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
            "oocyte microtubule cytoskeleton polarization" evidence=IMP]
            [GO:0008104 "protein localization" evidence=IMP] [GO:0042052
            "rhabdomere development" evidence=IMP] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
            [GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005875 "microtubule associated
            complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
            process" evidence=IMP] [GO:0006200 "ATP catabolic process"
            evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IMP]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
            GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
            GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
            GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
            InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
            EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
            RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
            ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
            PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
            KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
            InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
            NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
        Length = 801

 Score = 1411 (501.8 bits), Expect = 5.3e-219, Sum P(2) = 5.3e-219
 Identities = 277/387 (71%), Positives = 317/387 (81%)

Query:   207 YDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTD 266
             +DDV  + +IA ++HG+VGADLA+LC+EAALQ IREKMD+IDLED+ IDAE+L S+AVT 
Sbjct:   388 HDDVD-LEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTM 446

Query:   267 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 326
             E+F+ A+  S+PSALRETVVEVPN  W DIGGLE+VK+ELQE VQYPVEHP+KF KFGM 
Sbjct:   447 ENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQ 506

Query:   327 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 386
             PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR+IFDKAR +
Sbjct:   507 PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSA 566

Query:   387 APCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             APCVLFFDELDSIA                 +NQ+LTEMDGM AKK VFIIGATNRPDII
Sbjct:   567 APCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDII 626

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPA+LRPGRLDQLIYIPLPD++SR  I KA LRKSP++K+VDL  +AK TQGFSGAD+TE
Sbjct:   627 DPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTE 686

Query:   507 ICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXX-XIKAVHFEESMKYARRSVS 565
             ICQRACK AIR+ IE +I RE+ R+EN               I + HFEE+MK+ARRSVS
Sbjct:   687 ICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVS 746

Query:   566 DADIRKYQAFAQTLQQSRGFGSEFRFP 592
             D DIRKY+ FAQTLQQSRGFG  FRFP
Sbjct:   747 DNDIRKYEMFAQTLQQSRGFGQNFRFP 773

 Score = 727 (261.0 bits), Expect = 5.3e-219, Sum P(2) = 5.3e-219
 Identities = 134/209 (64%), Positives = 168/209 (80%)

Query:     8 SDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGK 67
             +D+KG   D +TAIL+RK  PNRL+V+EA NDDNSVV L    M++LQ FRGDT+++KGK
Sbjct:     2 ADSKG--EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query:    68 KRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDT 127
             +RK+TVCI L+DDTC + KIRMN+VVR+NL V L DVVSV  C DVKYGKRV ILP+D++
Sbjct:    60 RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query:   128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEI 187
              EGVTGNLF+ YLKPYF EAYRP+  GD F+VR  MR +EFKV+ TDP  YC+VAP+T I
Sbjct:   120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179

Query:   188 FCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             FC+G+P++RE+E   L+ VGYDD+GG RK
Sbjct:   180 FCDGDPIKREEEEESLNAVGYDDIGGCRK 208

 Score = 480 (174.0 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
 Identities = 98/253 (38%), Positives = 152/253 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++DIGG      +++E V+ P+ HP  F+  G+ P +G+L YGPPG G
Sbjct:   188 REEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 247

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++A +++P ++F DE+D+IA
Sbjct:   248 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIA 307

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDGM     + ++ ATNRP+ IDPAL R GR D+ I
Sbjct:   308 PKRDKTHGEVERRI---VSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREI 364

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL++ +   +   +  DVDL  +A  + G  GAD+  +C  A    IRE +
Sbjct:   365 DIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKM 424

Query:   521 EK-DIERERRRSE 532
             +  D+E ++  +E
Sbjct:   425 DLIDLEDDKIDAE 437


>WB|WBGene00008053 [details] [associations]
            symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
            [GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
            helicase activity" evidence=IEA] [GO:0009792 "embryo development
            ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0051301 "cell division"
            evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
            "meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=IMP] [GO:0071712 "ER-associated
            misfolded protein catabolic process" evidence=IGI] [GO:0034098
            "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
            eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
            KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
            GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
            RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
            DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
            PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
            EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
            KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
            InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
        Length = 810

 Score = 1418 (504.2 bits), Expect = 1.0e-215, Sum P(2) = 1.0e-215
 Identities = 274/393 (69%), Positives = 319/393 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + ++A + HG+VGADLA+LC+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT E
Sbjct:   397 EDVD-LEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ A+G S+PSALRE VVE PN  W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM P
Sbjct:   456 NFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 515

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR++FDKAR +A
Sbjct:   516 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 575

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGM+AKK VFIIGATNRPDIID
Sbjct:   576 PCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIID 635

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE SRLQIFKA LRK+P+S D+DL  LAK T GFSGAD+TEI
Sbjct:   636 PAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEI 695

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXX----IKAVHFEESMKYARRS 563
             CQRACK AIRE+IE++I +E+ R +                   I   HFEE+MK+ARRS
Sbjct:   696 CQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRS 755

Query:   564 VSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAP 596
             V+D DIRKY+ FAQTLQQSRGFG+ F+FP  AP
Sbjct:   756 VTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAP 788

 Score = 689 (247.6 bits), Expect = 1.0e-215, Sum P(2) = 1.0e-215
 Identities = 130/217 (59%), Positives = 170/217 (78%)

Query:     1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
             M++     D K  K D  +TAIL+ KK PNRL++D++ NDDNS+V+L    M++L  FRG
Sbjct:     1 MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60

Query:    60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
             D++++KGKKR++TV I L  D C   KI+MNKVVR+NLR RLGDVVS+   A ++YGKRV
Sbjct:    61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISS-AQLEYGKRV 119

Query:   120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
             H+LP+DDTIEG+TGNLFD +L+PYFT+AYRPV KGD+F V+  MR+VEFKV+ETDP   C
Sbjct:   120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPAC 179

Query:   180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             +VAPDT I  EG+P++RE+E   L+EVGYDD+GGVRK
Sbjct:   180 IVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRK 216

 Score = 477 (173.0 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
 Identities = 98/246 (39%), Positives = 149/246 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++D+GG+     +++E V+ P+ HP+ F+  G+ P +G+L +GPPG G
Sbjct:   196 REEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTG 255

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F +  +++P +LF DE+D+IA
Sbjct:   256 KTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIA 315

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V +I ATNRP+ ID AL R GR D+ I
Sbjct:   316 PKREKAHGEVEKRI---VSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREI 372

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   + +DVDL  +A    GF GAD+  +C  A    IRE +
Sbjct:   373 DIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKM 432

Query:   521 EK-DIE 525
             E  D+E
Sbjct:   433 ELIDLE 438


>UNIPROTKB|P54812 [details] [associations]
            symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
            homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
            "identical protein binding" evidence=IPI] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
            eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
            KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
            GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
            RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
            DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
            PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
            EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
            KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
            InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
        Length = 810

 Score = 1418 (504.2 bits), Expect = 1.0e-215, Sum P(2) = 1.0e-215
 Identities = 274/393 (69%), Positives = 319/393 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  + ++A + HG+VGADLA+LC+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT E
Sbjct:   397 EDVD-LEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ A+G S+PSALRE VVE PN  W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM P
Sbjct:   456 NFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 515

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR++FDKAR +A
Sbjct:   516 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 575

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGM+AKK VFIIGATNRPDIID
Sbjct:   576 PCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIID 635

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE SRLQIFKA LRK+P+S D+DL  LAK T GFSGAD+TEI
Sbjct:   636 PAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEI 695

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXX----IKAVHFEESMKYARRS 563
             CQRACK AIRE+IE++I +E+ R +                   I   HFEE+MK+ARRS
Sbjct:   696 CQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRS 755

Query:   564 VSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAP 596
             V+D DIRKY+ FAQTLQQSRGFG+ F+FP  AP
Sbjct:   756 VTDNDIRKYEMFAQTLQQSRGFGNNFKFPGEAP 788

 Score = 689 (247.6 bits), Expect = 1.0e-215, Sum P(2) = 1.0e-215
 Identities = 130/217 (59%), Positives = 170/217 (78%)

Query:     1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
             M++     D K  K D  +TAIL+ KK PNRL++D++ NDDNS+V+L    M++L  FRG
Sbjct:     1 MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60

Query:    60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
             D++++KGKKR++TV I L  D C   KI+MNKVVR+NLR RLGDVVS+   A ++YGKRV
Sbjct:    61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISS-AQLEYGKRV 119

Query:   120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
             H+LP+DDTIEG+TGNLFD +L+PYFT+AYRPV KGD+F V+  MR+VEFKV+ETDP   C
Sbjct:   120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPAC 179

Query:   180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             +VAPDT I  EG+P++RE+E   L+EVGYDD+GGVRK
Sbjct:   180 IVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRK 216

 Score = 477 (173.0 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
 Identities = 98/246 (39%), Positives = 149/246 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N V ++D+GG+     +++E V+ P+ HP+ F+  G+ P +G+L +GPPG G
Sbjct:   196 REEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTG 255

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F +  +++P +LF DE+D+IA
Sbjct:   256 KTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIA 315

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  V +I ATNRP+ ID AL R GR D+ I
Sbjct:   316 PKREKAHGEVEKRI---VSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREI 372

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   + +DVDL  +A    GF GAD+  +C  A    IRE +
Sbjct:   373 DIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKM 432

Query:   521 EK-DIE 525
             E  D+E
Sbjct:   433 ELIDLE 438


>WB|WBGene00007352 [details] [associations]
            symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
            [GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
            helicase activity" evidence=IEA] [GO:0009792 "embryo development
            ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
            "collagen and cuticulin-based cuticle development" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0051301 "cell division"
            evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
            "meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=IMP] [GO:0071712 "ER-associated
            misfolded protein catabolic process" evidence=IGI] [GO:0034098
            "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
            GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
            eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
            HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
            GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
            ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
            MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
            EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
            KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
            InParanoid:P54811 NextBio:884814 Uniprot:P54811
        Length = 809

 Score = 1393 (495.4 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 276/390 (70%), Positives = 317/390 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + +IA + HG+VGADLA+LC+EAALQ IREKM++IDLED+ IDAE+LNS+AVT E
Sbjct:   398 DDVD-LEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ A G S+PSALRE VVE PN  W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM P
Sbjct:   457 NFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 516

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR++FDKAR +A
Sbjct:   517 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 576

Query:   388 PCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             PCVLFFDELDSIA  +               +NQ+LTEMDGM+AKK VFIIGATNRPDII
Sbjct:   577 PCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDII 636

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPA+LRPGRLDQLIYIPLPDE SR QI KA LRK+P+SKD+DL  LAK T GFSGAD+TE
Sbjct:   637 DPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTE 696

Query:   507 ICQRACKYAIRENIEKDI--ERER--RRSENPXXXXXXXXXXXXXIKAVHFEESMKYARR 562
             ICQRACK AIRE+IEK+I  E+ER  R++                I   HFEE+MK+ARR
Sbjct:   697 ICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARR 756

Query:   563 SVSDADIRKYQAFAQTLQQSRGFGSEFRFP 592
             SV+D DIRKY+ FAQTLQQSRGFG+ F+FP
Sbjct:   757 SVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786

 Score = 658 (236.7 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 118/217 (54%), Positives = 166/217 (76%)

Query:     1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
             M++       K  K D  STAIL+ K  PNRL+VD++  DDNSV+ +    M++L  FRG
Sbjct:     1 MASVPTHQSEKEKKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRG 60

Query:    60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
             D +++KGKKRK++V I ++D++C   K+RMN+VVR+NLR+RLGDVVS+    ++ YG R+
Sbjct:    61 DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI 120

Query:   120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
             H+LP+DDTIEG+TGNLFD +LKPYF EAYRP+ KGD+F V+  MR+VEFKV+ET+P   C
Sbjct:   121 HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPAC 180

Query:   180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             +V+PDT I  EG+P++RE+E   ++++GYDD+GGVRK
Sbjct:   181 IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRK 217

 Score = 475 (172.3 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
 Identities = 96/253 (37%), Positives = 153/253 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N + ++D+GG+     +++E V+ P+ HP+ F+  G+ P +G+L +GPPG G
Sbjct:   197 REEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTG 256

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  + F  + GPE+++   GESE+N+R+ F++  ++ P +LF DE+D+IA
Sbjct:   257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  + +I ATNRP+ ID AL R GR D+ I
Sbjct:   317 PKREKTNGEVERRI---VSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A    GF GAD+  +C  A    IRE +
Sbjct:   374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKM 433

Query:   521 EK-DIERERRRSE 532
             E  D+E ++  +E
Sbjct:   434 ELIDLEDDQIDAE 446

 Score = 37 (18.1 bits), Expect = 3.8e-144, Sum P(2) = 3.8e-144
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             DA   KR+ +   +ER+     L + + +   +++VV+
Sbjct:   313 DAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVI 350


>UNIPROTKB|P54811 [details] [associations]
            symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
            homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
            "protein binding" evidence=IPI] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
            GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
            GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
            OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
            GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
            RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
            DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
            PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
            EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
            UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
            NextBio:884814 Uniprot:P54811
        Length = 809

 Score = 1393 (495.4 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 276/390 (70%), Positives = 317/390 (81%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + +IA + HG+VGADLA+LC+EAALQ IREKM++IDLED+ IDAE+LNS+AVT E
Sbjct:   398 DDVD-LEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ A G S+PSALRE VVE PN  W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM P
Sbjct:   457 NFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQP 516

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR++FDKAR +A
Sbjct:   517 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA 576

Query:   388 PCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             PCVLFFDELDSIA  +               +NQ+LTEMDGM+AKK VFIIGATNRPDII
Sbjct:   577 PCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDII 636

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPA+LRPGRLDQLIYIPLPDE SR QI KA LRK+P+SKD+DL  LAK T GFSGAD+TE
Sbjct:   637 DPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTE 696

Query:   507 ICQRACKYAIRENIEKDI--ERER--RRSENPXXXXXXXXXXXXXIKAVHFEESMKYARR 562
             ICQRACK AIRE+IEK+I  E+ER  R++                I   HFEE+MK+ARR
Sbjct:   697 ICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARR 756

Query:   563 SVSDADIRKYQAFAQTLQQSRGFGSEFRFP 592
             SV+D DIRKY+ FAQTLQQSRGFG+ F+FP
Sbjct:   757 SVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786

 Score = 658 (236.7 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 118/217 (54%), Positives = 166/217 (76%)

Query:     1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
             M++       K  K D  STAIL+ K  PNRL+VD++  DDNSV+ +    M++L  FRG
Sbjct:     1 MASVPTHQSEKEKKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRG 60

Query:    60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
             D +++KGKKRK++V I ++D++C   K+RMN+VVR+NLR+RLGDVVS+    ++ YG R+
Sbjct:    61 DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI 120

Query:   120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
             H+LP+DDTIEG+TGNLFD +LKPYF EAYRP+ KGD+F V+  MR+VEFKV+ET+P   C
Sbjct:   121 HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPAC 180

Query:   180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRK 215
             +V+PDT I  EG+P++RE+E   ++++GYDD+GGVRK
Sbjct:   181 IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRK 217

 Score = 475 (172.3 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
 Identities = 96/253 (37%), Positives = 153/253 (60%)

Query:   282 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 340
             RE   E  N + ++D+GG+     +++E V+ P+ HP+ F+  G+ P +G+L +GPPG G
Sbjct:   197 REEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTG 256

Query:   341 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
             KTL+A+A+ANE  + F  + GPE+++   GESE+N+R+ F++  ++ P +LF DE+D+IA
Sbjct:   257 KTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIA 316

Query:   401 TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 460
              +               ++QLLT MDG+  +  + +I ATNRP+ ID AL R GR D+ I
Sbjct:   317 PKREKTNGEVERRI---VSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373

Query:   461 YIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              I +PD   RL+I +   +   ++ DVDL  +A    GF GAD+  +C  A    IRE +
Sbjct:   374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKM 433

Query:   521 EK-DIERERRRSE 532
             E  D+E ++  +E
Sbjct:   434 ELIDLEDDQIDAE 446

 Score = 37 (18.1 bits), Expect = 3.8e-144, Sum P(2) = 3.8e-144
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             DA   KR+ +   +ER+     L + + +   +++VV+
Sbjct:   313 DAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVI 350


>UNIPROTKB|G4N517 [details] [associations]
            symbol:MGG_05193 "Cell division control protein 48"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
            Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
            RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
            EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
            Uniprot:G4N517
        Length = 820

 Score = 1217 (433.5 bits), Expect = 4.6e-198, Sum P(2) = 4.6e-198
 Identities = 242/390 (62%), Positives = 301/390 (77%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + +IA +THGYVG+D+AALC+EAA+Q IREKMD+IDL+++TIDAE+L+S+ VT E
Sbjct:   410 DDVD-LEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 468

Query:   268 HFKTALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 326
             +F+ ALG SNPSALRE  VVEVPNV WEDIGGL+ VK++L+E VQYPV+HPEKF KFG+S
Sbjct:   469 NFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLS 528

Query:   327 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 386
             PS+GVLFYGPPG GKT+LAKA+ANEC ANFISVKGPELL+MWFGESE+N+R+IFDKAR +
Sbjct:   529 PSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAA 588

Query:   387 APCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             APC++F DELDSIA                 +NQLLTEMDGM++KK VF+IGATNRP+ +
Sbjct:   589 APCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQL 648

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPAL RPGRLD LIY+PLPDE  RL I KA LRK+PVS DVDL+ +A  T GFSGAD+  
Sbjct:   649 DPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGF 708

Query:   507 ICQRACKYAIRENIEKDIERERR---RSENPXXXXXXXXXXXXXIKAVHFEESMKYARRS 563
             I QRA K AI+E+I  DI R +      E+               K  HFEE+M+ AR+S
Sbjct:   709 ITQRAVKIAIKESITADINRTKALEAAGEDVPMDEDAEDPVPELTKR-HFEEAMQQARKS 767

Query:   564 VSDADIRKYQAFAQTLQQSRGFGSEFRFPD 593
             VSD +IR+Y+AFAQ ++ + G G+ F+FP+
Sbjct:   768 VSDVEIRRYEAFAQQMKNA-GPGAFFKFPE 796

 Score = 723 (259.6 bits), Expect = 4.6e-198, Sum P(2) = 4.6e-198
 Identities = 132/209 (63%), Positives = 169/209 (80%)

Query:     8 SDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGK 67
             +D K  + D +TAIL++KK PN+L+V +A NDDNS++ L   TME LQ FRGDT+L++GK
Sbjct:    22 ADVK-EESDVATAILKKKKKPNQLMVADATNDDNSIIALSNSTMEALQLFRGDTVLVRGK 80

Query:    68 KRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDT 127
             KRKDTV I LADD  ++   R+N+VVR NLRV+ GDVV++H C D+KY KR+ +LP+ DT
Sbjct:    81 KRKDTVLIVLADDELDDGSARLNRVVRHNLRVKHGDVVTIHPCPDIKYAKRIAVLPIADT 140

Query:   128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEI 187
             +EG+TG+LFD +L PYF EAYRPVR+GD+FLVRGGMR VEFKV+E DPPEY +VA DT I
Sbjct:   141 VEGLTGSLFDVFLAPYFREAYRPVRQGDIFLVRGGMRQVEFKVVEVDPPEYGIVAQDTVI 200

Query:   188 FCEGEPVRR-EDENRLDEVGYDDVGGVRK 215
              CEGEP++R E+EN L+EVGYDD+GG RK
Sbjct:   201 HCEGEPIQRDEEENNLNEVGYDDIGGCRK 229

 Score = 500 (181.1 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
 Identities = 96/238 (40%), Positives = 149/238 (62%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++DIGG      +++E V+ P+ HP+ F+  G+ P +GVL YGPPG GKTL+A+A+AN
Sbjct:   219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A F  + GPE+++   GESE+N+R+ F++A +++P ++F DE+DSIA +        
Sbjct:   279 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEV 338

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    ++QLLT MDGM A+  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R
Sbjct:   339 ERRV---VSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGR 395

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERE 527
             L+I +   +   +  DVDL  +A  T G+ G+D+  +C  A    IRE ++  D++ +
Sbjct:   396 LEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDED 453

 Score = 37 (18.1 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
 Identities = 23/108 (21%), Positives = 46/108 (42%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKK 68
             D+   KR+ +   +ER+     L + + +   ++VVV+             D  L +  +
Sbjct:   325 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSI----DPALRRFGR 380

Query:    69 RKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYG 116
                 V I + D T    ++ + ++   N++  LGD V + Q A   +G
Sbjct:   381 FDREVDIGIPDPT---GRLEILQIHTKNMK--LGDDVDLEQIAAETHG 423


>ASPGD|ASPL0000069340 [details] [associations]
            symbol:AN7254 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEP]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0030970 "retrograde protein transport, ER to cytosol"
            evidence=IEA] [GO:0031134 "sister chromatid biorientation"
            evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
            segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:1900182 "positive regulation of protein
            localization to nucleus" evidence=IEA] [GO:0071630
            "nucleus-associated proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0071712 "ER-associated
            misfolded protein catabolic process" evidence=IEA] [GO:0051228
            "mitotic spindle disassembly" evidence=IEA] [GO:0016320
            "endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
            "piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
            "mitochondria-associated protein catabolic process" evidence=IEA]
            [GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
            endoplasmic reticulum localization involved in endoplasmic
            reticulum polarization at cell division site" evidence=IEA]
            [GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
            AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
            AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
            STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
            OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
        Length = 823

 Score = 1234 (439.4 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
 Identities = 245/392 (62%), Positives = 304/392 (77%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             +DV  +  IA +THGYVG+DLA+LC+EAA+Q IREKMD+IDL+++TIDAE+L+S+ VT E
Sbjct:   413 EDVD-LETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471

Query:   268 HFKTALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 326
             +F+ ALG SNPSALRE  VVEVPNV WEDIGGLE VKREL E+VQYPV+HPEKF+KFG+S
Sbjct:   472 NFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLS 531

Query:   327 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 386
             PS+GVLFYGPPG GKT+LAKA+ANEC ANFISVKGPELL+MWFGESE+N+R+IFDKAR +
Sbjct:   532 PSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAA 591

Query:   387 APCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             APCV+F DELDSIA                 +NQLLTEMDGM++KK VF+IGATNRP+ +
Sbjct:   592 APCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQL 651

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             D AL+RPGRLD L+Y+PLPD+ SR  I KA LRK+PV+ DVD+  +A  T GFSGAD+  
Sbjct:   652 DAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGF 711

Query:   507 ICQRACKYAIRENIEKDIERERRRS---ENPXXXXXXXXXXXX-XIKAVHFEESMKYARR 562
             + QRA K AI+E+I  +IER+++R    E+               +   HFEE+MK ARR
Sbjct:   712 VTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTARR 771

Query:   563 SVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             SVSD +IR+Y+AFAQ+L+ S G  S FRFP A
Sbjct:   772 SVSDVEIRRYEAFAQSLKNSGG-SSFFRFPSA 802

 Score = 695 (249.7 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
 Identities = 127/212 (59%), Positives = 166/212 (78%)

Query:     9 DAKGTKR----DFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
             DA G ++    D STAIL++KK PN L+V +A+NDDNS + L  +TM+ L  FRGDT+ +
Sbjct:    21 DASGAEKKEELDTSTAILKKKKKPNSLIVTDAVNDDNSTISLSNNTMDTLGLFRGDTVTV 80

Query:    65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
             +GKKRK+TV I LADD  ++   R+N+VVR NLRV+ GD+++VH C D+KY KR+ +LP+
Sbjct:    81 RGKKRKETVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPI 140

Query:   125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
              DT+EG+TG+LFD YL PYF + YRPV++GDLF VRGGMR VEFKV+E DPPE+ +VAPD
Sbjct:   141 ADTVEGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPD 200

Query:   185 TEIFCEGEPVRREDE-NRLDEVGYDDVGGVRK 215
             T I  EGEP++REDE N L+EVGYDD+GG RK
Sbjct:   201 TIIHSEGEPIQREDEENNLNEVGYDDIGGCRK 232

 Score = 501 (181.4 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
 Identities = 95/238 (39%), Positives = 149/238 (62%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++DIGG      +++E V+ P+ HP+ F+  G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct:   222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A F  + GPE+++   GESE+N+R+ F++A +++P ++F DE+DSIA +        
Sbjct:   282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEV 341

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    ++QLLT MDGM A+  V ++ ATNRP+ IDPAL R GR D+ + I +PD   R
Sbjct:   342 ERRV---VSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGR 398

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERE 527
             L+I     +   + +DVDL  +A  T G+ G+D+  +C  A    IRE ++  D++ +
Sbjct:   399 LEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDED 456


>POMBASE|SPAC1565.08 [details] [associations]
            symbol:cdc48 "AAA family ATPase Cdc48" species:4896
            "Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
            "endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
            evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
            [GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
            [GO:0030970 "retrograde protein transport, ER to cytosol"
            evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
            segregation" evidence=IGI] [GO:0033554 "cellular response to
            stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
            complex" evidence=ISO] [GO:0051230 "spindle disassembly"
            evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
            localization involved in endoplasmic reticulum polarization at cell
            division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
            GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
            GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
            eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
            InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
            SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
            OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
            SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
            EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
            OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
            GO:GO:0051230 Uniprot:Q9P3A7
        Length = 815

 Score = 1246 (443.7 bits), Expect = 3.7e-196, Sum P(2) = 3.7e-196
 Identities = 246/388 (63%), Positives = 306/388 (78%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + +IA +THGYVG+DLA+LC+EAA+Q IREKMD+IDL+++ IDAE+L+S+ VT +
Sbjct:   412 DDVD-LEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ ALG+SNPSALRETVVEVPNV WEDIGGLE VKREL+ETVQ PV + EKF +FG++P
Sbjct:   471 NFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTP 530

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+MWFGESE+NVR+IFDKAR +A
Sbjct:   531 SKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAA 590

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCV+F DELDSIA +               +NQLLTEMDG+++KK VF+IGATNRPD ID
Sbjct:   591 PCVVFLDELDSIA-KARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQID 649

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PAL+RPGRLDQLIY+PLPDEE+R  I +  LR +PV++DVDLRA+AK T GFSGAD+  +
Sbjct:   650 PALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFV 709

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXX-IKAVHFEESMKYARRSVSD 566
              QRA K AI+++IE+DI+RE    E P              ++  H EE+MK ARRSVSD
Sbjct:   710 VQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSD 769

Query:   567 ADIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             A++R+Y+A+A  L  SRG  + F+F  A
Sbjct:   770 AEVRRYEAYAHQLLTSRGL-TGFQFDSA 796

 Score = 676 (243.0 bits), Expect = 3.7e-196, Sum P(2) = 3.7e-196
 Identities = 123/201 (61%), Positives = 161/201 (80%)

Query:    16 DFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCI 75
             D +TAIL +K+ PN LVVD+A NDDNSV+ L  +TME LQ FRGDT+++KGK+RKDTV I
Sbjct:    31 DTATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLI 90

Query:    76 ALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNL 135
              L D+  E+   R+N+VVR+NLRVRLGD+V+++ C D+KY +R+ +LP+ DT+EG+TG+L
Sbjct:    91 VLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGLTGSL 150

Query:   136 FDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVR 195
             FD YLKPYF EAYRP+RKGDLF+VRG MR VEFKV++  P E+ +V+ DT I  EGEP+ 
Sbjct:   151 FDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIHWEGEPIN 210

Query:   196 REDE-NRLDEVGYDDVGGVRK 215
             REDE + L EVGYDD+GG R+
Sbjct:   211 REDEESSLAEVGYDDIGGCRR 231

 Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
 Identities = 121/391 (30%), Positives = 196/391 (50%)

Query:   153 KGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDE---NRLDEVGYDD 209
             +GD  +V+G  R     ++ TD      VA    +      VR  D    N   ++ Y +
Sbjct:    73 RGDTVVVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAE 132

Query:   210 VGGVRKIAKDTHGYVGADLAALCTEAALQCIR--EKMDVIDLEDETIDAEILNSMAVTDE 267
                V  +A    G  G+          ++  R   K D+  +       E        DE
Sbjct:   133 RISVLPLADTVEGLTGSLFDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDE 192

Query:   268 HFKTALGT-----SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEK 322
                 +  T       P    +    +  V ++DIGG      +++E V+ P+ HP+ F+ 
Sbjct:   193 FGIVSQDTIIHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKS 252

Query:   323 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDK 382
              G+ P +G+L YGPPG GKTL+A+A+ANE  A F  + GPE+++   GESE+N+R+ F++
Sbjct:   253 IGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEE 312

Query:   383 ARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNR 442
             A +++P ++F DE+DSIA +               ++QLLT MDGM A+  V ++ ATNR
Sbjct:   313 AEKNSPAIIFIDEIDSIAPKREKTNGEVERRV---VSQLLTLMDGMKARSNVVVMAATNR 369

Query:   443 PDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGA 502
             P+ IDPAL R GR D+ + + +PD   RL+I +   +   ++ DVDL  +A  T G+ G+
Sbjct:   370 PNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGS 429

Query:   503 DITEICQRACKYAIRENIEK-DIERERRRSE 532
             D+  +C  A    IRE ++  D++ +   +E
Sbjct:   430 DLASLCSEAAMQQIREKMDMIDLDEDEIDAE 460

 Score = 39 (18.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
 Identities = 6/24 (25%), Positives = 15/24 (62%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             RE    +  V ++D+GG+ ++ ++
Sbjct:   485 RETVVEVPNVRWEDIGGLEEVKRE 508


>CGD|CAL0000732 [details] [associations]
            symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
            AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
            ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
            cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
            evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
            segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:1900182 "positive regulation of protein
            localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
            misfolded protein catabolic process" evidence=IEA] [GO:0071630
            "nucleus-associated proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
            disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
            membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
            microautophagy of nucleus" evidence=IEA] [GO:0072671
            "mitochondria-associated protein catabolic process" evidence=IEA]
            [GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
            endoplasmic reticulum localization involved in endoplasmic
            reticulum polarization at cell division site" evidence=IEA]
            [GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
            surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
            GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
            ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
            GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
            Uniprot:Q59WG3
        Length = 826

 Score = 1202 (428.2 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
 Identities = 236/397 (59%), Positives = 303/397 (76%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  +  IA +THG+VGAD+A+LC+EAA+Q IREKMD+IDLE+ETID E+LNS+ VT +
Sbjct:   403 DDVD-LEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQD 461

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ ALG SNPSALRETVVE  NV W+DIGGL+N+K EL+ETV+YPV HP++++KFG++P
Sbjct:   462 NFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAP 521

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             +KGVLF+GPPG GKTLLAKA+A E  ANFISVKGPELL+MW+GESE+N+R+IFDKAR +A
Sbjct:   522 TKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 581

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P V+F DELDSIA                 +NQLLTEMDGM+AKK VF+IGATNRPD ID
Sbjct:   582 PTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 641

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PALLRPGRLDQLIY+PLPDE +RL I +A LR +P+   +DL  +AK T GFSGAD++ I
Sbjct:   642 PALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYI 701

Query:   508 CQRACKYAIRENIEKDI-------ERERRRSENPXXXXXXXXXXXXX--IKAVHFEESMK 558
              QR+ K+AI+++IE  +       E+E+ ++E+                I   HFEE+MK
Sbjct:   702 VQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMK 761

Query:   559 YARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAA 595
              A+RSVSDA++R+Y+++AQ LQ SRG  S FRF + A
Sbjct:   762 TAKRSVSDAELRRYESYAQQLQASRGQFSSFRFNENA 798

 Score = 716 (257.1 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
 Identities = 134/211 (63%), Positives = 162/211 (76%)

Query:     6 ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIK 65
             ++S A       +TAIL RKK  N LVVD+A NDDNSV+ +  +TME LQ FRGDT+L+K
Sbjct:    12 DASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71

Query:    66 GKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
             GKKRKDTV I LADD   +   R+N+ VR+NLRVRLGD+V+VH C D+KY  R+ +LP+ 
Sbjct:    72 GKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIA 131

Query:   126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDT 185
             DT+EG+ G+LFD YLKPYF EAYRPVRKGDLF VRGGMR VEFKV+E DP E  +VA DT
Sbjct:   132 DTVEGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDT 191

Query:   186 EIFCEGEPVRREDE-NRLDEVGYDDVGGVRK 215
              I CEGEP+ REDE N L+EVGYDD+GG +K
Sbjct:   192 IIHCEGEPINREDEENSLNEVGYDDIGGCKK 222

 Score = 530 (191.6 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
 Identities = 103/238 (43%), Positives = 153/238 (64%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++DIGG +    +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKT++A+A+AN
Sbjct:   212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A F  + GPE+++   GESE+N+R+ F++A +++P ++F DE+DSIA +        
Sbjct:   272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEV 331

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    ++QLLT MDGM A+  V +I ATNRP+ IDPAL R GR D+ + I +PD E R
Sbjct:   332 ERRV---VSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERE 527
             L+I +   +   ++ DVDL A+A  T GF GADI  +C  A    IRE ++  D+E E
Sbjct:   389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEE 446

 Score = 39 (18.8 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KRD +   +ER+     L + + +   ++VVV+
Sbjct:   318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVI 355


>UNIPROTKB|Q59WG3 [details] [associations]
            symbol:CDC48 "Putative uncharacterized protein CDC48"
            species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
            GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
            ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
            GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
            Uniprot:Q59WG3
        Length = 826

 Score = 1202 (428.2 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
 Identities = 236/397 (59%), Positives = 303/397 (76%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  +  IA +THG+VGAD+A+LC+EAA+Q IREKMD+IDLE+ETID E+LNS+ VT +
Sbjct:   403 DDVD-LEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQD 461

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ ALG SNPSALRETVVE  NV W+DIGGL+N+K EL+ETV+YPV HP++++KFG++P
Sbjct:   462 NFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAP 521

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             +KGVLF+GPPG GKTLLAKA+A E  ANFISVKGPELL+MW+GESE+N+R+IFDKAR +A
Sbjct:   522 TKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 581

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P V+F DELDSIA                 +NQLLTEMDGM+AKK VF+IGATNRPD ID
Sbjct:   582 PTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 641

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PALLRPGRLDQLIY+PLPDE +RL I +A LR +P+   +DL  +AK T GFSGAD++ I
Sbjct:   642 PALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYI 701

Query:   508 CQRACKYAIRENIEKDI-------ERERRRSENPXXXXXXXXXXXXX--IKAVHFEESMK 558
              QR+ K+AI+++IE  +       E+E+ ++E+                I   HFEE+MK
Sbjct:   702 VQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMK 761

Query:   559 YARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAA 595
              A+RSVSDA++R+Y+++AQ LQ SRG  S FRF + A
Sbjct:   762 TAKRSVSDAELRRYESYAQQLQASRGQFSSFRFNENA 798

 Score = 716 (257.1 bits), Expect = 9.8e-196, Sum P(2) = 9.8e-196
 Identities = 134/211 (63%), Positives = 162/211 (76%)

Query:     6 ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIK 65
             ++S A       +TAIL RKK  N LVVD+A NDDNSV+ +  +TME LQ FRGDT+L+K
Sbjct:    12 DASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71

Query:    66 GKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
             GKKRKDTV I LADD   +   R+N+ VR+NLRVRLGD+V+VH C D+KY  R+ +LP+ 
Sbjct:    72 GKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIA 131

Query:   126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDT 185
             DT+EG+ G+LFD YLKPYF EAYRPVRKGDLF VRGGMR VEFKV+E DP E  +VA DT
Sbjct:   132 DTVEGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDT 191

Query:   186 EIFCEGEPVRREDE-NRLDEVGYDDVGGVRK 215
              I CEGEP+ REDE N L+EVGYDD+GG +K
Sbjct:   192 IIHCEGEPINREDEENSLNEVGYDDIGGCKK 222

 Score = 530 (191.6 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
 Identities = 103/238 (43%), Positives = 153/238 (64%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++DIGG +    +++E V+ P+ HP+ F+  G+ P KG+L YGPPG GKT++A+A+AN
Sbjct:   212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A F  + GPE+++   GESE+N+R+ F++A +++P ++F DE+DSIA +        
Sbjct:   272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEV 331

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    ++QLLT MDGM A+  V +I ATNRP+ IDPAL R GR D+ + I +PD E R
Sbjct:   332 ERRV---VSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERE 527
             L+I +   +   ++ DVDL A+A  T GF GADI  +C  A    IRE ++  D+E E
Sbjct:   389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEE 446

 Score = 39 (18.8 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KRD +   +ER+     L + + +   ++VVV+
Sbjct:   318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVI 355


>SGD|S000002284 [details] [associations]
            symbol:CDC48 "AAA ATPase involved in multiple processes"
            species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
            evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
            evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
            evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
            "cell cycle" evidence=IEA] [GO:0015031 "protein transport"
            evidence=IEA] [GO:0043231 "intracellular membrane-bounded
            organelle" evidence=IEA] [GO:1900182 "positive regulation of
            protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
            spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
            reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
            evidence=IMP] [GO:0071712 "ER-associated misfolded protein
            catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
            transport, ER to cytosol" evidence=IMP] [GO:0034098
            "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
            [GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
            [GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
            protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
            microautophagy of nucleus" evidence=IMP] [GO:0016236
            "macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
            biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0072671 "mitochondria-associated protein
            catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
            EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
            GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
            EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
            ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
            MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
            PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
            KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
            OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
            GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
            GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
            Uniprot:P25694
        Length = 835

 Score = 1175 (418.7 bits), Expect = 9.0e-193, Sum P(2) = 9.0e-193
 Identities = 234/399 (58%), Positives = 297/399 (74%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  +  +A +THGYVGAD+A+LC+EAA+Q IREKMD+IDL+++ IDAE+L+S+ VT +
Sbjct:   402 DDVD-LEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMD 460

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             +F+ ALG SNPSALRETVVE  NV W+D+GGL+ +K EL+ETV+YPV HP+++ KFG+SP
Sbjct:   461 NFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSP 520

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPG GKTLLAKA+A E  ANFISVKGPELL+MW+GESE+N+R+IFDKAR +A
Sbjct:   521 SKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA 580

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P V+F DELDSIA                 +NQLLTEMDGM+AKK VF+IGATNRPD ID
Sbjct:   581 PTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQID 640

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIY+PLPDE +RL I  A LRK+P+   ++L A+AK TQGFSGAD+  I
Sbjct:   641 PAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYI 700

Query:   508 CQRACKYAIRENIE--------KDIERE----RRRSENPXXXXXXXXXXXXXIKAVHFEE 555
              QRA KYAI+++IE        K+++ E        E               I   HF E
Sbjct:   701 VQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAE 760

Query:   556 SMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDA 594
             +MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F DA
Sbjct:   761 AMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNFNDA 799

 Score = 715 (256.8 bits), Expect = 9.0e-193, Sum P(2) = 9.0e-193
 Identities = 130/199 (65%), Positives = 163/199 (81%)

Query:    18 STAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIAL 77
             +TAIL RKK  N L+VD+AINDDNSV+ ++ +TM+KL+ FRGDT+L+KGKKRKDTV I L
Sbjct:    23 ATAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVL 82

Query:    78 ADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFD 137
              DD  E+   R+N+VVR+NLR+RLGD+V++H C D+KY  R+ +LP+ DTIEG+TGNLFD
Sbjct:    83 IDDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFD 142

Query:   138 AYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRE 197
              +LKPYF EAYRPVRKGD F+VRGGMR VEFKV++ +P EY VVA DT I  EGEP+ RE
Sbjct:   143 VFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINRE 202

Query:   198 DE-NRLDEVGYDDVGGVRK 215
             DE N ++EVGYDD+GG RK
Sbjct:   203 DEENNMNEVGYDDIGGCRK 221

 Score = 518 (187.4 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
 Identities = 102/243 (41%), Positives = 153/243 (62%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++DIGG      +++E V+ P+ HP+ F+  G+ P +GVL YGPPG GKTL+A+A+AN
Sbjct:   211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A F  + GPE+++   GESE+N+R+ F++A ++AP ++F DE+DSIA +        
Sbjct:   271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEV 330

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    ++QLLT MDGM A+  V +I ATNRP+ IDPAL R GR D+ + I +PD   R
Sbjct:   331 ERRV---VSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 387

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERERR 529
             L++ +   +   ++ DVDL ALA  T G+ GADI  +C  A    IRE ++  D++ +  
Sbjct:   388 LEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447

Query:   530 RSE 532
              +E
Sbjct:   448 DAE 450

 Score = 39 (18.8 bits), Expect = 2.5e-121, Sum P(2) = 2.5e-121
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KRD +   +ER+     L + + +   ++VVV+
Sbjct:   317 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVI 354

 Score = 38 (18.4 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query:   205 VGYDDVGGVRKIAKD 219
             V +DDVGG+ +I ++
Sbjct:   484 VTWDDVGGLDEIKEE 498


>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
            symbol:PFF0940c "cell division cycle protein 48
            homologue, putative" species:5833 "Plasmodium falciparum"
            [GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
            "ATPase activity" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
            ProteinModelPortal:C6KT34 PRIDE:C6KT34
            EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
            EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
            Uniprot:C6KT34
        Length = 828

 Score = 1141 (406.7 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 220/361 (60%), Positives = 268/361 (74%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTA 272
             + ++A +THG+VGADLA LCTEAAL CIREKMDVIDLEDE ID E+L SM VT +HF  A
Sbjct:   399 LEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMA 458

Query:   273 LGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 332
             LGT NPS+LRETVVEVPNV W+DIGGL+ VK  L+E + YP++HP+KFEKFGMSPS+GVL
Sbjct:   459 LGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVL 518

Query:   333 FYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLF 392
             FYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGESEANVRE+FDKAR +APCVLF
Sbjct:   519 FYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLF 578

Query:   393 FDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLR 452
             FDELDSI TQ               +NQLLTE+DG+  KK +F IGATNRP+++D ALLR
Sbjct:   579 FDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLR 638

Query:   453 PGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRAC 512
             PGRLDQLIYIPLPD  +R+ I  A LRK PV+++V +  LA+ T GFSGAD+ E+CQRA 
Sbjct:   639 PGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAA 698

Query:   513 KYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKY 572
             + AIR+ I  D E   ++S+                  VH +   +   +  +D D  KY
Sbjct:   699 RAAIRDAI--DAEEMNKKSKLELSNKKENEQNETNENDVHNKTEQQANDQQKNDDDNIKY 756

Query:   573 Q 573
             +
Sbjct:   757 E 757

 Score = 664 (238.8 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 119/193 (61%), Positives = 156/193 (80%)

Query:    24 RKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCE 83
             +KK  +RL+V+EA NDDNSVV L+   ME+L FFRGDTI+IKGKKR  T+CI L D+  +
Sbjct:    22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81

Query:    84 EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN-LFDAYLKP 142
             E KIR+NKV R NLRV LGDVV V  C ++ YGK++ +LP+DDTIEG+  + LF+ +LKP
Sbjct:    82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141

Query:   143 YFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRL 202
             YF E+YRPV+KGDLFLVRGG  SVEFKV+E DP ++C+V+PDT I+ EG+P++R+DE +L
Sbjct:   142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201

Query:   203 DEVGYDDVGGVRK 215
             DE+GYDD+GG +K
Sbjct:   202 DEIGYDDIGGCKK 214

 Score = 485 (175.8 bits), Expect = 3.1e-120, Sum P(3) = 3.1e-120
 Identities = 97/247 (39%), Positives = 151/247 (61%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R+   ++  + ++DIGG +    +++E ++ P+ HP  F+  G+ P +GVL YGPPG GK
Sbjct:   195 RDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGK 254

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             T +A+A+ANE  A F  + GPE+++   GE+EAN+R  F++A +++P ++F DE+DSIA 
Sbjct:   255 TCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAP 314

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               ++QLLT MDG+ ++  V +I ATNR + IDPAL R GR D+ I 
Sbjct:   315 KREKTNGEVERRV---VSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREID 371

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             I +PD+  R +I +   +   +S DV L  LA  T GF GAD+ ++C  A    IRE ++
Sbjct:   372 IGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMD 431

Query:   522 K-DIERE 527
               D+E E
Sbjct:   432 VIDLEDE 438

 Score = 69 (29.3 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query:   552 HFEESMKYARRSVSDADIRKYQAF 575
             HF+E +  ARRSVS AD+ KY  F
Sbjct:   762 HFKEGLAGARRSVSQADLIKYDNF 785

 Score = 39 (18.8 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKDT 220
             RE    +  V +DD+GG+ ++ K T
Sbjct:   468 RETVVEVPNVKWDDIGGLDEV-KST 491

 Score = 38 (18.4 bits), Expect = 2.2e-123, Sum P(3) = 2.2e-123
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KR+ +   +ER+     L + + I     VVV+
Sbjct:   310 DSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVI 347


>UNIPROTKB|C6KT34 [details] [associations]
            symbol:PFF0940c "Cell division cycle protein 48 homologue,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
            "regulation of cell cycle" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
            GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
            ProteinModelPortal:C6KT34 PRIDE:C6KT34
            EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
            EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
            Uniprot:C6KT34
        Length = 828

 Score = 1141 (406.7 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 220/361 (60%), Positives = 268/361 (74%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTA 272
             + ++A +THG+VGADLA LCTEAAL CIREKMDVIDLEDE ID E+L SM VT +HF  A
Sbjct:   399 LEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMA 458

Query:   273 LGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 332
             LGT NPS+LRETVVEVPNV W+DIGGL+ VK  L+E + YP++HP+KFEKFGMSPS+GVL
Sbjct:   459 LGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVL 518

Query:   333 FYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLF 392
             FYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGESEANVRE+FDKAR +APCVLF
Sbjct:   519 FYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLF 578

Query:   393 FDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLR 452
             FDELDSI TQ               +NQLLTE+DG+  KK +F IGATNRP+++D ALLR
Sbjct:   579 FDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLR 638

Query:   453 PGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRAC 512
             PGRLDQLIYIPLPD  +R+ I  A LRK PV+++V +  LA+ T GFSGAD+ E+CQRA 
Sbjct:   639 PGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAA 698

Query:   513 KYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKY 572
             + AIR+ I  D E   ++S+                  VH +   +   +  +D D  KY
Sbjct:   699 RAAIRDAI--DAEEMNKKSKLELSNKKENEQNETNENDVHNKTEQQANDQQKNDDDNIKY 756

Query:   573 Q 573
             +
Sbjct:   757 E 757

 Score = 664 (238.8 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 119/193 (61%), Positives = 156/193 (80%)

Query:    24 RKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCE 83
             +KK  +RL+V+EA NDDNSVV L+   ME+L FFRGDTI+IKGKKR  T+CI L D+  +
Sbjct:    22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81

Query:    84 EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN-LFDAYLKP 142
             E KIR+NKV R NLRV LGDVV V  C ++ YGK++ +LP+DDTIEG+  + LF+ +LKP
Sbjct:    82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141

Query:   143 YFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRL 202
             YF E+YRPV+KGDLFLVRGG  SVEFKV+E DP ++C+V+PDT I+ EG+P++R+DE +L
Sbjct:   142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201

Query:   203 DEVGYDDVGGVRK 215
             DE+GYDD+GG +K
Sbjct:   202 DEIGYDDIGGCKK 214

 Score = 485 (175.8 bits), Expect = 3.1e-120, Sum P(3) = 3.1e-120
 Identities = 97/247 (39%), Positives = 151/247 (61%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R+   ++  + ++DIGG +    +++E ++ P+ HP  F+  G+ P +GVL YGPPG GK
Sbjct:   195 RDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGK 254

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             T +A+A+ANE  A F  + GPE+++   GE+EAN+R  F++A +++P ++F DE+DSIA 
Sbjct:   255 TCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAP 314

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               ++QLLT MDG+ ++  V +I ATNR + IDPAL R GR D+ I 
Sbjct:   315 KREKTNGEVERRV---VSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREID 371

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             I +PD+  R +I +   +   +S DV L  LA  T GF GAD+ ++C  A    IRE ++
Sbjct:   372 IGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMD 431

Query:   522 K-DIERE 527
               D+E E
Sbjct:   432 VIDLEDE 438

 Score = 69 (29.3 bits), Expect = 2.3e-189, Sum P(3) = 2.3e-189
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query:   552 HFEESMKYARRSVSDADIRKYQAF 575
             HF+E +  ARRSVS AD+ KY  F
Sbjct:   762 HFKEGLAGARRSVSQADLIKYDNF 785

 Score = 39 (18.8 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKDT 220
             RE    +  V +DD+GG+ ++ K T
Sbjct:   468 RETVVEVPNVKWDDIGGLDEV-KST 491

 Score = 38 (18.4 bits), Expect = 2.2e-123, Sum P(3) = 2.2e-123
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KR+ +   +ER+     L + + I     VVV+
Sbjct:   310 DSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVI 347


>UNIPROTKB|H9KYT1 [details] [associations]
            symbol:LOC430766 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
            PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
            EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
            Uniprot:H9KYT1
        Length = 538

 Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
 Identities = 288/385 (74%), Positives = 320/385 (83%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE 267
             DDV  + ++  +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT +
Sbjct:   124 DDVD-LEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 182

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              F+ AL  SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+P
Sbjct:   183 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTP 242

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             SKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+A
Sbjct:   243 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 302

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PCVLFFDELDSIA                 +NQ+LTEMDGMS KK VFIIGATNRPDIID
Sbjct:   303 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIID 362

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PA+LRPGRLDQLIYIPLPDE+SR+ I KA LRKSPV+KDVDL  LAK T GFSGAD+TEI
Sbjct:   363 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEI 422

Query:   508 CQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDA 567
             CQRACK AIRE+IE +I RER R  NP             I+  HFEE+M++ARRSVSD 
Sbjct:   423 CQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDN 482

Query:   568 DIRKYQAFAQTLQQSRGFGSEFRFP 592
             DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct:   483 DIRKYEMFAQTLQQSRGFGS-FRFP 506

 Score = 305 (112.4 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 65/168 (38%), Positives = 101/168 (60%)

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             GPE+++   GESE+N+R+ F++A ++AP ++F DELD+IA +               ++Q
Sbjct:     3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI---VSQ 59

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             LLT MDG+  +  V ++ ATNRP+ IDPAL R GR D+ + I +PD   RL+I +   + 
Sbjct:    60 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 119

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIERE 527
               ++ DVDL  +   T G  GAD+  +C  A   AIR+ ++  D+E E
Sbjct:   120 MKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 167


>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
            symbol:PF07_0047 "cell division cycle ATPase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
            GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
            SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
            ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
            PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
            KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
        Length = 1229

 Score = 909 (325.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
 Identities = 175/342 (51%), Positives = 237/342 (69%)

Query:   245 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 304
             D +D  +  I A ILN + +  +HF+ AL   NPS+LRE  V++P V W DIGG+  VK 
Sbjct:   885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944

Query:   305 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 364
             +L+ET+ YP+E+   + KF  + +KG+L YGPPGCGKTLLAKAIANEC+ANFISVKGPEL
Sbjct:   945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004

Query:   365 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 424
             LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +               +NQ+LTE
Sbjct:  1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRV--INQILTE 1062

Query:   425 MDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVS 484
             +DG++ KKT+FII ATNRPDI+D AL RPGRLD+LIYI LPD +SR  IFKA L+ +P++
Sbjct:  1063 IDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLN 1122

Query:   485 KDVDLRALAKYTQGFSGADITEICQRACKYAIRENI------EKDIERERRRSENPXXXX 538
             +DVD+  +AK T+GFSGADIT +CQ A   AI+E I      +K+ E +R++++N     
Sbjct:  1123 EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKID 1182

Query:   539 XXXXXXXX-XIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
                       +   HF+ + K AR S+   D+ KY+ F + L
Sbjct:  1183 DTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224

 Score = 493 (178.6 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
 Identities = 98/239 (41%), Positives = 148/239 (61%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             ++ +ED+GG++    +++E ++ P+++PE F   G+S  KGVL +G PG GKT +AKAIA
Sbjct:   523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             NE  A    + GPE+++   GESE  +R+IF KA +  PC++F DE+DSIA +       
Sbjct:   583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     ++QLLT MDG+     V ++ ATNRP+ IDPAL R GR D+ I IP+PDE+ 
Sbjct:   643 LEKRV---VSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQG 699

Query:   470 RLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE-KDIERE 527
             R +I     +K  +  DV+LR +AK   G+ GAD+ ++C  A    I+E+I   D++ E
Sbjct:   700 RYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE 758

 Score = 228 (85.3 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
 Identities = 56/221 (25%), Positives = 112/221 (50%)

Query:     3 NQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAI-NDDNSVVVLHPDTMEKLQFFRGDT 61
             N+         + +F    L+  K P   +V+    N DN  + +  + M++L    G T
Sbjct:   314 NEKTQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGAT 373

Query:    62 ILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHI 121
             +L+KGKK+++ + IA  D + ++  + ++  ++ NLR+   D++ +H   + K  + V +
Sbjct:   374 VLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVL 433

Query:   122 LPVDDTIEGVTGN-LFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVI-----ETDP 175
              P  DTI  ++   L  A + PY   +Y+P+R      +      +EFKV+     E++ 
Sbjct:   434 SPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESEN 493

Query:   176 PEYCVVAPDTEIFCEGEPVRRED-ENRLDEVGYDDVGGVRK 215
              E+  +   +++    E ++RED E   D++ Y+D+GG++K
Sbjct:   494 EEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKK 534

 Score = 147 (56.8 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query:   209 DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEH 268
             DV  +RKIAK+ HGYVGADLA LC EAA+QCI+E +  +DL++E    + +  M ++ + 
Sbjct:   716 DVN-LRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE----DFIEFMKISVDE 770

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPV 314
              K  +G + P     T     N N+  I  L     +L  T  +P+
Sbjct:   771 DKKNMG-NEPYGSSHT----NNSNY--INHLTESSNKLSYTNMFPL 809

 Score = 74 (31.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL---EDETIDAEILNSMAV 264
             +DV  +  +AK T G+ GAD+  LC  A  + I+E + ++++   E E    +  NS  +
Sbjct:  1123 EDVD-IHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKI 1181

Query:   265 TD 266
              D
Sbjct:  1182 DD 1183

 Score = 44 (20.5 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KR  S   LE++     L + + +  +N+V+VL
Sbjct:   630 DSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVL 667

 Score = 39 (18.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
 Identities = 6/21 (28%), Positives = 15/21 (71%)

Query:   196 REDENRLDEVGYDDVGGVRKI 216
             RE + ++  V ++D+GG+ ++
Sbjct:   922 RERQVQIPTVTWNDIGGMNEV 942


>UNIPROTKB|P46468 [details] [associations]
            symbol:PF07_0047 "Putative cell division cycle ATPase"
            species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
            catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
            GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
            EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
            IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
            EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
            EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
        Length = 1229

 Score = 909 (325.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
 Identities = 175/342 (51%), Positives = 237/342 (69%)

Query:   245 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 304
             D +D  +  I A ILN + +  +HF+ AL   NPS+LRE  V++P V W DIGG+  VK 
Sbjct:   885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944

Query:   305 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 364
             +L+ET+ YP+E+   + KF  + +KG+L YGPPGCGKTLLAKAIANEC+ANFISVKGPEL
Sbjct:   945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004

Query:   365 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 424
             LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +               +NQ+LTE
Sbjct:  1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRV--INQILTE 1062

Query:   425 MDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVS 484
             +DG++ KKT+FII ATNRPDI+D AL RPGRLD+LIYI LPD +SR  IFKA L+ +P++
Sbjct:  1063 IDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLN 1122

Query:   485 KDVDLRALAKYTQGFSGADITEICQRACKYAIRENI------EKDIERERRRSENPXXXX 538
             +DVD+  +AK T+GFSGADIT +CQ A   AI+E I      +K+ E +R++++N     
Sbjct:  1123 EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKID 1182

Query:   539 XXXXXXXX-XIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
                       +   HF+ + K AR S+   D+ KY+ F + L
Sbjct:  1183 DTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224

 Score = 493 (178.6 bits), Expect = 7.0e-67, Sum P(2) = 7.0e-67
 Identities = 98/239 (41%), Positives = 148/239 (61%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             ++ +ED+GG++    +++E ++ P+++PE F   G+S  KGVL +G PG GKT +AKAIA
Sbjct:   523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             NE  A    + GPE+++   GESE  +R+IF KA +  PC++F DE+DSIA +       
Sbjct:   583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     ++QLLT MDG+     V ++ ATNRP+ IDPAL R GR D+ I IP+PDE+ 
Sbjct:   643 LEKRV---VSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQG 699

Query:   470 RLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE-KDIERE 527
             R +I     +K  +  DV+LR +AK   G+ GAD+ ++C  A    I+E+I   D++ E
Sbjct:   700 RYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE 758

 Score = 228 (85.3 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
 Identities = 56/221 (25%), Positives = 112/221 (50%)

Query:     3 NQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAI-NDDNSVVVLHPDTMEKLQFFRGDT 61
             N+         + +F    L+  K P   +V+    N DN  + +  + M++L    G T
Sbjct:   314 NEKTQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGAT 373

Query:    62 ILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHI 121
             +L+KGKK+++ + IA  D + ++  + ++  ++ NLR+   D++ +H   + K  + V +
Sbjct:   374 VLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVL 433

Query:   122 LPVDDTIEGVTGN-LFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVI-----ETDP 175
              P  DTI  ++   L  A + PY   +Y+P+R      +      +EFKV+     E++ 
Sbjct:   434 SPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESEN 493

Query:   176 PEYCVVAPDTEIFCEGEPVRRED-ENRLDEVGYDDVGGVRK 215
              E+  +   +++    E ++RED E   D++ Y+D+GG++K
Sbjct:   494 EEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKK 534

 Score = 147 (56.8 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query:   209 DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEH 268
             DV  +RKIAK+ HGYVGADLA LC EAA+QCI+E +  +DL++E    + +  M ++ + 
Sbjct:   716 DVN-LRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE----DFIEFMKISVDE 770

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPV 314
              K  +G + P     T     N N+  I  L     +L  T  +P+
Sbjct:   771 DKKNMG-NEPYGSSHT----NNSNY--INHLTESSNKLSYTNMFPL 809

 Score = 74 (31.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL---EDETIDAEILNSMAV 264
             +DV  +  +AK T G+ GAD+  LC  A  + I+E + ++++   E E    +  NS  +
Sbjct:  1123 EDVD-IHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKI 1181

Query:   265 TD 266
              D
Sbjct:  1182 DD 1183

 Score = 44 (20.5 bits), Expect = 8.9e-94, Sum P(2) = 8.9e-94
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query:     9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
             D+   KR  S   LE++     L + + +  +N+V+VL
Sbjct:   630 DSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVL 667

 Score = 39 (18.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
 Identities = 6/21 (28%), Positives = 15/21 (71%)

Query:   196 REDENRLDEVGYDDVGGVRKI 216
             RE + ++  V ++D+GG+ ++
Sbjct:   922 RERQVQIPTVTWNDIGGMNEV 942


>UNIPROTKB|E2RC37 [details] [associations]
            symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
            GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
            EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
            Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
            Uniprot:E2RC37
        Length = 893

 Score = 749 (268.7 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
 Identities = 143/307 (46%), Positives = 201/307 (65%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A   HGYVGADL ALC EA L  +R    V++ +    D+++   + +T   F   + 
Sbjct:   551 QLANSAHGYVGADLKALCNEAGLYALRR---VLNKQPNLSDSKMAGLVKITLNDFLQGMN 607

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  ++VPNV+W DIGGLEN+K +L++ V++P++HPE F + G+ P KGVL Y
Sbjct:   608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLY 667

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VREIF KAR  +P ++FFD
Sbjct:   668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFD 727

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPG 454
             ELD++A +               L QLLTEMDG+   K V I+ ATNRPD ID AL+RPG
Sbjct:   728 ELDALAIERGSSSGAGNVADRV-LAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPG 786

Query:   455 RLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKY 514
             R+D++IY+PLPD  +R +I        P+S DV+L  L   T  +SGA+I  +C+ A   
Sbjct:   787 RIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALL 846

Query:   515 AIRENIE 521
             A+ E+I+
Sbjct:   847 ALEEDIQ 853

 Score = 436 (158.5 bits), Expect = 5.2e-45, Sum P(3) = 5.2e-45
 Identities = 89/236 (37%), Positives = 143/236 (60%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++ IGGL +  + ++E ++ P++ PE F+ +G+ P +GVL YGPPG GKT++A+A+AN
Sbjct:   350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A    + GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +        
Sbjct:   410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 469

Query:   411 XXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 467
                    L   LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P+ 
Sbjct:   470 EKRVVASL---LTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query:   468 ESRLQIFKACLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
               RL I +  L++ P +  +V+L  LA    G+ GAD+  +C  A  YA+R  + K
Sbjct:   527 ADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNK 582

 Score = 55 (24.4 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
 Identities = 19/81 (23%), Positives = 37/81 (45%)

Query:    29 NRLVVDEAIND--DNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPK 86
             N L +D+ +     N +V L  +TM+      G  +L+     K  V  A         K
Sbjct:    50 NFLEMDDKVPKTFQNFLVQLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGK 109

Query:    87 IRMNKVVRSNLRVRLGDVVSV 107
             + ++++ + N+ V++GD + V
Sbjct:   110 VGLSEMAQKNVGVKVGDAIQV 130

 Score = 37 (18.1 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   197 EDENRLDEVGYDDVGGV 213
             E+E+   +V YD +GG+
Sbjct:   342 EEEDNQFKVTYDMIGGL 358


>MGI|MGI:1927170 [details] [associations]
            symbol:Spata5 "spermatogenesis associated 5" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
            GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
            eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
            GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
            CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
            EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
            EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
            RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
            SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
            Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
            KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
            Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
        Length = 893

 Score = 767 (275.1 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
 Identities = 145/314 (46%), Positives = 204/314 (64%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A + HGYVGADL ALC EA L  +R    V+  +    D+++   + +T   F   + 
Sbjct:   551 RLANNAHGYVGADLKALCNEAGLHALRR---VLRKQPNLPDSKVAGMVKITLNDFLQGMN 607

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  ++VPNV+W DIGGLEN+K +L++ V++P++HP+ F + G+ P KGVL Y
Sbjct:   608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLY 667

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VREIF KAR  AP ++FFD
Sbjct:   668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 727

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPG 454
             ELD++A +               L QLLTEMDG+   K V ++ ATNRPD ID AL+RPG
Sbjct:   728 ELDALAVERGSSSGAGNVADRV-LAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPG 786

Query:   455 RLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKY 514
             R+D++IY+PLPD  +R +I        P+S +VDL  L   T  +SGA+I  +C+ A   
Sbjct:   787 RIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALL 846

Query:   515 AIRENIEKDIERER 528
             A+ ENI+ D   +R
Sbjct:   847 ALEENIKADCIMKR 860

 Score = 423 (154.0 bits), Expect = 8.5e-42, Sum P(2) = 8.5e-42
 Identities = 86/236 (36%), Positives = 141/236 (59%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++ IGGL +  + ++E ++ P++ PE F+ +G+   +G+L YGPPG GKT++A+A+AN
Sbjct:   350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A    + GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +        
Sbjct:   410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV 469

Query:   411 XXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 467
                    L   LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P+ 
Sbjct:   470 EKRVVASL---LTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNA 526

Query:   468 ESRLQIFKACLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             + RL I +  LR+ P +    +L  LA    G+ GAD+  +C  A  +A+R  + K
Sbjct:   527 QDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRK 582

 Score = 55 (24.4 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
 Identities = 17/67 (25%), Positives = 31/67 (46%)

Query:    41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVR 100
             NS+V L  +TM+      G  +L+     K  V  A         K+ ++++ + N+ VR
Sbjct:    64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVR 123

Query:   101 LGDVVSV 107
              G+ + V
Sbjct:   124 AGETIQV 130


>UNIPROTKB|Q8NB90 [details] [associations]
            symbol:SPATA5 "Spermatogenesis-associated protein 5"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
            GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
            HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
            EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
            EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
            IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
            UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
            IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
            PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
            GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
            CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
            HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
            HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
            PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
            CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
        Length = 893

 Score = 759 (272.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 145/314 (46%), Positives = 205/314 (65%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A   HGYVGADL  LC EA L  +R    ++  +    D ++   + +T + F  A+ 
Sbjct:   551 QLANSAHGYVGADLKVLCNEAGLCALRR---ILKKQPNLPDVKVAGLVKITLKDFLQAMN 607

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  ++VPNV+W DIGGLE++K +L++ V++P++HPE F + G+ P KGVL Y
Sbjct:   608 DIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLY 667

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VRE F KAR  AP ++FFD
Sbjct:   668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFD 727

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPG 454
             ELD++A +               L QLLTEMDG+   K V I+ ATNRPD ID AL+RPG
Sbjct:   728 ELDALAVERGSSLGAGNVADRV-LAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPG 786

Query:   455 RLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKY 514
             R+D++IY+PLPD  +R +IFK      PVS +VDL  L   T  +SGA+I  +C+ A   
Sbjct:   787 RIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALL 846

Query:   515 AIRENIEKDIERER 528
             A+ E+I+ ++  +R
Sbjct:   847 ALEEDIQANLIMKR 860

 Score = 424 (154.3 bits), Expect = 3.2e-42, Sum P(2) = 3.2e-42
 Identities = 106/347 (30%), Positives = 184/347 (53%)

Query:   184 DTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREK 243
             DT+I        +  ++R+     D +  V +   D  G +  ++  L  +   +  RE 
Sbjct:   242 DTQIPTSRSTPYKPIDDRITNKASDVLLDVTQSPGDGSGLMLEEVTGL--KCNFESAREG 299

Query:   244 MDVIDLEDETIDAEILNSMAVTDE-HFKTALGTSNPSALRETVVEVPN---VNWEDIGGL 299
              + +  E+  +   I  +   TD  +F ++    N + + +   E  N   V ++ IGGL
Sbjct:   300 NEQLTEEERLLKFSI-GAKCNTDTFYFISSTTRVNFTEIDKNSKEQDNQFKVTYDMIGGL 358

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
              +  + ++E ++ P++ PE F+ +G+   +GVL YGPPG GKT++A+A+ANE  A    +
Sbjct:   359 SSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVI 418

Query:   360 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 419
              GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +               L 
Sbjct:   419 NGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASL- 477

Query:   420 QLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKA 476
               LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P+ + RL I + 
Sbjct:   478 --LTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQK 535

Query:   477 CLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
              LR+ P +  + +L  LA    G+ GAD+  +C  A   A+R  ++K
Sbjct:   536 LLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKK 582

 Score = 58 (25.5 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 20/77 (25%), Positives = 35/77 (45%)

Query:    33 VDEAIND--DNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMN 90
             VD+ I     NS++ L  +TM+      G  +L+     K  V  A         K+ ++
Sbjct:    55 VDDKIPKTFQNSLIHLGLNTMKSANICIGRPVLLTSLNGKQEVYTAWPMAGFPGGKVGLS 114

Query:    91 KVVRSNLRVRLGDVVSV 107
             ++ + N+ VR GD + V
Sbjct:   115 EMAQKNVGVRPGDAIQV 131


>DICTYBASE|DDB_G0278435 [details] [associations]
            symbol:DDB_G0278435 "AAA ATPase domain-containing
            protein" species:44689 "Dictyostelium discoideum" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
            GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
            SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
            EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
            InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
        Length = 886

 Score = 728 (261.3 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 150/329 (45%), Positives = 215/329 (65%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIR------EKM-DVIDLEDETIDAE-------- 257
             +  IA  THG+VGAD+ +LC EA+L+C        +K+   I++E E    E        
Sbjct:   525 IAMIASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQ 584

Query:   258 -ILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEH 316
              +L+ + ++      AL    PS++RE VVE+P V W DIGG E++K++L+E +++P+++
Sbjct:   585 NLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKY 644

Query:   317 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 376
             P+ F + G+ P KG+L YGPPGC KTLLAKA+A E   NFI+VKGPELL+ W GESE  V
Sbjct:   645 PQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAV 704

Query:   377 REIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFI 436
             R+IF KARQ++P +LFFDE+D +A                 ++QLLTEMDG+     V I
Sbjct:   705 RDIFKKARQNSPSILFFDEIDGLAISRSGEGSGAVERV---VSQLLTEMDGIQPLTNVTI 761

Query:   437 IGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYT 496
             IGATNRPDIID A+LR GR+D+++YI  PD ++R +IF   L+K P S D+D+  L+  T
Sbjct:   762 IGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILT 821

Query:   497 QGFSGADITEICQRACKYAIRENIE-KDI 524
              G+SGA++T IC+ A   A++E+I  K+I
Sbjct:   822 DGYSGAEVTSICREASIAAMKEDINAKEI 850

 Score = 242 (90.2 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 46/139 (33%), Positives = 80/139 (57%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N+N++ IGGL+   ++++E +       +  + FG+ P KG+L YGPPG GKTLLA+ +A
Sbjct:   308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
              +  A   ++ G ++L  ++G +E  +++IF  A Q +P ++F DELD++  +       
Sbjct:   368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE 427

Query:   410 XXXXXXXXLNQLLTEMDGM 428
                     +  LLT MDG+
Sbjct:   428 VEKRI---VGSLLTLMDGV 443

 Score = 171 (65.3 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 43/108 (39%), Positives = 58/108 (53%)

Query:   434 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVS-KDVDLRAL 492
             V +IG TNRPD ID AL RPGR D  I I +P+++ R QI    L K P      ++  +
Sbjct:   469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528

Query:   493 AKYTQGFSGADITEICQRA---CKYAIRENIEK-----DIERERRRSE 532
             A  T GF GADI  +C+ A   C   I+   +K     +IE+E +  E
Sbjct:   529 ASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKE 576

 Score = 42 (19.8 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query:    87 IRMNKVVRSNLRVRLGDVV 105
             I+++ + R N  V++GD V
Sbjct:   108 IQLDSIQRENCNVKIGDYV 126


>TAIR|locus:2103555 [details] [associations]
            symbol:CIP111 "Cam interacting protein 111" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
            eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
            EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
            RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
            SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
            EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
            GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
            PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
            Uniprot:Q9LET7
        Length = 1022

 Score = 651 (234.2 bits), Expect = 9.0e-72, Sum P(2) = 9.0e-72
 Identities = 123/264 (46%), Positives = 177/264 (67%)

Query:   260 NSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 319
             ++++V  E F+ A     PSA+RE ++EVP VNWED+GG   VK +L E V++P +H + 
Sbjct:   690 HTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDA 749

Query:   320 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 379
             F++ G  P  G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL + W GESE  VR +
Sbjct:   750 FKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSL 809

Query:   380 FDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGA 439
             F KAR +AP ++FFDE+DS+A+                ++QLL E+DG+  +  V +I A
Sbjct:   810 FAKARANAPSIIFFDEIDSLAS-IRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAA 868

Query:   440 TNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGF 499
             TNRPD ID ALLRPGR D+L+Y+  P+E  R  I K  LRK P S D+ L+ LA  T+G+
Sbjct:   869 TNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGY 928

Query:   500 SGADITEICQRACKYAIRENIEKD 523
             +GADI+ IC+ A   A+ E++E +
Sbjct:   929 TGADISLICREAAIAALEESLEME 952

 Score = 373 (136.4 bits), Expect = 2.2e-31, P = 2.2e-31
 Identities = 89/239 (37%), Positives = 123/239 (51%)

Query:   287 EVPNVNWE--DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             E  NV  E   +GGL      L++ +             G+ P+KGVL +GPPG GKT L
Sbjct:   376 EGENVGCEISKLGGLSKEYAILRDIIDSS-SIKNSLSSLGLRPTKGVLIHGPPGTGKTSL 434

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+  A     NF SV GPE+++ + GESE  + E+F  A  + P V+F D+LD+IA    
Sbjct:   435 ARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARK 494

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          L  L   MDG+S    V +I ATNRPD I+PAL RPGRLD+ I I +
Sbjct:   495 EGGEELSQRMVATLLNL---MDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGV 551

Query:   465 PDEESRLQIFKACLRKSPVS-KDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             P    R  I    LR    S  ++ +  LA  T GF GAD++ +C  A    +R ++++
Sbjct:   552 PSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQ 610

 Score = 105 (42.0 bits), Expect = 9.0e-72, Sum P(2) = 9.0e-72
 Identities = 19/33 (57%), Positives = 25/33 (75%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIREKMD 245
             V ++A  THG+VGADL+ALC EAA  C+R  +D
Sbjct:   577 VEQLAMATHGFVGADLSALCCEAAFVCLRRHLD 609


>FB|FBgn0032450 [details] [associations]
            symbol:CG5776 species:7227 "Drosophila melanogaster"
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
            "endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
            eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
            EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
            EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
            KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
            InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
            Uniprot:Q9VK63
        Length = 799

 Score = 673 (242.0 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 121/261 (46%), Positives = 178/261 (68%)

Query:   268 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             H + AL    PSA+RE ++E PNV W DIGG   ++  +Q+ +++P+ H +KF++ G+ P
Sbjct:   509 HLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKP 568

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              +G+L +GPPGC KT++AKA+A E + NF+S+KGPEL +MW GESE  VRE+F KARQ A
Sbjct:   569 PRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXX--LNQLLTEMDGMSAKKTVFIIGATNRPDI 445
             P ++FFDE+D+I  +                 L QLLTE+DG+ A + V I+ ATNRPD+
Sbjct:   629 PAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDM 688

Query:   446 IDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADIT 505
             ID ALLRPGR+D+++Y+ LP  E+R +I K  LR  P+S DVD+  L + T+G+SGA+I 
Sbjct:   689 IDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQ 748

Query:   506 EICQRACKYAIRENIE-KDIE 525
              +C  A   A+ ++ E +D++
Sbjct:   749 AVCHEAALRALEQSFEAEDVK 769

 Score = 209 (78.6 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 67/270 (24%), Positives = 131/270 (48%)

Query:   253 TIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQY 312
             ++D++ L  + VT+   K  L T + +   E       +    IGGL+   + ++E+++Y
Sbjct:   232 SLDSKPLQFIQVTNVT-KLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEY 290

Query:   313 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA---IANE-CQAN--FISVKGPELLT 366
              +    +    G+  S+G+L YG  GCGK+++ +A   +A E  Q +   I +   E+ +
Sbjct:   291 ALGF--RTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYS 348

Query:   367 MWFGESEANVREIFDKA--RQSAPCVLFFDELDSIAT-QXXXXXXXXXXXXXXXLNQLLT 423
              + GE+E  +  IF++A      P +L  +++ ++   Q               L   L+
Sbjct:   349 KFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLVKRVSLAFLSLLDQLS 408

Query:   424 EMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPV 483
                 +   KT F++  +++ D + P++ R GRLD  + +  P  ++RL+I + CL KS  
Sbjct:   409 SPSQLKGSKT-FVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVR-CLIKSVE 466

Query:   484 SK--DVDLRALAKYTQGFSGADITEICQRA 511
              +  D ++  +A  T G+ GAD+  +   A
Sbjct:   467 HQLSDEEVEHVASITHGYVGADLANLVYAA 496

 Score = 71 (30.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 16/26 (61%), Positives = 17/26 (65%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQ 238
             V  +A  THGYVGADLA L   A LQ
Sbjct:   474 VEHVASITHGYVGADLANLVYAAMLQ 499


>CGD|CAL0000102 [details] [associations]
            symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
            "hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
            [GO:0000055 "ribosomal large subunit export from nucleus"
            evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
            evidence=IEA] [GO:0044011 "single-species biofilm formation on
            inanimate substrate" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
            GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
            EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
            ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
            GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
            Uniprot:Q5AGG2
        Length = 827

 Score = 668 (240.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 135/337 (40%), Positives = 211/337 (62%)

Query:   247 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 306
             +++  + ++ E L  +A+T + F  AL +  PSA RE    +P+V W+++G L  ++ EL
Sbjct:   475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
                +  P++ PE + K G++   GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL 
Sbjct:   535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GESE  VR++F +AR S PC++FFDELD++  +               +N LLTE+D
Sbjct:   595 KYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRV---VNTLLTELD 651

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR--KSPVS 484
             G++ +K VF+IGATNRPD+IDPA+LRPGRLD+ +YI LP  E RL+I K  +R   SP+ 
Sbjct:   652 GLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLH 711

Query:   485 KDVDLRALAKYTQ--GFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXX 542
              +VDL A+++ ++   FSGAD++ + + A  +A+++   ++  ++ +  ++         
Sbjct:   712 ANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQN--QKIQELDSSGFYEDSIG 769

Query:   543 XXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
                  I A  F+ ++   R SVSD D  +Y+   + L
Sbjct:   770 EDDISITAEDFDHALSSIRPSVSDRDRMRYEKLNKKL 806

 Score = 453 (164.5 bits), Expect = 4.7e-42, P = 4.7e-42
 Identities = 97/246 (39%), Positives = 144/246 (58%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R+     PN++   +GG+E+V  +L E +  P+ HPE +   G+ P +GVL YGPPGCGK
Sbjct:   181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             T +A A+A E +  FI++  P +++   GESE  +REIF++A+Q APC++F DE+D+I  
Sbjct:   241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLD 457
             +                 QLLT MD ++ +KT    V +IGATNRPD +D AL R GR D
Sbjct:   301 KRDGGAQREMEKRIVA--QLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFD 358

Query:   458 QLIYIPLPDEESRLQIFKACLR--KSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             + I + +P+EE R+ I KA  +  K    +  + R L+K T G+ GAD+  +   A   A
Sbjct:   359 REICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418

Query:   516 IRENIE 521
             I+   E
Sbjct:   419 IKRIFE 424

 Score = 76 (31.8 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 16/41 (39%), Positives = 28/41 (68%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVI-DLEDET 253
             R+++K T GYVGADL +L T A +  I+   + + +L++E+
Sbjct:   393 RELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEES 433


>UNIPROTKB|Q5AGG2 [details] [associations]
            symbol:RIX7 "Putative uncharacterized protein"
            species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
            growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
            on inanimate substrate" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
            GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
            EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
            ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
            GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
            Uniprot:Q5AGG2
        Length = 827

 Score = 668 (240.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 135/337 (40%), Positives = 211/337 (62%)

Query:   247 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 306
             +++  + ++ E L  +A+T + F  AL +  PSA RE    +P+V W+++G L  ++ EL
Sbjct:   475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
                +  P++ PE + K G++   GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL 
Sbjct:   535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GESE  VR++F +AR S PC++FFDELD++  +               +N LLTE+D
Sbjct:   595 KYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRV---VNTLLTELD 651

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR--KSPVS 484
             G++ +K VF+IGATNRPD+IDPA+LRPGRLD+ +YI LP  E RL+I K  +R   SP+ 
Sbjct:   652 GLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLH 711

Query:   485 KDVDLRALAKYTQ--GFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXX 542
              +VDL A+++ ++   FSGAD++ + + A  +A+++   ++  ++ +  ++         
Sbjct:   712 ANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQN--QKIQELDSSGFYEDSIG 769

Query:   543 XXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
                  I A  F+ ++   R SVSD D  +Y+   + L
Sbjct:   770 EDDISITAEDFDHALSSIRPSVSDRDRMRYEKLNKKL 806

 Score = 453 (164.5 bits), Expect = 4.7e-42, P = 4.7e-42
 Identities = 97/246 (39%), Positives = 144/246 (58%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R+     PN++   +GG+E+V  +L E +  P+ HPE +   G+ P +GVL YGPPGCGK
Sbjct:   181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             T +A A+A E +  FI++  P +++   GESE  +REIF++A+Q APC++F DE+D+I  
Sbjct:   241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLD 457
             +                 QLLT MD ++ +KT    V +IGATNRPD +D AL R GR D
Sbjct:   301 KRDGGAQREMEKRIVA--QLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFD 358

Query:   458 QLIYIPLPDEESRLQIFKACLR--KSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             + I + +P+EE R+ I KA  +  K    +  + R L+K T G+ GAD+  +   A   A
Sbjct:   359 REICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418

Query:   516 IRENIE 521
             I+   E
Sbjct:   419 IKRIFE 424

 Score = 76 (31.8 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 16/41 (39%), Positives = 28/41 (68%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVI-DLEDET 253
             R+++K T GYVGADL +L T A +  I+   + + +L++E+
Sbjct:   393 RELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEES 433


>DICTYBASE|DDB_G0282181 [details] [associations]
            symbol:nvl "valosin-containing protein" species:44689
            "Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
            export from nucleus" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
            GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
            RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
            EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
            InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
            Uniprot:Q54SY2
        Length = 867

 Score = 676 (243.0 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
 Identities = 130/277 (46%), Positives = 178/277 (64%)

Query:   249 LEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQE 308
             +  E ++ E LNS+ +    FK AL    P+A RE    +PNV W+D+G L  V+ EL  
Sbjct:   521 ISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTN 580

Query:   309 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 368
             ++  P+ +P+K++  G+    GVL YGPPGCGKTLLAKAIA+ECQANFISVKGPELL  +
Sbjct:   581 SILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKY 640

Query:   369 FGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGM 428
              GESE  VR++F +A  S+PCV+FFDE D++A +               +NQLLTEMDG+
Sbjct:   641 VGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGL 700

Query:   429 SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVD 488
               +  VFII ATNRPDIID A+ RPGRLD+++Y+PLP  E R +I K    K P+ +DVD
Sbjct:   701 EKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVD 760

Query:   489 LRALAKYTQ--GFSGADITEICQRACKYAIRENIEKD 523
             L  +    +   FSGAD++ + + A  +AI    + +
Sbjct:   761 LIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNN 797

 Score = 304 (112.1 bits), Expect = 5.5e-34, Sum P(2) = 5.5e-34
 Identities = 59/157 (37%), Positives = 95/157 (60%)

Query:   288 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 347
             +P +N+ ++GG+E+  R+++E ++YP+ HPE +   G+ P +G+L +GP GCGKTLLAKA
Sbjct:   210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269

Query:   348 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXX 407
             IA E +    ++   E+ +   GESEA VR +F  A   APC++F DE+D+IA +     
Sbjct:   270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESAS 329

Query:   408 XXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPD 444
                       ++QLLT MD ++   +     +TN P+
Sbjct:   330 KDMERRI---VSQLLTCMDSLNYLSSN---NSTNEPN 360

 Score = 144 (55.7 bits), Expect = 5.5e-34, Sum P(2) = 5.5e-34
 Identities = 31/86 (36%), Positives = 48/86 (55%)

Query:   431 KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLR 490
             K  V +IGATNRP+ +D AL   GR D+ I + +PD+ +R +I K    K  +  + D  
Sbjct:   400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459

Query:   491 ALAKYTQGFSGADITEICQRACKYAI 516
              +A  T G+ GADI  + + A   ++
Sbjct:   460 EIATLTPGYVGADINLLVKEAATNSV 485

 Score = 59 (25.8 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query:   177 EYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAA 236
             E C+  PD    C+   V    + RL+   +D      +IA  T GYVGAD+  L  EAA
Sbjct:   428 EICLGIPDQTARCKILKVITS-KMRLEN-NFD----YEEIATLTPGYVGADINLLVKEAA 481

Query:   237 LQCI 240
                +
Sbjct:   482 TNSV 485

 Score = 45 (20.9 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query:    60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRV 99
             DT L  G +    +C+ + D T    + ++ KV+ S +R+
Sbjct:   416 DTALRIGGRFDKEICLGIPDQTA---RCKILKVITSKMRL 452


>POMBASE|SPBC56F2.07c [details] [associations]
            symbol:SPBC56F2.07c "ribosome biogenesis factor
            recycling AAA family ATPase (predicted)" species:4896
            "Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
            evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
            RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
            PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
            KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
            OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
            Uniprot:O60058
        Length = 809

 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 145/310 (46%), Positives = 204/310 (65%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A  TH YVGADLAA+  EAAL+ I+     I L+ +T   +I  ++ + D  F  AL +
Sbjct:   475 LASRTHAYVGADLAAVVREAALRAIKR---TISLQKDTSGLDIFGAVQMDDLEF--ALSS 529

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
                SA+RE ++E PNV+W DIGG E VK++L+E+V++P+ H E F + G+ P KGVL YG
Sbjct:   530 VRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYG 589

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
             PPGC KT+ AKAIA E   NFI+VKGPEL   + GESE  VR++F KARQ++P V+FFDE
Sbjct:   590 PPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDE 649

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
             +D++                     LL E+DG+ A + V ++ ATNRPD+IDPAL+RPGR
Sbjct:   650 IDALTANRGEDNSSDRVVAA-----LLNELDGIEALRNVLVLAATNRPDMIDPALMRPGR 704

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             LD+L+Y+  P+ E+R QI K    K   ++DVDL  +A+ T+G SGA++  +CQ A   A
Sbjct:   705 LDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIA 764

Query:   516 IRENIE-KDI 524
             + E++E K+I
Sbjct:   765 MHEDLEAKEI 774

 Score = 420 (152.9 bits), Expect = 3.3e-38, P = 3.3e-38
 Identities = 89/236 (37%), Positives = 136/236 (57%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V +  IGGL+    ++++ V+ P ++PE F+ F + P +GVL YGPPG GKT++ +A+A 
Sbjct:   276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A   ++ GP ++  + GE+E+ +R+IF+ AR   P ++F DE+D++A +        
Sbjct:   336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEA 395

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L   LT +DGM+    V +I ATNRP+ ID AL RPGRL++ I I +PD+ +R
Sbjct:   396 ESRAVATL---LTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSAR 452

Query:   471 LQIFKACLRKSPVS-KDVDLRALAKYTQGFSGADITEICQRACKYAIRENI--EKD 523
             L I K  L   P    D  L  LA  T  + GAD+  + + A   AI+  I  +KD
Sbjct:   453 LDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKD 508


>CGD|CAL0002187 [details] [associations]
            symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0042493 "response to drug"
            evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
            eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
            SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
            ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
            KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
        Length = 766

 Score = 680 (244.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
 Identities = 147/312 (47%), Positives = 193/312 (61%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTA 272
             +  IA  THGYVGADL ALC E+ ++ I   + V  +    I       + V D +   A
Sbjct:   427 IASIASKTHGYVGADLTALCRESVMKAINRGLTV-GIPQTAI------KVTVDDVYH--A 477

Query:   273 LGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 332
             L    PSA+RE  +E+P V+W DIGG E +KR+L E VQ P+E  + F+  G+S  KGVL
Sbjct:   478 LPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVL 537

Query:   333 FYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLF 392
              YGPPGC KTL AKA+A E   NF++VKGPE+   + GESE  +REIF KAR ++P ++F
Sbjct:   538 LYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIF 597

Query:   393 FDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLR 452
             FDE+D+IA                 L  LL E+DG+   K V I+GATN+P  IDPALLR
Sbjct:   598 FDEIDAIAGDRDGDSSTTAASNV--LTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLR 655

Query:   453 PGRLDQLIYIPLPDEESRLQIFKACLRKSPVS---KDVDLRALAKYTQGFSGADITEICQ 509
             PGRLD+ IY+  PD ++RLQI + C RK  +    + VDL+ LA+ T G SGA++T +CQ
Sbjct:   656 PGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQ 715

Query:   510 RACKYAIRENIE 521
              A   AI EN E
Sbjct:   716 EAGLAAIMENKE 727

 Score = 443 (161.0 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
 Identities = 132/471 (28%), Positives = 225/471 (47%)

Query:    68 KRKDTVCIALADDTCEEPKIRMNK--VVRSNLRVRLGDVVSVH------QCADVKYGKRV 119
             K+K+         T    KI++ K  +VR N+      V +V+         ++  G  V
Sbjct:     8 KKKNNGVSTPESSTAPAKKIKIPKSFIVRPNVPTNNKSVANVYINPEILSAMELNNGNLV 67

Query:   120 HILPVDDTIEGVTGNLF---DAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPP 176
              +   D    GV   ++   D   K   T ++ P R+    L+   +  V+F     + P
Sbjct:    68 LVSSSDSGSAGVVATVYSSNDIVDKNVITISF-PYRQLCGLLLGDRVELVKFM----NQP 122

Query:   177 EYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAA 236
             +Y   A D  I    E V  +  + L ++G    G   +I  D       D+       +
Sbjct:   123 QY---ASDISISGVEETVTEDVRSALLDIGLVYPG--LQINVDNKRITIVDV-----NDS 172

Query:   237 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPN-VNWED 295
             L    +K+ + D  D  +    ++   +        + TS+  A R     +P  + ++ 
Sbjct:   173 LDASMDKLSIKD-SDSLLSVHTVSPPYLFSPTTSINVATSSFPA-RSKYPNLPQQITYDQ 230

Query:   296 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-QA 354
             +GGL      L+ T++ P+ +P  F  FG+SP +G+L +GPPG GKT+L + +AN   +A
Sbjct:   231 VGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEA 290

Query:   355 NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXX 414
             + +++ GP +++ + GE+E  +R+IF++A++  P ++F DE+DSIA              
Sbjct:   291 HVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESR 350

Query:   415 XXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF 474
                  QLLT MDGM     + +IGATNRP+ ID AL RPGR DQ + I +PD E+R +I 
Sbjct:   351 VVA--QLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEIL 408

Query:   475 -----KACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
                  K    K  ++K+ ++ ++A  T G+ GAD+T +C+ +   AI   +
Sbjct:   409 TKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLTALCRESVMKAINRGL 458

 Score = 42 (19.8 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query:   552 HFEESMKYARRSVSDADIRKYQAFAQ 577
             HFE ++K   R ++   +  Y+ F++
Sbjct:   735 HFEHALKGISRGITPEMLEYYEKFSK 760


>POMBASE|SPBC16E9.10c [details] [associations]
            symbol:SPBC16E9.10c "AAA family ATPase Rix7
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
            "ribosomal large subunit export from nucleus" evidence=ISO]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
            "ATPase activity" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
            EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
            HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
            OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
            ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
            GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
            Uniprot:O14325
        Length = 779

 Score = 651 (234.2 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
 Identities = 136/333 (40%), Positives = 200/333 (60%)

Query:   247 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 306
             ++   + +  E L  +A+  + F  AL    PS+ RE    VP V+W +IG L++++ EL
Sbjct:   445 LNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVEL 504

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             Q  +  P++ PE ++  G+S   GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL 
Sbjct:   505 QMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLN 564

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GESE  VR++F +AR S+PCV+FFDELD++  +               +N LLTE+D
Sbjct:   565 KYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRV---VNTLLTELD 621

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G+S +  V++I ATNRPDIIDPA+LRPGRLD+ + + LPD   R++I K   +++P+ ++
Sbjct:   622 GLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEE 681

Query:   487 VDLRALAKYTQ--GFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXX 544
             V+L  L +  +   FSGAD+  + + A   A+R  +  DI      S  P          
Sbjct:   682 VNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIA-----SNEPEITQHSALEP 736

Query:   545 XXXIKAVHFEESMKYARRSVSDADIRKYQAFAQ 577
                  A  FE + K  + SVSD D +KYQ  A+
Sbjct:   737 IRVTNA-DFELAFKNIKPSVSDRDRQKYQRLAK 768

 Score = 471 (170.9 bits), Expect = 3.8e-44, P = 3.8e-44
 Identities = 111/279 (39%), Positives = 160/279 (57%)

Query:   247 IDLEDE--TIDAE-ILNSMAVTDEHFKTALGTSNPSALRETVVEVPN-VNWEDIGGLENV 302
             ID EDE  ++  E I  S    D   KT  G+    A  E   E P+ ++  DIGGL++ 
Sbjct:   126 IDGEDEKKSVGQESITGSAKRKDRRSKTN-GSKRQKA--EANREPPSDISLSDIGGLDDC 182

Query:   303 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 362
               EL E V  P++HPE ++  G+ P +GVL +GPPGCGKT+LA A+ANE    FIS+  P
Sbjct:   183 INELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAP 242

Query:   363 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLL 422
              +++   GESE  VRE+F++A+  APC++F DE+D++  +                 Q L
Sbjct:   243 SIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVA---QFL 299

Query:   423 TEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL 478
             T MD +S +KT    V +IGATNRPD +D AL R GR D+ I + +P +++R +I +   
Sbjct:   300 TCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMA 359

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             +   +S D D R LAK T G+ GAD+  +   A   AI+
Sbjct:   360 KGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398

 Score = 71 (30.1 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIR 241
             R++AK T GYVGADL AL   A +  I+
Sbjct:   371 RQLAKQTPGYVGADLKALTAAAGIIAIK 398


>MGI|MGI:1914709 [details] [associations]
            symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
            eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
            CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
            EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
            IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
            PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
            PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
            Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
            UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
            EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
            Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
        Length = 855

 Score = 627 (225.8 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
 Identities = 136/337 (40%), Positives = 195/337 (57%)

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
             + + +  E +  + +    F  AL    PSA RE  V VPNV W DIG LE+++ EL   
Sbjct:   536 DQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMA 595

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             +  PV +P++F   G+    G+L  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+ 
Sbjct:   596 ILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 655

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             GESE  VR++F +A+ SAPCV+FFDE+D++  +               +NQLLTEMDG+ 
Sbjct:   656 GESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRV---VNQLLTEMDGLE 712

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR---KSPVSKD 486
              ++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    R+ I K   +   K P+ +D
Sbjct:   713 TRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDED 772

Query:   487 VDLRALAKYTQG--FSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXX 544
             V+L  +A   +   ++GAD+T + + A   A+R+ I           +N           
Sbjct:   773 VNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQ--------KN------GVGAG 818

Query:   545 XXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQ 581
                +   HFE++ K  + S+S  D   Y+A  ++L Q
Sbjct:   819 ELKVSHKHFEDAFKKVKPSISIKDQVMYEALQRSLSQ 855

 Score = 461 (167.3 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
 Identities = 91/251 (36%), Positives = 149/251 (59%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R T +++ NV +ED+GG +   +E+ + + + + HPE ++  G+ P +GVL +GPPGCGK
Sbjct:   252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             TLLA AIA E     + V  PE+++   GESE  +RE+FD+A  +APC++F DE+D+I  
Sbjct:   311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITP 370

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               L   + +++ ++A   V +IGATNRPD +DPAL R GR D+ + 
Sbjct:   371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVC 430

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             + +PDE +R +I +   RK  + +  +   LA  T GF GAD+  +C+ A   A+   + 
Sbjct:   431 LGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLM 490

Query:   522 KDIERERRRSE 532
             K   +++++ E
Sbjct:   491 KQQAQQKKKPE 501

 Score = 67 (28.6 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
 Identities = 14/22 (63%), Positives = 17/22 (77%)

Query:   216 IAKDTHGYVGADLAALCTEAAL 237
             +A  T G+VGADL ALC EAA+
Sbjct:   461 LAHLTPGFVGADLMALCREAAM 482

 Score = 39 (18.8 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query:   184 DTEIFCEGEPVRREDENRLDEVGYDDVGG 212
             + E   + +   R  E ++  V ++DVGG
Sbjct:   240 EIEALLQKKAKARSTELQISNVKFEDVGG 268


>SGD|S000004389 [details] [associations]
            symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
            forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0030687 "preribosome, large subunit precursor"
            evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
            large subunit biogenesis" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
            EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
            KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
            EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
            ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
            MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
            EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
            GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
            Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
            Uniprot:P32794
        Length = 780

 Score = 678 (243.7 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
 Identities = 142/314 (45%), Positives = 195/314 (62%)

Query:   209 DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEH 268
             D   ++ IA  THGYVGADL ALC E+ ++ I+  +      D  ID     S+ VT + 
Sbjct:   438 DSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGT----DANIDKF---SLKVTLKD 490

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
              ++A+    PSA+RE  +E+P V W DIGG E +K +++E +Q P+E  E F + G+S  
Sbjct:   491 VESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAP 550

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
             KGVL YGPPGC KTL AKA+A E   NF++VKGPE+   + GESE  +REIF KAR +AP
Sbjct:   551 KGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAP 610

Query:   389 CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 448
              ++FFDE+D+++                 L  LL E+DG+   K V I+ ATNRPD ID 
Sbjct:   611 SIIFFDEIDALSPDRDGSSTSAANHV---LTSLLNEIDGVEELKGVVIVAATNRPDEIDA 667

Query:   449 ALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD-VDLRALAKYTQGFSGADITEI 507
             ALLRPGRLD+ IY+  PD  +RL+I K C +K    +  VDL  LA  T+G+SGA++  +
Sbjct:   668 ALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLL 727

Query:   508 CQRACKYAIRENIE 521
             CQ A   AI E+++
Sbjct:   728 CQEAGLAAIMEDLD 741

 Score = 433 (157.5 bits), Expect = 6.5e-42, Sum P(2) = 6.5e-42
 Identities = 88/237 (37%), Positives = 137/237 (57%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             +++  +GGL+     L+  ++ P+  P  F  FG+SP +G+L +GPPG GKT+L + +AN
Sbjct:   242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                A+ +++ GP +++ + GE+EA +R+IF++AR+  P ++F DE+DSIA          
Sbjct:   302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGE 361

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                       LLT MDGM A   V +I ATNRP+ +DPAL RPGR DQ + I +PD ++R
Sbjct:   362 VESRVVAT--LLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDAR 419

Query:   471 LQIF-KACLRKSPVSKDVDLRAL---AKYTQGFSGADITEICQRACKYAIRENIEKD 523
               I  K   R S     +D  A+   A  T G+ GAD+T +C+ +    I+  +  D
Sbjct:   420 FDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTD 476

 Score = 42 (19.8 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   552 HFEESMKYARRSVSDADIRKYQAFA 576
             HFE++ K   R ++   +  Y+ FA
Sbjct:   749 HFEKAFKGIARGITPEMLSYYEEFA 773


>UNIPROTKB|J9P5D7 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
            EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
            EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
        Length = 855

 Score = 644 (231.8 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
 Identities = 145/355 (40%), Positives = 208/355 (58%)

Query:   233 TEAALQCIREKMD-VIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP 289
             +E  +  +++++  +++L    + +  E L  + +    F  AL +  PSA RE  V VP
Sbjct:   516 SETPVLSVQDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVP 575

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V W DIG LE+++ EL   +  PV  PE+F   G+    GVL  GPPGCGKTLLAKA+A
Sbjct:   576 SVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVA 635

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             NE   NFISVKGPELL M+ GESE  VR++F +AR SAPCV+FFDE+D++  +       
Sbjct:   636 NESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETG 695

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     +NQLLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    
Sbjct:   696 ASVRV---VNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD 752

Query:   470 RLQIFKACLR---KSPVSKDVDLRALAKYTQG--FSGADITEICQRACKYAIRENIEKDI 524
             RL I K   +   + P+  DV+L ALA   +   +SGAD++ + + A   A+R+ + +  
Sbjct:   753 RLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRP- 811

Query:   525 ERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
             +    R E               +   HFEE+ K  + S+S  D   Y+A  Q+L
Sbjct:   812 KGGGDRGE-------------LKVSQKHFEEAFKKVKSSISKKDQVMYEALRQSL 853

 Score = 430 (156.4 bits), Expect = 1.6e-39, P = 1.6e-39
 Identities = 90/231 (38%), Positives = 134/231 (58%)

Query:   286 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 345
             ++V  V +ED+GG +   +E+ + + + + HPE +   G  P +GVL +GPPGCGKTLLA
Sbjct:   251 LQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLA 309

Query:   346 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXX 405
              AIA E     + V   E+++   GESE  +RE+F++A  +APCVLF DE+D+I  +   
Sbjct:   310 HAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREV 369

Query:   406 XXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                         L   + +++  +A   V +IGATNRPD +DPAL R GR D+ I + +P
Sbjct:   370 ASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 429

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
             DE SR +I +   RK  + +    R LA  T GF GAD+  +C+ A   A+
Sbjct:   430 DEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480

 Score = 76 (31.8 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEI 258
             R +A  T G+VGADL ALC EAA+  +   +  +  E +  D E+
Sbjct:   454 RHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQ-EQQPTDPEM 497


>UNIPROTKB|E1BT72 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
            GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
            GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
            Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
        Length = 858

 Score = 647 (232.8 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
 Identities = 142/336 (42%), Positives = 200/336 (59%)

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
             + + +  + L  + +    F  AL +  PSA RE  V +P+V W DIG LE+V+ EL   
Sbjct:   537 KQDPLPEDQLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMA 596

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             +  PV +PE+F+  G++   GVL  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+ 
Sbjct:   597 ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 656

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             GESE  VR++F +AR SAPCV+FFDE+D++  +               +NQLLTEMDG+ 
Sbjct:   657 GESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASVRV---VNQLLTEMDGLE 713

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR---KSPVSKD 486
              ++ VFI+ ATNRPDIIDPA+LRPGRLD+ +Y+ LP  E RL I K   +   + P+  D
Sbjct:   714 NRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTD 773

Query:   487 VDLRALAKYTQG---FSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXX 543
             V+L  +A Y+Q    ++GAD++ + + A   A+R+  E  +   + + E           
Sbjct:   774 VNLEEIA-YSQQCDCYTGADLSALVREASICALRQ--EMALPTTKSKKEK---------- 820

Query:   544 XXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTL 579
                 I   HFEE+ +  + SVS  D   Y+   Q+L
Sbjct:   821 GEIKISRKHFEEAFRKVKSSVSKKDQIMYEELRQSL 856

 Score = 447 (162.4 bits), Expect = 2.4e-41, P = 2.4e-41
 Identities = 92/241 (38%), Positives = 141/241 (58%)

Query:   289 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 348
             P+V +ED+GG +   +E+ + + + V HPE +   G+ P +G L +GPPGCGKTLLA+AI
Sbjct:   255 PSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
             A E +   + V   E+++   GESE  +RE+FD+A  +APCVLF DE+D+I  +      
Sbjct:   314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASK 373

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 468
                      L   L +++ ++A   V +IGATNRPD +DPAL R GR D+ I + +PDE 
Sbjct:   374 DMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 433

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERER 528
             +R +I +   RK  +    D   LA  T G+ GAD+  +C+ A    +   + K  E++R
Sbjct:   434 AREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQR 493

Query:   529 R 529
             +
Sbjct:   494 K 494

 Score = 72 (30.4 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 252
             +A  T GYVGADL ALC EAA+ C   ++ +I  E++
Sbjct:   457 LAHLTPGYVGADLMALCREAAM-CTVNRV-LIKSEEQ 491


>RGD|1311270 [details] [associations]
            symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
            evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
            GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
            OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
            RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
            GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
            Uniprot:D3ZTY9
        Length = 855

 Score = 646 (232.5 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
 Identities = 140/337 (41%), Positives = 196/337 (58%)

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
             + + I  E +  + +    F  AL    PSA RE  V VPNV W D+G LE+++ EL   
Sbjct:   536 DQDPISEEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMA 595

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             +  PV +PE+F   G+    GVL  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+ 
Sbjct:   596 ILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 655

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             GESE  VR++F +A+ SAPCV+FFDE+D++  +               +NQLLTEMDG+ 
Sbjct:   656 GESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRV---VNQLLTEMDGLE 712

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR---KSPVSKD 486
              ++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    R+ I K   +   K P+ +D
Sbjct:   713 TRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDED 772

Query:   487 VDLRALAK--YTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXX 544
             VDL A+A       ++GAD++ + + A   A+R+ I           +N           
Sbjct:   773 VDLEAIANDHRCDCYTGADLSALVREASLCALRQEITGQ--------KN------GIGTA 818

Query:   545 XXXIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQ 581
                +   HFEE+ +  + S+S  D R Y+A  ++L Q
Sbjct:   819 ELTVSHKHFEEAFRKVKPSISVKDQRMYEALQRSLSQ 855

 Score = 452 (164.2 bits), Expect = 6.8e-42, P = 6.8e-42
 Identities = 89/251 (35%), Positives = 148/251 (58%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             + T +++ +V +ED+GG +   +E+ + + + + HPE ++  G+ P +GVL +GPPGCGK
Sbjct:   252 KSTELQISSVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             TLLA AIA E     + V  PE+++   GESE  +R++FD+A  +APC++F DE+D+I  
Sbjct:   311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITP 370

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 461
             +               L   + +++ ++A   V ++GATNRPD +DPAL R GR D+ + 
Sbjct:   371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVC 430

Query:   462 IPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             + +PDE SR +I +   RK  + +  +   LA  T GF GAD+  +C+ A   A+   + 
Sbjct:   431 LGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRVLM 490

Query:   522 KDIERERRRSE 532
             +  E++R   E
Sbjct:   491 RRQEQQRTEPE 501

 Score = 69 (29.3 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A  T G+VGADL ALC EAA+ C   ++ +   E +  + E    +    E  ++ LG 
Sbjct:   461 LAHLTPGFVGADLMALCREAAV-CAVHRVLMRRQEQQRTEPET-GGLPSDGEQGRS-LGA 517

Query:   276 SNPSALRE 283
               PS  ++
Sbjct:   518 EPPSETQD 525


>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
            symbol:nvl "nuclear VCP-like" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
            KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
            RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
            STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
            NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
        Length = 796

 Score = 626 (225.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
 Identities = 135/334 (40%), Positives = 195/334 (58%)

Query:   253 TIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQY 312
             ++  + L ++ V    F ++L    PSA RE    VP+V W D+G L++V+ EL   +  
Sbjct:   479 SLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMA 538

Query:   313 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 372
             P+++PE+F+  G+S   G+L  GPPGCGKTLLAKA+AN    NFISVKGPELL M+ GES
Sbjct:   539 PIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGES 598

Query:   373 EANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKK 432
             E  VR++F + R SAPCV+FFDE+D++  +               +NQLLTEMDGM  ++
Sbjct:   599 ERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASVRV---VNQLLTEMDGMENRR 655

Query:   433 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR---KSPVSKDVDL 489
              VFI+ ATNRPDIIDPA+LRPGRLD+ +Y+ LP    R  I     +   K  +  DV L
Sbjct:   656 QVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGTKPQLDSDVSL 715

Query:   490 RALAKYT--QGFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXX 547
               +A     + F+GAD++ + + AC  A+R +++      +  +E+              
Sbjct:   716 EEIAHDARCETFTGADLSALVREACVNALRVHLDP----AQTHTES---------AKDIR 762

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQ 581
             +  VHFE++ K  R SVS  D   Y+   +TL +
Sbjct:   763 VSRVHFEDAFKKVRPSVSKKDQLMYERLRETLSR 796

 Score = 464 (168.4 bits), Expect = 2.5e-43, P = 2.5e-43
 Identities = 93/252 (36%), Positives = 148/252 (58%)

Query:   266 DEHFKTALGT-SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 324
             +E  +T+ G  +  S ++   ++  +V +ED GG +    E+ + + + + HPE +++ G
Sbjct:   198 EEDSETSAGVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLG 256

Query:   325 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 384
             + P +G L +GPPGCGKTLLA+A+A E     + +  PEL++   GESE  +RE+F++A 
Sbjct:   257 VVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAI 316

Query:   385 QSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPD 444
              SAPC+LF DE+D+I  +               L   + +++ M     V +IGATNRPD
Sbjct:   317 SSAPCILFIDEIDAITPKRETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPD 376

Query:   445 IIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI 504
              +DPAL R GR D+ I + +PDE +R++I K   RK  +  D D R LA+ T G+ GAD+
Sbjct:   377 SLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADL 436

Query:   505 TEICQRACKYAI 516
               +C+ A   A+
Sbjct:   437 MALCREAAMNAV 448

 Score = 83 (34.3 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAV 264
             R +A+ T GYVGADL ALC EAA+  +      I LE  T D +I  ++A+
Sbjct:   422 RHLARLTPGYVGADLMALCREAAMNAVNR----ILLEPTTED-QITPTLAL 467


>SGD|S000003957 [details] [associations]
            symbol:RIX7 "Putative ATPase of the AAA family" species:4932
            "Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
            export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
            subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
            large subunit precursor" evidence=IDA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
            GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
            eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
            GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
            EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
            SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
            STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
            GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
            NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
            Uniprot:Q07844
        Length = 837

 Score = 635 (228.6 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
 Identities = 130/329 (39%), Positives = 197/329 (59%)

Query:   252 ETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQ 311
             E +  E L+ +++  E F  AL T  P+A RE    VP+V W ++G L+ V+ EL   + 
Sbjct:   491 EPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIV 550

Query:   312 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 371
              P++ PE +EK G+S   GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL  + GE
Sbjct:   551 QPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGE 610

Query:   372 SEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             SE ++R++F +AR S PCV+FFDELD++  +               +N LLTE+DG++ +
Sbjct:   611 SERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV---VNTLLTELDGLNDR 667

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK--SPVSKDVDL 489
             + +F+IGATNRPD+IDPA+LRPGRLD+ ++I LP+ E +L I K   +   +P+S DVD 
Sbjct:   668 RGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDF 727

Query:   490 RALAKYTQ--GFSGADITEICQRACKYAIRENI--EKDIER--ERRRSENPXXXXXXXXX 543
               + +  +   FSGAD+  + + +   A++      ++I+   +    +           
Sbjct:   728 EEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSG 787

Query:   544 XXXXIKAVHFEESMKYARRSVSDADIRKY 572
                 +    F  +++  + SVSD D  KY
Sbjct:   788 EEIIVTMSDFRSALRKIKPSVSDKDRLKY 816

 Score = 463 (168.0 bits), Expect = 4.0e-43, P = 4.0e-43
 Identities = 98/233 (42%), Positives = 138/233 (59%)

Query:   289 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 348
             PN + + +GG+++V  +L E +  P+ HPE F   G+ P +GVL +GPPGCGKT +A A+
Sbjct:   200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
             A E Q  FIS+  P +++   GESE  +R++FD+AR  APC++FFDE+D+I  +      
Sbjct:   260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQ 319

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                        QLLT MD ++ +KT    V IIGATNRPD +D AL R GR D+ I + +
Sbjct:   320 REMERRIVA--QLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNV 377

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+E SRL I K       +   +D   LAK T GF GAD+  +   A   AI+
Sbjct:   378 PNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430

 Score = 66 (28.3 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query:   203 DEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIR 241
             D +  D      K+AK T G+VGADL AL T A    I+
Sbjct:   392 DNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430


>ASPGD|ASPL0000062283 [details] [associations]
            symbol:AN1366 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
            EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
        Length = 729

 Score = 631 (227.2 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
 Identities = 128/287 (44%), Positives = 185/287 (64%)

Query:   240 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 299
             ++E   +I    ET        + V+++ F TAL    PS+ RE    +P+  W DIG L
Sbjct:   415 VKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGAL 474

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
               ++ EL   +  P++HPE +   G++   GVL +GPPGCGKTLLAKA+ANE +ANFISV
Sbjct:   475 SGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISV 534

Query:   360 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 419
             KGPELL  + GESE  VR++F +AR S PCV+FFDELD++  +               +N
Sbjct:   535 KGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASARV---VN 591

Query:   420 QLLTEMDGM-SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL 478
              LLTE+DG+ S+++ +++I ATNRPDIIDPA+LRPGRL+ L+++ LP    R++I +  +
Sbjct:   592 TLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLV 651

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI--RENIEKD 523
             R+ P+  + DLR LA+  +GFSGAD+T + +RA   AI  R+ I+ D
Sbjct:   652 RRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRRDTIKFD 698

 Score = 424 (154.3 bits), Expect = 4.0e-39, P = 4.0e-39
 Identities = 91/236 (38%), Positives = 140/236 (59%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V+  D+GGL++V ++L + V  P+  P+ +    + P +GVL +GPPGCGKT++A A A
Sbjct:   161 HVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFA 220

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
              E    FIS+  P +++   GESE  +RE F++A++ APC++F DE+D+I  +       
Sbjct:   221 AELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQRE 280

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                       QLLT MD ++ +KT    V ++ ATNRPD +D AL R GR D+ I + +P
Sbjct:   281 MEKRIVA---QLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVP 337

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
              E  R QI +A  RK  +  D+D + LAK T GF GAD+ ++   A   AI+  ++
Sbjct:   338 SEPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLD 393

 Score = 68 (29.0 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
 Identities = 23/69 (33%), Positives = 34/69 (49%)

Query:   192 EPVRREDENRLDEVG--YDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             EPVR +    L       DD+   + +AK T G+VGADL  L + A    I+  +D++  
Sbjct:   339 EPVREQILRALTRKMRLVDDLD-FKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLLKS 397

Query:   250 ED-ETIDAE 257
                E +D E
Sbjct:   398 NSGEEMDIE 406


>UNIPROTKB|F1MIM8 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
            GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
            IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
        Length = 855

 Score = 624 (224.7 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
 Identities = 137/335 (40%), Positives = 197/335 (58%)

Query:   252 ETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQ 311
             + +  E L  + +    F  AL +  PSA RE    VPNV W DIG LE+++ EL   + 
Sbjct:   538 DPLSEEQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAIL 597

Query:   312 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 371
             + + +P++F   G+    GVL  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+ GE
Sbjct:   598 FLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 657

Query:   372 SEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             SE  VR++F +A+ SAPCV+FFDE+D++  +               +NQLLTEMDG+  +
Sbjct:   658 SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASVRV---VNQLLTEMDGLETR 714

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR---KSPVSKDVD 488
             + VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    RL I K   +   K P+  DV+
Sbjct:   715 QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 774

Query:   489 LRALAKYTQG--FSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXX 546
             L A+A   +   ++GAD++ + + A   A+++    ++ R++  SE              
Sbjct:   775 LEAIAGDLRCDCYTGADLSALVREASICALKQ----EMARQKSGSEK----------GEL 820

Query:   547 XIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQ 581
              I   HFEE+ K  + S+S  D   Y+A   +L +
Sbjct:   821 KISQKHFEEAFKKVKSSISKEDRAMYEALQWSLSR 855

 Score = 447 (162.4 bits), Expect = 2.4e-41, P = 2.4e-41
 Identities = 92/249 (36%), Positives = 145/249 (58%)

Query:   286 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 345
             +++ +V +ED+GG +   +E+ + + + + HPE +   G+ P +GVL +GPPGCGKTLLA
Sbjct:   256 LQISSVKFEDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLA 314

Query:   346 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXX 405
              AIA E     + V   E+++   GESE  +RE+F++A  SAPC+LF DE+D+I  +   
Sbjct:   315 HAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREI 374

Query:   406 XXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                         L   + +++ ++A   V +IGATNRPD +DPAL R GR D+ I + +P
Sbjct:   375 ASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 434

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 525
             DE SR +I +   RK  + +    R LA  T GF GAD+  +C+ A   A+   +   +E
Sbjct:   435 DEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL---ME 491

Query:   526 RERRRSENP 534
              + +  +NP
Sbjct:   492 LQGQHKKNP 500

 Score = 74 (31.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE-TIDAEILNSMAVTDEHFKT 271
             R +A  T G+VGADL ALC EAA+ C   ++ +++L+ +   + EI  S +  D+  +T
Sbjct:   459 RHLAHLTPGFVGADLMALCREAAM-CAVNRV-LMELQGQHKKNPEIEASPSEGDQEERT 515


>UNIPROTKB|F1MFP1 [details] [associations]
            symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
            GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
            EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
            EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
            Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
        Length = 771

 Score = 590 (212.7 bits), Expect = 7.3e-67, Sum P(3) = 7.3e-67
 Identities = 115/233 (49%), Positives = 154/233 (66%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A   HGYVGADL ALC EA L  +R    V+  +    D+++   + +T + F   + 
Sbjct:   542 QLANSAHGYVGADLKALCNEAGLHALRR---VLRRQPNLPDSKMAGLVKITLKDFLQGMN 598

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  V+VPNV+W DIGGLENVK +L++ V++P++HPE F + G+ P KGVL Y
Sbjct:   599 DIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLY 658

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VREIF KAR  AP ++FFD
Sbjct:   659 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 718

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             ELD++A +               L QLLTEMDG+   K V I+ ATNRPD ID
Sbjct:   719 ELDALAVERGSSSGAGNVADRV-LAQLLTEMDGIEQLKNVTILAATNRPDRID 770

 Score = 444 (161.4 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
 Identities = 98/298 (32%), Positives = 170/298 (57%)

Query:   234 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHF----KTALG-TSNPSALRETVVEV 288
             E + +  RE  +    E+  + +  + + + TD  +    KT +  T N +  ++   ++
Sbjct:   280 ECSFESAREGSEQPVNEERLLKSPSVGAQSNTDTFYFISSKTRVSFTKNRTNSKDQANQL 339

Query:   289 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 348
               V ++ IGGL +  +E++E ++ P++ PE F+ +G+ P +GVL YGPPG GKT++A+A+
Sbjct:   340 -KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAV 398

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
             ANE  A    + GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +      
Sbjct:   399 ANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQN 458

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                      L   LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P
Sbjct:   459 EVEKRVVASL---LTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 515

Query:   466 DEESRLQIFKACLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             + + RL I +  LR+ P +  + +L  LA    G+ GAD+  +C  A  +A+R  + +
Sbjct:   516 NAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRR 573

 Score = 80 (33.2 bits), Expect = 7.3e-67, Sum P(3) = 7.3e-67
 Identities = 30/116 (25%), Positives = 50/116 (43%)

Query:     1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVD---EAIND------DNSVVVLHPDTM 51
             ++  AE+  +  +   FS        AP  LVV    E ++D       NS+V L  +TM
Sbjct:     7 LNQSAENGSSSASAASFSKGATASAVAPGTLVVINFLEKVDDKVPKAFQNSLVQLGLNTM 66

Query:    52 EKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
             +      G  +L+     K  V  A         K+ +++V + N+ VR+GD + V
Sbjct:    67 KSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEVAQKNVGVRVGDAIHV 122

 Score = 40 (19.1 bits), Expect = 7.3e-67, Sum P(3) = 7.3e-67
 Identities = 10/49 (20%), Positives = 25/49 (51%)

Query:   172 ETDPPEYCVVAPDTEI-FCEGEPVRREDENRLDEVGYDDVGGVRKIAKD 219
             +++   +  ++  T + F +     ++  N+L +V YD +GG+    K+
Sbjct:   308 QSNTDTFYFISSKTRVSFTKNRTNSKDQANQL-KVTYDMIGGLNSQLKE 355


>UNIPROTKB|C9IZA5 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
            transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
            "polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
            binding" evidence=IEA] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
            [GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
            homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043234 GO:GO:0051260 GO:GO:0016887 GO:GO:0006919
            GO:GO:0006511 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR004201
            PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
            GO:GO:0070842 EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP
            IPI:IPI00915799 ProteinModelPortal:C9IZA5 SMR:C9IZA5 STRING:C9IZA5
            PRIDE:C9IZA5 Ensembl:ENST00000448530 HOGENOM:HOG000184195
            ArrayExpress:C9IZA5 Bgee:C9IZA5 Uniprot:C9IZA5
        Length = 160

 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 117/160 (73%), Positives = 143/160 (89%)

Query:    51 MEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQC 110
             M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C
Sbjct:     1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60

Query:   111 ADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKV 170
              DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV
Sbjct:    61 PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV 120

Query:   171 IETDPPEYCVVAPDTEIFCEGEPVRREDENR-LDEVGYDD 209
             +ETDP  YC+VAPDT I CEGEP++REDE   L+EVGYDD
Sbjct:   121 VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 160


>TAIR|locus:2084163 [details] [associations]
            symbol:CDC48C "cell division cycle 48C" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=RCA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
            evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0016571 "histone
            methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
            evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
            interference" evidence=RCA] [GO:0035196 "production of miRNAs
            involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
            "post-translational protein modification" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
            GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
            HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
            EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
            UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
            SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
            EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
            GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
            OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
            Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
        Length = 820

 Score = 648 (233.2 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
 Identities = 148/388 (38%), Positives = 213/388 (54%)

Query:   214 RKIAKDTHGYVGADLAALCTEAALQCIREKMDVI------DLEDETI------DAEILNS 261
             ++IA+ T G+VGADL ++   A  + I+  +D        D ED+          E L  
Sbjct:   436 KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEK 495

Query:   262 MAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFE 321
             + V    F+ A+     S  RE    VP+V W+D+GGL++++ +    +  P++ P+ ++
Sbjct:   496 LFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYK 555

Query:   322 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 381
              FG+    G L YGPPGCGKTL+AKA ANE  ANF+ +KG ELL  + GESE  +R +F 
Sbjct:   556 AFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQ 615

Query:   382 KARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATN 441
             +AR  APCV+FFDE+D++ T                LNQ L E+DG   ++ V++IGATN
Sbjct:   616 RARTCAPCVIFFDEVDALTTSRGKEGAWVVERL---LNQFLVELDG-GERRNVYVIGATN 671

Query:   442 RPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYT-QGFS 500
             RPD++DPA LRPGR   L+Y+PLP+ + R  I KA  RK P+   VDL  +AK   +GFS
Sbjct:   672 RPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFS 731

Query:   501 GADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYA 560
             GAD+  + Q+A   A+ E I          SE+              IK  HFE+++   
Sbjct:   732 GADLAHLVQKATFQAVEEMIGSS-----ESSEDDVTDITQCT-----IKTRHFEQALSLV 781

Query:   561 RRSVSDADIRKYQAFAQTLQQSRGFGSE 588
               SV+    R Y A +  LQ+S G  +E
Sbjct:   782 SPSVNKQQRRHYDALSTKLQESVGRNTE 809

 Score = 434 (157.8 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 101/287 (35%), Positives = 157/287 (54%)

Query:   248 DLEDETIDAEILNSMAVTD--EHFKTALGTSNPSALRETVVE-VPNVNWEDIGGLENVKR 304
             ++E ET+  +  + +A     +  K +L  S  +   +  VE      ++D GG++ +  
Sbjct:   184 NVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILD 243

Query:   305 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 364
             EL+  V +P+ +PE F+K G+ P  G+LF+GPPGCGKT LA AIANE    F  +   E+
Sbjct:   244 ELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEV 303

Query:   365 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 424
             ++   G SE N+RE+F KA ++AP ++F DE+D+I ++               + QLLT 
Sbjct:   304 ISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRI---VTQLLTC 360

Query:   425 MDGMSAK--KT--------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF 474
             MDG   K  K         V +IGATNRPD +DPAL R GR +  I +  PDE++R +I 
Sbjct:   361 MDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEIL 420

Query:   475 KACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
                 +K  +    D + +A+ T GF GAD+  +   A + AI+  ++
Sbjct:   421 SVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILD 467

 Score = 46 (21.3 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query:    75 IALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN 134
             ++ A+D  ++ + R     R   +V L   ++V Q  +V+  KRV     DD I    G+
Sbjct:    32 LSTAEDIVDDLRSRYGNFARLTRQVLL---LNVRQVLNVRNNKRVKDEDEDDNIGDEEGS 88


>WB|WBGene00003119 [details] [associations]
            symbol:mac-1 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
            junction helicase activity" evidence=IEA] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
            storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
            GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
            HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
            GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
            RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
            IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
            GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
            WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
            ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
        Length = 813

 Score = 602 (217.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 127/330 (38%), Positives = 197/330 (59%)

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
             +D +  +E+   + ++ E F+ AL T  P+A RE    VP+V+W+DIG L  V+++L+ +
Sbjct:   489 DDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWS 548

Query:   310 VQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 368
             + YP++  + F   G+    +G+L  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+
Sbjct:   549 ILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMY 608

Query:   369 FGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGM 428
              GESE  VR +F +AR S PCV+FFDE+D++  +               +NQLLTEMDG+
Sbjct:   609 VGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARL---VNQLLTEMDGV 665

Query:   429 SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKS--PV-SK 485
               ++ VF+IGATNRPDI+D A+LRPGRLD+++++  P  E R+ I +   +    P+  +
Sbjct:   666 EGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGE 725

Query:   486 DVDLRALAKYTQ--GFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXX 543
             D+D   +A+  +  GF+GAD+  +   +   A++  + ++ E  +               
Sbjct:   726 DIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK--------------- 770

Query:   544 XXXXIKAVHFEESMKYARRSVSDADIRKYQ 573
                 +   HF E+    R SV++AD +KY+
Sbjct:   771 ---GVGMRHFREAASRIRPSVTEADRKKYE 797

 Score = 222 (83.2 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
 Identities = 40/111 (36%), Positives = 69/111 (62%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V +E IGG +    E+     + ++ P+ F   G+ P +G + +GPPGCGKT+ A+A+A
Sbjct:   202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
              E     + +   EL++   GE+E  +R +FD A+Q++PC+L  D++D+IA
Sbjct:   261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311

 Score = 155 (59.6 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query:   434 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF-KACLRKSPVSKDVDLRAL 492
             V +IG T+RPD +D  L R GR +  I + +PDE +R +I  K C  K  ++ DV L+ +
Sbjct:   371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC--KVNLAGDVTLKQI 428

Query:   493 AKYTQGFSGADITEICQRACKYAI 516
             AK T G+ GAD+  + + A K AI
Sbjct:   429 AKLTPGYVGADLQALIREAAKVAI 452

 Score = 88 (36.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 32/97 (32%), Positives = 46/97 (47%)

Query:   191 GEPVRREDENRLDEVGYDDVGG---VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVI 247
             G P     E  L+++   ++ G   +++IAK T GYVGADL AL  EAA   I    D I
Sbjct:   400 GIPDETAREKILEKICKVNLAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTI 459

Query:   248 DLEDETI-DAEILNSMAVTDEHFKTALGTSNPSALRE 283
              +++E   +  +       D       G  +PSAL E
Sbjct:   460 VVKNEGHKNLTVEQIKEELDRVLAWLQGDDDPSALSE 496


>UNIPROTKB|Q9NAG4 [details] [associations]
            symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
            elegans" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
            GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
            GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
            EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
            ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
            PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
            KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
            InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
        Length = 813

 Score = 602 (217.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 127/330 (38%), Positives = 197/330 (59%)

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
             +D +  +E+   + ++ E F+ AL T  P+A RE    VP+V+W+DIG L  V+++L+ +
Sbjct:   489 DDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWS 548

Query:   310 VQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 368
             + YP++  + F   G+    +G+L  GPPGCGKTLLAKA+ANE   NFISVKGPELL M+
Sbjct:   549 ILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMY 608

Query:   369 FGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGM 428
              GESE  VR +F +AR S PCV+FFDE+D++  +               +NQLLTEMDG+
Sbjct:   609 VGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARL---VNQLLTEMDGV 665

Query:   429 SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKS--PV-SK 485
               ++ VF+IGATNRPDI+D A+LRPGRLD+++++  P  E R+ I +   +    P+  +
Sbjct:   666 EGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGE 725

Query:   486 DVDLRALAKYTQ--GFSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXX 543
             D+D   +A+  +  GF+GAD+  +   +   A++  + ++ E  +               
Sbjct:   726 DIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK--------------- 770

Query:   544 XXXXIKAVHFEESMKYARRSVSDADIRKYQ 573
                 +   HF E+    R SV++AD +KY+
Sbjct:   771 ---GVGMRHFREAASRIRPSVTEADRKKYE 797

 Score = 222 (83.2 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
 Identities = 40/111 (36%), Positives = 69/111 (62%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V +E IGG +    E+     + ++ P+ F   G+ P +G + +GPPGCGKT+ A+A+A
Sbjct:   202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 400
              E     + +   EL++   GE+E  +R +FD A+Q++PC+L  D++D+IA
Sbjct:   261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311

 Score = 155 (59.6 bits), Expect = 5.5e-26, Sum P(2) = 5.5e-26
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query:   434 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF-KACLRKSPVSKDVDLRAL 492
             V +IG T+RPD +D  L R GR +  I + +PDE +R +I  K C  K  ++ DV L+ +
Sbjct:   371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC--KVNLAGDVTLKQI 428

Query:   493 AKYTQGFSGADITEICQRACKYAI 516
             AK T G+ GAD+  + + A K AI
Sbjct:   429 AKLTPGYVGADLQALIREAAKVAI 452

 Score = 88 (36.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 32/97 (32%), Positives = 46/97 (47%)

Query:   191 GEPVRREDENRLDEVGYDDVGG---VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVI 247
             G P     E  L+++   ++ G   +++IAK T GYVGADL AL  EAA   I    D I
Sbjct:   400 GIPDETAREKILEKICKVNLAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTI 459

Query:   248 DLEDETI-DAEILNSMAVTDEHFKTALGTSNPSALRE 283
              +++E   +  +       D       G  +PSAL E
Sbjct:   460 VVKNEGHKNLTVEQIKEELDRVLAWLQGDDDPSALSE 496


>UNIPROTKB|F1RQN5 [details] [associations]
            symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
            GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
            EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
            Uniprot:F1RQN5
        Length = 778

 Score = 599 (215.9 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
 Identities = 116/238 (48%), Positives = 157/238 (65%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A   HGYVGADL ALC EA L  +R    V+  +    D+++   + +T + F   + 
Sbjct:   545 QLANSAHGYVGADLKALCNEAGLYALRR---VLRKQPNLPDSKVAGLVKITLKDFLQGMN 601

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  ++VPNV+W DIGGLEN+K +L++ V++P++HPE F + G+ P KGVL Y
Sbjct:   602 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLY 661

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VREIF KAR  AP ++FFD
Sbjct:   662 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFD 721

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLR 452
             ELD++A +               L QLLTEMDG+   K V I+ ATNRPD ID  LLR
Sbjct:   722 ELDALAVERGSSSGAGNVADRV-LAQLLTEMDGIEQLKDVTILAATNRPDRIDKELLR 778

 Score = 450 (163.5 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
 Identities = 91/236 (38%), Positives = 145/236 (61%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++ IGGL +  +E++E ++ P++ PE F+ +G+SP +GVL YGPPG GKT++A+A+AN
Sbjct:   344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A    + GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +        
Sbjct:   404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 463

Query:   411 XXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 467
                    L   LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P+ 
Sbjct:   464 EKRVVASL---LTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 520

Query:   468 ESRLQIFKACLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             + RL I +  LR+ P +  + +L  LA    G+ GAD+  +C  A  YA+R  + K
Sbjct:   521 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRK 576

 Score = 62 (26.9 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
 Identities = 28/114 (24%), Positives = 46/114 (40%)

Query:     3 NQA-ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDD--------NSVVVLHPDTMEK 53
             NQ+ E+S    +   F         A   LVV   +  D        NS+V L  +TM+ 
Sbjct:    11 NQSTENSSPSASAASFPEGATASAVAAGTLVVINFLEKDDKVPKTFQNSLVQLGLNTMKS 70

Query:    54 LQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
                  G  +L+     K  V  A         K+ ++++ + N+ VR+GD + V
Sbjct:    71 ANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVRVGDAIHV 124

 Score = 40 (19.1 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query:   196 REDENRLDEVGYDDVGGVRKIAKD 219
             ++ +N+L +V YD +GG+    K+
Sbjct:   336 KDQDNQL-KVTYDMIGGLNSQLKE 358


>DICTYBASE|DDB_G0292788 [details] [associations]
            symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
            discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
            organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
            evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
            GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
            RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
            EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
            OMA:ANRIKIS Uniprot:Q54CS8
        Length = 1201

 Score = 636 (228.9 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
 Identities = 134/332 (40%), Positives = 197/332 (59%)

Query:   209 DVGG---VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL-EDETIDAEILNS--M 262
             D+G    ++ ++  T  ++ ++L AL   +++  ++  + +  +  DE    EI N   +
Sbjct:   828 DIGNTVSIKNLSIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFL 887

Query:   263 AVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEK 322
              + D+  K+        +      ++PNV+W+D+GGL NVK E+ +T+Q P+EHP  F  
Sbjct:   888 VMGDDIQKSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS 947

Query:   323 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDK 382
              G+    G+L +GPPG GKTLLAKAIA EC  NF+SVKGPEL+ M+ GESE N+REIF+K
Sbjct:   948 -GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNK 1006

Query:   383 ARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNR 442
             ARQ+ PCV+FFDELDS+A                 ++QLL E+DGM     VFIIGATNR
Sbjct:  1007 ARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRV-VSQLLAELDGMQKSSDVFIIGATNR 1065

Query:   443 PDIIDPALLRPGRLDQLIYIPLPDE-ESRLQIFKACLRKSPVSKDVDLRALAKYT-QGFS 500
             PD++D +L+RPGRLD+L+Y+ +  E E++ +I +A  RK  ++ DVDLR + +      +
Sbjct:  1066 PDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLT 1125

Query:   501 GADITEICQRACKYAIRENIEKDIERERRRSE 532
             GAD   +   A   A  E I   I  E    E
Sbjct:  1126 GADFYALASDAMSNAFHERITASINGEINEEE 1157

 Score = 49 (22.3 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query:    38 NDDNSV--VVLHPDTMEKLQFFRGDTILIKGKKRKDTVC---IALADD 80
             N++N +  V++     +KL  F  D + +K  K+K TV    + LA+D
Sbjct:   108 NNNNKLKSVLISNSCSKKLNLFNNDIVHLKPIKKKLTVLQRVVLLAND 155

 Score = 39 (18.8 bits), Expect = 2.4e-65, Sum P(3) = 2.4e-65
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:    83 EEPKIRMNKVVRSNLRVRLGDVVSV 107
             E  + ++ K +  NL + +G+ VS+
Sbjct:   811 ENQRFKILKYLTKNLPIDIGNTVSI 835


>RGD|1310478 [details] [associations]
            symbol:Spata5 "spermatogenesis associated 5" species:10116
            "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
            GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
            CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
            RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
            GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
            Uniprot:D4A6T1
        Length = 838

 Score = 587 (211.7 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
 Identities = 110/233 (47%), Positives = 154/233 (66%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A + HGYVGADL ALC EA L  +R    V+  +    D+++   + +T   F   + 
Sbjct:   551 RLANNAHGYVGADLKALCNEAGLYALRR---VLRKQPNLPDSKVAGMVKITLNDFLQGMN 607

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  ++VPNV+W DIGGLEN+K +L++ V++P++HP+ F + G+ P KGVL Y
Sbjct:   608 DIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLY 667

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+ANE   NF+++KGPEL+  + GESE  VRE+F KAR  AP ++FFD
Sbjct:   668 GPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFD 727

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             ELD++A +               L QLLTEMDG+   K V ++ ATNRPD ID
Sbjct:   728 ELDALAVERGSSSGAGNVADRV-LAQLLTEMDGIEQLKNVTVLAATNRPDRID 779

 Score = 428 (155.7 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
 Identities = 87/236 (36%), Positives = 141/236 (59%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++ IGGL +  + ++E ++ P++ PE F+ +G+   +G+L YGPPG GKT++A+A+AN
Sbjct:   350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E  A    + GPE+++ ++GE+EA +R+IF +A    P ++F DELD++  +        
Sbjct:   410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEV 469

Query:   411 XXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 467
                    L   LT MDG+ ++ +   V ++GATNRP  +D AL RPGR D+ I I +P+ 
Sbjct:   470 EKRVVASL---LTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNA 526

Query:   468 ESRLQIFKACLRKSP-VSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             + RL I +  LR+ P +    +L  LA    G+ GAD+  +C  A  YA+R  + K
Sbjct:   527 QDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRK 582

 Score = 51 (23.0 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
 Identities = 16/67 (23%), Positives = 31/67 (46%)

Query:    41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVR 100
             NS+V L  +TM+      G  +L+     K  V  A         K+ ++++ + N+ V+
Sbjct:    64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVK 123

Query:   101 LGDVVSV 107
              G+ + V
Sbjct:   124 AGETIRV 130

 Score = 44 (20.5 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query:   504 ITEICQRACKYAIRENIEKDIERER 528
             I  +C+ A   A+ ENI+ D   +R
Sbjct:   781 IIAVCKEAALLALEENIKADCIMKR 805


>UNIPROTKB|H0Y8B6 [details] [associations]
            symbol:NVL "Nuclear valosin-containing protein-like"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
            "aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
            GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
            Ensembl:ENST00000469968 Uniprot:H0Y8B6
        Length = 739

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 147/364 (40%), Positives = 209/364 (57%)

Query:   225 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 282
             G     L TE   +   E   ++ L  + + +  E +  + +    F  AL +  PSA R
Sbjct:   393 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 452

Query:   283 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 342
             E  V VPNV W DIG LE+++ EL   +  PV +P++F+  G+    GVL  GPPGCGKT
Sbjct:   453 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 512

Query:   343 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 402
             LLAKA+ANE   NFISVKGPELL M+ GESE  VR++F +A+ SAPCV+FFDE+D++  +
Sbjct:   513 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 572

Query:   403 XXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                            +NQLLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++
Sbjct:   573 RSDRETGASVRV---VNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 629

Query:   463 PLPDEESRLQIFKACLR---KSPVSKDVDLRALAKYTQG--FSGADITEICQRACKYAIR 517
              LP    RL I K   +   K P+  DV+L A+A   +   ++GAD++ + + A   A+R
Sbjct:   630 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 689

Query:   518 ENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQ 577
             +      E  R++S N              +   HFEE+ K  R S+S  D   Y+   +
Sbjct:   690 Q------EMARQKSGNEKGELK--------VSHKHFEEAFKKVRSSISKKDQIMYERLQE 735

Query:   578 TLQQ 581
             +L +
Sbjct:   736 SLSR 739

 Score = 455 (165.2 bits), Expect = 1.6e-42, P = 1.6e-42
 Identities = 92/246 (37%), Positives = 145/246 (58%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             ++ NV +ED+GG +   +E+ + + + + HPE +   G+ P +GVL +GPPGCGKTLLA 
Sbjct:   141 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 199

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             AIA E     + V  PE+++   GESE  +RE+F++A  +APC++F DE+D+I  +    
Sbjct:   200 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 259

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        L   + +++ ++A   V +IGATNRPD +DPAL R GR D+ I + +PD
Sbjct:   260 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 319

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIER 526
             E SR +I +   RK  + +  D   LA  T GF GAD+  +C+ A   A+   + K  E+
Sbjct:   320 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ 379

Query:   527 ERRRSE 532
             +++  E
Sbjct:   380 QKKNPE 385


>UNIPROTKB|O15381 [details] [associations]
            symbol:NVL "Nuclear valosin-containing protein-like"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
            "aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
            eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
            EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
            EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
            RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
            RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
            ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
            MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
            SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
            Ensembl:ENST00000281701 Ensembl:ENST00000340871
            Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
            KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
            HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
            PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
            OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
            EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
            ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
            Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
        Length = 856

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 147/364 (40%), Positives = 209/364 (57%)

Query:   225 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 282
             G     L TE   +   E   ++ L  + + +  E +  + +    F  AL +  PSA R
Sbjct:   510 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 569

Query:   283 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 342
             E  V VPNV W DIG LE+++ EL   +  PV +P++F+  G+    GVL  GPPGCGKT
Sbjct:   570 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629

Query:   343 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 402
             LLAKA+ANE   NFISVKGPELL M+ GESE  VR++F +A+ SAPCV+FFDE+D++  +
Sbjct:   630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689

Query:   403 XXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                            +NQLLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++
Sbjct:   690 RSDRETGASVRV---VNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746

Query:   463 PLPDEESRLQIFKACLR---KSPVSKDVDLRALAKYTQG--FSGADITEICQRACKYAIR 517
              LP    RL I K   +   K P+  DV+L A+A   +   ++GAD++ + + A   A+R
Sbjct:   747 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 806

Query:   518 ENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQ 577
             +      E  R++S N              +   HFEE+ K  R S+S  D   Y+   +
Sbjct:   807 Q------EMARQKSGNEKGELK--------VSHKHFEEAFKKVRSSISKKDQIMYERLQE 852

Query:   578 TLQQ 581
             +L +
Sbjct:   853 SLSR 856

 Score = 455 (165.2 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 92/246 (37%), Positives = 145/246 (58%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             ++ NV +ED+GG +   +E+ + + + + HPE +   G+ P +GVL +GPPGCGKTLLA 
Sbjct:   258 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             AIA E     + V  PE+++   GESE  +RE+F++A  +APC++F DE+D+I  +    
Sbjct:   317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 376

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        L   + +++ ++A   V +IGATNRPD +DPAL R GR D+ I + +PD
Sbjct:   377 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 436

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIER 526
             E SR +I +   RK  + +  D   LA  T GF GAD+  +C+ A   A+   + K  E+
Sbjct:   437 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ 496

Query:   527 ERRRSE 532
             +++  E
Sbjct:   497 QKKNPE 502


>UNIPROTKB|E7ERY0 [details] [associations]
            symbol:NVL "Nuclear valosin-containing protein-like"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
            IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
            Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
            Uniprot:E7ERY0
        Length = 580

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 147/364 (40%), Positives = 209/364 (57%)

Query:   225 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 282
             G     L TE   +   E   ++ L  + + +  E +  + +    F  AL +  PSA R
Sbjct:   234 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 293

Query:   283 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 342
             E  V VPNV W DIG LE+++ EL   +  PV +P++F+  G+    GVL  GPPGCGKT
Sbjct:   294 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 353

Query:   343 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 402
             LLAKA+ANE   NFISVKGPELL M+ GESE  VR++F +A+ SAPCV+FFDE+D++  +
Sbjct:   354 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 413

Query:   403 XXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                            +NQLLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++
Sbjct:   414 RSDRETGASVRV---VNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 470

Query:   463 PLPDEESRLQIFKACLR---KSPVSKDVDLRALAKYTQG--FSGADITEICQRACKYAIR 517
              LP    RL I K   +   K P+  DV+L A+A   +   ++GAD++ + + A   A+R
Sbjct:   471 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 530

Query:   518 ENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQAFAQ 577
             +      E  R++S N              +   HFEE+ K  R S+S  D   Y+   +
Sbjct:   531 Q------EMARQKSGNEKGELK--------VSHKHFEEAFKKVRSSISKKDQIMYERLQE 576

Query:   578 TLQQ 581
             +L +
Sbjct:   577 SLSR 580

 Score = 300 (110.7 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 63/184 (34%), Positives = 102/184 (55%)

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
             + E     + V  PE+++   GESE  +RE+F++A  +APC++F DE+D+I  +      
Sbjct:    43 SRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASK 102

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 468
                      L   + +++ ++A   V +IGATNRPD +DPAL R GR D+ I + +PDE 
Sbjct:   103 DMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 162

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERER 528
             SR +I +   RK  + +  D   LA  T GF GAD+  +C+ A   A+   + K  E+++
Sbjct:   163 SRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQK 222

Query:   529 RRSE 532
             +  E
Sbjct:   223 KNPE 226


>FB|FBgn0016983 [details] [associations]
            symbol:smid "smallminded" species:7227 "Drosophila
            melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
            KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
            KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
            NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
            SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
            PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
            InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
            Bgee:Q9VS62 Uniprot:Q9VS62
        Length = 944

 Score = 648 (233.2 bits), Expect = 3.1e-63, P = 3.1e-63
 Identities = 134/307 (43%), Positives = 190/307 (61%)

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
             F  A+    PSA RE  + VP+  W+DIG LE ++ EL+  V  PV++PE  E+ G++  
Sbjct:   637 FVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAP 696

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
              GVL  GPPGCGKTLLAKAIANE   NFISVKGPEL+ M+ GESE  VR  F +AR SAP
Sbjct:   697 SGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAP 756

Query:   389 CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 448
             CV+FFDE DS+  +               +NQLLTEMDG+  +K V+I+ ATNRPDIIDP
Sbjct:   757 CVIFFDEFDSLCPKRSDGGDGNNSGTRI-VNQLLTEMDGVEERKGVYILAATNRPDIIDP 815

Query:   449 ALLRPGRLDQLIYIPLPDEESRLQIFKACLR--KSPV-SKDVDLRALAKYTQGFSGADIT 505
             A+LRPGRLD ++Y+  P++  R +I KA  +  K PV + DVDL  +A  T+G++GAD+ 
Sbjct:   816 AILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLA 875

Query:   506 EICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVS 565
              + ++A  +++R+++                           +++ HF+E+++  R SV+
Sbjct:   876 GLVKQASMFSLRQSLNNG----------------DTNLDDLCVRSQHFQEALQQLRPSVN 919

Query:   566 DADIRKY 572
             + D + Y
Sbjct:   920 EQDRKIY 926

 Score = 393 (143.4 bits), Expect = 8.0e-34, P = 8.0e-34
 Identities = 85/254 (33%), Positives = 140/254 (55%)

Query:   282 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 341
             R+  V+ P  ++ DIGG+++  +EL E + + ++ PE + + G+ PS+G+L +GPPGCGK
Sbjct:   239 RDLEVQHPTESFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGK 297

Query:   342 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 401
             T LA+AI+ + +   + +   EL+    GESE  +RE+FD+A   +PCVLF DE+D+I  
Sbjct:   298 TFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGG 357

Query:   402 QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKK---TVFIIGATNRPDIIDPALLRPGRLDQ 458
                             ++QL++ +D + A +   +V +I AT RPD++DP L R GR D 
Sbjct:   358 NRQWASKDMERRI---VSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDH 414

Query:   459 LIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
              I I +P  + R +I +       V   ++   +A+ T G+ GAD+  +  RA   A++ 
Sbjct:   415 EIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKR 474

Query:   519 NIEKDIERERRRSE 532
                K        SE
Sbjct:   475 RSMKKFRELHAASE 488


>WB|WBGene00010562 [details] [associations]
            symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0040010 "positive regulation of growth
            rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
            or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0007091
            "metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
            binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0006469 "negative regulation of protein kinase activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
            "ATP catabolic process" evidence=IDA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
            GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
            GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
            eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
            GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
            ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
            EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
            UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
            OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
        Length = 724

 Score = 609 (219.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
 Identities = 112/248 (45%), Positives = 166/248 (66%)

Query:   278 PSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 337
             P+ +R+ ++EVPNV+W DIGG E +K E+Q+ V +P +HPE FE+FG+ P  G+L YGPP
Sbjct:   443 PTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPP 502

Query:   338 GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 397
             GC KTL+A+A+A+E + NF++VKGPEL + W G+SE  +R++F +ARQ AP ++FFDE+D
Sbjct:   503 GCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEID 562

Query:   398 SIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLD 457
             ++ +                L QLLTE+DG+     V ++ ATNRPD +D ALLRPGRLD
Sbjct:   563 AVGSSRGSEKSSGVSDRV--LAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLD 620

Query:   458 QLIYIPLPDEESRLQIFKACLRKSPVSKDV-DLRALAKYTQGFSGADITEICQRACKYAI 516
             + IY+ LP E +R  I +   +K      V  +  L + T G+SGA++  +C+ A  +A+
Sbjct:   621 RAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAM 680

Query:   517 RENIEKDI 524
             RE+I+  I
Sbjct:   681 RESIDATI 688

 Score = 52 (23.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query:   216 IAKDTHGYVGADLAALCTEA 235
             +A+ THG+ G DL +L   A
Sbjct:   403 VARHTHGFTGGDLCSLLKAA 422


>DICTYBASE|DDB_G0282241 [details] [associations]
            symbol:DDB_G0282241 species:44689 "Dictyostelium
            discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
            GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
            ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
            KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
        Length = 825

 Score = 617 (222.3 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
 Identities = 128/339 (37%), Positives = 206/339 (60%)

Query:   186 EIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMD 245
             +++C   P+     N LD+           IA +T GYVGA++  LC ++A      K +
Sbjct:   471 KLYCSKLPISPTPSNLLDQ-----------IADETVGYVGANIQFLCRDSAFIAF-SKYN 518

Query:   246 VIDLED-ETIDAEILNSMAVTDEHFKTALGTSNPSALR-ETVVE-VPNVNWEDIGGLENV 302
             ++  ++ E  + E      +  E F+ ++  +  S L+ E +VE + NV+W+DIGGL+++
Sbjct:   519 LLKYQNNEQNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIGGLDDI 578

Query:   303 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 362
             K EL++ +++P  + E FEKFG+SP KG++ YGPPGC KT L KA+A+  + +F+S+ G 
Sbjct:   579 KEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGA 638

Query:   363 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXX-LNQL 421
              + + + G+SE  +R+IF KARQ+ P +LFFDE+D+I ++                L+  
Sbjct:   639 TIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTF 698

Query:   422 LTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKS 481
             L EMDG+     V +IGATNR D+ID ALLRPGR D+++ I LPD+ SRL+I K   +  
Sbjct:   699 LNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSI 758

Query:   482 PVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
             P+S +V+L  ++  T GFSGAD+  +C+ A   ++R ++
Sbjct:   759 PLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDL 797

 Score = 368 (134.6 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
 Identities = 92/254 (36%), Positives = 139/254 (54%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N N++ IGGL    + L+E + YP+  P+ F+   + P KG+L  GPPG GKT L + + 
Sbjct:   284 NNNFK-IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVC 342

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIF----DK--ARQSAPCVLFFDELDSIATQX 403
             +      IS+   ++   + GE+E N+R IF    DK  A+ ++P V+F DE+D+I    
Sbjct:   343 DAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPR 402

Query:   404 XXXXXXXXXXXXXXLNQLLTEMDGMSAKK-TVFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                           + Q LT +DG+ A+K  + II ATNRP+ ID AL RPGRLD+ I I
Sbjct:   403 SKSTQNESRV----VGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEI 458

Query:   463 PLPDEESRLQIFKACLRKSPVSKDVD--LRALAKYTQGFSGADITEICQRACKYAIRE-N 519
             P+P+++ RL I K    K P+S      L  +A  T G+ GA+I  +C+ +   A  + N
Sbjct:   459 PVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYN 518

Query:   520 IEKDIERERRRSEN 533
             + K    E+  +EN
Sbjct:   519 LLKYQNNEQNENEN 532

 Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query:    41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRK 70
             N +  +    MEKL    GD I I  +K++
Sbjct:    48 NELCYMSIQLMEKLSLKLGDWIFIDVQKQQ 77


>TAIR|locus:2007574 [details] [associations]
            symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
            [GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
            GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
            eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
            EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
            PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
            ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
            PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
            KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
            HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
            PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
            Uniprot:Q8RY16
        Length = 941

 Score = 618 (222.6 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
 Identities = 151/386 (39%), Positives = 216/386 (55%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCI----REKMDVIDLEDET--ID----AEILNSM 262
             ++ +   T G++  DL AL  +A          E   +  L D+   +D    ++I NS 
Sbjct:   564 MKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNST 623

Query:   263 A--VTDEHFKTALGTS---NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHP 317
                   E F  AL  S   N SAL     +VPNV W+D+GGLE+VK  + +TVQ P+ H 
Sbjct:   624 EKLTAKEDFTKALDRSKKRNASALGAP--KVPNVKWDDVGGLEDVKTSILDTVQLPLLHK 681

Query:   318 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 377
             + F   G+    GVL YGPPG GKTLLAKA+A EC  NF+SVKGPEL+ M+ GESE NVR
Sbjct:   682 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 740

Query:   378 EIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS-AKKTVFI 436
             +IF+KAR + PCV+FFDELDS+A                 ++Q+L E+DG+S + + +FI
Sbjct:   741 DIFEKARSARPCVIFFDELDSLAP-ARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFI 799

Query:   437 IGATNRPDIIDPALLRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDLRALAKY 495
             IGA+NRPD+IDPALLRPGR D+L+Y+ +  D   R ++ KA  RK  +S+DV L ++AK 
Sbjct:   800 IGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKK 859

Query:   496 TQG-FSGADITEICQRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFE 554
                 F+GAD+  +C  A   A +  + K    +    E+              ++ V F 
Sbjct:   860 CPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVV--------VEYVDFI 911

Query:   555 ESMKYARRSVSDADIRKYQAFAQTLQ 580
             ++M     S+S  +++KY+      Q
Sbjct:   912 KAMDQLSPSLSITELKKYEMLRDQFQ 937

 Score = 46 (21.3 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query:    11 KGTKRDFSTAILE-RKKAPNRLVVDEAIN--DDNSVVVLHPDTMEKLQFFRGDTILIK 65
             +G  R  S  IL  RK   N  V D  ++  DD+++V L    +++L    G  +++K
Sbjct:    43 RGNAR-LSAGILRWRKDGEN--VSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVK 97


>UNIPROTKB|E2QY79 [details] [associations]
            symbol:NVL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
            EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
            Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
        Length = 851

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 134/295 (45%), Positives = 183/295 (62%)

Query:   233 TEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPN 290
             TE A +   E   +++L    + +  E L  + +    F  AL +  PSA RE  V VP+
Sbjct:   512 TEPASETPDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPS 571

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V W DIG LE+++ EL   +  PV  PE+F   G+    GVL  GPPGCGKTLLAKA+AN
Sbjct:   572 VTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVAN 631

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E   NFISVKGPELL M+ GESE  VR++F +AR SAPCV+FFDE+D++  +        
Sbjct:   632 ESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGA 691

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    +NQLLTEMDG+ A++ VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP    R
Sbjct:   692 SVRV---VNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADR 748

Query:   471 LQIFKACLR---KSPVSKDVDLRALAKYTQG--FSGADITEICQRACKYAIRENI 520
             L I K   +   + P+  DV+L ALA   +   +SGAD++ + + A   A+R+ +
Sbjct:   749 LAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEM 803

 Score = 430 (156.4 bits), Expect = 1.6e-39, P = 1.6e-39
 Identities = 90/231 (38%), Positives = 134/231 (58%)

Query:   286 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 345
             ++V  V +ED+GG +   +E+ + + + + HPE +   G  P +GVL +GPPGCGKTLLA
Sbjct:   251 LQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLA 309

Query:   346 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXX 405
              AIA E     + V   E+++   GESE  +RE+F++A  +APCVLF DE+D+I  +   
Sbjct:   310 HAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREV 369

Query:   406 XXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                         L   + +++  +A   V +IGATNRPD +DPAL R GR D+ I + +P
Sbjct:   370 ASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 429

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
             DE SR +I +   RK  + +    R LA  T GF GAD+  +C+ A   A+
Sbjct:   430 DEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480


>TAIR|locus:2044209 [details] [associations]
            symbol:CDC48B "cell division cycle 48B" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
            eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
            GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
            PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
            ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
            EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
            GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
            PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
            GermOnline:AT2G03670 Uniprot:Q9ZPR1
        Length = 603

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 128/318 (40%), Positives = 189/318 (59%)

Query:   204 EVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMA 263
             +V  D    ++ IA   +GYVGADL ALC EA +   +   D               S+ 
Sbjct:   211 KVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSD---------------SLI 255

Query:   264 VTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKF 323
             +T + FK A     PS  R   VE+P V W+D+GGL+++K++LQ+ V++P++H   F K 
Sbjct:   256 LTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKM 315

Query:   324 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKA 383
             G+SP +G+L +GPPGC KT LAKA AN  QA+F S+   EL +M+ GE EA +R  F +A
Sbjct:   316 GISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRA 375

Query:   384 RQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXL-NQLLTEMDGMSAKKTVFIIGATNR 442
             R ++P ++FFDE D +A +               L + LLTEMDG+   K + ++ ATNR
Sbjct:   376 RLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNR 435

Query:   443 PDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGA 502
             P  ID AL+RPGR D ++Y+P PD E+R +I +   R   +  DVDLR +A+ T  F+GA
Sbjct:   436 PYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGA 495

Query:   503 DITEICQRACKYAIRENI 520
             ++  +C+ +   ++RENI
Sbjct:   496 ELEGLCRESGTVSLRENI 513

 Score = 340 (124.7 bits), Expect = 3.3e-28, P = 3.3e-28
 Identities = 81/232 (34%), Positives = 120/232 (51%)

Query:   290 NVNWE---DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             N  W    +IGG E   + L+E + +P  +P +    G+   +G+L YGPPG GKT L +
Sbjct:    15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 402
             A+  EC A+ I +    +     GESE  +RE F +A   A    P V+F DE+D +  +
Sbjct:    75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134

Query:   403 XXXXXXXXXXXXXXXLNQLLTEMDG---MSAKKTVFIIGATNRPDIIDPALLRPGRLDQL 459
                             +QL T MD     S+   V ++ +TNR D IDPAL R GR D L
Sbjct:   135 RDARREQDVRIA----SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDAL 190

Query:   460 IYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             + +  P+EE RL+I +   +K  +   VDL+A+A    G+ GAD+  +C+ A
Sbjct:   191 VEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREA 242


>ASPGD|ASPL0000034610 [details] [associations]
            symbol:pexF species:162425 "Emericella nidulans"
            [GO:0006631 "fatty acid metabolic process" evidence=IMP]
            [GO:0006625 "protein targeting to peroxisome" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
            aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
            matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
            EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
        Length = 1476

 Score = 576 (207.8 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
 Identities = 119/236 (50%), Positives = 156/236 (66%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             ++PNV+WED+GGL NVK  L ET+Q P+E PE F K GM    G+LFYGPPG GKTLLAK
Sbjct:  1018 KIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1076

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             AIA E   NF SVKGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +    
Sbjct:  1077 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQ 1136

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                        ++QLL E+DGM+  +     VF+IGATNRPD++D ALLRPGR D+++Y+
Sbjct:  1137 GDSGGVMDRI-VSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYL 1195

Query:   463 PLPD-EESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITEICQRACKYAI 516
              + D  E +  I +A  RK  ++ D+ L R   +    ++GAD+  +C  A   AI
Sbjct:  1196 GVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAI 1251

 Score = 56 (24.8 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query:    25 KKAPNRLVVDEAINDDN--SVVVLHPDTMEKLQFFRGDTILIKGKK 68
             ++ PN L+  +  +DD+  +VV +   T+ K+  F GD + I+  +
Sbjct:   423 RRVPNELLYPKPRDDDDVEAVVFVDISTLAKIGCFSGDWVRIEASE 468

 Score = 43 (20.2 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query:   135 LFDAYLKPYFTEAYRPVRKGDL 156
             LF A LK YF    R ++ GDL
Sbjct:   603 LFSA-LKQYFESKRRLLKSGDL 623

 Score = 40 (19.1 bits), Expect = 8.3e-61, Sum P(4) = 8.3e-61
 Identities = 20/90 (22%), Positives = 38/90 (42%)

Query:    67 KKRKDTVCIALADDTCE-EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
             K+R+  +  A+++ + +  P + +  V      +  GD+V V + A V    R+  L   
Sbjct:   909 KEREGILRNAVSERSIKLAPDVDLGTVALKTAALVAGDLVDVVERASVARSTRLEKLAES 968

Query:   126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGD 155
              + +  T  +    +     EA R V K D
Sbjct:   969 ASKQSPTSKITVRDVLLAGGEAVRGVTKAD 998

 Score = 38 (18.4 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query:   201 RLDEVGYDDVGGVRKIAKD 219
             ++  V ++DVGG+  + KD
Sbjct:  1018 KIPNVSWEDVGGLTNV-KD 1035


>UNIPROTKB|Q58576 [details] [associations]
            symbol:pan "Proteasome-activating nucleotidase"
            species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
            "GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
            evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
            "proteasome-activating nucleotidase complex" evidence=IDA]
            [GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
            unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
            GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
            GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
            PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
            ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
            KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
            ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
            TIGRFAMs:TIGR01242 Uniprot:Q58576
        Length = 430

 Score = 603 (217.3 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 119/234 (50%), Positives = 157/234 (67%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E PNV +EDIGGLE   +E++E V+ P++HPE FEK G+ P KG+L YGPPG GKTLL
Sbjct:   161 VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLL 220

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             AKA+A E  A FI V G EL+  + GE  + V++IF  A++ AP ++F DE+D+IA +  
Sbjct:   221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRT 280

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          L QLL EMDG  A+  V IIGATNRPDI+DPA+LRPGR D++I +P 
Sbjct:   281 DALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPA 340

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
             PDE+ RL+I K   RK  +++DV+L  +AK T+G  GA++  IC  A   AIRE
Sbjct:   341 PDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRE 394

 Score = 38 (18.4 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 6/11 (54%), Positives = 9/11 (81%)

Query:   205 VGYDDVGGVRK 215
             V Y+D+GG+ K
Sbjct:   167 VRYEDIGGLEK 177


>POMBASE|SPAC17A5.01 [details] [associations]
            symbol:pex6 "peroxin-6 (predicted)" species:4896
            "Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
            organization" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
            GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
            RefSeq:NP_593468.1 ProteinModelPortal:O13764
            EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
            OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
        Length = 948

 Score = 610 (219.8 bits), Expect = 7.9e-61, Sum P(2) = 7.9e-61
 Identities = 139/351 (39%), Positives = 201/351 (57%)

Query:   237 LQCIREKMD--VIDLEDET---IDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 291
             L+C+ + M    +D    T    D+ IL+   +T++    ++          T+  VP V
Sbjct:   594 LECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSINRIRKEK-SNTIFTVPKV 652

Query:   292 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 351
             NW+DIGGLE  K  L++T+Q P++ PE F + G+ P  GVL YGPPG GKTLLAKA+A E
Sbjct:   653 NWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATE 711

Query:   352 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXX 411
                 F+S+KGPELL M+ GESEANVR +F+KAR S+PCV+FFDELDSIA           
Sbjct:   712 LSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGN 771

Query:   412 XXXXXXLNQLLTEMDGMSA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PDEE 468
                   ++QLL E+D +S    K VF+IGATNRPD++DP+LLRPGR D+L+Y+ +   EE
Sbjct:   772 VMDRV-VSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEE 830

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQ-GFSGADITEICQRACKYAI-RENIEKDIER 526
             S+  + +A  +   + + +DL  +AK     F+GAD+  +C  A   AI R+  E D+  
Sbjct:   831 SKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLI 890

Query:   527 ERR----RSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRKYQ 573
             +       +E               I    F  S+K  R S+S+ ++ +Y+
Sbjct:   891 QASGTDLSTEEFFKRNENQDSLELRITKEDFLTSLKKLRPSISEQELHRYE 941

 Score = 41 (19.5 bits), Expect = 7.9e-61, Sum P(2) = 7.9e-61
 Identities = 22/81 (27%), Positives = 34/81 (41%)

Query:    20 AILERKKAPNRLVVD-EAINDDNSVVVLHP------DTMEKLQFFRGDTILIKGKKRKDT 72
             AI+ER K  N ++++ + IN +  V V  P      D+  K    R D+        K+ 
Sbjct:   108 AIIERIKGRNAILMESDFINQNILVQVCQPVRHGVVDSETKFVIERKDSFTFLASNEKNI 167

Query:    73 VCIALAD-DTCEEPKIRMNKV 92
                     +T  E  IR +KV
Sbjct:   168 SSFKRGKTETDAELVIRPSKV 188


>ZFIN|ZDB-GENE-081104-252 [details] [associations]
            symbol:pex6 "peroxisomal biogenesis factor 6"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
            GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
            EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
            Bgee:F1QMB0 Uniprot:F1QMB0
        Length = 1071

 Score = 630 (226.8 bits), Expect = 8.3e-61, P = 8.3e-61
 Identities = 145/371 (39%), Positives = 213/371 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE--DETIDAEI-LNSMAVTDEHFKT 271
             +IAK T G+V  DL AL T A     R  ++    E   E  + ++ ++ ++VT E F  
Sbjct:   713 RIAKQTAGFVLGDLCALLTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSA 772

Query:   272 ALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 330
             AL     +  +     ++P V+W+D+GGL+ VK+E+ +T+Q P+EHPE     G+  S G
Sbjct:   773 ALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLS-LGLRRS-G 830

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             +L YGPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE N+R++  KAR +APC+
Sbjct:   831 LLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCI 890

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             +FFDELDS+A                 ++QLL E+DG+ +   VF+IGATNRPD++D +L
Sbjct:   891 IFFDELDSLAPNRGHSGDSGGVMDRV-VSQLLAELDGLHSSGDVFVIGATNRPDLLDQSL 949

Query:   451 LRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQG-FSGADITEIC 508
             LRPGR D+L+Y+ +  D ES+LQ+ KA LRK  V   V L  + +      +GAD+  +C
Sbjct:   950 LRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLC 1009

Query:   509 QRACKYAIRENIEKDIERERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDAD 568
               A   A++  I +  E     SE               + +  F E++   + SVS+  
Sbjct:  1010 SDAMMCAVKRKISRITEGVD--SE----------LSSLTLCSEDFSEALSGLQPSVSEQQ 1057

Query:   569 IRKYQAFAQTL 579
             I +YQ   Q L
Sbjct:  1058 ISRYQLLQQKL 1068

 Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 58/269 (21%), Positives = 105/269 (39%)

Query:   255 DAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIG--GLENVKRELQETVQY 312
             + E  +S      H    +G S  S    +V+   +  W  +   GL +   +L   +Q 
Sbjct:   488 EEEEASSYLADSSHTSLYMGGSAHSLCPYSVLPEASSFWTSLSPPGLSSTVEKLITIIQP 547

Query:   313 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 372
              +       K G S    +L  GP G GK    +A++     + I V    L       S
Sbjct:   548 HLNESTLILKRGCS----ILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAAS 603

Query:   373 EANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKK 432
             EA ++ +F++A    PC+L    L  +                  L QL+      +   
Sbjct:   604 EAKIKSVFERAELHHPCLLLLRNLQLLGQSRDGAETDCRVAAT--LCQLIA-----AVHT 656

Query:   433 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRAL 492
             +V ++G+ +    + P+ +    + Q+    L +++ R+ +  +      + KDV+L  +
Sbjct:   657 SVVVVGSVSSQHEL-PSDVMAAFVHQVAIESLSEDQRRM-VLSSLSEDLLLGKDVNLGRI 714

Query:   493 AKYTQGFSGADITEICQRACKYAIRENIE 521
             AK T GF   D+  +   A K A R  +E
Sbjct:   715 AKQTAGFVLGDLCALLTNAGKAAHRRLVE 743


>CGD|CAL0002247 [details] [associations]
            symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
            "ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
            import into peroxisome matrix, receptor recycling"
            evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
            membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
            evidence=IEA] [GO:0004675 "transmembrane receptor protein
            serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
            activity, coupled" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
            InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
            SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
            GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
            InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
            EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
            PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
            RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
            GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
            KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
        Length = 1091

 Score = 605 (218.0 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
 Identities = 127/318 (39%), Positives = 187/318 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +  +T GY+  DL  L      + +    +  + E ET + E   + AVT EH + AL  
Sbjct:   661 LVSETEGYLPNDLKILSDRIYHEVL---FNSTETETET-ETEATTNAAVTSEHIEKALAG 716

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
               PS LR   ++  ++NW DIGGL+  K  L ET+++P ++   F    +    G+L YG
Sbjct:   717 YTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYG 776

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
              PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE +VRE+F++A+ + PC+LFFDE
Sbjct:   777 YPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDE 836

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
              DSIA +               +NQ+LT+MDG      V+++ AT+RPD+ID ALLRPGR
Sbjct:   837 FDSIAPKRGHDSTGVTDRV---VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGR 893

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             LD+ +   +P+ E RL I ++   K  +S DV+L  +A+ T GFSGAD+  +   A   A
Sbjct:   894 LDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKA 953

Query:   516 IRENIEKDIERERRRSEN 533
             +   +E+  +RE+  + N
Sbjct:   954 VHVTLEELSQREQDEANN 971

 Score = 48 (22.0 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
 Identities = 11/63 (17%), Positives = 29/63 (46%)

Query:    90 NKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYR 149
             NK+ +    +    + S+      K     ++LP    +     + ++A++KPY  ++ +
Sbjct:   379 NKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDSKK 438

Query:   150 PVR 152
             P++
Sbjct:   439 PIK 441


>UNIPROTKB|Q5AH73 [details] [associations]
            symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
            species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0016562 "protein import into peroxisome matrix, receptor
            recycling" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] [GO:0046982 "protein heterodimerization activity"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
            GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
            SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
            GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
            RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
            STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
            KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
            Uniprot:Q5AH73
        Length = 1091

 Score = 605 (218.0 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
 Identities = 127/318 (39%), Positives = 187/318 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +  +T GY+  DL  L      + +    +  + E ET + E   + AVT EH + AL  
Sbjct:   661 LVSETEGYLPNDLKILSDRIYHEVL---FNSTETETET-ETEATTNAAVTSEHIEKALAG 716

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
               PS LR   ++  ++NW DIGGL+  K  L ET+++P ++   F    +    G+L YG
Sbjct:   717 YTPSNLRGVKLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYG 776

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
              PGCGKTLLA AIA +C  NFIS+KGPE+L  + G SE +VRE+F++A+ + PC+LFFDE
Sbjct:   777 YPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDE 836

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
              DSIA +               +NQ+LT+MDG      V+++ AT+RPD+ID ALLRPGR
Sbjct:   837 FDSIAPKRGHDSTGVTDRV---VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGR 893

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             LD+ +   +P+ E RL I ++   K  +S DV+L  +A+ T GFSGAD+  +   A   A
Sbjct:   894 LDKSVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKA 953

Query:   516 IRENIEKDIERERRRSEN 533
             +   +E+  +RE+  + N
Sbjct:   954 VHVTLEELSQREQDEANN 971

 Score = 48 (22.0 bits), Expect = 2.4e-60, Sum P(2) = 2.4e-60
 Identities = 11/63 (17%), Positives = 29/63 (46%)

Query:    90 NKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYR 149
             NK+ +    +    + S+      K     ++LP    +     + ++A++KPY  ++ +
Sbjct:   379 NKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRKNDEYNAWIKPYNLDSKK 438

Query:   150 PVR 152
             P++
Sbjct:   439 PIK 441


>UNIPROTKB|F1NYD5 [details] [associations]
            symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
            "peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
            "protein import into peroxisome matrix, translocation"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
            "protein stabilization" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
            GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
            GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
            IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
        Length = 680

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 127/313 (40%), Positives = 193/313 (61%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIR-EKMDVIDLEDETIDAEILNS-MAVTDEHFKT 271
             K+A+ T G+V  D  AL + ++   C R + +      +E ++ +   +   V +E F  
Sbjct:   322 KLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNV 381

Query:   272 ALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 330
             AL   + +  +     ++P+V+W+D+GGL  VK+E+ +T+Q P+EHPE     G+  S G
Sbjct:   382 ALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLCRS-G 439

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             +L YGPPG GKTLLAKA+A  C   F+SVKGPEL+ M+ G+SE NVR +F +AR +APC+
Sbjct:   440 LLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCI 499

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             +FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DPAL
Sbjct:   500 IFFDELDSLAPNRGRSGDSGGVMDRV-VSQLLAELDGLHSSREVFVIGATNRPDLLDPAL 558

Query:   451 LRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQG-FSGADITEIC 508
             LRPGR D+L+Y+ +  D ES+LQ+  A  RK  +   V+L ++ +      +GADI  +C
Sbjct:   559 LRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLC 618

Query:   509 QRACKYAIRENIE 521
               A   A++  +E
Sbjct:   619 SDAMMCAVKRKVE 631

 Score = 159 (61.0 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 57/245 (23%), Positives = 102/245 (41%)

Query:   273 LGTSNPSALRETVVEVPNVNWEDIG--GLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 330
             +G++N SA+        +  W  +   GL +V +E+ + ++ P  H    +   +S +  
Sbjct:   111 VGSTN-SAVPSAPAYTSHEFWSSLSPAGLSDVVKEICDALR-P--HLTS-QAAALSGAGS 165

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             VL  GP G GKT+  +A+ +    +   V    L       +E  +   F +A+Q  PCV
Sbjct:   166 VLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAFAQAQQYHPCV 225

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             L   +++ +                  L QLL + D   +   V +IG T +P  + P  
Sbjct:   226 LLLKDIEVLGRDRDRLGEDARVIAT--LRQLLLDRDPAQSSHPVLVIGTTCKPQDV-PTD 282

Query:   451 LRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQR 510
             ++   L + + I    E+ R  +        P+ K+V L  LA+ T GF   D   +   
Sbjct:   283 VQTAFLHE-VKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLARRTAGFVLGDFCALLSH 341

Query:   511 ACKYA 515
             + + A
Sbjct:   342 SSRAA 346


>SGD|S000005273 [details] [associations]
            symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
            cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
            evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
            "peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
            "protein import into peroxisome matrix, receptor recycling"
            evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
            evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
            EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
            GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
            GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
            EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
            SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
            STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
            GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
            OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
            Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
        Length = 1030

 Score = 602 (217.0 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 135/327 (41%), Positives = 189/327 (57%)

Query:   261 SMAVTDEHFKTALGTS-NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 319
             S+ +T E    A   + N  ++     ++PNV W+DIGG++ VK E+ +T+  P++HPE 
Sbjct:   698 SILITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPEL 757

Query:   320 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 379
             F   GM    G+LFYGPPG GKTL+AKAIA     NF SVKGPELL M+ GESEANVR +
Sbjct:   758 FTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 816

Query:   380 FDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT-VFIIG 438
             F KAR++ PCV+FFDE+DS+A +               ++QLL E+DGMS     VF+IG
Sbjct:   817 FQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRI-VSQLLAELDGMSTDADGVFVIG 875

Query:   439 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESR-LQIFKACLRKSPVSKDVDLRALAKYTQ 497
             ATNRPD++D ALLRPGR D+L+Y+ +PD +++ L I +A  RK  +  DV L  LAK   
Sbjct:   876 ATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCP 935

Query:   498 -GFSGADITEICQRACKYA---IRENIEKDIERERRRS-ENPXXXX-----XXXXXXXXX 547
               ++GAD   +C  A   A   I   +EK + +    + EN                   
Sbjct:   936 FNYTGADFYALCSDAMLNAMSRIARMVEKKVSQHNELTGENISTRRWFDKIATKEDTKVV 995

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQA 574
             +K   F ++ +    SVS A++  Y+A
Sbjct:   996 VKMEDFLKAQEQLTPSVSRAELNHYEA 1022

 Score = 42 (19.8 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 31/146 (21%), Positives = 59/146 (40%)

Query:    37 INDDNSVVVL-HPDTMEKLQFFRGDTILIK--GKKRKDTVCIALADDTCEEPKIRMN-KV 92
             INDDNS+      +T+ +L    G  I +   G  R   + + L  +  ++  I    K+
Sbjct:   225 INDDNSIYAFTDAETLLRLDVTSGSFITVSNMGCVRLVKLFVLLLPNGFKKRTIYAPPKI 284

Query:    93 VRSNLRVRLGDVVSVHQC----ADVKYGKRVHILPVDDTIEGVT--GNLFDAYLKPYFTE 146
             + S        VV++ +      D+    +V I  V   ++      N+    LK +F+E
Sbjct:   285 IASFPDC---SVVTISKSNIGHTDIPIANQVFISRVGGWLQSQKCFQNIILTTLKKFFSE 341

Query:   147 AYRPVRKGDLFLVRGGMRSVEFKVIE 172
             + R + + DL  +       +  + E
Sbjct:   342 SKRILCQNDLIPIAFDSSMADLNIAE 367


>UNIPROTKB|G4ML45 [details] [associations]
            symbol:MGG_06686 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
            RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
            EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
            Uniprot:G4ML45
        Length = 770

 Score = 574 (207.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 118/292 (40%), Positives = 172/292 (58%)

Query:   247 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 306
             ID ++  +D      + +T  H K A+    P+A RE    VPN  W ++G L+NV+++L
Sbjct:   459 IDNQEMQLDQND-EDICITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKL 517

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +  +  P+E PEKF   G+ PS G+L +GPPGCGKTL+AKA+AN  +ANFIS+KGPELL 
Sbjct:   518 EYAIVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLN 577

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GESE NVR++F +A+ SAPC+LFFDELD++                  +N LLTE+D
Sbjct:   578 KYVGESEYNVRQLFSRAKSSAPCILFFDELDALVP---TRDFTMSGATSRVVNALLTELD 634

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR------K 480
             G+  ++ +++IGATNRPD ID A+ RPGRL   IY+ LP  E R  I +          +
Sbjct:   635 GVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGR 694

Query:   481 SP--VSKDVDLRALAKYTQGFSGADITEI---CQRACKYAIRENIEKDIERE 527
             +P  V K ++  A       F+GAD+ ++      AC   ++++    I  E
Sbjct:   695 APDAVRKTIERVARDPRCGKFTGADLRQLLTAASEACMIRVQDDEAPMISEE 746

 Score = 346 (126.9 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 76/224 (33%), Positives = 122/224 (54%)

Query:   294 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 353
             ED+GG+  +   L++ +  P+   E++ + G  P   +L +GP G GKT + +A+A+  Q
Sbjct:   197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256

Query:   354 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXX 413
               F+ V    L++   GESE N+RE FD+A + APC+LF DE+D +A +           
Sbjct:   257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVR 316

Query:   414 XXXXLNQLLTEMDGMSAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ 472
                 ++Q L ++   ++  + V +I ATNRPD I+P + R  R  +L  + +PDE +R  
Sbjct:   317 MSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQEL-EMSMPDEAARES 373

Query:   473 IFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
             I +   R   +S DVD  ALA+ T G+ GAD+      A   A+
Sbjct:   374 ILRTMTRNKRLSDDVDFTALARLTPGYVGADLATAVDFAASEAM 417

 Score = 54 (24.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query:   208 DDVGGVRKIAKDTHGYVGADLAALCTEAALQCI 240
             DDV     +A+ T GYVGADLA     AA + +
Sbjct:   386 DDVD-FTALARLTPGYVGADLATAVDFAASEAM 417


>RGD|621637 [details] [associations]
            symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
            "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
            evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
            process" evidence=ISO] [GO:0006625 "protein targeting to
            peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
            evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
            evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
            matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0032403 "protein complex binding"
            evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
            evidence=IEA;ISO] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
            GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
            HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
            IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
            ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
            KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
            Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
        Length = 978

 Score = 598 (215.6 bits), Expect = 1.6e-57, P = 1.6e-57
 Identities = 138/356 (38%), Positives = 207/356 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMDVIDLEDETIDAEILNS-MAVTDEHFKTA 272
             ++A+   G+V  DL AL T A+   C R K   + + +E  + E+  +   +  E F  A
Sbjct:   622 QLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQA 680

Query:   273 LG---TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
             L    T++  A+     ++P+V+W D+GGL++VK+E+ ET+Q P+EHPE     G+  S 
Sbjct:   681 LDQLQTAHSQAVGAP--KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS- 736

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 389
             G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC
Sbjct:   737 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 796

Query:   390 VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPA 449
             ++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DPA
Sbjct:   797 IIFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 855

Query:   450 LLRPGRLDQLIYIPLP-DEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITEI 507
             LLRPGR D+L+++    D  S+L++  A  RK  +   V L   L       +GAD+  +
Sbjct:   856 LLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSL 915

Query:   508 CQRACKYAIRENIEKDIER--ERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYAR 561
             C  A   A++  + +D+E   E R S                  +V  +E ++Y R
Sbjct:   916 CSDAMMTALKRRV-RDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKR 970

 Score = 144 (55.7 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 56/225 (24%), Positives = 90/225 (40%)

Query:   293 WEDIG--GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             W+ +   GLE +  EL   ++ P   P      G S    VL  GPPG GKT    A  +
Sbjct:   430 WDSLSPPGLEALVNELCAVLK-PHLQPGGTLLTGTSC---VLLQGPPGSGKTTAVTAACS 485

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 + + V    L        E  ++  F +AR+  P VL    LD +           
Sbjct:   486 RLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLGEDA 545

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L  LL + D +S    + ++  T+R   + P  +R     +L  +P+  E  R
Sbjct:   546 RVVAT--LRHLLLDEDPLSRCPPLMVVATTSRVQDL-PTDVRTAFPHEL-EVPVLSESQR 601

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             L + +A     P+ ++V+L  LA+   GF   D+  +   A + A
Sbjct:   602 LSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAA 646


>UNIPROTKB|P54777 [details] [associations]
            symbol:Pex6 "Peroxisome assembly factor 2" species:10116
            "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
            binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
            matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
            binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
            evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
            GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
            HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
            OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
            RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
            STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
            UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
            Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
        Length = 978

 Score = 598 (215.6 bits), Expect = 1.6e-57, P = 1.6e-57
 Identities = 138/356 (38%), Positives = 207/356 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMDVIDLEDETIDAEILNS-MAVTDEHFKTA 272
             ++A+   G+V  DL AL T A+   C R K   + + +E  + E+  +   +  E F  A
Sbjct:   622 QLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQA 680

Query:   273 LG---TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
             L    T++  A+     ++P+V+W D+GGL++VK+E+ ET+Q P+EHPE     G+  S 
Sbjct:   681 LDQLQTAHSQAVGAP--KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS- 736

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 389
             G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC
Sbjct:   737 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 796

Query:   390 VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPA 449
             ++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DPA
Sbjct:   797 IIFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 855

Query:   450 LLRPGRLDQLIYIPLP-DEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITEI 507
             LLRPGR D+L+++    D  S+L++  A  RK  +   V L   L       +GAD+  +
Sbjct:   856 LLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSL 915

Query:   508 CQRACKYAIRENIEKDIER--ERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYAR 561
             C  A   A++  + +D+E   E R S                  +V  +E ++Y R
Sbjct:   916 CSDAMMTALKRRV-RDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKR 970

 Score = 144 (55.7 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 56/225 (24%), Positives = 90/225 (40%)

Query:   293 WEDIG--GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             W+ +   GLE +  EL   ++ P   P      G S    VL  GPPG GKT    A  +
Sbjct:   430 WDSLSPPGLEALVNELCAVLK-PHLQPGGTLLTGTSC---VLLQGPPGSGKTTAVTAACS 485

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 + + V    L        E  ++  F +AR+  P VL    LD +           
Sbjct:   486 RLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLGEDA 545

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L  LL + D +S    + ++  T+R   + P  +R     +L  +P+  E  R
Sbjct:   546 RVVAT--LRHLLLDEDPLSRCPPLMVVATTSRVQDL-PTDVRTAFPHEL-EVPVLSESQR 601

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             L + +A     P+ ++V+L  LA+   GF   D+  +   A + A
Sbjct:   602 LSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAA 646


>CGD|CAL0005974 [details] [associations]
            symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
            "fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
            targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
            activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA;ISO] [GO:0016562 "protein import into
            peroxisome matrix, receptor recycling" evidence=IEA;ISO]
            [GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
            "replicative cell aging" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
            EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
            RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
            STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
            KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
        Length = 1157

 Score = 569 (205.4 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 113/225 (50%), Positives = 154/225 (68%)

Query:   288 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 347
             +PNV WEDIGGL+ VK E+ +T+  P++HPE F   G+    G+LFYGPPG GKTLLAKA
Sbjct:   809 IPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKA 867

Query:   348 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXX 407
             IA     NF SVKGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +     
Sbjct:   868 IATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQG 927

Query:   408 XXXXXXXXXXLNQLLTEMDGMSAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                       ++QLL E+DGMS++    VF++GATNRPD++D ALLRPGR D+++Y+ + 
Sbjct:   928 DSGGVMDRI-VSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 986

Query:   466 D-EESRLQIFKACLRKSPVSKDVDLRALA-KYTQGFSGADITEIC 508
             D +E + +I +A  RK  +  +V+L  +A K +  F+GAD   +C
Sbjct:   987 DTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALC 1031

 Score = 42 (19.8 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query:    39 DDNSVVV-LHPDTMEKLQF--FRGDTILIKGKKRKDTVCIALADDTCEEPK 86
             DD+ + V ++     KL F  F GD + IK     +T  + +   T  EP+
Sbjct:   282 DDSELFVFINNADFIKLGFPIFNGDLVKIKTGTETETETVVVRVFTFTEPQ 332

 Score = 37 (18.1 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query:   201 RLDEVGYDDVGGVRKIAKD 219
             R+  V ++D+GG+  + KD
Sbjct:   808 RIPNVKWEDIGGL-DLVKD 825


>UNIPROTKB|Q59ZE6 [details] [associations]
            symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
            species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO] [GO:0016562 "protein import into
            peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
            "ATPase activity" evidence=ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
            EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
            RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
            STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
            KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
        Length = 1157

 Score = 569 (205.4 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 113/225 (50%), Positives = 154/225 (68%)

Query:   288 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 347
             +PNV WEDIGGL+ VK E+ +T+  P++HPE F   G+    G+LFYGPPG GKTLLAKA
Sbjct:   809 IPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKA 867

Query:   348 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXX 407
             IA     NF SVKGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +     
Sbjct:   868 IATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQG 927

Query:   408 XXXXXXXXXXLNQLLTEMDGMSAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                       ++QLL E+DGMS++    VF++GATNRPD++D ALLRPGR D+++Y+ + 
Sbjct:   928 DSGGVMDRI-VSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 986

Query:   466 D-EESRLQIFKACLRKSPVSKDVDLRALA-KYTQGFSGADITEIC 508
             D +E + +I +A  RK  +  +V+L  +A K +  F+GAD   +C
Sbjct:   987 DTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALC 1031

 Score = 42 (19.8 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query:    39 DDNSVVV-LHPDTMEKLQF--FRGDTILIKGKKRKDTVCIALADDTCEEPK 86
             DD+ + V ++     KL F  F GD + IK     +T  + +   T  EP+
Sbjct:   282 DDSELFVFINNADFIKLGFPIFNGDLVKIKTGTETETETVVVRVFTFTEPQ 332

 Score = 37 (18.1 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query:   201 RLDEVGYDDVGGVRKIAKD 219
             R+  V ++D+GG+  + KD
Sbjct:   808 RIPNVKWEDIGGL-DLVKD 825


>UNIPROTKB|E9PE75 [details] [associations]
            symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
            "Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0006625 "protein targeting to peroxisome" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0043231 "intracellular membrane-bounded
            organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
            HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
            ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
            UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
        Length = 961

 Score = 571 (206.1 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
 Identities = 126/316 (39%), Positives = 188/316 (59%)

Query:   199 ENRLD-EVG-YDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 256
             +N+LD ++  + D+  ++ +AK+T G+V  D   L   A    I  +     L  ++I  
Sbjct:   432 KNKLDCDINKFTDLD-LQHVAKETGGFVARDFTVLVDRA----IHSR-----LSRQSIST 481

Query:   257 EILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLENVKRELQETVQYPVE 315
                  + +T   F+ AL    P++LR   +  P ++ W+ IGGL  V++ L +T+Q P +
Sbjct:   482 R--EKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAK 539

Query:   316 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 375
             +PE F    +    G+L YGPPG GKTLLA  IA E + NFISVKGPELL+ + G SE  
Sbjct:   540 YPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQA 599

Query:   376 VREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVF 435
             VR+IF +A+ + PC+LFFDE +SIA +               +NQLLT++DG+   + V+
Sbjct:   600 VRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQLLTQLDGVEGLQGVY 656

Query:   436 IIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKY 495
             ++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I        P++ DVDL+ +A  
Sbjct:   657 VLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASV 716

Query:   496 TQGFSGADITEICQRA 511
             T  F+GAD+  +   A
Sbjct:   717 TDSFTGADLKALLYNA 732

 Score = 48 (22.0 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
 Identities = 29/127 (22%), Positives = 48/127 (37%)

Query:   477 CLRKSPVSKDVDLRALAKYTQGFSGADITEIC-QRACKYAI---RENIEKDIE----RER 528
             CL  +P S   DL  +    Q FS   +     Q  C+      R+ +  DI     R R
Sbjct:   828 CL-SAPSSMTQDLPGVPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGRYR 886

Query:   529 RRS-ENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSR 583
              +S E+              I   H   ++ + R S+S+ D +     Y++F    ++  
Sbjct:   887 SQSGEDESMNQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKN 946

Query:   584 GFGSEFR 590
               G+ FR
Sbjct:   947 QSGTMFR 953


>UNIPROTKB|E2RDF7 [details] [associations]
            symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
            "protein complex binding" evidence=IEA] [GO:0016561 "protein import
            into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
            GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
            GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
            Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
            NextBio:20856540 Uniprot:E2RDF7
        Length = 980

 Score = 594 (214.2 bits), Expect = 4.4e-57, P = 4.4e-57
 Identities = 131/320 (40%), Positives = 198/320 (61%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMDVI--DLEDETIDAEILNS-MAVTDEHFK 270
             ++A+   G+V  DL AL T ++ + C R K   +   L +E  + E+  +   +  E F 
Sbjct:   622 QLARRCAGFVVGDLYALLTHSSRVACTRIKNSGLAGGLSEED-EGELCAAGFPLLAEDFG 680

Query:   271 TALG---TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              AL    T++  A+     ++P+V+W D+GGL+ VK+E+ ET+Q P+EHPE     G+  
Sbjct:   681 QALEQLQTAHSQAIGAP--KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR 737

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +A
Sbjct:   738 S-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA 796

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PC++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++D
Sbjct:   797 PCIIFFDELDSLAPSRGRNGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLD 855

Query:   448 PALLRPGRLDQLIYIPLP-DEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADIT 505
             PALLRPGR D+L+++ +  D  S+L++  A  RK  +   V L   L +     +GAD+ 
Sbjct:   856 PALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLY 915

Query:   506 EICQRACKYAIRENIEKDIE 525
              +C  A   A++  + +D+E
Sbjct:   916 SLCSDAMTTALKRRV-RDLE 934

 Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 53/225 (23%), Positives = 92/225 (40%)

Query:   293 WEDIG--GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             W  +   GLE +  EL   ++ P   P      G S    VL  GPPG GKT    A  +
Sbjct:   430 WNSLSPPGLETLVTELCAALK-PRLQPGGALLTGTS---SVLLRGPPGSGKTTAVTAACS 485

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 + + V    L     G  E  ++  F +AR+  P VL    +D +           
Sbjct:   486 RLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRPVVLLLTAVDLLGRNRDGLGEDA 545

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L  LL + D +++   + ++  T++   + PA ++     +L  +P+  E  R
Sbjct:   546 RVVAT--LCHLLQDEDPLTSCPPLMVVATTSQAQDL-PADVQTAFPHEL-EVPVLSEGQR 601

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             L + +A     P+ ++V+L  LA+   GF   D+  +   + + A
Sbjct:   602 LSVLQALTAHLPLGQEVNLTQLARRCAGFVVGDLYALLTHSSRVA 646


>UNIPROTKB|F1NG80 [details] [associations]
            symbol:SPATA5L1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
            EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
            Uniprot:F1NG80
        Length = 748

 Score = 432 (157.1 bits), Expect = 6.0e-40, P = 6.0e-40
 Identities = 97/276 (35%), Positives = 144/276 (52%)

Query:   244 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVK 303
             ++++ ++  T +A ++     T    K  +       L E   ++P      + GL++V 
Sbjct:   155 VEILSVDPVTEEAGLITPQ--TSVTIKEVITLERYRLLTEDTAKIP------VAGLDDVG 206

Query:   304 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 363
               L+E V  P   P  F+K G+S   GVL  GPPG GKTLL KA+A E  A  + + GP 
Sbjct:   207 ESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPA 266

Query:   364 LLTMWFGESEANVREIFDKARQSA---PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             L     GESE N+R +F+K R+ +   P VLF DE+D++  +                 Q
Sbjct:   267 LYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPEDRLVA---Q 323

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             LLT +DG+  K  + ++ ATNRPD +DPAL RPGR D+ + I  P    R  I +     
Sbjct:   324 LLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLTCS 383

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
              P+S D+DL  LA+ T G+ GAD+T +C+ A   A+
Sbjct:   384 MPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAV 419

 Score = 396 (144.5 bits), Expect = 5.5e-57, Sum P(3) = 5.5e-57
 Identities = 88/219 (40%), Positives = 129/219 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             K+A+ T GYVGADL ALC EAA+Q +      +D       AE+L +MA   E FK    
Sbjct:   394 KLAEMTTGYVGADLTALCREAAMQAVFHSS--LD------SAEVLINMADFQEAFKKIQP 445

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
             +S  SA+   + E   + WE IGGLE+VK +L+++V++P++ P+ F + G++  KGVL Y
Sbjct:   446 SSFRSAIG--LKECKPITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLY 503

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GP GC KT L KA+A  C  +F+SV G EL + + G+SE  + ++F +AR + P ++F D
Sbjct:   504 GPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLD 563

Query:   395 ELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT 433
             E+DSI                  L+ LL E+DG+  K T
Sbjct:   564 EIDSILGSRSHSKSGHGVSERV-LSVLLNELDGVGLKVT 601

 Score = 241 (89.9 bits), Expect = 5.5e-57, Sum P(3) = 5.5e-57
 Identities = 49/102 (48%), Positives = 66/102 (64%)

Query:   419 NQLLTEMDGMSAKKTVF-IIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKAC 477
             N+L  E++        F ++ ATNRPD++D ALLRPGRLD++IYIP PD + RL I K C
Sbjct:   606 NKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKIC 665

Query:   478 LRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
               K P+  DV L+ +A  T  FSGADI  +C+ A   A++EN
Sbjct:   666 TEKIPLDTDVSLQDIAARTDLFSGADIENLCKEAALLALQEN 707

 Score = 45 (20.9 bits), Expect = 5.5e-57, Sum P(3) = 5.5e-57
 Identities = 22/89 (24%), Positives = 35/89 (39%)

Query:   129 EGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIF 188
             E V   L + Y+ P++     P        VR  +  VE   ++    E  ++ P T + 
Sbjct:   125 EAVRDLLTNVYVSPHYVVTVGPN-------VRAPVLHVEILSVDPVTEEAGLITPQTSVT 177

Query:   189 CEG----EPVR--REDENRLDEVGYDDVG 211
              +     E  R   ED  ++   G DDVG
Sbjct:   178 IKEVITLERYRLLTEDTAKIPVAGLDDVG 206


>UNIPROTKB|E1BY08 [details] [associations]
            symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
            import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
            complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
            coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
            localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
            GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
            CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
            GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
            IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
            ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
            KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
        Length = 1290

 Score = 582 (209.9 bits), Expect = 9.2e-57, Sum P(2) = 9.2e-57
 Identities = 133/350 (38%), Positives = 197/350 (56%)

Query:   179 CVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQ 238
             C+ +PD +  CE      +++   D   + D+  ++ +AK+T G+V  D   L   A   
Sbjct:   744 CIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLD-LQYVAKETEGFVARDFTMLVDRAIHA 802

Query:   239 CIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIG 297
             CI  +               LN ++  D  F+ AL    P ALR   +  P ++ W+ IG
Sbjct:   803 CISNQ--------NAFQHGELN-LSTVD--FQKALKDFTPLALRNVSLHKPKDIGWDRIG 851

Query:   298 GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI 357
             GL++V++ L +T+  P ++PE F    +    GVL YG PG GKTLLA  +A E   NFI
Sbjct:   852 GLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVARESGMNFI 911

Query:   358 SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXX 417
             SVKGPELL+ + G SE  VR+IF +A+ + PC++FFDE DSIA +               
Sbjct:   912 SVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGHDNTGVTDRV--- 968

Query:   418 LNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKAC 477
             +NQLLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SR +I KA 
Sbjct:   969 VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSRCEILKAL 1028

Query:   478 LRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
                  ++ DVDL  LA  T+ F+GAD+  +   A   AI  N+   + ++
Sbjct:  1029 SHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIH-NLSSGLTQD 1077

 Score = 132 (51.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
 Identities = 62/253 (24%), Positives = 104/253 (41%)

Query:   281 LRETVVEVPNVNWEDIGGLENVKRELQETVQYPV-EHPEKFEKFGMSP---SKGVLFYGP 336
             +R+T   +P      +GG++ +     E + + +   P   +  G++    S GVL  G 
Sbjct:   549 MRDTDRNLPYKRLNHLGGVDKLGTSSFEHISHSLLGRPLSQKLAGIAVGLRSGGVLLTGG 608

Query:   337 PGCGKTLLAKAIANEC----QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLF 392
              G GK+ LAKAI  E      A+   +    L     G    NV E F +A    P ++ 
Sbjct:   609 KGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWRQPSIIL 668

Query:   393 FDELDSIA------TQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
              D+LD I                        L  L+ E+  +S    + +I  +     +
Sbjct:   669 LDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEV--ISLGSLIALIATSQSEHAL 726

Query:   447 DPALLRP-G-RLDQLIY-IPLPDEESRLQIFKACLRKS---PVSK--DVDLRALAKYTQG 498
              P+L+   G  + Q    I  PD++ R ++  + ++      V K  D+DL+ +AK T+G
Sbjct:   727 HPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLDLQYVAKETEG 786

Query:   499 FSGADITEICQRA 511
             F   D T +  RA
Sbjct:   787 FVARDFTMLVDRA 799

 Score = 42 (19.8 bits), Expect = 9.2e-57, Sum P(2) = 9.2e-57
 Identities = 31/120 (25%), Positives = 53/120 (44%)

Query:    89 MNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD-DTIEGVTGNLFDAYLKPYFTEA 147
             MN+ +   L +  G+ V +  C+ V   ++V + P+  D  E +   L  + L+ +  + 
Sbjct:    76 MNRHLAEKLGIADGEQVFLEPCSHVSSCQQVEVEPLSADDWEIL--ELHASSLEKHLLDQ 133

Query:   148 YRPVRKGDLFLVRGGMRSVEFKVIETDPPE--YCVVAPDTEIF-CEGEPVRRE-DENRLD 203
              R V    +F V     +  +  I T  P   Y  + P TE+  C   P  RE +EN +D
Sbjct:   134 IRIVFPKAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPRTELLIC---PKARELEENIID 190


>UNIPROTKB|Q60HE0 [details] [associations]
            symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
            fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0006625 "protein targeting to
            peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
            evidence=ISS] [GO:0008022 "protein C-terminus binding"
            evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
            translocation" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
            [GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
            "protein stabilization" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
            GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
            GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
            ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
        Length = 570

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 128/317 (40%), Positives = 190/317 (59%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREK-MDVIDLEDETIDAEILNS-MAVTDEHFKT 271
             ++A+   G+V  DL AL T ++   C R K + +     E  + E+  +   +  E F  
Sbjct:   212 QLARRCAGFVVGDLYALLTHSSRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLAEDFGQ 271

Query:   272 ALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 330
             AL     +  +     ++P+V+W D+GGL+ VK+E+ ET+Q P+EHPE     G+  S G
Sbjct:   272 ALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-G 329

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             +L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC+
Sbjct:   330 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 389

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             +FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DPAL
Sbjct:   390 IFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 448

Query:   451 LRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITEIC 508
             LRPGR D+L+++    D  S+L++  A  RK  +   V L   L       +GAD+  +C
Sbjct:   449 LRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLC 508

Query:   509 QRACKYAIRENIEKDIE 525
               A   A++  +  D+E
Sbjct:   509 SDAMTAALKRRVH-DLE 524

 Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 47/191 (24%), Positives = 84/191 (43%)

Query:   325 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 384
             ++ +  VL  GPPGCGKT +  A  ++   + + V    L     G  E  ++ IF +AR
Sbjct:    50 LTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRAR 109

Query:   385 QSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPD 444
             +  P VL    +D +                  L  LL + D +++   + ++  T+R  
Sbjct:   110 RCRPAVLLLTAVDLLGRDRDGLGEDARVVAA--LRHLLLDEDPLNSCPPLMVVATTSRAQ 167

Query:   445 IIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI 504
              + PA ++     +L  +P   E  RL I +A     P+ ++V+L  LA+   GF   D+
Sbjct:   168 DL-PADVQTAFPHEL-EVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDL 225

Query:   505 TEICQRACKYA 515
               +   + + A
Sbjct:   226 YALLTHSSRAA 236


>UNIPROTKB|G4NBI6 [details] [associations]
            symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
            RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
            EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
            Uniprot:G4NBI6
        Length = 1375

 Score = 585 (211.0 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
 Identities = 157/407 (38%), Positives = 217/407 (53%)

Query:   209 DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEH 268
             D+GGV   A  T   V  DL  +  + A+   R +++   L ++   +   N  AVT   
Sbjct:   900 DLGGV---ALKTAALVAGDLVDVI-DRAIVAQRSRLE--SLAEKASQSRQGNQPAVTLRD 953

Query:   269 FKTALGTSNPSALR---ETVVE--------------VPNVNWEDIGGLENVKRELQETVQ 311
              + A GT+     +   +T VE              +P+V W+D+GGL NVK  + ET+Q
Sbjct:   954 VQVAGGTAVRGLTKGDLDTAVEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAVMETIQ 1013

Query:   312 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 371
              P+E PE F K GM    G+LFYGPPG GKTLLAKAIA E   NF SVKGPELL M+ GE
Sbjct:  1014 LPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGE 1072

Query:   372 SEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             SEANVR +F +AR + PCV+FFDELDS+A +               ++QLL E+DGMS+ 
Sbjct:  1073 SEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRI-VSQLLAELDGMSSG 1131

Query:   432 KT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD-EESRLQIFKACLRKSPVSKD 486
                   VF+IGATNRPD++D ALLRPGR D+L+Y+ + D  E +L I +A  RK  +   
Sbjct:  1132 DDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTLHPS 1191

Query:   487 VDLRALA-KYTQGFSGADITEICQRACKYAI-RE--NIEKDIER--ERRRSENPXXXXXX 540
             V LRA+A K    ++GAD   +C  A   A+ R+  +++  I+     R+ E        
Sbjct:  1192 VSLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQASHVDAKIKAMSAERQQEITTAYFFD 1251

Query:   541 XXXXXXXIKAVHFEESMKYARR----SVSDADIRKYQAFAQTLQQSR 583
                    I  +  EE +  A      SVS  ++  Y+    T +  R
Sbjct:  1252 HFATPEDIDVMVTEEDLLAAHEEMIPSVSAGELAHYERVRATFEGGR 1298

 Score = 38 (18.4 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query:   138 AYLKPYFTEAYRPVRKGDLFLV 159
             A LK +F +  R ++ GDL  V
Sbjct:   573 AGLKWHFEKKLRVIKAGDLIAV 594


>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
            symbol:PF14_0126 "hypothetical protein,
            conserved" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
            RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
            MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
            KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
        Length = 1219

 Score = 526 (190.2 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 101/213 (47%), Positives = 140/213 (65%)

Query:   267 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 326
             +H   AL    PS ++E  +++P   ++DIGG + VKR + E + YP ++   ++K+ + 
Sbjct:   808 KHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIE 867

Query:   327 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 386
               KG+L YGPPGC KTL AKAIA+E   NFISVKGPE+ + + GESE ++R IF KAR++
Sbjct:   868 SPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKAREN 927

Query:   387 APCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
              PCV+FFDE+DSIA                 L QLL E+DG+  +  V I+ ATNRPD+I
Sbjct:   928 HPCVIFFDEIDSIAVNRNNNQNFVSNRV---LCQLLNEIDGIKNRLNVIILAATNRPDLI 984

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLR 479
             DPAL+RPGR D++IY+PLP+  SR  I K  L+
Sbjct:   985 DPALMRPGRFDRIIYVPLPNYSSRFAILKKNLK 1017

 Score = 131 (51.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 39/108 (36%), Positives = 56/108 (51%)

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF--KACL 478
             LL  MDG+       +IGATN  + ID AL R GR D+ I + LP+ + R+ IF  K  L
Sbjct:   584 LLNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNL 643

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN--IEKDI 524
              K  + K   +  LA   Q F+ +DI  +   +    ++EN  I +DI
Sbjct:   644 IKHNIGKK-KIHKLADLCQSFTCSDINSLINISMFLNLKENKIISRDI 690

 Score = 108 (43.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 30/109 (27%), Positives = 55/109 (50%)

Query:   248 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSAL--RETVV---EVPNVNWEDIGGLENV 302
             D+++   D  I+N     D+  KT + + +   L  ++ VV   E   +N   +GG   +
Sbjct:   379 DIKNVVDDKHIINKY---DKE-KTNINSDHMKKLNLKKMVVNKKEKKGLN--KLGGYNKI 432

Query:   303 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 351
             K ++   +  P+ +   ++ + +   KG+L +GPPGCGKT +A  I  E
Sbjct:   433 KEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481

 Score = 71 (30.1 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query:   492 LAKYTQGFSGADITEICQRACKYAIRENIEK 522
             LAK T+ +SGA+I  IC+ A   A+R+ ++K
Sbjct:  1113 LAKKTKKYSGAEIVNICREASICALRQTLKK 1143

 Score = 47 (21.6 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query:   200 NRLDEVGYDDVGGVRKIAKDTHGYV 224
             N+ ++ G + +GG  KI +D + Y+
Sbjct:   416 NKKEKKGLNKLGGYNKIKEDIYYYI 440


>UNIPROTKB|Q8ILW7 [details] [associations]
            symbol:PF14_0126 "AAA family ATPase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
            RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
            MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
            KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
        Length = 1219

 Score = 526 (190.2 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 101/213 (47%), Positives = 140/213 (65%)

Query:   267 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 326
             +H   AL    PS ++E  +++P   ++DIGG + VKR + E + YP ++   ++K+ + 
Sbjct:   808 KHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIE 867

Query:   327 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 386
               KG+L YGPPGC KTL AKAIA+E   NFISVKGPE+ + + GESE ++R IF KAR++
Sbjct:   868 SPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKAREN 927

Query:   387 APCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
              PCV+FFDE+DSIA                 L QLL E+DG+  +  V I+ ATNRPD+I
Sbjct:   928 HPCVIFFDEIDSIAVNRNNNQNFVSNRV---LCQLLNEIDGIKNRLNVIILAATNRPDLI 984

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLR 479
             DPAL+RPGR D++IY+PLP+  SR  I K  L+
Sbjct:   985 DPALMRPGRFDRIIYVPLPNYSSRFAILKKNLK 1017

 Score = 131 (51.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 39/108 (36%), Positives = 56/108 (51%)

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF--KACL 478
             LL  MDG+       +IGATN  + ID AL R GR D+ I + LP+ + R+ IF  K  L
Sbjct:   584 LLNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNL 643

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN--IEKDI 524
              K  + K   +  LA   Q F+ +DI  +   +    ++EN  I +DI
Sbjct:   644 IKHNIGKK-KIHKLADLCQSFTCSDINSLINISMFLNLKENKIISRDI 690

 Score = 108 (43.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 30/109 (27%), Positives = 55/109 (50%)

Query:   248 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSAL--RETVV---EVPNVNWEDIGGLENV 302
             D+++   D  I+N     D+  KT + + +   L  ++ VV   E   +N   +GG   +
Sbjct:   379 DIKNVVDDKHIINKY---DKE-KTNINSDHMKKLNLKKMVVNKKEKKGLN--KLGGYNKI 432

Query:   303 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 351
             K ++   +  P+ +   ++ + +   KG+L +GPPGCGKT +A  I  E
Sbjct:   433 KEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481

 Score = 71 (30.1 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query:   492 LAKYTQGFSGADITEICQRACKYAIRENIEK 522
             LAK T+ +SGA+I  IC+ A   A+R+ ++K
Sbjct:  1113 LAKKTKKYSGAEIVNICREASICALRQTLKK 1143

 Score = 47 (21.6 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query:   200 NRLDEVGYDDVGGVRKIAKDTHGYV 224
             N+ ++ G + +GG  KI +D + Y+
Sbjct:   416 NKKEKKGLNKLGGYNKIKEDIYYYI 440


>UNIPROTKB|E1BPU3 [details] [associations]
            symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060152 "microtubule-based peroxisome localization"
            evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
            "protein import into peroxisome matrix" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
            GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
            InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
            EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
            IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
        Length = 1281

 Score = 565 (203.9 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
 Identities = 121/293 (41%), Positives = 176/293 (60%)

Query:   213 VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTA 272
             +++IAK+T G+V  D   L  + A+       +V   E+          + +T   F+ A
Sbjct:   768 LQRIAKETEGFVARDFTML-VDRAIHSHLSHQNVYTREE----------LVLTTLDFQKA 816

Query:   273 LGTSNPSALRETVVEVP-NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             L    P +LR   +  P ++ W+ IGGL +V++ L +T+Q P ++PE F    +    GV
Sbjct:   817 LRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGV 876

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L YGPPG GKTLLA  IA E   NFISVKGPELL+ + G SE  VR++F +A+ + PC+L
Sbjct:   877 LLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCIL 936

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             FFDE +SIA +               +NQLLT++DG+   + V+++ AT+RPD+IDPALL
Sbjct:   937 FFDEFESIAPRRGHDNTGVTDRV---VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 993

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI 504
             RPGRLD+ +Y P PD+ SRL+I        P++ DVDL+ +A  T  F+GAD+
Sbjct:   994 RPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFTGADL 1046

 Score = 40 (19.1 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query:   548 IKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSRGFGSEFR 590
             I   H   ++ + R S+S+ D +     Y++F    ++    G+ FR
Sbjct:  1227 ISQSHLMTALSHTRPSISEDDWKTFAELYESFQNPKKRKNQSGTVFR 1273

 Score = 39 (18.8 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query:   168 FKVIETDPPEYCVVAPDTEIF 188
             F+V ++ PP  C  A  T +F
Sbjct:   286 FRVCKSQPPSMCK-ASATSVF 305


>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
            symbol:MAL8P1.92 "ATPase, putative"
            species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
            ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
            GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
            Uniprot:Q8IAX9
        Length = 1200

 Score = 581 (209.6 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
 Identities = 114/252 (45%), Positives = 163/252 (64%)

Query:   283 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 342
             E + EVPN+N ++IG L+ +K+ L+     PV++   ++  G++ S G+L YGPPGCGKT
Sbjct:   665 ENICEVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKT 724

Query:   343 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 402
             +LAKAI+NE +ANFI++KGPE+L  + GESE  VREIF  A    PC++FFDE+DSI   
Sbjct:   725 MLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICIN 784

Query:   403 XXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 462
                            +NQLL+EMDG+S ++ V+II  TNRPDIID ALLR GR DQLIYI
Sbjct:   785 RSNNKSVSASDRV--VNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYI 842

Query:   463 PLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
              LP  + R+ I K   +  P+ K+V    ++K T+G+SGAD+  + + +   A++E  +K
Sbjct:   843 SLPKYQGRVDILKKLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRDK 902

Query:   523 -DIERERRRSEN 533
              DI+ +     N
Sbjct:   903 IDIQNKSNPKNN 914

 Score = 164 (62.8 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 67/298 (22%), Positives = 135/298 (45%)

Query:   241 REKMDVID--LEDE-TIDAEILNSMA------VTDEHFKTALGTSNPSALRETVVEVPNV 291
             ++K+ +I+  L+DE  + + + N+        +  EH K++   SN   +  +++    +
Sbjct:   198 KKKLKIIEGKLKDEKNVQSHLTNNQINENMNHMKQEHNKSSFNNSNK--IINSIISNKTL 255

Query:   292 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL-FYGPPGCGKTLLAKAIAN 350
             N  D  G++N+K+++  ++ YP        KF +S    ++  +G  G GKT L+ AIA 
Sbjct:   256 N--DFKGIKNIKKDILYSIIYPY-------KFRLSNLNCIINIFGTSGTGKTTLSYAIAG 306

Query:   351 ECQANFISVKGPELLTMWFGESEAN-VREIFDKARQSAP-CVLFFDELDSIATQXXXXXX 408
             EC   F  +K PE +     +++ N +R +F+  +      +L  D++D I +       
Sbjct:   307 ECGCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEYDKAILCIDDIDIIFSSKDDSTD 366

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 468
                         LL      +    + ++ + N+P+  D  L    ++ + I IP+P  +
Sbjct:   367 LYL------FTYLLNIFHNSNI---IVLLLSINKPN--DSILY--SKIQKFITIPIPTYD 413

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACK-YAIRENIEKDIE 525
              R++I +    +  +S D+   A   Y  GF+   I +I   +   Y   E + KD++
Sbjct:   414 DRIEILEQASCEYFLSFDIPYTASITY--GFNRGQIFDIMNESLNLYIYNELLRKDLK 469

 Score = 38 (18.4 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
 Identities = 15/59 (25%), Positives = 30/59 (50%)

Query:   167 EFKVIETDPPEYC--VVAPDTEIFCEG-EPVRRE--DEN--RLDEVGYDDVGGVRKIAK 218
             E KVIE    +     +  + +I  EG   ++++  +EN   +  +  D++G ++KI K
Sbjct:   628 EEKVIEGKAEKKIQKTIEINNDIIFEGVNNIKKKMTNENICEVPNINLDNIGSLKKIKK 686


>UNIPROTKB|O43933 [details] [associations]
            symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
            "Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
            evidence=IMP] [GO:0008022 "protein C-terminus binding"
            evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
            evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
            [GO:0060152 "microtubule-based peroxisome localization"
            evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
            "peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
            "intracellular membrane-bounded organelle" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
            PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
            EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
            Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
            GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
            EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
            EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
            RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
            SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
            PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
            Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
            CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
            MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
            PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
            PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
            Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
            GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
            Uniprot:O43933
        Length = 1283

 Score = 571 (206.1 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
 Identities = 126/316 (39%), Positives = 188/316 (59%)

Query:   199 ENRLD-EVG-YDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 256
             +N+LD ++  + D+  ++ +AK+T G+V  D   L   A    I  +     L  ++I  
Sbjct:   754 KNKLDCDINKFTDLD-LQHVAKETGGFVARDFTVLVDRA----IHSR-----LSRQSIST 803

Query:   257 EILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLENVKRELQETVQYPVE 315
                  + +T   F+ AL    P++LR   +  P ++ W+ IGGL  V++ L +T+Q P +
Sbjct:   804 R--EKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAK 861

Query:   316 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 375
             +PE F    +    G+L YGPPG GKTLLA  IA E + NFISVKGPELL+ + G SE  
Sbjct:   862 YPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQA 921

Query:   376 VREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVF 435
             VR+IF +A+ + PC+LFFDE +SIA +               +NQLLT++DG+   + V+
Sbjct:   922 VRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQLLTQLDGVEGLQGVY 978

Query:   436 IIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKY 495
             ++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I        P++ DVDL+ +A  
Sbjct:   979 VLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASV 1038

Query:   496 TQGFSGADITEICQRA 511
             T  F+GAD+  +   A
Sbjct:  1039 TDSFTGADLKALLYNA 1054

 Score = 48 (22.0 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
 Identities = 29/127 (22%), Positives = 48/127 (37%)

Query:   477 CLRKSPVSKDVDLRALAKYTQGFSGADITEIC-QRACKYAI---RENIEKDIE----RER 528
             CL  +P S   DL  +    Q FS   +     Q  C+      R+ +  DI     R R
Sbjct:  1150 CL-SAPSSMTQDLPGVPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGRYR 1208

Query:   529 RRS-ENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSR 583
              +S E+              I   H   ++ + R S+S+ D +     Y++F    ++  
Sbjct:  1209 SQSGEDESMNQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKN 1268

Query:   584 GFGSEFR 590
               G+ FR
Sbjct:  1269 QSGTMFR 1275


>MGI|MGI:2385054 [details] [associations]
            symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
            membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
            [GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
            "protein targeting to peroxisome" evidence=ISO] [GO:0007031
            "peroxisome organization" evidence=ISO] [GO:0008022 "protein
            C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
            translocation" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
            [GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
            GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
            GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
            HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
            EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
            ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
            PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
            Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
            GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
            Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
            GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
        Length = 981

 Score = 586 (211.3 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 138/357 (38%), Positives = 201/357 (56%)

Query:   215 KIAKDTHGYVGADLAALCTE---AALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKT 271
             ++A+   G+V  DL AL T    AA   IR       L +E      +    +  E F  
Sbjct:   623 QLARRCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQ 682

Query:   272 ALG---TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
             AL    T++  A+      +P+V+W D+GGL++VK+E+ ET+Q P+EHPE     G+  S
Sbjct:   683 ALDQLQTAHSQAVGAP--RIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS 739

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
              G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +AP
Sbjct:   740 -GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798

Query:   389 CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 448
             C++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DP
Sbjct:   799 CIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDP 857

Query:   449 ALLRPGRLDQLIYIPLP-DEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITE 506
             ALLRPGR D+L+++    D  S+L++  A  RK  +   V L   L       +GAD+  
Sbjct:   858 ALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYS 917

Query:   507 ICQRACKYAIRENIEKDIER--ERRRSENPXXXXXXXXXXXXXIKAVHFEESMKYAR 561
             +C  A   A++  + +D+E   E R S                  +V  +E ++Y R
Sbjct:   918 LCSDAMMTALKRRV-RDLEEGLELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKR 973

 Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 59/228 (25%), Positives = 91/228 (39%)

Query:   293 WEDIG--GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             W+ +   GLE +  EL   ++ P   P      G S    VL  GPPG GKT    A  +
Sbjct:   431 WDSLSPPGLEALVNELCAILK-PHLQPGGTLLTGTSC---VLLQGPPGSGKTTAVTAACS 486

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 + + V    L        E  ++  F +AR+  P VL    +D +           
Sbjct:   487 RLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLLGRDRDGLGEDA 546

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNR-PDI-IDPALLRPGRLDQLIYIPLPDEE 468
                    L  LL + D +S    + ++  T+R  D+  D     P  L+    +P+  E 
Sbjct:   547 RVAAT--LRHLLLDEDALSRCPPLMVVATTSRVQDLPTDVQTAFPHELE----VPVLSEA 600

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI----TEICQRAC 512
              RL I +A     P+ ++V+L  LA+   GF   D+    T  C+ AC
Sbjct:   601 QRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAAC 648


>UNIPROTKB|A7YSY2 [details] [associations]
            symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
            protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
            GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
            EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
            UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
            Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
            InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
            Uniprot:A7YSY2
        Length = 767

 Score = 400 (145.9 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
 Identities = 94/258 (36%), Positives = 137/258 (53%)

Query:   270 KTALGTSN-PSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
             +T +  S  P +  E   EVP      +GGL      L+E ++ P+ +P      G+   
Sbjct:   181 RTHISLSEVPPSEEEPQPEVP------LGGLSEAADSLRELLRLPLRYPRALASLGLEVP 234

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA- 387
             +GVL  GPPG GKT L +A+A E  A  ++V  P L     GE+E NVR IF +AR+ A 
Sbjct:   235 RGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELAS 294

Query:   388 --PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDI 445
               P +LF DE+D++  +                 Q+LT +DG+   + V ++G+TNRPD 
Sbjct:   295 RRPTLLFLDEVDALCPRRGGPHQAPESRVVA---QVLTLLDGIGEDREVVVVGSTNRPDA 351

Query:   446 IDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADIT 505
             +DPAL RPGR D+ + I  P    R  I +    K P+S  VDL  LA+ T G+ GAD+T
Sbjct:   352 LDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLT 411

Query:   506 EICQRACKYAIRENIEKD 523
              +C+ A   A+  + EK+
Sbjct:   412 ALCREAAMQALLHS-EKN 428

 Score = 380 (138.8 bits), Expect = 3.3e-56, Sum P(4) = 3.3e-56
 Identities = 83/218 (38%), Positives = 127/218 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAA+Q +       + ++ TID         TD  F  A   
Sbjct:   398 LAEMTVGYVGADLTALCREAAMQALLHSEK--NQDNPTIDE--------TD--FLEAFKK 445

Query:   276 SNPSALRET--VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R    V ++  V WE IGGLE+VK +L++++++P++ P +F + G++  KGVL 
Sbjct:   446 IQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLL 505

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L +A+A  C+ +F+SV G +L + + G+SE  + ++F +AR + P ++F 
Sbjct:   506 YGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFL 565

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             DE+DSI                  L+ LL E+DG+  K
Sbjct:   566 DEIDSILGSRSISRTECNVQDRV-LSVLLNELDGVGLK 602

 Score = 246 (91.7 bits), Expect = 3.3e-56, Sum P(4) = 3.3e-56
 Identities = 45/86 (52%), Positives = 61/86 (70%)

Query:   434 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALA 493
             V ++ ATNRPD++D ALLRPGRLD++IYIP PDE+ RL I K C + +P+  DV L  +A
Sbjct:   636 VIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVA 695

Query:   494 KYTQGFSGADITEICQRACKYAIREN 519
               T  FSGAD+  +C+ A   A++EN
Sbjct:   696 AETCFFSGADLGNLCKEAALLALQEN 721

 Score = 51 (23.0 bits), Expect = 3.3e-56, Sum P(4) = 3.3e-56
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQAFAQ 577
             +K  HF ES+K  + S+S  D+  Y+   Q
Sbjct:   728 VKQEHFLESLKTVKPSLSHKDLTLYKNLFQ 757

 Score = 38 (18.4 bits), Expect = 3.3e-56, Sum P(4) = 3.3e-56
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query:   181 VAPDTEIFCEGEPVR 195
             +APD+  F EG P++
Sbjct:     1 MAPDSGSFPEGPPLK 15


>UNIPROTKB|P96281 [details] [associations]
            symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
            species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
            wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
            Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
            GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
            EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
            SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
            RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
            EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
            GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
            KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
            TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
            Uniprot:P96281
        Length = 728

 Score = 534 (193.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
 Identities = 123/323 (38%), Positives = 185/323 (57%)

Query:   199 ENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEI 258
             E  L+ V   D+  + +IA  T G+V ADLAAL  EAAL+    +             ++
Sbjct:   381 EALLNPVPTGDLN-LDEIASRTPGFVVADLAALVREAALRAA-SRASADGRPPMLHQDDL 438

Query:   259 LNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPE 318
             L ++        T +   + SA  E  V V +V  +D+G +   K+ L E V +P++HP+
Sbjct:   439 LGAL--------TVIRPLSRSASDE--VTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPD 488

Query:   319 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 378
              F + G+ P +GVL YGPPGCGKT + +A+A+  Q +  +VKG EL+  W G SE  VRE
Sbjct:   489 TFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRE 548

Query:   379 IFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIG 438
             +F +AR SAP ++F DELD++A +                  LLTE+DG+   + V ++G
Sbjct:   549 LFRRARDSAPSLVFLDELDALAPRRGQSFDSGVSDRVVAA--LLTELDGIDPLRDVVMLG 606

Query:   439 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQG 498
             ATNRPD+IDPALLRPGRL++L+++  PD  +R +I +   +  P+S DVDL  +A    G
Sbjct:   607 ATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDG 666

Query:   499 FSGADITEICQRACKYAIRENIE 521
             +S AD   + + A   A+R +I+
Sbjct:   667 YSAADCVALLREAALTAMRRSID 689

 Score = 196 (74.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
 Identities = 66/283 (23%), Positives = 117/283 (41%)

Query:   230 ALCTEAALQCIREKMDVIDLE-DETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV 288
             AL     +    E + V  ++ D  +  +  NS+         A+GTS      +  +  
Sbjct:   152 ALAAAVGISWTSELLTVTGVDPDGPVSVQP-NSLVTWGAGVPAAMGTSTAG---QVSISS 207

Query:   289 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 348
             P +  E++ G +    +L E ++  ++ P   +  G   + GVL  GP G GK  L +A+
Sbjct:   208 PEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV 267

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
              +      +++ GPE+  +  G+    V       R     VL   + D++         
Sbjct:   268 CDG--RRLVTLDGPEIGALAAGDRVKAVASAVQAVRHEGG-VLLITDADALLPAAAEPVA 324

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 468
                         +L+E+    A   V +I  + RPD +D  L  P   D+ + +PLPD  
Sbjct:   325 SL----------ILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAA 374

Query:   469 SRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             +R  + +A L   P   D++L  +A  T GF  AD+  + + A
Sbjct:   375 TRKSLLEALLNPVPTG-DLNLDEIASRTPGFVVADLAALVREA 416

 Score = 61 (26.5 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
 Identities = 23/83 (27%), Positives = 34/83 (40%)

Query:    36 AINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRS 95
             A++    VV LHP+ +  L     D + + G +    V    A DT     + ++ V  S
Sbjct:    20 AVDSRRGVVRLHPNAIAALGIREWDAVSLTGSRTTAAVAGLAAADTAVGT-VLLDDVTLS 78

Query:    96 NLRVRLGDVVSVHQCADVKYGKR 118
             N  +R G  V V       YG R
Sbjct:    79 NAGLREGTEVIVSPVT--VYGAR 99


>UNIPROTKB|Q13608 [details] [associations]
            symbol:PEX6 "Peroxisome assembly factor 2" species:9606
            "Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
            organization" evidence=IMP] [GO:0016887 "ATPase activity"
            evidence=IMP] [GO:0008022 "protein C-terminus binding"
            evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006625 "protein targeting to
            peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
            evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
            translocation" evidence=IMP] [GO:0050821 "protein stabilization"
            evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
            "ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
            GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
            Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
            HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
            EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
            EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
            RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
            SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
            PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
            Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
            CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
            MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
            PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
            OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
            ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
            Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
        Length = 980

 Score = 582 (209.9 bits), Expect = 9.0e-56, P = 9.0e-56
 Identities = 131/320 (40%), Positives = 194/320 (60%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMDVI--DLEDETIDAEILNS-MAVTDEHFK 270
             ++A+   G+V  DL AL T ++   C R K   +   L +E  + E+  +   +  E F 
Sbjct:   622 QLARRCAGFVVGDLYALLTHSSRAACTRIKNSGLAGGLTEED-EGELCAAGFPLLAEDFG 680

Query:   271 TALG---TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
              AL    T++  A+     ++P+V+W D+GGL+ VK+E+ ET+Q P+EHPE     G+  
Sbjct:   681 QALEQLQTAHSQAVGAP--KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR 737

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
             S G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +A
Sbjct:   738 S-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA 796

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             PC++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++D
Sbjct:   797 PCIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLD 855

Query:   448 PALLRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADIT 505
             PALLRPGR D+L+++    D  S+L++  A  RK  +   V L   L       +GAD+ 
Sbjct:   856 PALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLY 915

Query:   506 EICQRACKYAIRENIEKDIE 525
              +C  A   A++  +  D+E
Sbjct:   916 SLCSDAMTAALKRRVH-DLE 934

 Score = 159 (61.0 bits), Expect = 8.5e-08, P = 8.5e-08
 Identities = 47/191 (24%), Positives = 82/191 (42%)

Query:   325 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 384
             ++ +  VL  GPPGCGKT +  A  +    + + V    L     G  E  ++ IF +AR
Sbjct:   460 LTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRAR 519

Query:   385 QSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPD 444
             +  P VL    +D +                  L  LL   D +++   + ++  T+R  
Sbjct:   520 RCRPAVLLLTAVDLLGRDRDGLGEDARVMAV--LRHLLLNEDPLNSCPPLMVVATTSRAQ 577

Query:   445 IIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI 504
              + PA ++     +L  +P   E  RL I +A     P+ ++V+L  LA+   GF   D+
Sbjct:   578 DL-PADVQTAFPHEL-EVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDL 635

Query:   505 TEICQRACKYA 515
               +   + + A
Sbjct:   636 YALLTHSSRAA 646


>UNIPROTKB|A5GFQ7 [details] [associations]
            symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
            "Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
            [GO:0006625 "protein targeting to peroxisome" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
            stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
            evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0016561 "protein import into peroxisome matrix, translocation"
            evidence=ISS] [GO:0008022 "protein C-terminus binding"
            evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
            GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
            GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
            GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
            HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
            GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
            UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
            Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
            ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
        Length = 969

 Score = 581 (209.6 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 131/319 (41%), Positives = 194/319 (60%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMD--VIDLEDETIDAEILNS-MAVTDEHFK 270
             ++A+   G+V  DL AL T ++   C R K       L +E  + E+  +   +  E   
Sbjct:   611 QLARRCAGFVVGDLYALLTHSSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDLG 669

Query:   271 TALGTSNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
              AL     SA  + V   ++P+V+W D+GGL+ VK+E+ ET+Q P+EHPE     G+  S
Sbjct:   670 QALEQLQ-SAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS 727

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
              G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +AP
Sbjct:   728 -GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 786

Query:   389 CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 448
             C++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DP
Sbjct:   787 CIIFFDELDSLAPSRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDP 845

Query:   449 ALLRPGRLDQLIYIPLP-DEESRLQIFKACLRKSPVSKDVDLRALAKYTQG-FSGADITE 506
             ALLRPGR D+L+++    D  S+L++  A  RK  +   V L A+  +     +GAD+  
Sbjct:   846 ALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYS 905

Query:   507 ICQRACKYAIRENIEKDIE 525
             +C  A   A++  + +D+E
Sbjct:   906 LCADAMTAALKRRV-RDLE 923

 Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 45/185 (24%), Positives = 78/185 (42%)

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             VL  GPPG GKT    A       + + V    L     G  E  ++  F +AR+  P V
Sbjct:   455 VLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 514

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             L    +D +                  L +LL + D +++   + ++  T+R   + PA 
Sbjct:   515 LLLTAVDLLGRDRDGLGEDARVVAT--LRRLLLDEDPLTSHPPLMVVATTSRAQDL-PAD 571

Query:   451 LRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQR 510
             ++     +L  +P+  E  RL I +A     P+ ++V+L  LA+   GF   D+  +   
Sbjct:   572 VQTAFPHEL-EVPVLSEGQRLSILQALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTH 630

Query:   511 ACKYA 515
             + + A
Sbjct:   631 SSRAA 635


>DICTYBASE|DDB_G0289867 [details] [associations]
            symbol:pex1 "peroxisomal biogenesis factor 1"
            species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
            activity, coupled" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
            "peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
            targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
            membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
            PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
            GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
            EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
            GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
            ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
            KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
        Length = 1227

 Score = 566 (204.3 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
 Identities = 123/324 (37%), Positives = 188/324 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTAL 273
             K +    GY+G D+  +   +  L  I+E  +  +  D+  D  I+    +     K   
Sbjct:   791 KFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFSIIE----KAKE 846

Query:   274 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
             G + P  L+   +    + W+DIGGL++V+  L+ET+++P ++P+ F+   +    G+L 
Sbjct:   847 GYT-PITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILL 905

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGP GCGKTLLA AIA EC  NFISVKGPELL  + G SE  VR++F +A  + PCVLFF
Sbjct:   906 YGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFF 965

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRP 453
             DE DSIA +               +NQ LT++DG+     V+++ AT+RPD+IDPALLRP
Sbjct:   966 DEFDSIAPRRGHDNSGVTDRV---VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRP 1022

Query:   454 GRLDQLIYIPLPDEESRLQIFKACLR-KSPVSKDVDLRALAKYTQGFSGADITEICQRAC 512
             GRLD+ +Y  +P+   RL I   CL+ K  +S  + L  L+  TQ ++GAD+  +   A 
Sbjct:  1023 GRLDKSLYCNIPEFNERLDIL-TCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQ 1081

Query:   513 KYAIRE---NIEKDIERERRRSEN 533
               +I E   ++E++ +R+R+  E+
Sbjct:  1082 LKSIHEWMNHLEEEKKRKRKEKED 1105

 Score = 47 (21.6 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query:   552 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 584
             H + ++K +  S+S+++ +KY+       + RG
Sbjct:  1179 HIDLALKESSPSISESERKKYERIYNNFLKERG 1211


>UNIPROTKB|E1B8F6 [details] [associations]
            symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0050821 "protein stabilization" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
            "protein complex binding" evidence=IEA] [GO:0016561 "protein import
            into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
            GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
            GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
            RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
            Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
            NextBio:20876581 Uniprot:E1B8F6
        Length = 980

 Score = 580 (209.2 bits), Expect = 1.5e-55, P = 1.5e-55
 Identities = 129/318 (40%), Positives = 191/318 (60%)

Query:   215 KIAKDTHGYVGADLAALCTEAA-LQCIREKMD--VIDLEDETIDAEILNS-MAVTDEHFK 270
             ++A+   G+V  DL AL T ++   C R K       L +E  + E+  +   +  E F 
Sbjct:   622 QLARRCAGFVVGDLFALLTHSSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDFG 680

Query:   271 TALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
              AL     +  +      +P+V+W D+GGL+ VK+E+ ET+Q P+EHPE     G+  S 
Sbjct:   681 QALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS- 738

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 389
             G+L +GPPG GKTLLAKA+A EC   F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC
Sbjct:   739 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 798

Query:   390 VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPA 449
             ++FFDELDS+A                 ++QLL E+DG+ + + VF+IGATNRPD++DPA
Sbjct:   799 IIFFDELDSLAPNRGRSGDSGGVMDRV-VSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 857

Query:   450 LLRPGRLDQLIYIPL-PDEESRLQIFKACLRKSPVSKDVDL-RALAKYTQGFSGADITEI 507
             LLRPGR D+L+++ +  D  S+L++  A  RK  +   V L   L       +GAD+  +
Sbjct:   858 LLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSL 917

Query:   508 CQRACKYAIRENIEKDIE 525
             C  A   A++  + +D+E
Sbjct:   918 CSDAMTAALKRRV-RDLE 934

 Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
 Identities = 44/185 (23%), Positives = 78/185 (42%)

Query:   331 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 390
             VL  GPPG GKT    A  +    + + V    L     G  E  ++  F +AR+  P V
Sbjct:   466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 525

Query:   391 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 450
             L    +D +                  L  LL + D +++   + ++  T+R   + PA 
Sbjct:   526 LLLTAVDLLGRDRDGLGEDARVVAT--LRHLLLDEDPLASCPPLMVVATTSRAQDL-PAD 582

Query:   451 LRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQR 510
             ++     +L  +P+  E  RL + +A     P+ ++V+L  LA+   GF   D+  +   
Sbjct:   583 VQTAFPHEL-EVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVGDLFALLTH 641

Query:   511 ACKYA 515
             + + A
Sbjct:   642 SSRAA 646


>UNIPROTKB|F6UUI0 [details] [associations]
            symbol:SPATA5L1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
            Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
        Length = 789

 Score = 399 (145.5 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
 Identities = 85/231 (36%), Positives = 129/231 (55%)

Query:   296 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 355
             +GGL      L+E ++ P+ +P      G++  +GVL  GPPG GKT L +A+A E  A 
Sbjct:   236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295

Query:   356 FISVKGPELLTMWFGESEANVREIFDKARQSA---PCVLFFDELDSIATQXXXXXXXXXX 412
              ++V  P L     GE+E NVR +F +AR+ A   P +LF DE+D++  +          
Sbjct:   296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355

Query:   413 XXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ 472
                    Q+LT +DG+   + V ++ +TNRPD +DPAL RPGR D+ + I  P  + R  
Sbjct:   356 RAVA---QVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKA 412

Query:   473 IFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             I +    K P+S  VDL  LA+ T G+ GAD+T +C+ A  +A+  + EK+
Sbjct:   413 ILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKN 462

 Score = 377 (137.8 bits), Expect = 2.6e-55, Sum P(3) = 2.6e-55
 Identities = 81/220 (36%), Positives = 128/220 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAAL  +        L  E    +  ++ A+ +  F  A   
Sbjct:   432 LAEMTVGYVGADLTALCREAALHAL--------LHSE----KNKDNPAIDETDFFEAFKK 479

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R  +  +++  V+WE IGGLE+VK +L++++++P++ P +F + G++  KGVL 
Sbjct:   480 IQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLL 539

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L +A+A  C  +F+SV G +L + + G+SE  + ++F +AR + P ++F 
Sbjct:   540 YGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFL 599

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT 433
             DE+DSI                  L+ LL E+DG+  K T
Sbjct:   600 DEIDSILGSRSISKTECNVQERV-LSVLLNELDGVGLKTT 638

 Score = 247 (92.0 bits), Expect = 2.6e-55, Sum P(3) = 2.6e-55
 Identities = 46/88 (52%), Positives = 61/88 (69%)

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA 491
             + V I+ ATNRPD++D ALLRPGRLD++IYIP PDE+ RL I K C +  P+  DV L  
Sbjct:   656 RNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLEN 715

Query:   492 LAKYTQGFSGADITEICQRACKYAIREN 519
             +A  T  FSGAD+  +C+ A   A++EN
Sbjct:   716 IAAETCFFSGADLGNLCKEAALLALQEN 743

 Score = 52 (23.4 bits), Expect = 2.6e-55, Sum P(3) = 2.6e-55
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGS 587
             +K  HF +S+K  + S+S  D+  Y+     L Q +GF +
Sbjct:   750 VKQEHFLKSLKTVKPSLSPEDLTLYE----NLFQKQGFSN 785


>UNIPROTKB|I3LPI5 [details] [associations]
            symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060152 "microtubule-based peroxisome localization"
            evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
            "protein import into peroxisome matrix" evidence=IEA] [GO:0008022
            "protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
            GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
            InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
            EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
        Length = 1286

 Score = 547 (197.6 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
 Identities = 125/333 (37%), Positives = 193/333 (57%)

Query:   183 PDTEIFCEGEPVRREDENRLD-EVG-YDDVGGVRKIAKDTHGYVGADLAALCTEAALQCI 240
             PD E  CE   +    +N+LD ++  + D+  +++IAK+T G+V  D   L   A    I
Sbjct:   743 PDQEQRCE--ILHNAIKNKLDCDMNSFTDLD-LKRIAKETEGFVARDFIVLVDRA----I 795

Query:   241 REKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGL 299
               +     L ++++       + +T   F+ AL    P++LR   +  P ++ W+ IGGL
Sbjct:   796 HSR-----LSNQSVSTR--EELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGL 848

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
               V++ L +T+Q P ++PE F    +    GVL YGPPG GKTLLA  +A E     + +
Sbjct:   849 REVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVL 908

Query:   360 K-GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXL 418
             + GPELL+ + G SE  VR+IF +A+ + PC+LFFDE +SIA +               +
Sbjct:   909 RYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---V 965

Query:   419 NQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL 478
             NQLLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I     
Sbjct:   966 NQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLS 1025

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
                P+++DVDL+ +A  T  F+GAD+  +   A
Sbjct:  1026 ASLPLAEDVDLQHVASLTDSFTGADLKALLYNA 1058

 Score = 45 (20.9 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   168 FKVIETDPPEYCVVAPDTEIF 188
             F+V ++ PP  C  +P T +F
Sbjct:   289 FRVCKSQPPSICNASP-TSVF 308

 Score = 38 (18.4 bits), Expect = 6.7e-55, Sum P(3) = 6.7e-55
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query:   548 IKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSRGFGSEFR 590
             I   H   ++ + R S+S+ D +     Y+ F    ++    G+ FR
Sbjct:  1232 ISQSHLMTALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTVFR 1278


>UNIPROTKB|E2RLT2 [details] [associations]
            symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060152 "microtubule-based peroxisome
            localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
            evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
            [GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
            [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
            GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
            CTD:5189 InterPro:IPR015343 Pfam:PF09263
            GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
            ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
            KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
        Length = 1267

 Score = 567 (204.7 bits), Expect = 9.1e-55, Sum P(2) = 9.1e-55
 Identities = 130/331 (39%), Positives = 190/331 (57%)

Query:   183 PDTEIFCEGEPVRREDENRLD-EVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIR 241
             P+ E  CE   +    +N+LD ++       +++IAK+T G+V  D   L   A    + 
Sbjct:   724 PNQEQRCE--ILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLS 781

Query:   242 EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLE 300
              +   I   +E +         +T   F+ AL    P++LR   +  P ++ W+ IGGL 
Sbjct:   782 HQR--ITTREELV---------LTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLH 830

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
              V++ L +T+Q P ++PE F    +    GVL YGPPG GKTLLA  IA E   NFISVK
Sbjct:   831 EVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVK 890

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             GPELL+ + G SE  VR+IF +A+ + PC+LFFDE +SIA +               +NQ
Sbjct:   891 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQ 947

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             LLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I       
Sbjct:   948 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 1007

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRA 511
              P++ DVDL+ +A  T  F+GAD+  +   A
Sbjct:  1008 LPLADDVDLQHVASVTNSFTGADLKALLYNA 1038

 Score = 38 (18.4 bits), Expect = 9.1e-55, Sum P(2) = 9.1e-55
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query:   548 IKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSRGFGSEFR 590
             I   H   ++ + R S+S+ D +     Y+ F    ++    G+ FR
Sbjct:  1213 ISQSHLMAALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTMFR 1259


>UNIPROTKB|F1SN45 [details] [associations]
            symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
            EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
        Length = 755

 Score = 412 (150.1 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
 Identities = 93/251 (37%), Positives = 138/251 (54%)

Query:   270 KTALGTSN-PSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
             +T +G S  P +  E   EVP      +GGL      L+E ++ P+ +P  F   G++  
Sbjct:   181 RTHIGLSGVPPSESEPPPEVP------LGGLAEAADSLRELLRLPLLYPRSFASLGLAVP 234

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA- 387
             +GVL  GPPG GKT L +A+A E  A  ++V  P L     GE+E NVR +F +A++ A 
Sbjct:   235 RGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAG 294

Query:   388 --PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDI 445
               P +LF DE+D++  +                 Q+LT +DG+S  + V ++G+TNRPD 
Sbjct:   295 RRPTLLFLDEVDALCPRRGGPHQAPESRVVA---QVLTLLDGISGDREVVVVGSTNRPDA 351

Query:   446 IDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADIT 505
             +DPAL RPGR D+ + I  P    R  I +    K P+S  VDL  LA+ T G+ GAD+T
Sbjct:   352 LDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLT 411

Query:   506 EICQRACKYAI 516
              +C+ A  +A+
Sbjct:   412 ALCREAAMHAL 422

 Score = 371 (135.7 bits), Expect = 9.8e-55, Sum P(3) = 9.8e-55
 Identities = 81/218 (37%), Positives = 125/218 (57%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAA+  +       + ++  ID EI          F  A   
Sbjct:   398 LAEMTVGYVGADLTALCREAAMHALLHSGK--NQDNPLID-EI---------DFLEAFKK 445

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R  +  ++V  + WE IGGLE+ KR+L++++++P++ P +F + G++  KGVL 
Sbjct:   446 IQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLL 505

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L +A+A  C  +F+SV G +L + + G+SE  + ++F +AR + P V+F 
Sbjct:   506 YGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFL 565

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             DE+DSI                  L+ LL E+DG+  K
Sbjct:   566 DEIDSILGSRSISKTGCNVQERV-LSVLLNELDGVGLK 602

 Score = 250 (93.1 bits), Expect = 9.8e-55, Sum P(3) = 9.8e-55
 Identities = 48/86 (55%), Positives = 61/86 (70%)

Query:   434 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALA 493
             V I+ ATNRPD++D ALLRPGRLD++IYIP PDE+SRL I + C +  PV  DV L  LA
Sbjct:   624 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLA 683

Query:   494 KYTQGFSGADITEICQRACKYAIREN 519
               T  FSGAD+  +C+ A   A++EN
Sbjct:   684 AETCLFSGADLGNLCKEAALLALQEN 709

 Score = 50 (22.7 bits), Expect = 9.8e-55, Sum P(3) = 9.8e-55
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 585
             +K  HF +S+K  + S+S  D+  Y+     L Q +GF
Sbjct:   716 VKQEHFLKSLKTVKPSLSHKDLALYK----NLFQKQGF 749


>UNIPROTKB|E2RCK9 [details] [associations]
            symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
            "protein targeting to peroxisome" evidence=IEA] [GO:0005778
            "peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
            binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
            PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
            Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
            PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
            GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
            Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
        Length = 1416

 Score = 567 (204.7 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
 Identities = 130/331 (39%), Positives = 190/331 (57%)

Query:   183 PDTEIFCEGEPVRREDENRLD-EVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIR 241
             P+ E  CE   +    +N+LD ++       +++IAK+T G+V  D   L   A    + 
Sbjct:   873 PNQEQRCE--ILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLS 930

Query:   242 EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLE 300
              +   I   +E +         +T   F+ AL    P++LR   +  P ++ W+ IGGL 
Sbjct:   931 HQR--ITTREELV---------LTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLH 979

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
              V++ L +T+Q P ++PE F    +    GVL YGPPG GKTLLA  IA E   NFISVK
Sbjct:   980 EVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVK 1039

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             GPELL+ + G SE  VR+IF +A+ + PC+LFFDE +SIA +               +NQ
Sbjct:  1040 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQ 1096

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             LLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I       
Sbjct:  1097 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 1156

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRA 511
              P++ DVDL+ +A  T  F+GAD+  +   A
Sbjct:  1157 LPLADDVDLQHVASVTNSFTGADLKALLYNA 1187

 Score = 38 (18.4 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query:   548 IKAVHFEESMKYARRSVSDADIRK----YQAFAQTLQQSRGFGSEFR 590
             I   H   ++ + R S+S+ D +     Y+ F    ++    G+ FR
Sbjct:  1362 ISQSHLMAALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTMFR 1408


>UNIPROTKB|Q9BVQ7 [details] [associations]
            symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
            protein 1" species:9606 "Homo sapiens" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
            GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
            OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
            EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
            IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
            UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
            STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
            PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
            Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
            GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
            HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
            InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
            Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
            Uniprot:Q9BVQ7
        Length = 753

 Score = 419 (152.6 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
 Identities = 96/257 (37%), Positives = 141/257 (54%)

Query:   270 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
             + +LG   PS  +    EVP      +GGL      L+E ++ P+ +P      G++  +
Sbjct:   183 RVSLGGEPPSEAQPQP-EVP------LGGLSEAADSLRELLRLPLRYPRALTALGLAVPR 235

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA-- 387
             GVL  GPPG GKT L +A+A E  A  ++V  P L     GE+E NVR +F +AR+ A  
Sbjct:   236 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASR 295

Query:   388 -PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
              P +LF DE+D++  Q                 Q+LT +DG S  + V ++GATNRPD +
Sbjct:   296 GPSLLFLDEMDALCPQRGSRAPESRVVA-----QVLTLLDGASGDREVVVVGATNRPDAL 350

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPAL RPGR D+ + I  P  + R +I +    K P+S  VDL  LA+ T G+ GAD+T 
Sbjct:   351 DPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTA 410

Query:   507 ICQRACKYAIRENIEKD 523
             +C+ A  +A+  + EK+
Sbjct:   411 LCREAAMHALLHS-EKN 426

 Score = 376 (137.4 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
 Identities = 83/218 (38%), Positives = 127/218 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAA+  +       + ++  ID EI          F  A   
Sbjct:   396 LAEMTVGYVGADLTALCREAAMHALLHSEK--NQDNPVID-EI---------DFLEAFKN 443

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R  +  +++  V+WE+IGGLE+VK +L++++++P++ P +F + G++  KGVL 
Sbjct:   444 IQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLL 503

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L +A+A  C  +F+SV G +L + + G+SE  + +IF +AR S P +LF 
Sbjct:   504 YGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFL 563

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             DE+DSI                  L+ LL E+DG+  K
Sbjct:   564 DEIDSILG-ARSASKTGCDVQERVLSVLLNELDGVGLK 600

 Score = 246 (91.7 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
 Identities = 47/88 (53%), Positives = 60/88 (68%)

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA 491
             ++V II ATNRPD++D ALLRPGRLD++IYIP PD + RL I K C +  P+  DV L  
Sbjct:   620 RSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLEN 679

Query:   492 LAKYTQGFSGADITEICQRACKYAIREN 519
             LA  T  FSGAD+  +C  A   A++EN
Sbjct:   680 LAAETCFFSGADLRNLCTEAALLALQEN 707

 Score = 45 (20.9 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQ 573
             +K  HF +S+K  + S+S  D+  Y+
Sbjct:   714 VKQEHFLKSLKTVKPSLSCKDLALYE 739


>UNIPROTKB|E2QSC5 [details] [associations]
            symbol:SPATA5L1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
        Length = 747

 Score = 399 (145.5 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 85/231 (36%), Positives = 129/231 (55%)

Query:   296 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 355
             +GGL      L+E ++ P+ +P      G++  +GVL  GPPG GKT L +A+A E  A 
Sbjct:   192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251

Query:   356 FISVKGPELLTMWFGESEANVREIFDKARQSA---PCVLFFDELDSIATQXXXXXXXXXX 412
              ++V  P L     GE+E NVR +F +AR+ A   P +LF DE+D++  +          
Sbjct:   252 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 311

Query:   413 XXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ 472
                    Q+LT +DG+   + V ++ +TNRPD +DPAL RPGR D+ + I  P  + R  
Sbjct:   312 RAVA---QVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKA 368

Query:   473 IFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             I +    K P+S  VDL  LA+ T G+ GAD+T +C+ A  +A+  + EK+
Sbjct:   369 ILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKN 418

 Score = 368 (134.6 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
 Identities = 81/222 (36%), Positives = 129/222 (58%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAAL  +        L  E    +  ++ A+ +  F  A   
Sbjct:   388 LAEMTVGYVGADLTALCREAALHAL--------LHSE----KNKDNPAIDETDFFEAFKK 435

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R  +  +++  V+WE IGGLE+VK +L++++++P++ P +F + G++  KGVL 
Sbjct:   436 IQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLL 495

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA--NVREIFDKARQSAPCVL 391
             YGPPGC KT L +A+A  C  +F+SV G +L + + G+SE   + +++F +AR + P ++
Sbjct:   496 YGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIV 555

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKT 433
             F DE+DSI                  L+ LL E+DG+  K T
Sbjct:   556 FLDEIDSILGSRSISKTECNVQERV-LSVLLNELDGVGLKTT 596

 Score = 247 (92.0 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
 Identities = 46/88 (52%), Positives = 61/88 (69%)

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA 491
             + V I+ ATNRPD++D ALLRPGRLD++IYIP PDE+ RL I K C +  P+  DV L  
Sbjct:   614 RNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLEN 673

Query:   492 LAKYTQGFSGADITEICQRACKYAIREN 519
             +A  T  FSGAD+  +C+ A   A++EN
Sbjct:   674 IAAETCFFSGADLGNLCKEAALLALQEN 701

 Score = 52 (23.4 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGS 587
             +K  HF +S+K  + S+S  D+  Y+     L Q +GF +
Sbjct:   708 VKQEHFLKSLKTVKPSLSPEDLTLYE----NLFQKQGFSN 743


>UNIPROTKB|F1NLN4 [details] [associations]
            symbol:SPATA5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
            GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
            InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
            EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
            Uniprot:F1NLN4
        Length = 704

 Score = 495 (179.3 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
 Identities = 92/188 (48%), Positives = 128/188 (68%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG 274
             ++A   HGYVGADLAALC EA L  +R     +       D E+  S+ +    F   + 
Sbjct:   516 QLADSAHGYVGADLAALCKEAGLYALRR---ALGKRAHPSDTEVAGSVMIAFNDFLQGMK 572

Query:   275 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 334
                PSA+RE  V+VP V+W DIGGLE+VK +L++ V++P++HP+ F + G+ P KGVL Y
Sbjct:   573 DVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLY 632

Query:   335 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 394
             GPPGC KT++AKA+A+E   NF++VKGPEL+  + GESE  VREIF KAR  +P +LFFD
Sbjct:   633 GPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFD 692

Query:   395 ELDSIATQ 402
             E+D++A +
Sbjct:   693 EIDALAVE 700

 Score = 455 (165.2 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
 Identities = 94/238 (39%), Positives = 146/238 (61%)

Query:   289 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 348
             P V ++ IGGL +  + ++ETV+ P++  E F+ +G+SP +GVL YGPPG GKTL+AKAI
Sbjct:   313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372

Query:   349 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXX 408
             ANE  A+   + GPE+++ ++GESE+ +R+IF +A    P ++F DELD++  +      
Sbjct:   373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQN 432

Query:   409 XXXXXXXXXLNQLLTEMDGMSAKKT---VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                      L   LT MDG+ ++ +   + ++GATNRP  +D AL RPGR D+ I I +P
Sbjct:   433 EVEKRVVASL---LTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIP 489

Query:   466 DEESRLQIFKACLRKSPVSKDV-DLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             + + RL I +  L+K P S    ++  LA    G+ GAD+  +C+ A  YA+R  + K
Sbjct:   490 NAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRALGK 547

 Score = 53 (23.7 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query:    49 DTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
             ++M+      G  +L+     +  VC A         KI ++   + NL V +GD V+V
Sbjct:    44 NSMKAANICIGRPVLLTAAGGRQEVCTAWPTPGFPGGKIGLSDTTQKNLGVSVGDAVTV 102

 Score = 39 (18.8 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query:   181 VAPDTEI-FCEGEPVRREDENRLDEVGYDDVGGV 213
             ++  T I F E      ED +   +V YD +GG+
Sbjct:   290 ISSRTRINFIEARMNIAEDSDHGPQVTYDMIGGL 323


>UNIPROTKB|G4MQP9 [details] [associations]
            symbol:MGG_09299 "Peroxisome biosynthesis protein"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
            EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
            PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
            ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
            KEGG:mgr:MGG_09299 Uniprot:G4MQP9
        Length = 1250

 Score = 555 (200.4 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
 Identities = 124/310 (40%), Positives = 178/310 (57%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVT--DEHFKTAL 273
             IA  T GY+  DL  L T A    +   ++      ET + + LN++ V    + F  AL
Sbjct:   780 IAGRTDGYMPGDLLLLVTRARNAALSRSLE------ETAEDDHLNALGVPLGMQDFDEAL 833

Query:   274 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
                 P++L    ++   + ++ IGGL   +R L ET+QYP ++   F +  +    G+L 
Sbjct:   834 KGFTPASLHNVSLQSSTIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGLLL 893

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YG PGCGKTLLA A+A EC  NFISVKGPE+L  + G SE +VR++F++A  + PCVLFF
Sbjct:   894 YGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFF 953

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRP 453
             DE DSIA +               +NQLLT+MDG      V+++ AT+RPD+IDPALLRP
Sbjct:   954 DEFDSIAPKRGHDSTGVTDRV---VNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRP 1010

Query:   454 GRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDV-----DLRALAKYTQGFSGADITEIC 508
             GRLD+ +    P+ E RL I +A   K  V ++V     +L  LA+ T+GF+GAD+  + 
Sbjct:  1011 GRLDKSLICDFPNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALM 1070

Query:   509 QRACKYAIRE 518
               +   AI +
Sbjct:  1071 SNSQLEAIHD 1080

 Score = 40 (19.1 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query:   161 GGMRSVEFKVIETDP 175
             GG R  E  ++E DP
Sbjct:    89 GGSREQEISLVEIDP 103


>ZFIN|ZDB-GENE-060929-204 [details] [associations]
            symbol:spata5l1 "spermatogenesis associated 5-like
            1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
            GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
            EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
            UniGene:Dr.80583 Ensembl:ENSDART00000101660
            Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
            NextBio:20918042 Uniprot:F1Q8W3
        Length = 748

 Score = 436 (158.5 bits), Expect = 2.2e-40, P = 2.2e-40
 Identities = 93/253 (36%), Positives = 143/253 (56%)

Query:   270 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 329
             +T +  S    ++    +   V+   +GG+E+V   L+E + +P+ +P    + G+S  +
Sbjct:   163 RTCVDISTIQTVKHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPR 222

Query:   330 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA-- 387
             G+L  GPPG GKTLL + +A +  A  ++V GPE+     GESE N+R +F++AR +A  
Sbjct:   223 GLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADD 282

Query:   388 -PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
              PCVL  DE+DS+  +                 QLLT MD + + +   IIGATN+PD +
Sbjct:   283 GPCVLLIDEIDSLCPRRTGSSSAPENRLVA---QLLTLMDAIGSHEGFVIIGATNQPDSL 339

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             DPAL RPGR D+ + I +P    R  I K   R+ P+S DVDL  LA+ T G+ GAD++ 
Sbjct:   340 DPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSA 399

Query:   507 ICQRACKYAIREN 519
             + + A   A+R +
Sbjct:   400 LSREAALQAMRHS 412

 Score = 384 (140.2 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
 Identities = 83/218 (38%), Positives = 126/218 (57%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL+AL  EAALQ +R              +++  S  V+ +HF  AL  
Sbjct:   385 LAEMTCGYVGADLSALSREAALQAMRH-------------SQMGASEPVSMQHFMQALRH 431

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS LR ++   +   + WE IGGLE+VK +L++++++P+  PE F + G+S  +GVL 
Sbjct:   432 VQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLL 491

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L KA A+    +F S+ G EL + + G+SE  + ++F +AR  AP ++F 
Sbjct:   492 YGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFL 551

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             DE+DS+                  L+ LLTE+DG+  +
Sbjct:   552 DEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVR 589

 Score = 236 (88.1 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
 Identities = 44/88 (50%), Positives = 62/88 (70%)

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA 491
             K V I+ ATNRP+ +D ALLRPGRLDQ+IY+P PD ++RL + + C +  P+ +DV L  
Sbjct:   624 KDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLED 683

Query:   492 LAKYTQGFSGADITEICQRACKYAIREN 519
             LA  T+ FSGAD+  +C+ A   A+RE+
Sbjct:   684 LAAQTELFSGADLENLCKEAALLALRED 711


>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
            symbol:PF11_0314 "26S protease subunit
            regulatory subunit 6a, putative" species:5833 "Plasmodium
            falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0000502 "proteasome complex"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
            GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
            EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
            OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
            ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
            PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
            KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
        Length = 439

 Score = 526 (190.2 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 105/243 (43%), Positives = 151/243 (62%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V+E P+ ++ DIGGL+    +L E +  P+ H EKFEK G+ P KGVL +GPPG GKTLL
Sbjct:   177 VIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLL 236

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A++  A F+ + GP+L+ M+ G+    VR+ F+ A++ AP ++F DELD+I T+  
Sbjct:   237 ARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRF 296

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG S   TV +I ATNRPD +DPALLR GRLD+ I +P 
Sbjct:   297 DSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDI 524
             P+EESR +I +   RK  V KDV+   LA+ T  F+GA +  +C  A   A+R     +I
Sbjct:   357 PNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGAT-EI 415

Query:   525 ERE 527
             + E
Sbjct:   416 DHE 418

 Score = 41 (19.5 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query:   244 MDVIDLEDETIDAEILNSMAVTDEHFK 270
             ++ +DLEDE  + EI +   + D + K
Sbjct:    78 VESLDLEDEEEENEIKDEYDLYDNNLK 104

 Score = 38 (18.4 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 22/102 (21%), Positives = 42/102 (41%)

Query:   134 NLFDAYLKPYFTEAYRPV---RKGDLFLVRGGMRSVEFKVI-------ETDPPEYCVVAP 183
             +L+D  LK    E +R +   ++G   +++   R   F  +       E  P +   V  
Sbjct:    97 DLYDNNLK-LSHEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNK 155

Query:   184 DTEIFCEGEPVRREDENRLDEV------GYDDVGGVRKIAKD 219
             D+ +  +  P   ++  +  EV       Y D+GG+ K  +D
Sbjct:   156 DSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIED 197


>UNIPROTKB|Q8II60 [details] [associations]
            symbol:PF11_0314 "26S protease subunit regulatory subunit
            6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
            "proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
            activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
            "ATPase activity" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
            GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
            TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
            ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
            ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
            PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
            KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
        Length = 439

 Score = 526 (190.2 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 105/243 (43%), Positives = 151/243 (62%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V+E P+ ++ DIGGL+    +L E +  P+ H EKFEK G+ P KGVL +GPPG GKTLL
Sbjct:   177 VIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLL 236

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A++  A F+ + GP+L+ M+ G+    VR+ F+ A++ AP ++F DELD+I T+  
Sbjct:   237 ARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRF 296

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG S   TV +I ATNRPD +DPALLR GRLD+ I +P 
Sbjct:   297 DSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDI 524
             P+EESR +I +   RK  V KDV+   LA+ T  F+GA +  +C  A   A+R     +I
Sbjct:   357 PNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGAT-EI 415

Query:   525 ERE 527
             + E
Sbjct:   416 DHE 418

 Score = 41 (19.5 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query:   244 MDVIDLEDETIDAEILNSMAVTDEHFK 270
             ++ +DLEDE  + EI +   + D + K
Sbjct:    78 VESLDLEDEEEENEIKDEYDLYDNNLK 104

 Score = 38 (18.4 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 22/102 (21%), Positives = 42/102 (41%)

Query:   134 NLFDAYLKPYFTEAYRPV---RKGDLFLVRGGMRSVEFKVI-------ETDPPEYCVVAP 183
             +L+D  LK    E +R +   ++G   +++   R   F  +       E  P +   V  
Sbjct:    97 DLYDNNLK-LSHEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNK 155

Query:   184 DTEIFCEGEPVRREDENRLDEV------GYDDVGGVRKIAKD 219
             D+ +  +  P   ++  +  EV       Y D+GG+ K  +D
Sbjct:   156 DSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIED 197


>MGI|MGI:1918632 [details] [associations]
            symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
            [GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
            "cytosol" evidence=ISO] [GO:0006625 "protein targeting to
            peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
            [GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
            "protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
            binding" evidence=IEA] [GO:0015031 "protein transport"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
            "protein import into peroxisome matrix" evidence=ISO] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
            "protein complex binding" evidence=ISO] [GO:0042623 "ATPase
            activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
            peroxisome localization" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
            InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
            SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
            GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
            SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
            PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
            InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
            EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
            UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
            SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
            PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
            GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
            GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
            OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
            Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
        Length = 1284

 Score = 559 (201.8 bits), Expect = 6.8e-53, P = 6.8e-53
 Identities = 127/332 (38%), Positives = 189/332 (56%)

Query:   183 PDTEIFCEGEPVRREDENRL--DEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCI 240
             P+ E  CE   +    +N+L  D   + D+  ++ IAKDT  +V  D   L  + A+   
Sbjct:   741 PNPEQRCE--ILHSVVKNKLGCDISNFPDLD-LQCIAKDTEAFVARDFTVL-VDRAIHSS 796

Query:   241 REKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGL 299
               +      ED T+          T   F+ AL    P++LR   +  P ++ W+ IGGL
Sbjct:   797 LSRQHSSSREDLTL----------TTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGL 846

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
               V++ L +T+Q P ++PE F    +    G+L YGPPG GKTLLA  +A E   NFIS+
Sbjct:   847 HEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISI 906

Query:   360 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 419
             KGPELL+ + G SE  VR++F +A+ + PC+LFFDE +SIA +               +N
Sbjct:   907 KGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VN 963

Query:   420 QLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR 479
             QLLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I     +
Sbjct:   964 QLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSK 1023

Query:   480 KSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
                ++ DVDL+ +A  T  F+GAD+  +   A
Sbjct:  1024 SLALADDVDLQHVASVTDSFTGADLKALLYNA 1055


>UNIPROTKB|G4N5K9 [details] [associations]
            symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
            oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
            ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
            KEGG:mgr:MGG_13203 Uniprot:G4N5K9
        Length = 754

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 119/311 (38%), Positives = 177/311 (56%)

Query:   220 THGYVGADLAALCTE----AALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             TH Y G DL  L +      A +    + +    E +       ++   TD   + AL  
Sbjct:   406 THAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTESDVRPKPPADTAFYTDS-LEAALLE 464

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
               P+A+++  ++ P V W+DI G E+VKR+L+  V +     E+ +KF   P KG L YG
Sbjct:   465 IRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVHFITRPKEEIQKFIRVPPKGFLLYG 524

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
             PPGC KT+ A+A+A E   NF +VKG ELL M+ GESE  +R++F +AR +AP ++FFDE
Sbjct:   525 PPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESERQIRDLFSRARAAAPSMIFFDE 584

Query:   396 LDSIA-TQXXXXXXXXXXXXXXXLN---QLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             +DSIA ++               LN    LL EMDG    + VF++ ATNRP  +DPA++
Sbjct:   585 IDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALDPAIM 644

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D++IY+P PD  +R  I +       ++ DVD   LA+ T+G SGA++   CQ A
Sbjct:   645 RPGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDVDFARLAQLTEGNSGAEVAGTCQSA 704

Query:   512 CKYAIRENIEK 522
              K A+R ++++
Sbjct:   705 GKLAMRRSLDE 715


>RGD|1559939 [details] [associations]
            symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
            "Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
            "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
            evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
            [GO:0006625 "protein targeting to peroxisome" evidence=ISO]
            [GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
            "protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
            "biological_process" evidence=ND] [GO:0016558 "protein import into
            peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
            binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
            evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
            organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
            localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
            GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
            CTD:5189 InterPro:IPR015343 Pfam:PF09263
            GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
            IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
            Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
            UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
        Length = 1283

 Score = 557 (201.1 bits), Expect = 1.1e-52, P = 1.1e-52
 Identities = 123/331 (37%), Positives = 190/331 (57%)

Query:   183 PDTEIFCEGEPVRREDENRLD-EVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIR 241
             PD E  CE   +    +N+L  ++       ++ IAK+T  +V  D   L   A    + 
Sbjct:   740 PDQEQRCE--ILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLS 797

Query:   242 EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLE 300
              +      ++ T +      + +T   F+ AL    P++LR   +  P ++ W+ IGGL 
Sbjct:   798 RQ------QNPTREG-----LTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLH 846

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
              V++ L +T+Q P ++PE F    +    G+L YGPPG GKTLLA  +A E   NFIS++
Sbjct:   847 EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQ 906

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             GPELL+ + G SE  VR++F +A+ + PC+LFFDE +SIA +               +NQ
Sbjct:   907 GPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV---VNQ 963

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             LLT++DG+   + V+++ AT+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I     + 
Sbjct:   964 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKS 1023

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRA 511
              P++ DVDL+ +A  T+ F+GAD+  +   A
Sbjct:  1024 LPLADDVDLQHVASVTESFTGADLKALLYNA 1054


>TAIR|locus:2159557 [details] [associations]
            symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
            evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
            [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
            PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
            HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
            RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
            SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
            EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
            TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
            OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
            PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
        Length = 1130

 Score = 534 (193.0 bits), Expect = 4.2e-52, Sum P(2) = 4.2e-52
 Identities = 128/351 (36%), Positives = 185/351 (52%)

Query:   180 VVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQC 239
             + AP T     G  ++ E + RL +   +D+  +  +A    GY   DL  L   A    
Sbjct:   741 LAAPATSE--RGAILKHEIQKRLLDCS-EDI--LLNLAAKCEGYDAYDLEILVDRAVHAA 795

Query:   240 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE---TVVEVPNVNWEDI 296
             I   +    LE        ++   +  E F  A+    P A+R+   +  E   + WED+
Sbjct:   796 IGRHLP---LESN------ISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDV 846

Query:   297 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 356
             GG+ ++K  ++E ++ P + P+ F K  +     VL YGPPGCGKT +  A A  C   F
Sbjct:   847 GGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRF 906

Query:   357 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXX 416
             ISVKGPELL  + G SE  VR+IF KA  +APC+LFFDE DSIA +              
Sbjct:   907 ISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRV-- 964

Query:   417 XLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKA 476
              +NQ LTE+DG+     VF+  AT+RPD++DPALLRPGRLD+L+    P    RL+I   
Sbjct:   965 -VNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTV 1023

Query:   477 CLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
               RK  ++ D+DL  +A  T+GFSGAD+  +   A   A+ E + ++ + E
Sbjct:  1024 LSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPE 1074

 Score = 138 (53.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
 Identities = 58/218 (26%), Positives = 91/218 (41%)

Query:   320 FEKFGMSPSKG-VLFYGPPGCGKTLLAKAIAN--ECQ----ANFISVKGPELLTMWFGES 372
             F KF + PS G +L YGPPG GKT+LA+A A   E Q    A+ I V    L        
Sbjct:   585 FSKFKI-PSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHI 643

Query:   373 EANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM-DGMSAK 431
                +  +  +  + AP V+  D+LDSI +                L + LT++ D     
Sbjct:   644 HHVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEY 703

Query:   432 KT-------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPV- 483
             +        +  + +    + I   L   GR D  + +  P    R  I K  ++K  + 
Sbjct:   704 RNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLD 763

Query:   484 -SKDVDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
              S+D+ L   AK  +G+   D+  +  RA   AI  ++
Sbjct:   764 CSEDILLNLAAK-CEGYDAYDLEILVDRAVHAAIGRHL 800

 Score = 44 (20.5 bits), Expect = 4.2e-52, Sum P(2) = 4.2e-52
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query:    42 SVVVLHPDT-----MEKLQFFR-GDTILIKGKKRKDTVCIALADDTCEEPKIRMN 90
             S+  +HP+T     +E LQ       I +KG  +KD    AL     E  K+  N
Sbjct:   232 SIAYIHPETAKKHSLESLQLISVSPRIPLKGSAKKDE---ALNMKNSEASKVAEN 283


>FB|FBgn0028686 [details] [associations]
            symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
            species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
            regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
            "endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
            evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
            evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
            evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
            GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
            GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
            GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
            GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
            EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
            EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
            EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
            SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
            KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
            InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
            Uniprot:Q9V405
        Length = 413

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 115/284 (40%), Positives = 163/284 (57%)

Query:   253 TIDAEILNSMA--VTDEHFKTALGTSNPSALRETVV----EVPNVNWEDIGGLENVKREL 306
             TID E+L   A     +H    +    P A     +    E P+V++ DIGG++  K+E+
Sbjct:   113 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEI 172

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A+FI V G E + 
Sbjct:   173 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 292

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  +F     K  +S+D
Sbjct:   293 GFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSED 352

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ A  +A+REN    + KD E+
Sbjct:   353 VDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 396


>FB|FBgn0033564 [details] [associations]
            symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
            melanogaster" [GO:0007031 "peroxisome organization"
            evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
            GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
            GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
            UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
            RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
            EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
            UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
            OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
        Length = 897

 Score = 544 (196.6 bits), Expect = 7.9e-52, P = 7.9e-52
 Identities = 121/283 (42%), Positives = 168/283 (59%)

Query:   249 LEDETIDAEILNSMAVTD---EHFKTALGTSNPSALRETV--VEVPNVNWEDIGGLENVK 303
             L D  +  +I N +  T     HF   L T   S+  +++   +VP V W DIGGL  +K
Sbjct:   567 LYDNAVRMKIRNRLGRTTLDMSHFAKNL-TDMQSSFADSLGAPKVPKVYWSDIGGLAKLK 625

Query:   304 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 363
              E+Q ++  P++H     K  +  S G+L YGPPG GKTL+AKA+A EC  +F+SV+GPE
Sbjct:   626 DEIQSSIGLPLKHVHLMGK-NLRRS-GILLYGPPGTGKTLVAKAVATECNLSFLSVQGPE 683

Query:   364 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 423
             LL M+ G+SE NVRE+F +AR +APCVLF DELDS+A                 ++QLL 
Sbjct:   684 LLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRV-VSQLLA 742

Query:   424 EMDGMS---AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI-PLPDEESRLQIFKACLR 479
             EMDGMS     K +FI+ ATNRPD+IDPALLRPGR D+L Y+ P    E +  + +A  +
Sbjct:   743 EMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQ 802

Query:   480 KSPVSKDVDLRALAKYTQG-FSGADITEICQRACKYAIRENIE 521
             +  +   VD+  +A+  +   SGAD+  IC  A   A+R  I+
Sbjct:   803 RFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTID 845


>FB|FBgn0020369 [details] [associations]
            symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
            species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
            "endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
            regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
            "proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
            "proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
            evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
            "microtubule associated complex" evidence=IDA] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
            GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
            GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
            BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
            EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
            UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
            IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
            PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
            KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
            InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
            GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
            Uniprot:O18413
        Length = 405

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 117/311 (37%), Positives = 181/311 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  +  +  +  L  +  E   V+DL D+ ID   +     +A+ +E + 
Sbjct:    63 QLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL-DKNIDINDVTPNCRVALRNESYT 121

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E +GGL+   +E++E ++ PV+HPE F+  G++ 
Sbjct:   122 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 181

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+  +  FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   182 PKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA 241

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   242 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 301

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   302 PALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 361

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   362 CTEAGMYALRE 372


>RGD|1595990 [details] [associations]
            symbol:Spata5l1 "spermatogenesis associated 5-like 1"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
            GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
            IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
            Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
            UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
        Length = 747

 Score = 389 (142.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
 Identities = 86/231 (37%), Positives = 129/231 (55%)

Query:   296 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 355
             +GGL      L+E ++ P+ +P      G++  +GVL  GPPG GKT L +A+A E  A 
Sbjct:   195 LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 254

Query:   356 FISVKGPELLTMWFGESEANVREIFDKARQSA---PCVLFFDELDSIATQXXXXXXXXXX 412
              ++V  P L     GE+E NVR +F +A++ A   P +LF DE+D++  +          
Sbjct:   255 LLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPES 314

Query:   413 XXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ 472
                    Q+LT +DG+   + V ++GATNRPD +DPAL RPGR D+ + I  P  + R  
Sbjct:   315 RVVA---QVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREA 371

Query:   473 IFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             I      K P+S  +DL  LA+ T G+ GAD+T +C+ A   A+ +N EK+
Sbjct:   372 ILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKN-EKN 421

 Score = 358 (131.1 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
 Identities = 77/218 (35%), Positives = 125/218 (57%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A+ T GYVGADL ALC EAA   +        L++E       N+  + +  F  A   
Sbjct:   391 LAEMTVGYVGADLTALCREAATCAL--------LKNEKNQ----NNPKIEETDFLEAFKK 438

Query:   276 SNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 333
               PS+ R ++   ++  V WE IGGLE+VK +L++ V++P++ P++F + G++  KG+L 
Sbjct:   439 VQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLL 498

Query:   334 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 393
             YGPPGC KT L +A+A  C  +F+SV G +L + + G+SE  + ++F +AR + P ++F 
Sbjct:   499 YGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFL 558

Query:   394 DELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAK 431
             DE+DS+                  L+ LL E+DG+  +
Sbjct:   559 DEIDSVLGSRSVGSSGCDARERV-LSVLLNELDGVGVR 595

 Score = 244 (91.0 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
 Identities = 47/98 (47%), Positives = 67/98 (68%)

Query:   432 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA 491
             ++V I+ ATNRPD++D ALLRPGRLD+++Y+P PD E RL I K C    P+  +V L  
Sbjct:   615 RSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLEN 674

Query:   492 LAKYTQGFSGADITEICQRACKYAIREN-IEKD-IERE 527
             LA  T  FSGAD+  +C+ A  +A++EN +E   +E+E
Sbjct:   675 LAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQE 712

 Score = 39 (18.8 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
 Identities = 7/26 (26%), Positives = 16/26 (61%)

Query:   548 IKAVHFEESMKYARRSVSDADIRKYQ 573
             ++  HF E++K  + S++  D+  Y+
Sbjct:   709 VEQEHFTEALKTVKPSLTLKDLTFYE 734


>SGD|S000001680 [details] [associations]
            symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
            cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
            "ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
            targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
            membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
            "peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
            evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
            matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
            Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
            SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
            GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
            GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
            GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
            EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
            SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
            STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
            KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
            NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
            Uniprot:P24004
        Length = 1043

 Score = 540 (195.1 bits), Expect = 4.1e-51, P = 4.1e-51
 Identities = 114/258 (44%), Positives = 155/258 (60%)

Query:   264 VTDEHFKTALGTSNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEK 322
             VT E F  +L    PSALR   + +  N+ W DIG L N K  L ET+++P ++   F  
Sbjct:   666 VTRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVN 725

Query:   323 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDK 382
               +    G+L YG PGCGKTLLA A+A +C  NFISVKGPE+L  + G SE N+RE+F++
Sbjct:   726 CPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFER 785

Query:   383 ARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNR 442
             A+   PC+LFFDE DSIA +               +NQLLT+MDG      V+I+ AT+R
Sbjct:   786 AQSVKPCILFFDEFDSIAPKRGHDSTGVTDRV---VNQLLTQMDGAEGLDGVYILAATSR 842

Query:   443 PDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL---------RKSPVSKDVDLRALA 493
             PD+ID ALLRPGRLD+ +   +P E  RL I +A +         +K  + K+ DL+ +A
Sbjct:   843 PDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIA 902

Query:   494 KYTQGFSGADITEICQRA 511
             + T GFSGAD+  +C  A
Sbjct:   903 EKTAGFSGADLQGLCYNA 920


>TAIR|locus:2079742 [details] [associations]
            symbol:RPT5A "regulatory particle triple-A ATPase 5A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
            [GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
            sac development" evidence=IGI] [GO:0009555 "pollen development"
            evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
            evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
            "cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
            catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
            differentiation" evidence=RCA] [GO:0009630 "gravitropism"
            evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
            GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
            eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
            OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
            IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
            ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
            PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
            KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
            PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
        Length = 424

 Score = 506 (183.2 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
 Identities = 99/235 (42%), Positives = 144/235 (61%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P  ++ DIGGLE   +EL E +  P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct:   162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A +  A F+ + GP+L+ M+ G+    VR+ F  A++ APC++F DE+D+I T+  
Sbjct:   222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRF 281

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG S+ + + +I ATNR DI+DPAL+R GRLD+ I  P 
Sbjct:   282 DSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPH 341

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
             P EE+R +I +   RK  V  DV+   LA+ T  F+GA +  +C  A   A+R +
Sbjct:   342 PTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 396

 Score = 41 (19.5 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             ++ GDL     G+    + +++T P EY     D+ +          DE   ++  Y+D+
Sbjct:   130 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 173

Query:   211 GGVRK 215
             GG+ K
Sbjct:   174 GGLEK 178


>UNIPROTKB|Q6P380 [details] [associations]
            symbol:psmc5 "Putative uncharacterized protein MGC75584"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
            "proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
            "transcription factor binding" evidence=ISS] [GO:0031531
            "thyrotropin-releasing hormone receptor binding" evidence=ISS]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
            GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
            ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
            KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
            Uniprot:Q6P380
        Length = 414

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    72 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDI-DKNIDINDVTPNCRVALRNDSYT 130

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   131 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 190

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   191 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 250

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   251 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 310

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   311 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 370

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   371 CTEAGMYALRE 381


>DICTYBASE|DDB_G0272777 [details] [associations]
            symbol:DDB_G0272777 "AAA ATPase domain-containing
            protein" species:44689 "Dictyostelium discoideum" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
            eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
            ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
            KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
        Length = 738

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 116/330 (35%), Positives = 184/330 (55%)

Query:   193 PVRREDENRLDEVGY----DDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVID 248
             P++ +  N  D++      D    + +++K T G++  DL  LC   +L  +    +  +
Sbjct:   386 PLQYDTNNNNDDIDQCKIKDKEQFIVELSKITPGFLFKDLTKLCRTVSLLTVSSFEEEEE 445

Query:   249 LEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQE 308
              E+E  + EI  S  +    FK AL    PS L    V V NV W+ IGG + VK   ++
Sbjct:   446 EENEN-EKEIKISFKI----FKEALKFIKPSTLINFDVTVQNVKWDRIGGYKQVKERFRQ 500

Query:   309 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 368
              +++P+++ + F++  ++ S G+L +GP GCGK+L+ KAIA E   NFIS+KG ++ + W
Sbjct:   501 LIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKW 560

Query:   369 FGESEANVREIFDKARQSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDG 427
              GESE  +R++F  AR S+PC++FFDE+DS+  ++               L+QLL EMDG
Sbjct:   561 LGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDG 620

Query:   428 MSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKAC------LRKS 481
             +  K  +F+IG TN    ID ALLRPGR + LI+I LP  + RL I            K 
Sbjct:   621 IQVKSQIFLIGCTNSIQSIDSALLRPGRFESLIHIDLPSLDDRLDILNVLSTNSLNFNKD 680

Query:   482 PVSKDVDLRALAKYTQGFSGADITEICQRA 511
              +++ V L  +A  T GF+G+ + ++C +A
Sbjct:   681 EITQQVWLD-IATQTSGFTGSQLYDLCNQA 709


>UNIPROTKB|F1NU79 [details] [associations]
            symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0022624 "proteasome accessory complex"
            evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
            [GO:0031531 "thyrotropin-releasing hormone receptor binding"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
            GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
            GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
            Ensembl:ENSGALT00000000469 Uniprot:F1NU79
        Length = 412

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    70 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 128

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   129 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 188

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   189 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 248

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   249 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 308

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   309 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 368

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   369 CTEAGMYALRE 379


>UNIPROTKB|P62194 [details] [associations]
            symbol:PSMC5 "26S protease regulatory subunit 8"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0000502 "proteasome complex"
            evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
            hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
            GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
            EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
            UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
            PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
            KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
            InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
            ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>UNIPROTKB|P62195 [details] [associations]
            symbol:PSMC5 "26S protease regulatory subunit 8"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
            "nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IDA] [GO:0000502 "proteasome complex"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
            [GO:0031531 "thyrotropin-releasing hormone receptor binding"
            evidence=IPI] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043069 "negative regulation of programmed cell
            death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
            evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
            [GO:0003712 "transcription cofactor activity" evidence=TAS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
            [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
            [GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
            [GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
            "M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
            "mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
            and presentation of peptide antigen via MHC class I" evidence=TAS]
            [GO:0002479 "antigen processing and presentation of exogenous
            peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006521 "regulation of cellular amino acid
            metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
            evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
            by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
            reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
            [GO:0031145 "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
            Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
            Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
            GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
            GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
            GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
            GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
            EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
            GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
            Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
            OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
            EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
            IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
            RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
            PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
            MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
            PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
            Ensembl:ENST00000375812 Ensembl:ENST00000580864
            Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
            GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
            neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
            PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
            NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
            Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>UNIPROTKB|P62197 [details] [associations]
            symbol:PSMC5 "26S protease regulatory subunit 8"
            species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
            receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
            GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
            GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
            EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
            ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
            Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
            Uniprot:P62197
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>UNIPROTKB|Q6AZU7 [details] [associations]
            symbol:Q6AZU7 "Putative uncharacterized protein"
            species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
            binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
            receptor binding" evidence=ISS] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
            GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
            ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
        Length = 414

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    72 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 130

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   131 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 190

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   191 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 250

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   251 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 310

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   311 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 370

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   371 CTEAGMYALRE 381


>TIGR_CMR|CBU_1352 [details] [associations]
            symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
            species:227377 "Coxiella burnetii RSA 493" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
            TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
            MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
            ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
            KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
            BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
        Length = 647

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 105/264 (39%), Positives = 159/264 (60%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             + G S    L +  V+V    ++D+ G++  K E++E V++ +  P KF++ G     GV
Sbjct:   137 SFGRSKARLLSQDQVKV---TFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGV 192

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLAKA+A E +  F ++ G + + M+ G   + VR++FD+A++ APC++
Sbjct:   193 LLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCII 252

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++                  LNQLL EMDG   K+ + ++ ATNRPD++DPALL
Sbjct:   253 FIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALL 312

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + +PLPD + R  I K  + K P++KDV    +A+ T GFSGAD+  I   A
Sbjct:   313 RPGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEA 372

Query:   512 CKYAIRENIEKDI---ERERRRSE 532
               +A REN +KD+   E ER + +
Sbjct:   373 ALFAAREN-KKDVSMSEFERAKDK 395


>MGI|MGI:105047 [details] [associations]
            symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
            ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=ISO;ISA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
            evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
            binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
            evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISO] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
            GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
            GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
            OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
            EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
            RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
            SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
            REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
            PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
            KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
            Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>RGD|708376 [details] [associations]
            symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
            "proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
            binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=ISO;ISS]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
            protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
            complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
            evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
            receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
            complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
            protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
            GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
            GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
            OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
            GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
            IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
            ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
            PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
            Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
            UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
            ArrayExpress:P62198 Genevestigator:P62198
            GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
            symbol:psmc5 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
            "thyrotropin-releasing hormone receptor binding" evidence=ISS]
            [GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
            "transcription factor binding" evidence=ISS] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
            GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
            GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
            EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
            UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
            GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
            Uniprot:Q6AZC1
        Length = 406

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 117/311 (37%), Positives = 180/311 (57%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 122

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI +                + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   363 CTEAGMYALRE 373


>ASPGD|ASPL0000002697 [details] [associations]
            symbol:pexA species:162425 "Emericella nidulans"
            [GO:0006631 "fatty acid metabolic process" evidence=IMP]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
            [GO:0006625 "protein targeting to peroxisome" evidence=IEA]
            [GO:0042623 "ATPase activity, coupled" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
            PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
            EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
            GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
            EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
        Length = 1225

 Score = 520 (188.1 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
 Identities = 117/305 (38%), Positives = 172/305 (56%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 275
             +A  T G++  DL  L   A  + +   +   +  DE+  A IL +    D  F  A+  
Sbjct:   780 LAGKTDGFMPGDLVLLVARARNEALIRSIS--EASDES-RAIILGA---AD--FDNAIKG 831

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
               P++LR   +      +  IGGL   ++ L ET+QYP ++   F +  +    G+L YG
Sbjct:   832 FTPASLRNVTLTSSTTTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYG 891

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
              PGCGKT+LA A+A EC  NFISVKGPE+L  + G SE +VR++F++A+ + PC+LFFDE
Sbjct:   892 YPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFDE 951

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
              DSIA +               +NQLLT+MDG      V+++ AT+RPD+IDPALLRPGR
Sbjct:   952 FDSIAPKRGHDSTGVTDRV---VNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGR 1008

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRA--LAKYTQGFSGADITEICQRACK 513
             LD+ +   +P+   R  I +A  +K  +S +V  R   +A  T GFSGAD+  +   A  
Sbjct:  1009 LDKSLLCDMPNHADRADIIRAVSKKLAMSNEVVARIDEVAARTAGFSGADLQAVVYNAHL 1068

Query:   514 YAIRE 518
              A+ +
Sbjct:  1069 EAVHD 1073

 Score = 46 (21.3 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query:   552 HFEESMKYARRSVSDADIRKYQAFAQTLQQSR 583
             H E S+   R S+S+A+ R+  A  +   + R
Sbjct:  1174 HMERSLNTTRSSLSEAERRRLLAIYREFVEGR 1205


>UNIPROTKB|F1MG70 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
            IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
            Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
        Length = 417

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   117 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 176

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   177 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 236

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   237 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 296

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   297 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 356

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   357 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 400


>UNIPROTKB|Q3T030 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
            RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
            SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
            CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
            ArrayExpress:Q3T030 Uniprot:Q3T030
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>UNIPROTKB|E2RH48 [details] [associations]
            symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0022624 "proteasome accessory complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
            OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
            RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
            PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
            KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>UNIPROTKB|P43686 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0000502 "proteasome complex"
            evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
            "ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
            [GO:0006521 "regulation of cellular amino acid metabolic process"
            evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
            [GO:0006977 "DNA damage response, signal transduction by p53 class
            mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
            [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
            [GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
            [GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
            "M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
            "mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
            and presentation of peptide antigen via MHC class I" evidence=TAS]
            [GO:0002479 "antigen processing and presentation of exogenous
            peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0006200 "ATP catabolic process" evidence=TAS]
            Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
            Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
            GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
            GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
            GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
            GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
            GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
            EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
            OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
            EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
            IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
            RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
            ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
            MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
            OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
            Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
            KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
            HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
            neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
            PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
            GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
            CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
            Uniprot:P43686
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>UNIPROTKB|Q4R7L3 [details] [associations]
            symbol:PSMC4 "26S protease regulatory subunit 6B"
            species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
            accessory complex" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
            ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>MGI|MGI:1346093 [details] [associations]
            symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
            OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
            EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
            EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
            UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
            SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
            REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
            Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
            InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
            Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
            Uniprot:P54775
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>RGD|621102 [details] [associations]
            symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
            "blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
            [GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
            accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
            process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
            GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
            OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
            EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
            UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
            SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
            PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
            KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
            EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
            GermOnline:ENSRNOG00000018994 Uniprot:Q63570
        Length = 418

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/284 (40%), Positives = 162/284 (57%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ +   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401


>UNIPROTKB|F1PBK7 [details] [associations]
            symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
            TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
            Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
        Length = 439

 Score = 496 (179.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409

 Score = 47 (21.6 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    20 VWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    80 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 132

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   133 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 178

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   179 ERPTEQ--YSDIGGLDK 193


>UNIPROTKB|P17980 [details] [associations]
            symbol:PSMC3 "26S protease regulatory subunit 6A"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
            "blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
            processing body" evidence=ISS] [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=TAS] [GO:0003714 "transcription corepressor
            activity" evidence=TAS] [GO:0000502 "proteasome complex"
            evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
            [GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
            [GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
            [GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
            "M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
            "mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
            and presentation of peptide antigen via MHC class I" evidence=TAS]
            [GO:0002479 "antigen processing and presentation of exogenous
            peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006521 "regulation of cellular amino acid
            metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
            evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
            by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
            reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
            evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
            [GO:0031145 "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
            Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
            GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
            GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
            EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
            GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
            GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
            GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
            GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
            EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
            EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
            IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
            ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
            MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
            REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
            PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
            KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
            HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
            PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
            PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
            PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
            Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
        Length = 439

 Score = 496 (179.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409

 Score = 47 (21.6 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    20 VWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    80 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 132

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   133 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 178

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   179 ERPTEQ--YSDIGGLDK 193


>UNIPROTKB|P46470 [details] [associations]
            symbol:psmc5 "26S protease regulatory subunit 8"
            species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
            UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
            KEGG:xla:397968 Uniprot:P46470
        Length = 461

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 118/311 (37%), Positives = 181/311 (58%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF- 269
             ++ ++   YVG  + A+  +  L  +  E   V+D+ D+ ID   +     +A+ ++ + 
Sbjct:    59 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYT 117

Query:   270 --KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
               K      +P      V +VP+  +E IGGL+   +E++E ++ PV+HPE FE  G++ 
Sbjct:   118 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQ 177

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   178 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 237

Query:   388 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
             P ++F DE+DSI ++               L +LL ++DG  A K + +I ATNR DI+D
Sbjct:   238 PSIIFMDEIDSIGSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILD 296

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
              ALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +
Sbjct:   297 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 356

Query:   508 CQRACKYAIRE 518
             C  A  YA+RE
Sbjct:   357 CTEAGMYALRE 367


>UNIPROTKB|F1SID4 [details] [associations]
            symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
            TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
            Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
        Length = 446

 Score = 496 (179.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   184 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 243

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   244 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 303

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   304 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 363

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   364 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 416

 Score = 46 (21.3 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    27 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 86

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    87 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 139

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   140 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 185

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   186 ERPTEQ--YSDIGGLDK 200


>MGI|MGI:1098754 [details] [associations]
            symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
            ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
            GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
            CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
            EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
            UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
            IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
            PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
            NextBio:295874 Bgee:O88685 Genevestigator:O88685
            GermOnline:ENSMUSG00000002102 Uniprot:O88685
        Length = 442

 Score = 496 (179.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 299

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   300 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 359

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412

 Score = 46 (21.3 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    23 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 82

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    83 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 135

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   136 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 181

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   182 ERPTEQ--YSDIGGLDK 196


>RGD|61905 [details] [associations]
            symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
           3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
           processing body" evidence=ISS] [GO:0001824 "blastocyst development"
           evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
           [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
           evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
           [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
           [GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
           [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
           "perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
           InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
           Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
           GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
           GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
           KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
           IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
           ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
           PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
           UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
           Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
        Length = 439

 Score = 496 (179.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409

 Score = 46 (21.3 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    20 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    80 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 132

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   133 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 178

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   179 ERPTEQ--YSDIGGLDK 193


>UNIPROTKB|Q6P6U2 [details] [associations]
            symbol:Psmc3 "26S protease regulatory subunit 6A"
            species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
            GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
            IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
            IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
            Genevestigator:Q6P6U2 Uniprot:Q6P6U2
        Length = 442

 Score = 496 (179.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 299

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   300 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 359

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412

 Score = 46 (21.3 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
 Identities = 48/197 (24%), Positives = 79/197 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    23 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 82

Query:    87 IRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 143
             I++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  + Y
Sbjct:    83 IKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTRQTY 135

Query:   144 FTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRED 198
             F           ++ GDL     G+    + ++ET P EY     D+ +          D
Sbjct:   136 FLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVD 181

Query:   199 ENRLDEVGYDDVGGVRK 215
             E   ++  Y D+GG+ K
Sbjct:   182 ERPTEQ--YSDIGGLDK 196


>UNIPROTKB|J9NWA6 [details] [associations]
            symbol:LOC100687152 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
            EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
            Uniprot:J9NWA6
        Length = 434

 Score = 489 (177.2 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
 Identities = 100/233 (42%), Positives = 138/233 (59%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   172 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 231

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+  T+  
Sbjct:   232 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRF 291

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLDQ I  P+
Sbjct:   292 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPM 351

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+    F+GA    +C  A   A+R
Sbjct:   352 PNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALR 404

 Score = 52 (23.4 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
 Identities = 44/194 (22%), Positives = 78/194 (40%)

Query:    32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
             V DEA  D     VL   T E +Q  R    +  ++K +  + T  +    D  +E   K
Sbjct:    15 VWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 74

Query:    87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
             I++NK +   L   + +++ VH     + G  + +   D   +G    +  +  + YF  
Sbjct:    75 IKVNKTL-PYLVSNVIELLDVHPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 130

Query:   147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
                      ++ GDL     G+    + ++ET P EY     D+ +          DE  
Sbjct:   131 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 176

Query:   202 LDEVGYDDVGGVRK 215
              ++  Y D+GG+ K
Sbjct:   177 TEQ--YSDIGGLDK 188


>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
            symbol:PFD0665c "26s proteasome aaa-ATPase
            subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
            [GO:0005838 "proteasome regulatory particle" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
            EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
            OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
            RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
            MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
            GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
            Uniprot:Q8I1V1
        Length = 392

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 104/235 (44%), Positives = 143/235 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             + E PNV + D+GGL+  K+E++E V+ P+  PE +EK G+ P  G+L YGPPG GKT+L
Sbjct:   129 ITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTML 188

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
              KA+ANE Q  FI V G E +  + GE    VR++F  AR+++P ++F DE+D+IAT+  
Sbjct:   189 VKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRF 248

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          L +LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  PL
Sbjct:   249 DAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 308

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
             PD + +  IF+  + K  VS DV++ +    T   S ADI  I Q A   AIR+N
Sbjct:   309 PDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363


>UNIPROTKB|Q4RG45 [details] [associations]
            symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
            genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
            [GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0008134 "transcription factor binding" evidence=ISS]
            [GO:0031531 "thyrotropin-releasing hormone receptor binding"
            evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
            GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
            ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
        Length = 406

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 112/273 (41%), Positives = 163/273 (59%)

Query:   247 IDLEDETIDAEI-LNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRE 305
             ID+ D T +  + L + + T  H K      +P      V +VP+  +E IGGL+   +E
Sbjct:   103 IDINDVTPNCRVALRNDSYT-LH-KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 160

Query:   306 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 365
             ++E ++ PV+HPE FE  G++  KGVL YGPPG GKTLLA+A+A+     FI V G EL+
Sbjct:   161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220

Query:   366 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 425
               + GE    VRE+F  AR+ AP ++F DE+DSI +                + +LL ++
Sbjct:   221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280

Query:   426 DGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSK 485
             DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P P+EE+RL I K   RK  +++
Sbjct:   281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 340

Query:   486 DVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
              ++LR +A+   G SGA++  +C  A  YA+RE
Sbjct:   341 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373


>UNIPROTKB|Q8I1V1 [details] [associations]
            symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
            "proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
            catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
            GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
            GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
            IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
            EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
            EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
        Length = 392

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 104/235 (44%), Positives = 143/235 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             + E PNV + D+GGL+  K+E++E V+ P+  PE +EK G+ P  G+L YGPPG GKT+L
Sbjct:   129 ITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTML 188

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
              KA+ANE Q  FI V G E +  + GE    VR++F  AR+++P ++F DE+D+IAT+  
Sbjct:   189 VKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRF 248

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          L +LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  PL
Sbjct:   249 DAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 308

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
             PD + +  IF+  + K  VS DV++ +    T   S ADI  I Q A   AIR+N
Sbjct:   309 PDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363


>TAIR|locus:2024822 [details] [associations]
            symbol:RPT1A "regulatory particle triple-A 1A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
            GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
            EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
            PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
            ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
            PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
            KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
            KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
            Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
        Length = 426

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 106/251 (42%), Positives = 147/251 (58%)

Query:   277 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 336
             +PS    TV E P+V + D+GG +    +++E V+ P+ HPEKF K G+ P KGVL YGP
Sbjct:   151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210

Query:   337 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 396
             PG GKTLLA+A+AN   A FI V G EL+  + GE    VRE+F  AR    C++FFDE+
Sbjct:   211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270

Query:   397 DSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRL 456
             D+I                  + +++ ++DG  A+  + ++ ATNRPD +DPALLRPGRL
Sbjct:   271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330

Query:   457 DQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
             D+ +   LPD ESR QIFK   R     +D+    LA+     +GADI  +C  A  YAI
Sbjct:   331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 390

Query:   517 RENIEKDIERE 527
             R   +   E++
Sbjct:   391 RARRKTVTEKD 401


>TAIR|locus:2161258 [details] [associations]
            symbol:RPT3 "regulatory particle triple-A ATPase 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
            [GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
            "ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
            "cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
            catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
            stimulus" evidence=RCA] [GO:0009853 "photorespiration"
            evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
            evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0043248 "proteasome assembly"
            evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
            GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
            IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
            ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
            PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
            KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
            KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
            GermOnline:AT5G58290 Uniprot:Q9SEI4
        Length = 408

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 136/395 (34%), Positives = 207/395 (52%)

Query:   140 LKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDE 199
             L P  + A   +   D   + G ++S+E ++  TD  E  V   D +   + E +R ++E
Sbjct:    11 LDPKASPALMDLSTADEEDLYGRLKSLERQLEFTDIQEEYV--KDEQKNLKRELLRAQEE 68

Query:   200 -NRLDEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEI 258
               R+  V    +G   ++    +G VG+   +      L  I  ++    L+     A  
Sbjct:    69 VKRIQSVPLV-IGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREL----LKPSASVALH 123

Query:   259 LNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPE 318
              +S A+ D     A   S+ S L ++  E P+V++ DIGG +  K+E++E V+ P+ H E
Sbjct:   124 RHSNALVDVLPPEA--DSSISLLSQS--EKPDVSYNDIGGCDIQKQEIREAVELPLTHHE 179

Query:   319 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 378
              +++ G+ P +GVL YGPPG GKT+LAKA+AN   A FI V G E +  + GE    VR+
Sbjct:   180 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRD 239

Query:   379 IFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIG 438
             +F  A+++AP ++F DE+D+IAT                L +LL +MDG      V +I 
Sbjct:   240 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 299

Query:   439 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQG 498
             ATNR D +DPALLRPGRLD+ I  PLPD   +  +F+ C  K  +S +VDL         
Sbjct:   300 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDK 359

Query:   499 FSGADITEICQRACKYAIREN----IEKDIERERR 529
              S A+I  ICQ A  +A+R+N    + KD E+  R
Sbjct:   360 ISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 394


>WB|WBGene00004503 [details] [associations]
            symbol:rpt-3 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
            larval development" evidence=IMP] [GO:0008340 "determination of
            adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
            GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
            EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
            ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
            MINT:MINT-212949 STRING:P46502 PaxDb:P46502
            EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
            KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
            GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
            Uniprot:P46502
        Length = 414

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 104/244 (42%), Positives = 148/244 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E P++++ DIGGL+  K+E++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAK
Sbjct:   154 EKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAK 213

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+A    A+FI V G E +  + GE    VR++F  A++++P ++F DE+D+IAT+    
Sbjct:   214 AVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDA 273

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        L +LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  PLPD
Sbjct:   274 QTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 333

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEK 522
                +  +F     +  +S DVDL          SGADI  ICQ A   A+REN    + K
Sbjct:   334 RRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTK 393

Query:   523 DIER 526
             D+E+
Sbjct:   394 DLEK 397


>WB|WBGene00004506 [details] [associations]
            symbol:rpt-6 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
            GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
            GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
            PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
            DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
            PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
            GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
            WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
            Uniprot:Q9XTT9
        Length = 416

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 113/303 (37%), Positives = 176/303 (58%)

Query:   223 YVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGT 275
             YVG    A+  +  L  +  E   V+D+ D++ID   LN+   +A+  + +   K     
Sbjct:    82 YVGEVSKAMDKKKVLVKVHPEGKYVVDV-DKSIDINSLNTGARVALRADSYALHKLLPNK 140

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
              +P      V +VP+  +E +GGL+   +E++E ++ PV+HPE F+  G++  KGVL +G
Sbjct:   141 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFG 200

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
             PPG GKTLLA+A+A+  +  FI V G EL+  + GE    VRE+F  AR+ AP ++F DE
Sbjct:   201 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 260

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
             +DSI +                + +LL ++DG  A K + +I ATNR DI+DPALLRPGR
Sbjct:   261 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 320

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             +D+ I  P PDE++R  I K   RK  + + +++  +A+   G SGA++  +C  A  +A
Sbjct:   321 IDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFA 380

Query:   516 IRE 518
             +RE
Sbjct:   381 LRE 383


>UNIPROTKB|F1NDQ1 [details] [associations]
            symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
            EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
            Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
        Length = 385

 Score = 496 (179.7 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   123 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 182

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   183 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 242

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   243 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 302

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   303 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 355

 Score = 42 (19.8 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
 Identities = 36/145 (24%), Positives = 61/145 (42%)

Query:    76 ALADDTCEEP-KIRMNKVVRSNLRVRLGDVVSVHQ-CADVKYGKRVHI-LPVDDTIEGVT 132
             A+ D   E   KI++NK +   L   + +  SVH  C +   G+ +   L + D     T
Sbjct:    16 AMKDKIKENSEKIKVNKTL-PYLVSNVIEERSVHHFCQE---GEGIGSPLVIGDMARCQT 71

Query:   133 GNLFDAYLKPYF--TEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCE 190
                 + Y  P     +A + ++ GDL     G+    + ++ET P EY     D+ +   
Sbjct:    72 VYDSETYFLPVIGLVDAEK-LKPGDLV----GVNKDSYLILETLPTEY-----DSRV--- 118

Query:   191 GEPVRREDENRLDEVGYDDVGGVRK 215
                    DE   ++  Y D+GG+ K
Sbjct:   119 --KAMEVDERPTEQ--YSDIGGLDK 139


>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
            symbol:psmc4 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
            Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
            GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
            UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
            PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
            Uniprot:Q7SXX0
        Length = 418

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 113/284 (39%), Positives = 161/284 (56%)

Query:   253 TIDAEIL--NSMAVTDEHFKTALGTSNPSA----LRETVVEVPNVNWEDIGGLENVKREL 306
             TID E+L  N+     +H    +    P A    +  T  + P+V + DIGG++  K+E+
Sbjct:   118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEV 177

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+   A FI V G E + 
Sbjct:   178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  A+++AP ++F DE+D+IAT+               L +LL +MD
Sbjct:   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALL PGRLD+ I  PLPD   +  +F     K  +S++
Sbjct:   298 GFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEE 357

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             VDL          SGADI  ICQ A   A+REN    + KD E+
Sbjct:   358 VDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEK 401


>FB|FBgn0036224 [details] [associations]
            symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
            species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
            regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
            GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
            KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
            UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
            STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
            KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
            InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
            NextBio:813228 Uniprot:Q9VTQ9
        Length = 398

 Score = 500 (181.1 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 105/253 (41%), Positives = 154/253 (60%)

Query:   277 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 336
             +P     T  +  NVN+ +IGGL    REL+E ++ P+ +P+ F + G+SP KG L YGP
Sbjct:   125 DPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGP 184

Query:   337 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 396
             PG GKTLLA+AIA++  ANF+ V    ++  + GES   +RE+F  AR   PC++F DE+
Sbjct:   185 PGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEI 244

Query:   397 DSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRL 456
             D+I  +               L +LL +MDG  A   V +I ATNRPD +DPALLRPGRL
Sbjct:   245 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRL 304

Query:   457 DQLIYIPLPDEESRLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKY 514
             D+ + IPLP+E +R+ I K  +   P++K  ++D  A+ K +  F+GAD+  IC  A  +
Sbjct:   305 DRKLEIPLPNEVARMDILK--IHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLF 362

Query:   515 AIRENIEKDIERE 527
             A+R + E  I+ +
Sbjct:   363 ALRCDREFVIQED 375

 Score = 37 (18.1 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query:   234 EAALQCIREKMDVIDLEDETIDAEI 258
             E+ L+ +R+K  V++ E E  + ++
Sbjct:    32 ESKLKALRDKYKVVNAEYEKSEDDL 56


>UNIPROTKB|F1P3L9 [details] [associations]
            symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
            accessory complex" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
            GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
            EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
            Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
        Length = 389

 Score = 496 (179.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   127 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 186

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   187 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 246

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   247 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 306

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   307 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 359

 Score = 41 (19.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             ++ GDL     G+    + ++ET P EY     D+ +          DE   ++  Y D+
Sbjct:    95 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 138

Query:   211 GGVRK 215
             GG+ K
Sbjct:   139 GGLDK 143


>UNIPROTKB|E9PM69 [details] [associations]
            symbol:PSMC3 "26S protease regulatory subunit 6A"
            species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
            ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
            PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
            Bgee:E9PM69 Uniprot:E9PM69
        Length = 397

 Score = 496 (179.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 101/233 (43%), Positives = 140/233 (60%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   135 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 194

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   195 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 254

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   255 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 314

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   315 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 367

 Score = 41 (19.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             ++ GDL     G+    + ++ET P EY     D+ +          DE   ++  Y D+
Sbjct:   103 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 146

Query:   211 GGVRK 215
             GG+ K
Sbjct:   147 GGLDK 151


>DICTYBASE|DDB_G0284415 [details] [associations]
            symbol:psmC3 "26S proteasome ATPase 3 subunit"
            species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
            vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
            HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
            TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
            RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
            PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
            KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
            ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
        Length = 421

 Score = 487 (176.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 97/231 (41%), Positives = 140/231 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E P   + DIGGL+   +EL E V  P+ H E+FE  G+ P KGVL YGPPG GKTLLA+
Sbjct:   161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A A +  + ++ + GP+L+ M+ G+    VR+ F  A++  P ++F DELD+I T+    
Sbjct:   221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        + +LL ++DG S+   + +I ATNR DI+DPALLR GRLD+ I  PLP+
Sbjct:   281 EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPN 340

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             EE+R  I +   RK  VS DV+   LA+ ++ F+GA +  +C  A   A+R
Sbjct:   341 EEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391

 Score = 50 (22.7 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 19/65 (29%), Positives = 30/65 (46%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             +R GDL     G+    + +++T PPEY     D+ +          DE   +E  Y D+
Sbjct:   127 LRPGDLV----GINKDSYIILDTLPPEY-----DSRV-----KAMEIDEKPTEE--YSDI 170

Query:   211 GGVRK 215
             GG+ K
Sbjct:   171 GGLDK 175


>TAIR|locus:2036099 [details] [associations]
            symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
            binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
            pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
            development" evidence=IGI] [GO:0009555 "pollen development"
            evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
            evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
            beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
            organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
            evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
            GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
            GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
            KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
            EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
            IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
            UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
            STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
            GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
            InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
            Genevestigator:O04019 Uniprot:O04019
        Length = 423

 Score = 495 (179.3 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
 Identities = 98/235 (41%), Positives = 144/235 (61%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P  ++ DIGGLE   +EL E +  P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct:   161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 220

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A +  A F+ + GP+L+ M+ G+    VR+ F  A++ +PC++F DE+D+I T+  
Sbjct:   221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRF 280

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG S+   + +I ATNR DI+DPAL+R GRLD+ I  P 
Sbjct:   281 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
             P EE+R +I +   RK  V+ DV+   LA+ T  F+GA +  +C  A   A+R +
Sbjct:   341 PTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395

 Score = 41 (19.5 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             ++ GDL     G+    + +++T P EY     D+ +          DE   ++  Y+D+
Sbjct:   129 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 172

Query:   211 GGVRK 215
             GG+ K
Sbjct:   173 GGLEK 177


>TAIR|locus:2028200 [details] [associations]
            symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
            "proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
            "cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
            vesicle transport" evidence=RCA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
            GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
            ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
            RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
            SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
            EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
            GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
            Uniprot:Q9MAK9
        Length = 399

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 103/236 (43%), Positives = 153/236 (64%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N+++  +GGL +  REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct:   135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             +   ANF+ V    ++  + GES   +RE+F+ AR+  PC++F DE+D+I  +       
Sbjct:   195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL ++DG      V +I ATNRPD++DPALLRPGRLD+ I IPLP+E+S
Sbjct:   255 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             R++I K  +  S ++K  ++D  A+ K  +GF+GAD+  IC  A  +AIR   E+D
Sbjct:   315 RMEILK--IHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRA--ERD 366


>ZFIN|ZDB-GENE-030131-304 [details] [associations]
            symbol:psmc6 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
            GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
            GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
            EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
            EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
            UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
            GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
            Uniprot:Q6DRD2
        Length = 389

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 100/234 (42%), Positives = 148/234 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 521
             RL I K  +   P++K  D+D  A+ K + GF+GAD+  +C  A  +AIR + E
Sbjct:   309 RLDILK--IHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE 360


>ZFIN|ZDB-GENE-030131-666 [details] [associations]
            symbol:psmc3 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
            GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
            TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
            Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
            Uniprot:F1QJQ2
        Length = 427

 Score = 492 (178.3 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
 Identities = 100/233 (42%), Positives = 139/233 (59%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   165 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 224

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I T+  
Sbjct:   225 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 284

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   285 DSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 344

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  V  DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   345 PNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 397

 Score = 43 (20.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
 Identities = 48/200 (24%), Positives = 81/200 (40%)

Query:    29 NRLVVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE- 84
             +R V DE + D     VL   T E +Q  R    +  ++K +  + T  +    D  +E 
Sbjct:     6 DRSVWDE-VEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKEN 64

Query:    85 -PKIRMNKVVR---SNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYL 140
               KI++NK +    SN+ + L DV    Q  D   G  + +   D   +G    +  +  
Sbjct:    65 TEKIKVNKTLPYLVSNV-IELLDVDPNDQEED---GANIDL---DSQRKGKCAVIKTSTR 117

Query:   141 KPYFTEAY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVR 195
             + YF           ++ GDL     G+    + ++ET P EY     D+ +        
Sbjct:   118 QTYFLPVIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAM 163

Query:   196 REDENRLDEVGYDDVGGVRK 215
               DE   ++  Y D+GG+ K
Sbjct:   164 EVDERPTEQ--YSDIGGLDK 181


>FB|FBgn0037742 [details] [associations]
            symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
            species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
            PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
            GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
            GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
            RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
            EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
            KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
            OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
            Uniprot:Q9VH79
        Length = 405

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 99/233 (42%), Positives = 145/233 (62%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E P++++ DIGGL+  K+E++E V+ P+ H + +++ G+ P +GVL +GPPGCGKT+LAK
Sbjct:   145 EKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAK 204

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+A+   A+FI V G E +  + GE    VR++F  A+Q++P ++F DE+D+IAT+    
Sbjct:   205 AVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDA 264

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        L +LL +MDG      + +I ATNR D +DPALLRPGRLD+ I +PLPD
Sbjct:   265 QTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPD 324

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
                +  +F     K  V +DVDL  +       S ADI  ICQ A  +A+REN
Sbjct:   325 RRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVREN 377


>UNIPROTKB|P37476 [details] [associations]
            symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IDA] [GO:0030428 "cell septum"
            evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
            GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
            eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
            GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
            RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
            IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
            GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
            OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
            Uniprot:P37476
        Length = 637

 Score = 492 (178.3 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
 Identities = 99/236 (41%), Positives = 141/236 (59%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E   V ++D+ G +  K+EL E V++ ++ P KF + G    KGVL  GPPG GKTLLAK
Sbjct:   154 EKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A A E    F S+ G + + M+ G   + VR++F+ A+++APC++F DE+D++  Q    
Sbjct:   213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAG 272

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        LNQLL EMDG SA + + II ATNR DI+DPALLRPGR D+ I +  PD
Sbjct:   273 LGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPD 332

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
                R  + K   R  P+ + V+L+++A  T GFSGAD+  +   A   A R+N +K
Sbjct:   333 VIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKK 388

 Score = 42 (19.8 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query:   183 PDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKIAKDTHGY 223
             P TE       ++  D+ ++D V    V GV ++      Y
Sbjct:    30 PKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLKNY 70


>FB|FBgn0039788 [details] [associations]
            symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
            species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
            GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
            eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
            GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
            UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
            STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
            KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
            InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
            NextBio:834976 Uniprot:Q9VA54
        Length = 399

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 111/279 (39%), Positives = 168/279 (60%)

Query:   246 VIDLEDETI---DAEILNSMAVTDEHF---KTALGTSNPSALRETVVEVPNVNWEDIGGL 299
             V+D+ D+TI   D    + +A+ +E +   K      +P      V +VP+  +E +GGL
Sbjct:    90 VVDV-DKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGL 148

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
             +   +E++E ++ PV+HPE F+  G++  KGVL YGPPG GKTLLA+A+A+  +  FI V
Sbjct:   149 DKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRV 208

Query:   360 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 419
              G EL+  + GE    VRE+F  AR+ AP ++F DE+DSI +                L 
Sbjct:   209 SGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTML- 267

Query:   420 QLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLR 479
             +LL ++DG  A K + +I ATNR D++D ALLRPGR+D+ I  P P+EE+RL I K   R
Sbjct:   268 ELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSR 327

Query:   480 KSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
             K  +++ ++LR +A+   G SGA++  +C  A  YA+RE
Sbjct:   328 KMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRE 366


>UNIPROTKB|F1MLV1 [details] [associations]
            symbol:PSMC6 "26S protease regulatory subunit 10B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
            UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
            EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
            Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
        Length = 389

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356


>UNIPROTKB|J9P1N0 [details] [associations]
            symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
            OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
            Uniprot:J9P1N0
        Length = 395

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 254

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   255 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   315 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 362


>UNIPROTKB|P62333 [details] [associations]
            symbol:PSMC6 "26S protease regulatory subunit 10B"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
            activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IC]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            [GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
            transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
            phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
            polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
            mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
            evidence=TAS] [GO:0002474 "antigen processing and presentation of
            peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
            processing and presentation of exogenous peptide antigen via MHC
            class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
            "regulation of cellular amino acid metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
            Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
            GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
            GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
            GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
            EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
            GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
            Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
            OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
            EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
            PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
            ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
            MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
            REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
            PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
            KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
            H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
            neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
            PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
            CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
            Uniprot:P62333
        Length = 389

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356


>UNIPROTKB|F1SFE6 [details] [associations]
            symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
            TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
            OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
            Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
            ArrayExpress:F1SFE6 Uniprot:F1SFE6
        Length = 403

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370


>UNIPROTKB|P62335 [details] [associations]
            symbol:PSMC6 "26S protease regulatory subunit 10B"
            species:43179 "Spermophilus tridecemlineatus" [GO:0022624
            "proteasome accessory complex" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
            OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
            SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
        Length = 389

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356


>TIGR_CMR|GSU_1809 [details] [associations]
            symbol:GSU_1809 "cell division protein FtsH"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
            TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
            RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
            ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
            Uniprot:Q74C66
        Length = 610

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 101/248 (40%), Positives = 149/248 (60%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             A G S    L E       V +ED+ G++  K EL+E +Q+ ++ P+KF K G    KGV
Sbjct:   134 AFGKSRAKLLTEAQ---GRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGV 189

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLA+A+A E    F S+ G + + M+ G   + VR++F + +++APC++
Sbjct:   190 LLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCII 249

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++                  LNQLL EMDG  + + V +I ATNRPD++DPALL
Sbjct:   250 FIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALL 309

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + +P PD + R  I K   +K+P++ DVDL  +A+ T GFSGAD++ +   A
Sbjct:   310 RPGRFDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEA 369

Query:   512 CKYAIREN 519
                A R++
Sbjct:   370 ALLAARKD 377


>MGI|MGI:1914339 [details] [associations]
            symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
            OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
            EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
            IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
            ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
            PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
            REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
            Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
            InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
            GermOnline:ENSMUSG00000021832 Uniprot:P62334
        Length = 389

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356


>RGD|1308825 [details] [associations]
            symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
            "proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
            "plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
            complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
            OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
            GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
            IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
            STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
            InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
            Uniprot:Q32PW9
        Length = 381

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   241 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   301 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 348


>RGD|2318218 [details] [associations]
            symbol:LOC100365869 "proteasome (prosome, macropain) 26S
            subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
            GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
            EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
            GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
            UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
            KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
        Length = 403

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370


>UNIPROTKB|Q2KIW6 [details] [associations]
            symbol:PSMC6 "26S protease regulatory subunit 10B"
            species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
            IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
            ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
            KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
            OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
        Length = 389

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 99/230 (43%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIR 356


>CGD|CAL0006022 [details] [associations]
            symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
            "nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
            storage granule" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
            assembly" evidence=IEA] [GO:0032968 "positive regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0051091 "positive regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006289
            "nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
            GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
            EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
            RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
            GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
        Length = 401

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 114/310 (36%), Positives = 173/310 (55%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILN-SMAVT---DEH-- 268
             K+ ++   YVG  +  +  +  L  I  +   I    + ID + L  S+ V    D H  
Sbjct:    59 KLLQEPGSYVGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDL 118

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
             +K      +P      V +VP+  ++ +GGL+   +E++E ++ PV+HPE FE  G++  
Sbjct:   119 YKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQP 178

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
             KGV+ YGPPG GKTLLA+A+A+  +  FI V G EL+  + GE    VRE+F  AR+ AP
Sbjct:   179 KGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 238

Query:   389 CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 448
              ++F DE+DSI +                + +LL ++DG  + K + II ATNR DI+DP
Sbjct:   239 SIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDP 298

Query:   449 ALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 508
             ALLRPGR+D+ I  P P   +R  I K   R   +++ ++LR +A+   G SGAD+  +C
Sbjct:   299 ALLRPGRIDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVC 358

Query:   509 QRACKYAIRE 518
               A  YA+RE
Sbjct:   359 TEAGMYALRE 368


>UNIPROTKB|P0AAI3 [details] [associations]
            symbol:ftsH species:83333 "Escherichia coli K-12"
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
            "proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
            evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
            [GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
            "integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
            activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
            GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
            eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
            HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
            RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
            ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
            MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
            EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
            EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
            KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
            EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
            BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
            BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
            EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
        Length = 644

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 100/263 (38%), Positives = 154/263 (58%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             + G S    L E  ++     + D+ G +  K E+ E V+Y +  P +F+K G    KGV
Sbjct:   133 SFGKSKARMLTEDQIKT---TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGV 188

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLAKAIA E +  F ++ G + + M+ G   + VR++F++A+++APC++
Sbjct:   189 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCII 248

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++  Q               LNQ+L EMDG    + + +I ATNRPD++DPALL
Sbjct:   249 FIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALL 308

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + + LPD   R QI K  +R+ P++ D+D   +A+ T GFSGAD+  +   A
Sbjct:   309 RPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEA 368

Query:   512 CKYAIREN--IEKDIERERRRSE 532
               +A R N  +   +E E+ + +
Sbjct:   369 ALFAARGNKRVVSMVEFEKAKDK 391


>TAIR|locus:2159996 [details] [associations]
            symbol:RPT4A "regulatory particle triple-A ATPase 4A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0043248 "proteasome assembly"
            evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
            GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
            EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
            IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
            ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
            PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
            KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
            OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
        Length = 399

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 102/236 (43%), Positives = 152/236 (64%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N+++  +GGL +  REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct:   135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             +   ANF+ V    ++  + GES   +RE+F+ AR+  PC++F DE+D+I  +       
Sbjct:   195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL ++DG      V +I ATNRPD++DPALLRPGRLD+ I IPLP+E+S
Sbjct:   255 ADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             R+ I K  +  + ++K  ++D  A+ K  +GF+GAD+  IC  A  +AIR   E+D
Sbjct:   315 RMDILK--IHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRA--ERD 366


>UNIPROTKB|O42586 [details] [associations]
            symbol:psmc3-b "26S protease regulatory subunit 6A-B"
            species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
            complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
            Xenbase:XB-GENE-1009853 Uniprot:O42586
        Length = 404

 Score = 490 (177.5 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 100/233 (42%), Positives = 139/233 (59%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+   +EL E +  P+ H EKFE  G+ P KGVL YGPPG GKTLL
Sbjct:   142 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 201

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A + +A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD+I  +  
Sbjct:   202 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRF 261

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG      V +I ATNR DI+DPALLR GRLD+ I  P+
Sbjct:   262 DSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 321

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             P+EE+R +I +   RK  VS DV+   LA+ T  F+GA    +C  A   A+R
Sbjct:   322 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALR 374

 Score = 41 (19.5 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query:   151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
             ++ GDL     G+    + ++ET P EY     D+ +          DE   ++  Y D+
Sbjct:   110 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 153

Query:   211 GGVRK 215
             GG+ K
Sbjct:   154 GGLDK 158


>ZFIN|ZDB-GENE-070530-1 [details] [associations]
            symbol:pex1 "peroxisome biogenesis factor 1"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
            "peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
            evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
            [GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
            "protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
            InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
            Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
            GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
            Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
            EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
            Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
            GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
        Length = 1237

 Score = 523 (189.2 bits), Expect = 4.4e-49, P = 4.4e-49
 Identities = 111/274 (40%), Positives = 164/274 (59%)

Query:   249 LEDETIDAEIL-NSMAVTDEHFKTALGTSNPSALRETVVEVPN-VNWEDIGGLENVKREL 306
             L +  I A  L NS  ++ + F+ AL    P +L +  ++ P+    E IGGL   ++ L
Sbjct:   749 LLERAIHANTLHNSEDLSCKDFRQALQGFTPPSLWDAQLQAPSGAGMERIGGLHEARQLL 808

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
              + +  P ++P  F    +    GVL YG PG GKTLLA A+A E   NFIS+KGPELL+
Sbjct:   809 MDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLS 868

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + G SE  VR++F +A+Q+ PC+LFFDE DS+A +               +NQLLT++D
Sbjct:   869 KYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRGHDNTGVTDRV---VNQLLTQLD 925

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G+     V+++ A++RPD+IDPALLRPGRLD+ +Y P PD  +RL+I +A     P++ D
Sbjct:   926 GVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVPLAAD 985

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIRENI 520
             VDL  +A  T+ F+GAD+  +   A   AI  ++
Sbjct:   986 VDLDQIAGATELFTGADLKALLYNAQLEAIHSSL 1019


>UNIPROTKB|F1NCS8 [details] [associations]
            symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
            complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
            GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
            IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
            Uniprot:F1NCS8
        Length = 403

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 98/230 (42%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 370


>UNIPROTKB|Q5ZKX2 [details] [associations]
            symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
            complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
            OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
            EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
            UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
            GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
            Uniprot:Q5ZKX2
        Length = 389

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 98/230 (42%), Positives = 146/230 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V++ +IGGL    REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct:   129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG      V +I ATNRPD +DPALLRPGRLD+ I+I LP+E++
Sbjct:   249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 517
             RL I K  +   P++K  ++D  A+ K + GF+GAD+  +C  A  +AIR
Sbjct:   309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356


>DICTYBASE|DDB_G0284517 [details] [associations]
            symbol:psmC6 "26S protease regulatory subunit S10B"
            species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
            GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
            EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
            EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
            OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
        Length = 393

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 109/253 (43%), Positives = 150/253 (59%)

Query:   277 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 336
             +P     T     +V++ +IGGL N  REL+E V+ P+  PE F + G+   KGVL YGP
Sbjct:   120 DPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGP 179

Query:   337 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 396
             PG GKTLLA+AIA+  +ANF+ V    ++  + GES   +RE+F  AR   PCV+F DE+
Sbjct:   180 PGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEI 239

Query:   397 DSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRL 456
             D+I  +               L +LL +MDG      V II ATNRPD++DPALLRPGRL
Sbjct:   240 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRL 299

Query:   457 DQLIYIPLPDEESRLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKY 514
             D+ I IPLP+E  R+ + K  +  + ++K  DVD  A+AK   GF+ AD+  +C  A  +
Sbjct:   300 DRKIEIPLPNEAGRVDVLK--IHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMF 357

Query:   515 AIRENIEKDIERE 527
             AIR   E+D   E
Sbjct:   358 AIRA--ERDYVME 368


>SGD|S000003016 [details] [associations]
            symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
            proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
            "proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
            "proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
            "positive regulation of transcription elongation from RNA
            polymerase II promoter" evidence=IMP] [GO:0045899 "positive
            regulation of RNA polymerase II transcriptional preinitiation
            complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0019904 "protein domain specific binding"
            evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
            repair" evidence=IGI] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
            GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
            GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
            GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
            GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
            HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
            OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
            EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
            RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
            DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
            PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
            KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
            GermOnline:YGL048C Uniprot:Q01939
        Length = 405

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 118/344 (34%), Positives = 190/344 (55%)

Query:   184 DTEIFCEGEPVRRED--ENRL-DEVGYDDVGGVRKIAKDTHGYVGADLAALCTEAALQCI 240
             + +I  + E VRR +   N L D+V +  +    ++ ++   YVG  +  +  +  L  +
Sbjct:    31 ELKIRSKTENVRRLEAQRNALNDKVRF--IKDELRLLQEPGSYVGEVIKIVSDKKVLVKV 88

Query:   241 R-EKMDVIDLEDETIDAEILNSMAV---TDEHF--KTALGTSNPSALRETVVEVPNVNWE 294
             + E   ++D+  +    ++  S  V   +D +   K     ++P      V +VP+  ++
Sbjct:    89 QPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYD 148

Query:   295 DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 354
              +GGL    +E++E ++ PV+HPE FE  G++  KGV+ YGPPG GKTLLA+A+A+    
Sbjct:   149 MVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDC 208

Query:   355 NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXX 414
              FI V G EL+  + GE    VRE+F  AR+ AP ++F DE+DSI +             
Sbjct:   209 KFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEV 268

Query:   415 XXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIF 474
                + +LL ++DG    K + II ATNR DI+DPALLRPGR+D+ I  P P   +R +I 
Sbjct:   269 QRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEIL 328

Query:   475 KACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
             +   RK  +++ ++LR +A+   G SGAD+  +C  A  YA+RE
Sbjct:   329 RIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRE 372


>UNIPROTKB|Q3AFJ8 [details] [associations]
            symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
            "metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
            catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
            HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
            ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
            GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
            BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
        Length = 619

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 101/241 (41%), Positives = 147/241 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E   V + D+ G++ VK EL E V++ +++P K+ + G    KGVL +G PG GKTLLA+
Sbjct:   151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             AIA E    F S+ G + + M+ G   + VR++F++A+++APC++F DE+D++  Q    
Sbjct:   210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAG 269

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        LNQLL EMDG ++ + + II ATNRPDI+DPALLRPGR D+ I +  PD
Sbjct:   270 LGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPD 329

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIER 526
                R +I K  ++  P+  DVDL  LA+ T GF+GAD+  +   A   A R N +K I  
Sbjct:   330 INGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRN-KKVINM 388

Query:   527 E 527
             E
Sbjct:   389 E 389


>TIGR_CMR|CHY_0214 [details] [associations]
            symbol:CHY_0214 "cell division protein FtsH"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
            "metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
            Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
            GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
            GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
            TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
            RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
            STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
            PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
            Uniprot:Q3AFJ8
        Length = 619

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 101/241 (41%), Positives = 147/241 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E   V + D+ G++ VK EL E V++ +++P K+ + G    KGVL +G PG GKTLLA+
Sbjct:   151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             AIA E    F S+ G + + M+ G   + VR++F++A+++APC++F DE+D++  Q    
Sbjct:   210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAG 269

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        LNQLL EMDG ++ + + II ATNRPDI+DPALLRPGR D+ I +  PD
Sbjct:   270 LGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPD 329

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIER 526
                R +I K  ++  P+  DVDL  LA+ T GF+GAD+  +   A   A R N +K I  
Sbjct:   330 INGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRN-KKVINM 388

Query:   527 E 527
             E
Sbjct:   389 E 389


>POMBASE|SPBC23G7.12c [details] [associations]
            symbol:rpt6 "19S proteasome regulatory subunit Rpt6
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
            "endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
            base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
            OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
            ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
            EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
            OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
        Length = 403

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 110/311 (35%), Positives = 175/311 (56%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNSMAVT---DEH-- 268
             ++ ++   YVG  +  +     L  +  E   V+D+  +    EI  ++ V    D +  
Sbjct:    60 QLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQL 119

Query:   269 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 328
              K      +P      V ++P+  +E +GGLE   +E++E ++ PV+HPE FE  G+   
Sbjct:   120 IKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQP 179

Query:   329 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 388
             KG+L YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ AP
Sbjct:   180 KGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 239

Query:   389 CVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIID 447
              ++F DE+DSI +++               + +LL ++DG  A K + +I ATNR DI+D
Sbjct:   240 SIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 299

Query:   448 PALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEI 507
             PALLRPGR+D+ I  P P  E+R +I +   R   +++ +DL+++A+   G SGA++  +
Sbjct:   300 PALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGV 359

Query:   508 CQRACKYAIRE 518
             C  A  +A+RE
Sbjct:   360 CTEAGMFALRE 370


>TAIR|locus:2147670 [details] [associations]
            symbol:RPT6A "regulatory particle triple-A ATPase 6A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
            GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
            eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
            EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
            IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
            ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
            PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
            KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
            OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
        Length = 419

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 116/312 (37%), Positives = 177/312 (56%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETID-AEILNSMAVTDEHFKTA 272
             ++ ++   YVG  +  +     L  +  E   V+D+ D++ID  +I  S  V   +    
Sbjct:    76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDI-DKSIDITKITPSTRVALRNDSYV 134

Query:   273 LGTSNPSALRETV----VE-VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             L    PS +   V    VE VP+  ++ IGGL+   +E++E ++ P++HPE FE  G++ 
Sbjct:   135 LHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254

Query:   388 PCVLFFDELDSIAT-QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             P ++F DE+DSI + +               + +LL ++DG  A   + ++ ATNR DI+
Sbjct:   255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             D ALLRPGR+D+ I  P P+EESR  I K   RK  + + +DL+ +A+   G SGA++  
Sbjct:   315 DQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKA 374

Query:   507 ICQRACKYAIRE 518
             +C  A  +A+RE
Sbjct:   375 VCTEAGMFALRE 386


>WB|WBGene00004504 [details] [associations]
            symbol:rpt-4 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
            subcomplex" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
            GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
            GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
            GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
            RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
            IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
            PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
            KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
            WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
            OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
        Length = 406

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 99/238 (41%), Positives = 147/238 (61%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N+++ D+GGL    REL+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A
Sbjct:   146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL ++DG  +   V +I ATNRPD +DPALLRPGRLD+ I I LP+E+S
Sbjct:   266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325

Query:   470 RLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
             RL+I K    K     ++D  A+ K + GFS AD+  +C  A  +AIR   E  I+ +
Sbjct:   326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDED 383


>UNIPROTKB|O17071 [details] [associations]
            symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
            species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
            protein binding" evidence=IPI] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
            GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
            GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
            GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
            RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
            IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
            PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
            KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
            WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
            OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
        Length = 406

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 99/238 (41%), Positives = 147/238 (61%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             N+++ D+GGL    REL+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A
Sbjct:   146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++   NF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL ++DG  +   V +I ATNRPD +DPALLRPGRLD+ I I LP+E+S
Sbjct:   266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325

Query:   470 RLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
             RL+I K    K     ++D  A+ K + GFS AD+  +C  A  +AIR   E  I+ +
Sbjct:   326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDED 383


>UNIPROTKB|F1NSP7 [details] [associations]
            symbol:PSMC1 "26S protease regulatory subunit 4"
            species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0022624 "proteasome accessory complex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
            GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
            EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
            Uniprot:F1NSP7
        Length = 439

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    88 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 143

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   144 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 199

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   200 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 259

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   260 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 319

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   320 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 379

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   380 DELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 424


>UNIPROTKB|F1NTZ4 [details] [associations]
            symbol:PSMC1 "26S protease regulatory subunit 4"
            species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0022624 "proteasome accessory complex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
            GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
            IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
            Uniprot:F1NTZ4
        Length = 438

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    87 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 142

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   143 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 198

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   199 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 258

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   259 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 318

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   319 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 378

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   379 DELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 423


>TAIR|locus:2147685 [details] [associations]
            symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
            GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
            EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
            IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
            ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
            PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
            KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
            OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
        Length = 419

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 115/312 (36%), Positives = 177/312 (56%)

Query:   215 KIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDETID-AEILNSMAVTDEHFKTA 272
             ++ ++   YVG  +  +     L  +  E   V+D+ D++ID  ++  S  V   +    
Sbjct:    76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDI-DKSIDITKLTPSTRVALRNDSYV 134

Query:   273 LGTSNPSALRETV----VE-VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 327
             L    PS +   V    VE VP+  ++ IGGL+   +E++E ++ P++HPE FE  G++ 
Sbjct:   135 LHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194

Query:   328 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 387
              KGVL YGPPG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ A
Sbjct:   195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254

Query:   388 PCVLFFDELDSIAT-QXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDII 446
             P ++F DE+DSI + +               + +LL ++DG  A   + ++ ATNR DI+
Sbjct:   255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314

Query:   447 DPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITE 506
             D ALLRPGR+D+ I  P P+EESR  I K   RK  + + +DL+ +A+   G SGA++  
Sbjct:   315 DQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKA 374

Query:   507 ICQRACKYAIRE 518
             +C  A  +A+RE
Sbjct:   375 VCTEAGMFALRE 386


>ASPGD|ASPL0000036562 [details] [associations]
            symbol:AN2904 species:162425 "Emericella nidulans"
            [GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
            GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
            OMA:EDAYSAQ Uniprot:C8VJ79
        Length = 422

 Score = 483 (175.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 102/244 (41%), Positives = 145/244 (59%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E P+V + D+GGL+  K+E++E V+ P+ H + +++ G+ P +GVL YGPPG GKT+L K
Sbjct:   159 EKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVK 218

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+AN   A+FI V G E +  + GE    VR++F  AR+++P ++F DE+D+IAT+    
Sbjct:   219 AVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDA 278

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP-LP 465
                        L +LL +MDG      V +I ATNR D +DPALLRPGRLD+ I  P L 
Sbjct:   279 QTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLR 338

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IE 521
             D   R  IF     K  +S +VDL +L    +  SGA I  I Q A   A+R+N    I+
Sbjct:   339 DRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQ 398

Query:   522 KDIE 525
              D+E
Sbjct:   399 SDLE 402

 Score = 40 (19.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query:   199 ENRLDEVGYDDVGGV 213
             EN   +V Y DVGG+
Sbjct:   157 ENEKPDVTYADVGGL 171


>UNIPROTKB|A4FUZ3 [details] [associations]
            symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
            ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
            accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
            OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
            EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
            SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
            InParanoid:A4FUZ3 Uniprot:A4FUZ3
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>UNIPROTKB|F1PQ40 [details] [associations]
            symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
            GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
            RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
            Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
            Uniprot:F1PQ40
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>UNIPROTKB|B4DR63 [details] [associations]
            symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
            regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0022624 "proteasome
            accessory complex" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
            EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
            IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
            Uniprot:B4DR63
        Length = 367

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    16 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 71

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:    72 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 127

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   128 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 187

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   188 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 247

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   248 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 307

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   308 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 352


>UNIPROTKB|P62191 [details] [associations]
            symbol:PSMC1 "26S protease regulatory subunit 4"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
            complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
            evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
            evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
            evidence=TAS] [GO:0000209 "protein polyubiquitination"
            evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
            evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
            [GO:0002474 "antigen processing and presentation of peptide antigen
            via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
            presentation of exogenous peptide antigen via MHC class I,
            TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
            "regulation of cellular amino acid metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
            Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
            Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
            Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
            Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
            GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
            GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
            Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
            OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
            EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
            PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
            ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
            MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
            PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
            Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
            GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
            HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
            InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
            ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
            Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>UNIPROTKB|F2Z5J1 [details] [associations]
            symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
            GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
            RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
            SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
            KEGG:ssc:100155274 Uniprot:F2Z5J1
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>UNIPROTKB|P46472 [details] [associations]
            symbol:psmc2 "26S protease regulatory subunit 7"
            species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
            evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
            GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
            RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
            GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
            Uniprot:P46472
        Length = 433

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 107/287 (37%), Positives = 156/287 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
               V +D+    LA+     +GA+I  +C  A  +AIR   +   E++
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408


>TIGR_CMR|DET_0391 [details] [associations]
            symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
            InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
            Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
            SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
            GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
            GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
            HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
            RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
            STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
            ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
            Uniprot:Q3Z9G3
        Length = 608

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 115/314 (36%), Positives = 169/314 (53%)

Query:   286 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 345
             ++ P + + ++ G++  K+E+ E V++ ++  EKF+  G    KG+L  GPPG GKTLLA
Sbjct:   151 MDKPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLA 209

Query:   346 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXX 405
             KAIA E    F S+ G E + M+ G   + VR++FD+A+++APC++F DE+D++  Q   
Sbjct:   210 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGA 269

Query:   406 XXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 465
                         LNQ+L EMDG     +V +I ATNRPDI+DPALLRPGR D+ + +  P
Sbjct:   270 GLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKP 329

Query:   466 DEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN---IE- 521
             D   R  I K   +  P++  V+L  LAK T GFSGAD+  +   A   A R+N   +E 
Sbjct:   330 DITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVET 389

Query:   522 KDIERERRRS-ENPXXXXXXXXXXXXXIKAVHFEESMKYARRSVSDAD-IRKYQAFAQ-- 577
             +D+E    R    P             + A H E       R V  AD + K    A+  
Sbjct:   390 EDLEESIDRVIAGPERKSRRISTQEKEVTAYH-ETGHGLVLRLVQGADPVHKISIVARGM 448

Query:   578 TLQQSRGFGSEFRF 591
             TL  +R   +E R+
Sbjct:   449 TLGHTRQLPNEDRY 462


>MGI|MGI:106054 [details] [associations]
            symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
            ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
            "TBP-class protein binding" evidence=ISO] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
            "proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
            catabolic process" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
            OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
            RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
            SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
            REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
            Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
            InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
            GermOnline:ENSMUSG00000021178 Uniprot:P62192
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>RGD|621097 [details] [associations]
            symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
            ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
            evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
            protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
            complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
            GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
            GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
            EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
            ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
            PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
            KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
            Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
        Length = 440

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>WB|WBGene00018991 [details] [associations]
            symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
            regulation of locomotion" evidence=IMP] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
            GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
            EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
            SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
            EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
            UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
            OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
        Length = 432

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 98/234 (41%), Positives = 146/234 (62%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V +VP+  +E +GGL+   +E++E ++ PV+HPE F+  G++  KGVL YGPPG GKTLL
Sbjct:   166 VEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 225

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A+A+  +  FI V G EL+  + GE    VRE+F  AR+ AP ++F DE+DSI +   
Sbjct:   226 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRV 285

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG  A K + +I ATNR DI+D ALLRPGR+D+ I  P 
Sbjct:   286 EGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 345

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
             PDE++R QI K   RK  + + + +  +A+   G SGA++  +C  A  +A+RE
Sbjct:   346 PDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRE 399


>DICTYBASE|DDB_G0289003 [details] [associations]
            symbol:psmC4 "HIV TAT binding-protein-related"
            species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
            vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
            evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
            "proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
            particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
            "proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
            evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
            GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
            eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
            PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
            STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
            GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
            GO:GO:0005838 Uniprot:P34123
        Length = 403

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 113/289 (39%), Positives = 163/289 (56%)

Query:   253 TIDAEILN-SMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLENVKREL 306
             TID E+L  S +V  +    AL  + P     ++      E P+ ++ DIGG +  K+E+
Sbjct:   103 TIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEM 162

Query:   307 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 366
             +E V+ P+ H   +++ G+ P +GVL YGPPG GKT+LAKA+A+   A FI V G E + 
Sbjct:   163 REAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQ 222

Query:   367 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 426
              + GE    VR++F  AR+++P ++F DE+D+IAT+               L +LL +MD
Sbjct:   223 KYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMD 282

Query:   427 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKD 486
             G      V +I ATNR D +DPALLRPGRLD+ I  PLPD   +  IF+    K  +S +
Sbjct:   283 GFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDE 342

Query:   487 VDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIERERRRS 531
             VDL          SGA+I  ICQ A  +AIR+N    + KD E+  + S
Sbjct:   343 VDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKAS 391


>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
            symbol:PF10_0081 "26S proteasome regulatory
            subunit 4, putative" species:5833 "Plasmodium falciparum"
            [GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
            "proteasome regulatory particle" evidence=ISS] [GO:0006508
            "proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
            GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
            ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
            ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
            PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
            KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
        Length = 448

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 119/357 (33%), Positives = 189/357 (52%)

Query:   184 DTEIFCEGEPVRREDENRLDEVGYDD-------VGGVRKIAKDTHGYVGADLAALCTEAA 236
             + E     E ++  D+    ++  DD       VG + ++  + HG +   +        
Sbjct:    84 EEEYITNQEQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELIDENHGIIATSVGPEYYVNI 143

Query:   237 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 296
             L  + +K D++    E   + +LN+   T+      L   +P      V + P  ++ DI
Sbjct:   144 LSFV-DK-DLL----EPGCSVLLNNK--TNSVVGILLDEVDPLVSVMKVEKAPLESYADI 195

Query:   297 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 356
             GGLE+  +E++E V+ P+ HPE +E  G+ P KGV+ YGPPG GKTLLAKA+ANE  A F
Sbjct:   196 GGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATF 255

Query:   357 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXX 416
             + V G EL+  + G+    VRE+F  A + AP ++F DE+D++ T+              
Sbjct:   256 LRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQR 315

Query:   417 XLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKA 476
              + +LL ++DG  ++  V +I ATNR D +DPAL+RPGR+D+ I +P PD +++ +IF+ 
Sbjct:   316 TMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQI 375

Query:   477 CLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN 533
                K  +S DVDL          SGADI  IC  A   A+RE   K  + + R++ +
Sbjct:   376 HTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARD 432


>UNIPROTKB|E1C4V5 [details] [associations]
            symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
            EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
            Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
        Length = 424

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   113 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 172

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   173 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 232

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   233 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 292

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   293 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 352

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   353 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 389


>UNIPROTKB|F1NFL8 [details] [associations]
            symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0022624 "proteasome accessory complex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
            GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
            GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
            IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
            Uniprot:F1NFL8
        Length = 432

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 240

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   361 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 397


>UNIPROTKB|Q5E9F9 [details] [associations]
            symbol:PSMC2 "26S protease regulatory subunit 7"
            species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
            body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
            evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
            GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
            HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
            EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
            UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
            Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
            GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
            Uniprot:Q5E9F9
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|F1PPH7 [details] [associations]
            symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0022624 "proteasome accessory complex"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
            GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
            OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
            RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
            Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
            Uniprot:F1PPH7
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|P35998 [details] [associations]
            symbol:PSMC2 "26S protease regulatory subunit 7"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
            [GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            [GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
            transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
            phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
            polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
            mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
            evidence=TAS] [GO:0002474 "antigen processing and presentation of
            peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
            processing and presentation of exogenous peptide antigen via MHC
            class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
            "regulation of cellular amino acid metabolic process" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0016032 "viral reproduction"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
            "anaphase-promoting complex-dependent proteasomal
            ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0034641 "cellular nitrogen compound metabolic process"
            evidence=TAS] [GO:0042590 "antigen processing and presentation of
            exogenous peptide antigen via MHC class I" evidence=TAS]
            [GO:0042981 "regulation of apoptotic process" evidence=TAS]
            [GO:0044281 "small molecule metabolic process" evidence=TAS]
            [GO:0051436 "negative regulation of ubiquitin-protein ligase
            activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
            "positive regulation of ubiquitin-protein ligase activity involved
            in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
            ubiquitin-protein ligase activity involved in mitotic cell cycle"
            evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
            Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
            Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
            GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
            GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
            GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
            GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
            GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
            EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
            EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
            RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
            ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
            MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
            OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
            REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
            PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
            Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
            GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
            neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
            PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
            ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
            Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|F1SB53 [details] [associations]
            symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
            OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
        Length = 475

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   164 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 223

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   224 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 283

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   284 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 343

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   344 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 403

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   404 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 440


>UNIPROTKB|I3LJ30 [details] [associations]
            symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
            Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
        Length = 434

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   123 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 182

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   183 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 242

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   243 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 302

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   303 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 362

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   363 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 399


>UNIPROTKB|Q4R4R0 [details] [associations]
            symbol:PSMC2 "26S protease regulatory subunit 7"
            species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
            evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
            GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
            Uniprot:Q4R4R0
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|Q8IJW0 [details] [associations]
            symbol:PF10_0081 "26S proteasome regulatory subunit 4,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
            "endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
            regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
            GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
            TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
            ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
            ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
            PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
            KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
        Length = 448

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 119/357 (33%), Positives = 189/357 (52%)

Query:   184 DTEIFCEGEPVRREDENRLDEVGYDD-------VGGVRKIAKDTHGYVGADLAALCTEAA 236
             + E     E ++  D+    ++  DD       VG + ++  + HG +   +        
Sbjct:    84 EEEYITNQEQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELIDENHGIIATSVGPEYYVNI 143

Query:   237 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 296
             L  + +K D++    E   + +LN+   T+      L   +P      V + P  ++ DI
Sbjct:   144 LSFV-DK-DLL----EPGCSVLLNNK--TNSVVGILLDEVDPLVSVMKVEKAPLESYADI 195

Query:   297 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 356
             GGLE+  +E++E V+ P+ HPE +E  G+ P KGV+ YGPPG GKTLLAKA+ANE  A F
Sbjct:   196 GGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATF 255

Query:   357 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXX 416
             + V G EL+  + G+    VRE+F  A + AP ++F DE+D++ T+              
Sbjct:   256 LRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQR 315

Query:   417 XLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKA 476
              + +LL ++DG  ++  V +I ATNR D +DPAL+RPGR+D+ I +P PD +++ +IF+ 
Sbjct:   316 TMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQI 375

Query:   477 CLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN 533
                K  +S DVDL          SGADI  IC  A   A+RE   K  + + R++ +
Sbjct:   376 HTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARD 432


>UNIPROTKB|Q9FXT8 [details] [associations]
            symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
            sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
            GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
            EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
            OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
            EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
            STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
            KEGG:osa:4328642 Uniprot:Q9FXT8
        Length = 400

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 99/236 (41%), Positives = 150/236 (63%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             NV++  +GGL +  REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct:   136 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             +   ANF+ +    ++  + GES   +RE+F  AR   PC++F DE+D+I  +       
Sbjct:   196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 255

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL ++DG      V +I ATNRPD++DPALLRPGRLD+ I IPLP+E++
Sbjct:   256 ADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQA 315

Query:   470 RLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKD 523
             R+++ K  +  + ++K  ++D  A+ K  +GF+GAD+  +C  A   AIR   E+D
Sbjct:   316 RMEVLK--IHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRA--ERD 367


>MGI|MGI:109555 [details] [associations]
            symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
            ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
            evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0022624 "proteasome accessory complex"
            evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
            EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
            UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
            STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
            SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
            Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
            Uniprot:P46471
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>RGD|3428 [details] [associations]
            symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
          2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
          evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
          evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
          "nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
          [GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
          catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
          protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
          activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
          evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
          evidence=IEA] [GO:0022624 "proteasome accessory complex"
          evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
          evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
          InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
          InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
          RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
          GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
          HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
          CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
          IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
          ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
          STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
          KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
          GermOnline:ENSRNOG00000012026 Uniprot:Q63347
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|Q63347 [details] [associations]
            symbol:Psmc2 "26S protease regulatory subunit 7"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
            EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
            RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
            IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
            PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
            NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
            Uniprot:Q63347
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
            symbol:psmc2 "proteasome (prosome, macropain) 26S
            subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
            KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
            OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
            IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
            Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
            InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
        Length = 433

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/277 (38%), Positives = 152/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>TIGR_CMR|SO_1197 [details] [associations]
            symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
            species:211586 "Shewanella oneidensis MR-1" [GO:0004222
            "metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
            GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
            GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
            HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
            OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
            GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
            ProtClustDB:CLSK906146 Uniprot:Q8EHM2
        Length = 652

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 99/248 (39%), Positives = 145/248 (58%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             + G S    + E  ++     + D+ G +  K E++E V Y +  P KF+K G     GV
Sbjct:   138 SFGKSKAKLMSEDQIKT---TFADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGV 193

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLAKAIA E +  F ++ G + + M+ G   + VR++F++A++SAPC++
Sbjct:   194 LMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCII 253

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++  Q               LNQ+L EMDG    + + +I ATNRPD++D ALL
Sbjct:   254 FIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALL 313

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + + LPD   R QI K  +RK P+S+DV    +A+ T GFSGAD+  +   A
Sbjct:   314 RPGRFDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEA 373

Query:   512 CKYAIREN 519
               +A R N
Sbjct:   374 ALFAARGN 381


>TIGR_CMR|BA_0064 [details] [associations]
            symbol:BA_0064 "cell division protein FtsH" species:198094
            "Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
            evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
            evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
            "ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
            Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
            GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
            GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
            ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
            RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
            SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
            EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
            EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
            GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
            BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
            Uniprot:Q81VX5
        Length = 633

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 98/236 (41%), Positives = 142/236 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             E   V + D+ G +  K+EL E V++ ++ P KF + G    KGVL  GPPG GKTLLA+
Sbjct:   155 EKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+A E    F S+ G + + M+ G   + VR++F+ A+++APC++F DE+D++  Q    
Sbjct:   214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        LNQLL EMDG  A + + II ATNRPDI+DPALLRPGR D+ I +  PD
Sbjct:   274 LGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPD 333

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
                R  + K   R  P+ ++++LRA+A  T GFSGAD+  +   A   A R++ +K
Sbjct:   334 VNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKK 389


>ZFIN|ZDB-GENE-040625-69 [details] [associations]
            symbol:psmc1b "proteasome (prosome, macropain) 26S
            subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
            KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
            IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
            Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
            InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
        Length = 440

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 119/345 (34%), Positives = 190/345 (55%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  V++DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
            symbol:PF13_0033 "26S proteasome regulatory
            subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
            "proteasome regulatory particle" evidence=ISS] [GO:0004175
            "endopeptidase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
            GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
            GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
            PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
            KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
        Length = 393

 Score = 479 (173.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 95/244 (38%), Positives = 145/244 (59%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             VN+  IGGL    R+++E V+ P+ +P  +++ G+   KGVL YGPPG GKTLLA+A+A+
Sbjct:   134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 NF+ +    ++  + GES   +RE+F+ A++  PC++F DE+D+I  +        
Sbjct:   194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L +LL  +DG      V II ATNRPD++DPAL+RPGRLD+ I IPLP+E +R
Sbjct:   254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             ++I K    K     D+D  ++ +   GF+GAD+  +C  A  +AIR      IE+D  +
Sbjct:   314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373

Query:   527 ERRR 530
               R+
Sbjct:   374 AARK 377

 Score = 40 (19.1 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query:   197 EDENRLDEVGYDDVGGV 213
             + EN  ++V Y+ +GG+
Sbjct:   126 KSENSTNKVNYNQIGGL 142


>UNIPROTKB|Q8IEQ1 [details] [associations]
            symbol:PF13_0033 "26S proteasome regulatory subunit,
            putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
            "endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
            regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=ISS] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
            EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
            OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
            RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
            EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
            EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
        Length = 393

 Score = 479 (173.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 95/244 (38%), Positives = 145/244 (59%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             VN+  IGGL    R+++E V+ P+ +P  +++ G+   KGVL YGPPG GKTLLA+A+A+
Sbjct:   134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
                 NF+ +    ++  + GES   +RE+F+ A++  PC++F DE+D+I  +        
Sbjct:   194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    L +LL  +DG      V II ATNRPD++DPAL+RPGRLD+ I IPLP+E +R
Sbjct:   254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN----IEKDIER 526
             ++I K    K     D+D  ++ +   GF+GAD+  +C  A  +AIR      IE+D  +
Sbjct:   314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373

Query:   527 ERRR 530
               R+
Sbjct:   374 AARK 377

 Score = 40 (19.1 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query:   197 EDENRLDEVGYDDVGGV 213
             + EN  ++V Y+ +GG+
Sbjct:   126 KSENSTNKVNYNQIGGL 142


>UNIPROTKB|Q55700 [details] [associations]
            symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
            species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
            [GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
            "thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
            GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
            EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
            HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
            RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
            IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
            GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
            OMA:NTASTRM Uniprot:Q55700
        Length = 627

 Score = 481 (174.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
 Identities = 92/221 (41%), Positives = 133/221 (60%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++D+ G++  K ELQE V + ++ PE+F   G    KGVL  GPPG GKTLLAKAIA 
Sbjct:   169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E    F S+ G E + M+ G   + VR++F KA+++APC++F DE+D++  Q        
Sbjct:   228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    LNQLLTEMDG      + II ATNRPD++D AL+RPGR D+ + +  PD   R
Sbjct:   288 NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGR 347

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
              +I +   R   ++ +V + ++A+ T GFSGAD+  +   A
Sbjct:   348 KEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEA 388

 Score = 37 (18.1 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query:   164 RSVEFKV-IETDPPEYCVVAPDTEIFCEGEPVR 195
             R++  +V + T+ PE      D+ I  +  PVR
Sbjct:    80 RTLRSRVDLPTNAPELIARLRDSNIRLDSHPVR 112


>FB|FBgn0028687 [details] [associations]
            symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
            species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
            regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
            "proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
            activity" evidence=IDA] [GO:0005838 "proteasome regulatory
            particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
            evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
            GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
            KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
            EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
            SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
            GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
            FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
            OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
        Length = 433

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 105/287 (36%), Positives = 156/287 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D     +I   M V  +  K  +    P  +  TV      + P+V + D+GG +
Sbjct:   122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPEKF   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ +   LPD++ R  IFK   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
               V +D+    LA+     +GA+I  +C  A  +AIR   +   E++
Sbjct:   362 MSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408


>FB|FBgn0028685 [details] [associations]
            symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
            species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
            regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
            "proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
            activity" evidence=IDA] [GO:0005838 "proteasome regulatory
            particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
            complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:1901838 "positive regulation of transcription of nuclear large
            rRNA transcript from RNA polymerase I promoter" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
            regulatory region sequence-specific DNA binding" evidence=IDA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
            GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
            TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
            ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
            PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
            OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
            Uniprot:Q8SZ19
        Length = 397

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 100/236 (42%), Positives = 146/236 (61%)

Query:   290 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 349
             +V +  IGGL +  REL+E ++ P+ +PE F + G++P KG L YGPPG GKTLLA+A+A
Sbjct:   137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVA 196

Query:   350 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXX 409
             ++  ANF+ V    ++  + GES   +RE+F+ AR   PC++F DE+D+I  +       
Sbjct:   197 SQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 256

Query:   410 XXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES 469
                     L +LL +MDG  +   V +I ATNRPD +DPALLRPGRLD+ I IPLP+E++
Sbjct:   257 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQA 316

Query:   470 RLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 525
             RL+I K    K     ++D  A+ K +  F+GAD+  +C  A  +AIR   E  I+
Sbjct:   317 RLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQ 372


>DICTYBASE|DDB_G0292382 [details] [associations]
            symbol:psmC5 "HIV TAT binding-protein-related"
            species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
            catabolic process" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0005838 "proteasome regulatory particle"
            evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
            GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
            GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
            ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
            GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
            ProtClustDB:CLSZ2429412 Uniprot:P34124
        Length = 403

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 105/280 (37%), Positives = 165/280 (58%)

Query:   246 VIDLEDETID-AEILNSMAVTDEHFKTALGTSNPSALRETV----VE-VPNVNWEDIGGL 299
             V+D+ D T+D A++  S     +H    L    P+ +   V    VE +P+  ++ +GGL
Sbjct:    92 VVDI-DPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGL 150

Query:   300 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 359
             +   +E++E ++ P++HPE FE  G++  KGVL YGPPG GKTLLA+A+A+     FI V
Sbjct:   151 DKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRV 210

Query:   360 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXL 418
              G EL+  + GE    VRE+F  AR+ AP ++F DE+DSI +++               +
Sbjct:   211 SGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTM 270

Query:   419 NQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACL 478
              +LL ++DG  + K + ++  TNR DI+DPALLRPGR+D+ I  P P +  RL I K   
Sbjct:   271 LELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHS 330

Query:   479 RKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 518
             RK  +++ ++L+ ++    G SGA++  +C  A  YA+RE
Sbjct:   331 RKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRE 370


>UNIPROTKB|Q90732 [details] [associations]
            symbol:PSMC1 "26S protease regulatory subunit 4"
            species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0030163 "protein catabolic process"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
            GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
            GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
            IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
            ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
            KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
            NextBio:20815872 Uniprot:Q90732
        Length = 440

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 117/345 (33%), Positives = 189/345 (54%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      + + P   + DIGGL+N  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A +  P ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  ++ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>TIGR_CMR|GSU_1180 [details] [associations]
            symbol:GSU_1180 "cell division protein FtsH"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
            TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
            RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
            GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
            ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
            Uniprot:Q74DY5
        Length = 617

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 98/229 (42%), Positives = 137/229 (59%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V ++D+ G+EN K EL+E V Y +  P+KF++ G    KGVL  GPPG GKTLLA+A+A 
Sbjct:   172 VTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAG 230

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E    F+S+   + + M+ G     VR++F  A++SAP ++F DELD++           
Sbjct:   231 EADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGG 290

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    LNQLL+EMDG  +   V ++ ATNRPD++DPALLRPGR D+ + I  PD   R
Sbjct:   291 HDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDR 350

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIREN 519
              +I     RK P+ KDVDL  +A+ T G +GAD+  +   A   A REN
Sbjct:   351 EKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAAREN 399


>UNIPROTKB|Q5R8D7 [details] [associations]
            symbol:PSMC2 "26S protease regulatory subunit 7"
            species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
            evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0022624 "proteasome accessory complex" evidence=ISS]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
            GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
            KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
            UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
            GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
            Uniprot:Q5R8D7
        Length = 433

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 105/277 (37%), Positives = 151/277 (54%)

Query:   246 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 300
             V+DL D+    +I   M V  +  K  +    P  +  TV      E P+V + D+GG +
Sbjct:   122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181

Query:   301 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 360
                 +L+E V+ P+ HPE+F   G+ P KGVL +GPPG GKTL A+A+AN   A FI V 
Sbjct:   182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241

Query:   361 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 420
             G EL+  + GE    VRE+F+ AR    C++FFDE+D+I                  + +
Sbjct:   242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301

Query:   421 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRK 480
             L+ ++DG   +  + ++ ATNRPD +DPAL+RPGRLD+ I   LPD E R  I K   R 
Sbjct:   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARS 361

Query:   481 SPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 517
               V +D+    LA+     +GA+I  +C  A  +AIR
Sbjct:   362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398


>UNIPROTKB|Q9KU86 [details] [associations]
            symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
            InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
            Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
            SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
            GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
            GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
            GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
            KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
            ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
            KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
            Uniprot:Q9KU86
        Length = 651

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 95/248 (38%), Positives = 146/248 (58%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             + G S    + E  ++     + D+ G +  K +++E V Y +  P +F+K G     GV
Sbjct:   137 SFGKSKARMMSEDQIKT---TFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGV 192

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLAKAIA E +  F ++ G + + M+ G   + VR++F++A++++PC++
Sbjct:   193 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCII 252

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++  Q               LNQ+L EMDG    + + +I ATNRPD++DPALL
Sbjct:   253 FIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALL 312

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + + LPD   R QI K  +RK P++ DV+   +A+ T GFSGAD+  +   A
Sbjct:   313 RPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEA 372

Query:   512 CKYAIREN 519
               +A R N
Sbjct:   373 ALFAARGN 380


>TIGR_CMR|VC_0637 [details] [associations]
            symbol:VC_0637 "cell division protein FtsH" species:686
            "Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
            evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
            InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
            PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
            GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
            GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
            HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
            RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
            DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
            ProtClustDB:CLSK874054 Uniprot:Q9KU86
        Length = 651

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 95/248 (38%), Positives = 146/248 (58%)

Query:   272 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 331
             + G S    + E  ++     + D+ G +  K +++E V Y +  P +F+K G     GV
Sbjct:   137 SFGKSKARMMSEDQIKT---TFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGV 192

Query:   332 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 391
             L  GPPG GKTLLAKAIA E +  F ++ G + + M+ G   + VR++F++A++++PC++
Sbjct:   193 LMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCII 252

Query:   392 FFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALL 451
             F DE+D++  Q               LNQ+L EMDG    + + +I ATNRPD++DPALL
Sbjct:   253 FIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALL 312

Query:   452 RPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRA 511
             RPGR D+ + + LPD   R QI K  +RK P++ DV+   +A+ T GFSGAD+  +   A
Sbjct:   313 RPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEA 372

Query:   512 CKYAIREN 519
               +A R N
Sbjct:   373 ALFAARGN 380


>FB|FBgn0035443 [details] [associations]
            symbol:CG12010 species:7227 "Drosophila melanogaster"
            [GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
            UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
            FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
            RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
            IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
            UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
            ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
        Length = 736

 Score = 500 (181.1 bits), Expect = 1.3e-47, P = 1.3e-47
 Identities = 125/345 (36%), Positives = 193/345 (55%)

Query:   190 EGEPVRREDENRLDEVGYDDVGG--VRKIAKDTHGYVGADLAALCTEAALQCIREKMDVI 247
             EG+  RR+    L EV   ++    +  IA++T GYV ADL  L     L+ +++++   
Sbjct:   381 EGQ--RRQLVEHLCEVHELNISQTLLEHIARNTQGYVIADLTLL-----LRRVQQQL--- 430

Query:   248 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVN--WEDIGGLENVKRE 305
              L  +  D E +         F  +L  + PSA R T V V  +   +E IGG+E +KR 
Sbjct:   431 -LTKDDFDIEHI---------FLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRT 480

Query:   306 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 365
             LQ +V   +     F +FG+S  KGVL YGPPGC KT +AK +A E    FI+    E+ 
Sbjct:   481 LQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVY 540

Query:   366 TMWFGESEANVREIFDKARQSAPCVLFFDELDS-IATQXXXXXXXXXXXXXXXLNQLLTE 424
             + + G +E  +  IFD AR++APC++F DE+DS +  +               L+ LLTE
Sbjct:   541 SPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTE 600

Query:   425 MDGM---SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKS 481
             M+G+    +++ + ++ ATNRPD+ID ALLRPGR D+LI++P PDE+SRL + K   ++ 
Sbjct:   601 MNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRM 660

Query:   482 PVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK-DIE 525
             P  ++V L+ +A  T  +SGAD+  +C  A   A + + +  +IE
Sbjct:   661 PFHENVFLQEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATEIE 705


>WB|WBGene00004195 [details] [associations]
            symbol:prx-6 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
            junction helicase activity" evidence=IEA] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0040015 "negative
            regulation of multicellular organism growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
            GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
            GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
            EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
            UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
            EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
            CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
            Uniprot:G5EFR8
        Length = 720

 Score = 480 (174.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
 Identities = 104/251 (41%), Positives = 158/251 (62%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             ++PNV WED+GGLE  K+ + E+++  +     F    +  S G++ YG PGCGKTL+AK
Sbjct:   458 KIPNVRWEDVGGLEETKQTVLESIRTNL-----FGSRALKRS-GIILYGSPGCGKTLIAK 511

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+A E +  F+SVKGPELL  + G+SE N+R++F++A+Q++PCV+FFDE+DS+A      
Sbjct:   512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRN 571

Query:   407 XXXXXXXXXXXLNQLLTEMDGM--SAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI-P 463
                        ++QLL E+D +  S    VF++GATNRPD++D +L+ PGR D+L+ + P
Sbjct:   572 GDSGGVIDRI-VSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKP 630

Query:   464 LPDEESRLQIFKACLRKSPVSKDVDLRALA-KYTQGFSGADITEICQRACKYAIRENIEK 522
               D ES+ +I +A  RK    +DVDLR +A K  +  SGA +  I   A   AI E I+ 
Sbjct:   631 GEDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQS 690

Query:   523 DIERERRRSEN 533
              IE  +  +++
Sbjct:   691 -IEDGKTENQS 700

 Score = 40 (19.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query:   216 IAKDTHGYVGADLAALCTEAALQCIREKMDVI--DLEDE 252
             +AK T G+  A+L  L        I EK + +  DL D+
Sbjct:   407 VAKKTSGFTLAELEKLVKNGKKVKIEEKEEKVYEDLIDK 445


>ASPGD|ASPL0000064945 [details] [associations]
            symbol:AN6988 species:162425 "Emericella nidulans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
            "nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
            storage granule" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
            assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0032968 "positive regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006289
            "nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
            InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
            Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
            EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
            RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
            EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
            Uniprot:Q5AXJ2
        Length = 389

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 110/302 (36%), Positives = 170/302 (56%)

Query:   223 YVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEIL--NSMAVTDEHFKTA--LGTS- 276
             YVG  +  + T+  L  +  E   V+D+ D     ++     +A+  + +K    L +S 
Sbjct:    55 YVGEVVKVMSTKKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSV 114

Query:   277 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 336
             +P      V +VP+  ++ IGGL+   +E++E ++  ++HPE FE  G++  KGVL YGP
Sbjct:   115 DPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGP 174

Query:   337 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 396
             PG GKTLLA+A+A+     FI V G EL+  + GE    VRE+F  AR+ AP ++F DE+
Sbjct:   175 PGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 234

Query:   397 DSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRL 456
             DSI +                + +LL ++DG    K + II ATNR DI+DPALLRPGR+
Sbjct:   235 DSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRI 294

Query:   457 DQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAI 516
             D+ I  P P  E+R  I +   R   +++ ++L  +A+   G SGA++  +C  A  YA+
Sbjct:   295 DRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYAL 354

Query:   517 RE 518
             RE
Sbjct:   355 RE 356


>TIGR_CMR|NSE_0423 [details] [associations]
            symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
            species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
            activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
            InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
            Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
            SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
            GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
            TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
            HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
            ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
            KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
            ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
            Uniprot:Q2GDY7
        Length = 636

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 98/237 (41%), Positives = 144/237 (60%)

Query:   291 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 350
             V + D+ G++  K EL E V++ +  P+KF+K G    KG L  GPPG GKTLLAKAIA 
Sbjct:   154 VTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212

Query:   351 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXX 410
             E +  F S+ G + + M+ G   + VR++F++ +++APC++F DE+D++           
Sbjct:   213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGG 272

Query:   411 XXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 470
                    LNQLL EMDG  A + V II ATNRPD++DPALLRPGR D+ I I +PD   R
Sbjct:   273 NDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGR 332

Query:   471 LQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 527
              +I +  L+K P + +V++  +A+ T GFSGAD+  +   +   A R N +K +  E
Sbjct:   333 QKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRN-KKVVTNE 388


>SGD|S000005785 [details] [associations]
            symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
            proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
            RNA polymerase II transcriptional preinitiation complex assembly"
            evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
            particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
            complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
            assembly" evidence=IMP] [GO:0030433 "ER-associated protein
            catabolic process" evidence=IMP] [GO:0032968 "positive regulation
            of transcription elongation from RNA polymerase II promoter"
            evidence=IMP] [GO:0006289 "nucleotide-excision repair"
            evidence=IGI] [GO:0019904 "protein domain specific binding"
            evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
            GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
            RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
            GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
            HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
            GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
            PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
            ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
            MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
            EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
            NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
            Uniprot:P53549
        Length = 437

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 103/244 (42%), Positives = 144/244 (59%)

Query:   276 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 335
             ++P     T  E   + ++ IGGL    REL+E ++ P+++PE F++ G+ P KGVL YG
Sbjct:   163 TDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYG 222

Query:   336 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 395
             PPG GKTLLAKA+A    ANFI      ++  + GES   +RE+F  A++  PC++F DE
Sbjct:   223 PPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE 282

Query:   396 LDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGR 455
             +D+I  +               L +LLT+MDG        II ATNRPD +DPALLRPGR
Sbjct:   283 VDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGR 342

Query:   456 LDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYA 515
             LD+ + IPLP+E  RL+IFK    K   + + D  A  K + GF+GADI      A  +A
Sbjct:   343 LDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFA 402

Query:   516 IREN 519
             IR++
Sbjct:   403 IRDD 406


>UNIPROTKB|C9JUP7 [details] [associations]
            symbol:VCP "Transitional endoplasmic reticulum ATPase"
            species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
            transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
            "polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
            binding" evidence=IEA] [GO:0032436 "positive regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
            [GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
            homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
            evidence=IEA] InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359
            GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0043234
            GO:GO:0051260 GO:GO:0016887 GO:GO:0006919 GO:GO:0006511
            GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
            GO:GO:0032436 PANTHER:PTHR23077:SF18 SMART:SM01073 GO:GO:0070842
            EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP HOGENOM:HOG000184195
            IPI:IPI00916175 ProteinModelPortal:C9JUP7 SMR:C9JUP7 STRING:C9JUP7
            PRIDE:C9JUP7 Ensembl:ENST00000417448 ArrayExpress:C9JUP7
            Bgee:C9JUP7 Uniprot:C9JUP7
        Length = 115

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 84/115 (73%), Positives = 105/115 (91%)

Query:    51 MEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQC 110
             M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+  C
Sbjct:     1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60

Query:   111 ADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRS 165
              DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+
Sbjct:    61 PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRA 115


>FB|FBgn0015282 [details] [associations]
            symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
            species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
            evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
            evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
            [GO:0008540 "proteasome regulatory particle, base subcomplex"
            evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
            [GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
            [GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
            spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
            elongation" evidence=IMP] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
            GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
            eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
            OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
            RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
            SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
            STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
            GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
            InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
            BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
            Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
        Length = 439

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 97/246 (39%), Positives = 150/246 (60%)

Query:   287 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 346
             + P   + DIGGL+   +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAK
Sbjct:   177 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 236

Query:   347 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXXXX 406
             A+AN+  A F+ V G EL+  + G+    VRE+F  A + AP ++F DE+D++ T+    
Sbjct:   237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 296

Query:   407 XXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 466
                        + +LL ++DG  ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPD
Sbjct:   297 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356

Query:   467 EESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIER 526
             E+++ +IF     +  +++DV+L  L       SGADI  IC  A   A+RE   K    
Sbjct:   357 EKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416

Query:   527 ERRRSE 532
             + ++S+
Sbjct:   417 DFKKSK 422


>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
            symbol:psmc1a "proteasome (prosome, macropain) 26S
            subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
            "protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
            InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
            SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
            GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
            TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
            IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
            ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
            KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
            ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
        Length = 440

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 118/345 (34%), Positives = 189/345 (54%)

Query:   192 EPVRREDENRLDEV-GYD-DVGGVRKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 249
             E  + E+ +++D++ G    VG + +I  D H  V   + +    + L  + +K D++  
Sbjct:    89 EEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV-DK-DLL-- 144

Query:   250 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 309
               E   + +LN            +  ++P      V + P   + DIGGL++  +E++E+
Sbjct:   145 --EPGCSVLLNHKV--HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKES 200

Query:   310 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 369
             V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+  A F+ V G EL+  + 
Sbjct:   201 VELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

Query:   370 GESEANVREIFDKARQSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMS 429
             G+    VRE+F  A + AP ++F DE+D+I T+               + +LL ++DG  
Sbjct:   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 320

Query:   430 AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDL 489
             ++  V +I ATNR + +DPAL+RPGR+D+ I  PLPDE+++ +IF+    +  V+ DV L
Sbjct:   321 SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTL 380

Query:   490 RALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRS-EN 533
               L       SGADI  IC  A   A+RE   K    + ++S EN
Sbjct:   381 DDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN 425


>ASPGD|ASPL0000010049 [details] [associations]
            symbol:AN4236 species:162425 "Emericella nidulans"
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
            regulatory particle assembly" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0045899 "positive regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
            regulatory particle, base subcomplex" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
            InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
            GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
            GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
            KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
            RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
            EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
            Uniprot:Q5B5E4
        Length = 465

 Score = 468 (169.8 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
 Identities = 93/238 (39%), Positives = 139/238 (58%)

Query:   285 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 344
             V E P   + DIGGL+    E+ E + +P++  E+F+K G+   KG L YGPPG GKTLL
Sbjct:   202 VDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLL 261

Query:   345 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQXX 404
             A+A A E  A F+ + GP+L+ M+ G+    VR+ F  A++ AP ++F DELD++ T+  
Sbjct:   262 ARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRF 321

Query:   405 XXXXXXXXXXXXXLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 464
                          + +LL ++DG ++   + ++ ATNR D++DPALLR GRLD+ I  PL
Sbjct:   322 DSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPL 381

Query:   465 PDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 522
             P+EE+R  I +   RK  V   V+   LA+ T  F GA +  +C  A   A+R+   K
Sbjct:   382 PNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSK 439

 Score = 42 (19.8 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query:   248 DLEDETIDAEILNS 261
             D +D+ +D EILNS
Sbjct:    47 DEDDDLLDEEILNS 60

WARNING:  HSPs involving 477 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      620       572   0.00080  120 3  11 22  0.40    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  727
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  304 KB (2157 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  47.46u 0.10s 47.56t   Elapsed:  00:00:02
  Total cpu time:  47.52u 0.10s 47.62t   Elapsed:  00:00:02
  Start:  Sat May 11 15:40:30 2013   End:  Sat May 11 15:40:32 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AtCDC48B AtCDC48B AtCDC48B AT3G53230	protein from Arabidopsis thaliana	1.4e-282
BLAST match view associations BLAST with AtCDC48C AtCDC48C AtCDC48C cell division cycle 48C	protein from Arabidopsis thaliana	1.1e-280
BLAST match view associations BLAST with CDC48 CDC48 CDC48 cell division cycle 48	protein from Arabidopsis thaliana	9.0e-279
BLAST match view associations BLAST with cdcD cdcD cdcD CDC48 family AAA ATPase	gene from Dictyostelium discoideum	4.7e-240
BLAST match view associations BLAST with vcp vcp vcp valosin containing protein	gene_product from Danio rerio	8.1e-236
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Homo sapiens	1.0e-235
BLAST match view associations BLAST with Vcp Vcp Vcp valosin containing protein	protein from Mus musculus	1.0e-235
BLAST match view associations BLAST with Vcp Vcp Vcp valosin-containing protein	gene from Rattus norvegicus	1.0e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Bos taurus	3.5e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Bos taurus	3.5e-235
BLAST match view associations BLAST with VCP VCP VCP Uncharacterized protein	protein from Canis lupus familiaris	3.5e-235
BLAST match view associations BLAST with LOC426240 LOC426240 LOC426240 Uncharacterized protein	protein from Gallus gallus	4.4e-235
BLAST match view associations BLAST with LOC426240 LOC426240 LOC426240 Uncharacterized protein	protein from Gallus gallus	4.4e-235
BLAST match view associations BLAST with vcp vcp vcp Transitional endoplasmic reticulum ATPase	protein from Xenopus (Silurana) tropicalis	7.2e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Sus scrofa	7.2e-235
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Sus scrofa	5.1e-234
BLAST match view associations BLAST with vcp vcp vcp Transitional endoplasmic reticulum ATPase	protein from Xenopus laevis	6.5e-234
BLAST match view associations BLAST with zgc:136908 zgc:136908 zgc:136908	gene_product from Danio rerio	3.5e-224
BLAST match view associations BLAST with TER94 TER94 TER94	protein from Drosophila melanogaster	5.3e-219
BLAST match view associations BLAST with cdc-48.2 cdc-48.2 cdc-48.2	gene from Caenorhabditis elegans	1.0e-215
BLAST match view associations BLAST with cdc-48.2 cdc-48.2 cdc-48.2 Transitional endoplasmic reticulum ATPase homolog 2	protein from Caenorhabditis elegans	1.0e-215
BLAST match view associations BLAST with cdc-48.1 cdc-48.1 cdc-48.1	gene from Caenorhabditis elegans	8.4e-210
BLAST match view associations BLAST with cdc-48.1 cdc-48.1 cdc-48.1 Transitional endoplasmic reticulum ATPase homolog 1	protein from Caenorhabditis elegans	8.4e-210
BLAST match view associations BLAST with MGG_05193 MGG_05193 MGG_05193 Cell division control protein 48	protein from Magnaporthe oryzae 70-15	4.6e-198
BLAST match view associations BLAST with CDC48 CDC48 CDC48	gene_product from Candida albicans	9.8e-196
BLAST match view associations BLAST with CDC48 CDC48 CDC48 Putative uncharacterized protein CDC48	protein from Candida albicans SC5314	9.8e-196
BLAST match view associations BLAST with CDC48 CDC48 CDC48 AAA ATPase involved in multiple processes	gene from Saccharomyces cerevisiae	9.0e-193
BLAST match view associations BLAST with PFF0940c PFF0940c PFF0940c cell division cycle protein 48 homologue, putative	gene from Plasmodium falciparum	2.3e-189
BLAST match view associations BLAST with PFF0940c PFF0940c PFF0940c Cell division cycle protein 48 homologue, putative	protein from Plasmodium falciparum 3D7	2.3e-189
BLAST match view associations BLAST with LOC430766 LOC430766 LOC430766 Uncharacterized protein	protein from Gallus gallus	3.3e-150
BLAST match view associations BLAST with PF07_0047 PF07_0047 PF07_0047 cell division cycle ATPase, putative	gene from Plasmodium falciparum	3.4e-113
BLAST match view associations BLAST with PF07_0047 PF07_0047 PF07_0047 Putative cell division cycle ATPase	protein from Plasmodium falciparum 3D7	3.4e-113
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-80
BLAST match view associations BLAST with Spata5 Spata5 Spata5 spermatogenesis associated 5	protein from Mus musculus	5.8e-80
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Spermatogenesis-associated protein 5	protein from Homo sapiens	2.0e-79
BLAST match view associations BLAST with DDB_G0278435 DDB_G0278435 DDB_G0278435 AAA ATPase domain-containing protein	gene from Dictyostelium discoideum	1.8e-74
BLAST match view associations BLAST with CIP111 CIP111 CIP111 Cam interacting protein 111	protein from Arabidopsis thaliana	9.0e-72
BLAST match view associations BLAST with CG5776 CG5776 CG5776	protein from Drosophila melanogaster	9.7e-72
BLAST match view associations BLAST with RIX7 RIX7 RIX7	gene_product from Candida albicans	9.7e-72
BLAST match view associations BLAST with RIX7 RIX7 RIX7 Putative uncharacterized protein	protein from Candida albicans SC5314	9.7e-72
BLAST match view associations BLAST with nvl nvl nvl valosin-containing protein	gene from Dictyostelium discoideum	8.6e-71
BLAST match view associations BLAST with orf19.6432 orf19.6432 orf19.6432	gene_product from Candida albicans	2.0e-69
BLAST match view associations BLAST with Nvl Nvl Nvl nuclear VCP-like	protein from Mus musculus	2.8e-69
BLAST match view associations BLAST with AFG2 AFG2 AFG2 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex	gene from Saccharomyces cerevisiae	3.3e-69
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	3.3e-69
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Gallus gallus	4.2e-69
BLAST match view associations BLAST with Nvl Nvl Nvl nuclear VCP-like	gene from Rattus norvegicus	1.1e-68
BLAST match view associations BLAST with nvl nvl nvl nuclear VCP-like	gene_product from Danio rerio	4.7e-68
BLAST match view associations BLAST with RIX7 RIX7 RIX7 Putative ATPase of the AAA family	gene from Saccharomyces cerevisiae	3.3e-67
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Bos taurus	6.8e-67
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Bos taurus	7.3e-67
BLAST match view associations BLAST with VCP VCP VCP Transitional endoplasmic reticulum ATPase	protein from Homo sapiens	1.1e-66
BLAST match view associations BLAST with CDC48C CDC48C CDC48C cell division cycle 48C	protein from Arabidopsis thaliana	1.8e-66
BLAST match view associations BLAST with mac-1 mac-1 mac-1	gene from Caenorhabditis elegans	4.8e-66
BLAST match view associations BLAST with mac-1 mac-1 mac-1 Protein MAC-1	protein from Caenorhabditis elegans	4.8e-66
BLAST match view associations BLAST with SPATA5 SPATA5 SPATA5 Uncharacterized protein	protein from Sus scrofa	6.4e-66
BLAST match view associations BLAST with pex6 pex6 pex6 peroxin 6	gene from Dictyostelium discoideum	2.4e-65
BLAST match view associations BLAST with Spata5 Spata5 Spata5 spermatogenesis associated 5	gene from Rattus norvegicus	1.2e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with NVL NVL NVL Nuclear valosin-containing protein-like	protein from Homo sapiens	2.0e-63
BLAST match view associations BLAST with smid smid smid smallminded	protein from Drosophila melanogaster	3.1e-63
BLAST match view associations BLAST with cdc-48.3 cdc-48.3 cdc-48.3	gene from Caenorhabditis elegans	5.4e-63
BLAST match view associations BLAST with DDB_G0282241 DDB_G0282241 DDB_G0282241	gene from Dictyostelium discoideum	2.3e-62
BLAST match view associations BLAST with PEX6 PEX6 PEX6 peroxin 6	protein from Arabidopsis thaliana	2.5e-62
BLAST match view associations BLAST with NVL NVL NVL Uncharacterized protein	protein from Canis lupus familiaris	1.3e-61
BLAST match view associations BLAST with CDC48B CDC48B CDC48B cell division cycle 48B	protein from Arabidopsis thaliana	1.3e-61
BLAST match view associations BLAST with pan pan pan Proteasome-activating nucleotidase	protein from Methanocaldococcus jannaschii DSM 2661	6.9e-61
BLAST match view associations BLAST with pex6 pex6 pex6 peroxisomal biogenesis factor 6	gene_product from Danio rerio	8.3e-61
BLAST match view associations BLAST with PEX1 PEX1 PEX1	gene_product from Candida albicans	2.4e-60
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Likely peroxisomal biogenesis AAA ATPase Pex1	protein from Candida albicans SC5314	2.4e-60
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Uncharacterized protein	protein from Gallus gallus	8.1e-60
BLAST match view associations BLAST with PEX6 PEX6 PEX6 AAA-peroxin	gene from Saccharomyces cerevisiae	1.3e-59
BLAST match view associations BLAST with MGG_06686 MGG_06686 MGG_06686 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.6e-59
BLAST match view associations BLAST with Pex6 Pex6 Pex6 peroxisomal biogenesis factor 6	gene from Rattus norvegicus	1.6e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6	gene_product from Candida albicans	3.2e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Likely peroxisomal biogenesis AAA ATPase Pex6	protein from Candida albicans SC5314	3.2e-57
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Peroxisome biogenesis factor 1	protein from Homo sapiens	4.3e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-57
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Uncharacterized protein	protein from Gallus gallus	5.5e-57
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Uncharacterized protein	protein from Gallus gallus	9.2e-57
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Peroxin Pex6p	protein from Macaca fascicularis	1.6e-56
BLAST match view associations BLAST with MGG_00529 MGG_00529 MGG_00529 Peroxisomal biogenesis factor 6	protein from Magnaporthe oryzae 70-15	1.6e-56
BLAST match view associations BLAST with PF14_0126 PF14_0126 PF14_0126 hypothetical protein, conserved	gene from Plasmodium falciparum	1.8e-56
BLAST match view associations BLAST with PF14_0126 PF14_0126 PF14_0126 AAA family ATPase, putative	protein from Plasmodium falciparum 3D7	1.8e-56
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Uncharacterized protein	protein from Bos taurus	2.0e-56
BLAST match view associations BLAST with MAL8P1.92 MAL8P1.92 MAL8P1.92 ATPase, putative	gene from Plasmodium falciparum	2.1e-56
BLAST match view associations BLAST with PEX1 PEX1 PEX1 Peroxisome biogenesis factor 1	protein from Homo sapiens	3.2e-56
BLAST match view associations BLAST with Pex6 Pex6 Pex6 peroxisomal biogenesis factor 6	protein from Mus musculus	3.3e-56
BLAST match view associations BLAST with SPATA5L1 SPATA5L1 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1	protein from Bos taurus	3.3e-56
BLAST match view associations BLAST with RVBD_0435c RVBD_0435c RVBD_0435c Transitional endoplasmic reticulum ATPase	protein from Mycobacterium tuberculosis H37Rv	4.8e-56
BLAST match view associations BLAST with PEX6 PEX6 PEX6 Peroxisome assembly factor 2	protein from Homo sapiens	9.0e-56