Query 007056
Match_columns 620
No_of_seqs 316 out of 2155
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:01:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hq1_A 2-isopropylmalate synth 100.0 4E-117 1E-121 991.5 53.3 511 75-601 70-643 (644)
2 3rmj_A 2-isopropylmalate synth 100.0 3.4E-95 1.2E-99 778.1 33.0 362 72-448 8-370 (370)
3 3ivs_A Homocitrate synthase, m 100.0 4.1E-94 1.4E-98 777.8 29.2 384 63-472 23-410 (423)
4 2ztj_A Homocitrate synthase; ( 100.0 8.4E-88 2.9E-92 725.4 29.2 370 75-471 2-375 (382)
5 3eeg_A 2-isopropylmalate synth 100.0 4.9E-81 1.7E-85 659.0 25.1 316 73-400 3-318 (325)
6 3ble_A Citramalate synthase fr 100.0 3.6E-77 1.2E-81 633.0 32.8 317 73-407 16-337 (337)
7 3ewb_X 2-isopropylmalate synth 100.0 2.5E-67 8.6E-72 547.3 31.3 284 74-369 3-286 (293)
8 1ydo_A HMG-COA lyase; TIM-barr 100.0 7.7E-61 2.6E-65 501.5 25.9 282 73-379 3-302 (307)
9 2cw6_A Hydroxymethylglutaryl-C 100.0 1.3E-58 4.4E-63 483.2 27.0 276 74-374 3-296 (298)
10 2ftp_A Hydroxymethylglutaryl-C 100.0 2.8E-58 9.6E-63 481.5 28.5 276 73-373 5-298 (302)
11 1rqb_A Transcarboxylase 5S sub 100.0 3.3E-56 1.1E-60 494.2 27.0 278 71-380 19-317 (539)
12 1ydn_A Hydroxymethylglutaryl-C 100.0 2E-55 6.7E-60 458.4 28.5 270 74-368 2-289 (295)
13 2nx9_A Oxaloacetate decarboxyl 100.0 1.2E-55 4.2E-60 483.6 26.9 311 73-455 4-337 (464)
14 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 5.6E-54 1.9E-58 456.8 25.1 275 74-388 6-295 (345)
15 3bg3_A Pyruvate carboxylase, m 100.0 1E-52 3.5E-57 480.5 23.5 316 69-454 95-445 (718)
16 3dxi_A Putative aldolase; TIM 100.0 4.5E-51 1.5E-55 428.8 17.8 270 76-390 2-288 (320)
17 2qf7_A Pyruvate carboxylase pr 100.0 8.6E-49 3E-53 471.4 23.5 306 69-450 543-882 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 1E-44 3.5E-49 435.2 26.9 259 69-364 525-815 (1150)
19 3f6g_B Alpha-isopropylmalate s 100.0 3.3E-28 1.1E-32 222.8 16.4 119 476-604 2-125 (127)
20 2ekc_A AQ_1548, tryptophan syn 98.8 5E-08 1.7E-12 99.5 14.6 177 95-307 28-231 (262)
21 3nav_A Tryptophan synthase alp 98.3 4.2E-06 1.4E-10 85.7 13.5 174 96-307 32-234 (271)
22 1qop_A Tryptophan synthase alp 98.1 9.5E-06 3.2E-10 82.7 11.5 178 94-307 27-231 (268)
23 3vnd_A TSA, tryptophan synthas 98.1 1.3E-05 4.4E-10 81.9 12.2 174 95-307 29-232 (267)
24 3t7v_A Methylornithine synthas 98.1 0.00026 8.9E-09 74.4 21.4 219 93-334 89-335 (350)
25 3f4w_A Putative hexulose 6 pho 97.8 9.3E-05 3.2E-09 72.0 10.2 175 94-307 9-184 (211)
26 1rd5_A Tryptophan synthase alp 97.6 0.00044 1.5E-08 69.8 12.2 168 95-308 29-228 (262)
27 3tha_A Tryptophan synthase alp 97.4 0.00034 1.1E-08 70.7 8.6 174 96-307 26-224 (252)
28 1r30_A Biotin synthase; SAM ra 97.2 0.049 1.7E-06 57.4 22.5 215 93-334 97-332 (369)
29 3iix_A Biotin synthetase, puta 96.8 0.056 1.9E-06 56.0 18.6 190 94-308 83-291 (348)
30 3ajx_A 3-hexulose-6-phosphate 96.7 0.033 1.1E-06 53.5 15.1 167 95-307 10-183 (207)
31 3lye_A Oxaloacetate acetyl hyd 95.9 0.4 1.4E-05 49.6 18.8 224 104-353 38-285 (307)
32 3qxb_A Putative xylose isomera 95.7 0.17 5.7E-06 51.6 15.0 202 102-335 39-278 (316)
33 3lmz_A Putative sugar isomeras 95.6 0.66 2.3E-05 45.5 18.5 195 75-335 18-224 (257)
34 1geq_A Tryptophan synthase alp 95.5 0.42 1.4E-05 47.1 16.6 168 94-308 15-218 (248)
35 2qw5_A Xylose isomerase-like T 95.5 0.32 1.1E-05 49.9 16.4 191 102-335 35-274 (335)
36 3fa4_A 2,3-dimethylmalate lyas 95.4 0.41 1.4E-05 49.3 16.5 207 104-334 31-261 (302)
37 3ngf_A AP endonuclease, family 95.4 0.075 2.6E-06 52.8 10.7 190 95-335 23-240 (269)
38 3tva_A Xylose isomerase domain 95.4 0.25 8.4E-06 49.4 14.6 197 103-335 26-252 (290)
39 4e38_A Keto-hydroxyglutarate-a 95.2 0.13 4.3E-06 51.2 11.3 153 95-306 43-198 (232)
40 3kws_A Putative sugar isomeras 95.1 1.7 5.7E-05 43.2 19.9 209 74-335 25-255 (287)
41 2qul_A D-tagatose 3-epimerase; 94.9 0.19 6.5E-06 50.0 11.9 207 77-335 4-239 (290)
42 2h9a_B CO dehydrogenase/acetyl 94.8 0.48 1.7E-05 49.0 15.1 140 77-255 51-211 (310)
43 3lab_A Putative KDPG (2-keto-3 94.8 0.16 5.6E-06 49.9 10.9 157 94-306 21-183 (217)
44 3tr9_A Dihydropteroate synthas 94.8 1.5 5.1E-05 45.4 18.6 183 94-308 45-272 (314)
45 2dqw_A Dihydropteroate synthas 94.8 0.89 3E-05 46.7 16.7 147 94-271 48-218 (294)
46 3oa3_A Aldolase; structural ge 94.6 3.6 0.00012 42.0 20.7 200 77-310 59-263 (288)
47 3qc0_A Sugar isomerase; TIM ba 94.6 0.85 2.9E-05 44.7 15.9 214 76-335 6-241 (275)
48 1h1y_A D-ribulose-5-phosphate 94.4 0.54 1.8E-05 46.0 13.7 164 100-307 21-198 (228)
49 2yci_X 5-methyltetrahydrofolat 94.3 1.1 3.9E-05 45.3 16.1 179 78-287 15-208 (271)
50 3ngj_A Deoxyribose-phosphate a 94.3 2.4 8.2E-05 42.2 18.0 196 78-310 29-229 (239)
51 1wa3_A 2-keto-3-deoxy-6-phosph 94.2 2.3 7.7E-05 40.4 17.5 157 95-308 19-176 (205)
52 1qtw_A Endonuclease IV; DNA re 94.2 2 7E-05 42.2 17.8 235 102-362 16-280 (285)
53 3vni_A Xylose isomerase domain 94.0 0.54 1.8E-05 46.9 12.9 194 95-335 17-238 (294)
54 2v82_A 2-dehydro-3-deoxy-6-pho 93.9 1.8 6.3E-05 41.4 16.1 158 95-308 16-174 (212)
55 3txv_A Probable tagatose 6-pho 93.9 1.1 3.9E-05 48.4 15.7 200 94-309 28-288 (450)
56 1h5y_A HISF; histidine biosynt 93.8 0.39 1.3E-05 46.8 11.4 215 78-333 7-247 (253)
57 3jr2_A Hexulose-6-phosphate sy 93.8 0.2 6.8E-06 48.8 9.1 166 95-307 16-191 (218)
58 1k77_A EC1530, hypothetical pr 93.8 0.58 2E-05 45.7 12.6 191 95-335 15-233 (260)
59 3p6l_A Sugar phosphate isomera 93.7 1.8 6.2E-05 42.3 16.1 200 76-335 11-228 (262)
60 1mxs_A KDPG aldolase; 2-keto-3 93.7 0.95 3.2E-05 44.6 13.8 154 96-308 36-193 (225)
61 2qjg_A Putative aldolase MJ040 93.7 2.1 7E-05 42.7 16.6 171 97-309 44-236 (273)
62 2q02_A Putative cytoplasmic pr 93.6 0.81 2.8E-05 44.9 13.4 201 95-335 19-238 (272)
63 2wqp_A Polysialic acid capsule 93.6 1.5 5.3E-05 45.9 15.9 177 95-311 32-237 (349)
64 1vhc_A Putative KHG/KDPG aldol 93.5 0.96 3.3E-05 44.5 13.6 154 95-307 26-183 (224)
65 1w8s_A FBP aldolase, fructose- 93.5 2.7 9.1E-05 42.2 17.1 175 96-307 39-228 (263)
66 3obe_A Sugar phosphate isomera 93.5 0.35 1.2E-05 49.2 10.7 205 75-335 21-271 (305)
67 1ujp_A Tryptophan synthase alp 93.4 0.24 8.2E-06 50.3 9.2 169 96-307 28-226 (271)
68 3u0h_A Xylose isomerase domain 93.3 0.13 4.4E-06 50.9 7.0 199 95-335 16-243 (281)
69 1vli_A Spore coat polysacchari 93.3 1.2 4.2E-05 47.3 14.7 98 205-311 149-249 (385)
70 1ub3_A Aldolase protein; schif 93.2 4.7 0.00016 39.5 17.8 187 92-309 13-204 (220)
71 2isw_A Putative fructose-1,6-b 92.9 5 0.00017 41.6 18.3 162 94-285 25-211 (323)
72 3m0z_A Putative aldolase; MCSG 92.9 2 6.7E-05 42.3 14.1 163 94-273 47-248 (249)
73 1vli_A Spore coat polysacchari 92.9 0.59 2E-05 49.7 11.5 139 104-272 127-279 (385)
74 1wbh_A KHG/KDPG aldolase; lyas 92.8 1.3 4.5E-05 43.2 13.1 155 95-307 25-182 (214)
75 3r12_A Deoxyribose-phosphate a 92.6 9.4 0.00032 38.3 19.6 197 77-310 44-245 (260)
76 2yw3_A 4-hydroxy-2-oxoglutarat 92.5 0.7 2.4E-05 44.8 10.7 151 97-308 24-177 (207)
77 2hk0_A D-psicose 3-epimerase; 92.4 2.6 9E-05 42.3 15.5 206 76-335 22-257 (309)
78 3q94_A Fructose-bisphosphate a 92.4 3.1 0.0001 42.5 15.6 191 87-308 19-234 (288)
79 1eye_A DHPS 1, dihydropteroate 92.3 9.8 0.00034 38.6 19.3 149 93-271 24-198 (280)
80 1xky_A Dihydrodipicolinate syn 92.1 12 0.0004 38.2 20.4 193 94-331 29-230 (301)
81 1tv8_A MOAA, molybdenum cofact 92.0 3 0.0001 42.8 15.5 137 93-246 48-190 (340)
82 3tak_A DHDPS, dihydrodipicolin 91.9 10 0.00036 38.3 19.2 194 94-332 18-220 (291)
83 3oa3_A Aldolase; structural ge 91.9 2 6.9E-05 43.9 13.5 149 158-331 72-226 (288)
84 1zco_A 2-dehydro-3-deoxyphosph 91.8 1.2 4E-05 44.9 11.7 111 149-272 132-258 (262)
85 1vr6_A Phospho-2-dehydro-3-deo 91.8 0.35 1.2E-05 50.9 8.0 111 149-271 215-340 (350)
86 3qze_A DHDPS, dihydrodipicolin 91.7 13 0.00045 38.1 22.8 194 94-332 40-242 (314)
87 3aal_A Probable endonuclease 4 91.7 6.3 0.00022 39.4 17.3 197 102-334 22-254 (303)
88 2y5s_A DHPS, dihydropteroate s 91.6 3 0.0001 42.7 14.7 194 78-309 27-271 (294)
89 1rpx_A Protein (ribulose-phosp 91.6 0.58 2E-05 45.6 9.0 169 99-310 24-207 (230)
90 2zvr_A Uncharacterized protein 91.5 4.2 0.00014 40.3 15.6 187 99-335 42-256 (290)
91 3flu_A DHDPS, dihydrodipicolin 91.5 13 0.00044 37.8 19.4 215 94-362 24-247 (297)
92 3l21_A DHDPS, dihydrodipicolin 91.4 0.87 3E-05 46.8 10.5 106 221-332 25-135 (304)
93 3noy_A 4-hydroxy-3-methylbut-2 91.4 4.6 0.00016 42.3 15.8 117 95-222 43-184 (366)
94 3qja_A IGPS, indole-3-glycerol 91.4 4 0.00014 41.2 15.1 164 99-307 73-239 (272)
95 1aj0_A DHPS, dihydropteroate s 91.3 3 0.0001 42.5 14.1 148 93-270 33-205 (282)
96 3r12_A Deoxyribose-phosphate a 91.2 3.6 0.00012 41.4 14.3 149 158-331 57-211 (260)
97 2vef_A Dihydropteroate synthas 91.0 6.5 0.00022 40.6 16.6 150 93-272 28-223 (314)
98 3cqj_A L-ribulose-5-phosphate 90.8 14 0.00046 36.6 20.9 209 71-335 13-255 (295)
99 3tak_A DHDPS, dihydrodipicolin 90.8 0.96 3.3E-05 46.1 10.0 102 225-332 16-121 (291)
100 3bdk_A D-mannonate dehydratase 90.7 1.5 5.1E-05 46.7 11.6 18 318-335 306-323 (386)
101 2e6f_A Dihydroorotate dehydrog 90.6 2.5 8.4E-05 43.1 13.0 146 149-309 95-272 (314)
102 1gvf_A Tagatose-bisphosphate a 90.5 9.2 0.00032 38.9 16.9 181 94-307 25-229 (286)
103 3flu_A DHDPS, dihydrodipicolin 90.5 1.1 3.8E-05 45.8 10.2 106 221-332 17-127 (297)
104 2vp8_A Dihydropteroate synthas 90.5 6.2 0.00021 40.8 15.8 161 77-270 45-237 (318)
105 2wkj_A N-acetylneuraminate lya 90.3 1.3 4.3E-05 45.6 10.4 105 221-331 21-130 (303)
106 3ndo_A Deoxyribose-phosphate a 90.2 7.5 0.00026 38.4 15.5 195 78-310 15-219 (231)
107 1bxb_A Xylose isomerase; xylos 90.0 2 6.8E-05 45.3 11.9 177 94-290 32-250 (387)
108 1xky_A Dihydrodipicolinate syn 90.0 1.3 4.5E-05 45.4 10.2 105 221-331 22-131 (301)
109 1rvg_A Fructose-1,6-bisphospha 89.9 15 0.0005 37.8 17.9 166 94-287 24-211 (305)
110 1yx1_A Hypothetical protein PA 89.9 0.56 1.9E-05 46.3 7.1 190 102-333 27-224 (264)
111 1n7k_A Deoxyribose-phosphate a 89.8 17 0.00056 35.9 18.2 180 93-309 31-220 (234)
112 3fkr_A L-2-keto-3-deoxyarabona 89.8 1.1 3.8E-05 46.1 9.5 104 225-331 23-130 (309)
113 3a5f_A Dihydrodipicolinate syn 89.7 1.3 4.5E-05 45.1 10.0 98 228-331 19-120 (291)
114 1to3_A Putative aldolase YIHT; 89.7 6.6 0.00022 40.3 15.3 133 160-308 112-252 (304)
115 3m6y_A 4-hydroxy-2-oxoglutarat 89.7 2.6 8.9E-05 41.9 11.4 163 94-273 69-271 (275)
116 2r8w_A AGR_C_1641P; APC7498, d 89.6 1.4 4.9E-05 45.8 10.3 105 221-331 44-153 (332)
117 3daq_A DHDPS, dihydrodipicolin 89.5 18 0.00062 36.6 18.3 195 94-332 19-222 (292)
118 2wqp_A Polysialic acid capsule 89.5 1.6 5.4E-05 45.9 10.4 148 94-271 87-266 (349)
119 3si9_A DHDPS, dihydrodipicolin 89.4 14 0.00047 38.0 17.5 195 94-332 39-242 (315)
120 3b4u_A Dihydrodipicolinate syn 89.4 1.8 6.2E-05 44.1 10.7 102 225-331 18-123 (294)
121 3daq_A DHDPS, dihydrodipicolin 89.3 1.2 4E-05 45.6 9.2 100 227-332 19-122 (292)
122 2vc6_A MOSA, dihydrodipicolina 89.3 18 0.00061 36.6 18.1 194 94-331 17-219 (292)
123 2x7v_A Probable endonuclease 4 89.3 17 0.00058 35.4 20.4 199 102-334 16-251 (287)
124 3eb2_A Putative dihydrodipicol 89.3 17 0.00056 37.0 17.9 194 94-332 21-223 (300)
125 3sz8_A 2-dehydro-3-deoxyphosph 89.2 1.6 5.4E-05 44.6 10.0 127 126-272 123-272 (285)
126 4dpp_A DHDPS 2, dihydrodipicol 89.2 1.7 5.8E-05 45.9 10.5 107 220-332 68-179 (360)
127 3cpr_A Dihydrodipicolinate syn 89.0 1.9 6.5E-05 44.2 10.6 105 221-331 26-135 (304)
128 3eoo_A Methylisocitrate lyase; 89.0 5.6 0.00019 40.8 13.9 108 194-307 66-188 (298)
129 3na8_A Putative dihydrodipicol 89.0 14 0.00048 37.9 17.2 194 94-331 41-243 (315)
130 3e96_A Dihydrodipicolinate syn 88.8 1.3 4.6E-05 45.6 9.4 106 221-332 21-131 (316)
131 3aam_A Endonuclease IV, endoiv 88.8 3.5 0.00012 40.4 12.1 191 101-334 17-239 (270)
132 2yxg_A DHDPS, dihydrodipicolin 88.7 1.8 6.1E-05 44.0 10.1 100 226-331 16-119 (289)
133 3glc_A Aldolase LSRF; TIM barr 88.7 8.4 0.00029 39.4 15.1 122 162-307 131-254 (295)
134 3nvt_A 3-deoxy-D-arabino-heptu 88.7 5.2 0.00018 42.5 13.9 176 96-310 154-348 (385)
135 1eye_A DHPS 1, dihydropteroate 88.7 1.4 4.7E-05 45.0 9.1 82 224-312 21-109 (280)
136 1f6k_A N-acetylneuraminate lya 88.5 2.1 7.1E-05 43.6 10.4 101 225-331 18-123 (293)
137 1rd5_A Tryptophan synthase alp 88.5 6.9 0.00024 38.7 14.1 114 205-334 7-143 (262)
138 2ehh_A DHDPS, dihydrodipicolin 88.4 1.7 5.8E-05 44.3 9.7 100 226-331 16-119 (294)
139 2ze3_A DFA0005; organic waste 88.4 5 0.00017 40.6 13.0 75 194-272 59-138 (275)
140 2ojp_A DHDPS, dihydrodipicolin 88.4 1.2 4E-05 45.5 8.4 102 225-332 16-121 (292)
141 3na8_A Putative dihydrodipicol 88.4 1.5 5.2E-05 45.2 9.4 106 221-332 34-144 (315)
142 3qfe_A Putative dihydrodipicol 88.3 1.3 4.3E-05 45.9 8.7 85 225-311 26-114 (318)
143 3dx5_A Uncharacterized protein 88.3 0.89 3E-05 45.1 7.4 213 95-333 15-246 (286)
144 2v9d_A YAGE; dihydrodipicolini 88.3 26 0.0009 36.3 22.9 198 94-332 48-254 (343)
145 1vs1_A 3-deoxy-7-phosphoheptul 88.3 1.6 5.6E-05 44.3 9.3 114 149-272 147-273 (276)
146 3q58_A N-acetylmannosamine-6-p 88.3 18 0.00061 35.4 16.7 159 96-308 34-208 (229)
147 3si9_A DHDPS, dihydrodipicolin 88.2 1.7 5.7E-05 44.9 9.6 105 221-331 32-141 (315)
148 1q7z_A 5-methyltetrahydrofolat 88.2 6.6 0.00022 43.8 15.0 157 80-271 322-497 (566)
149 3qze_A DHDPS, dihydrodipicolin 88.2 1.8 6.2E-05 44.6 9.8 106 221-332 33-143 (314)
150 3s5o_A 4-hydroxy-2-oxoglutarat 88.2 1.9 6.5E-05 44.3 10.0 104 225-332 29-136 (307)
151 3dz1_A Dihydrodipicolinate syn 88.2 2.5 8.5E-05 43.5 10.9 103 221-331 18-125 (313)
152 3nvt_A 3-deoxy-D-arabino-heptu 88.2 1.1 3.9E-05 47.6 8.5 157 95-273 190-378 (385)
153 4h3d_A 3-dehydroquinate dehydr 88.1 22 0.00077 35.4 18.3 224 75-332 6-252 (258)
154 3m5v_A DHDPS, dihydrodipicolin 88.0 25 0.00085 35.7 20.2 194 94-332 24-227 (301)
155 2p10_A MLL9387 protein; putati 87.9 5.3 0.00018 40.6 12.6 155 128-307 79-256 (286)
156 3igs_A N-acetylmannosamine-6-p 87.9 20 0.00068 35.1 16.8 158 96-308 34-208 (232)
157 1o5k_A DHDPS, dihydrodipicolin 87.8 1.9 6.5E-05 44.3 9.7 105 221-331 23-131 (306)
158 1tqj_A Ribulose-phosphate 3-ep 87.7 2 6.8E-05 42.2 9.4 185 99-332 18-219 (230)
159 1xg4_A Probable methylisocitra 87.7 4.4 0.00015 41.5 12.2 109 194-307 61-184 (295)
160 2vc6_A MOSA, dihydrodipicolina 87.6 1.6 5.5E-05 44.5 8.9 100 226-331 16-119 (292)
161 1tx2_A DHPS, dihydropteroate s 87.6 17 0.00059 37.1 16.6 199 77-309 43-275 (297)
162 1vr6_A Phospho-2-dehydro-3-deo 87.5 15 0.00052 38.4 16.4 178 95-312 117-314 (350)
163 1vzw_A Phosphoribosyl isomeras 87.5 2.5 8.5E-05 41.3 9.9 169 99-307 33-219 (244)
164 3eoo_A Methylisocitrate lyase; 87.4 3.6 0.00012 42.2 11.3 205 104-334 35-261 (298)
165 3d0c_A Dihydrodipicolinate syn 87.4 2.2 7.6E-05 44.0 9.9 101 225-331 27-130 (314)
166 1zco_A 2-dehydro-3-deoxyphosph 87.3 8.8 0.0003 38.5 14.0 176 94-311 33-230 (262)
167 3ih1_A Methylisocitrate lyase; 87.3 9.8 0.00034 39.1 14.5 106 194-307 72-192 (305)
168 2rfg_A Dihydrodipicolinate syn 87.2 1.8 6.1E-05 44.3 9.0 100 226-331 16-119 (297)
169 3h5d_A DHDPS, dihydrodipicolin 87.2 2 6.7E-05 44.3 9.3 105 221-331 17-127 (311)
170 4hb7_A Dihydropteroate synthas 87.2 18 0.00061 36.5 16.1 148 93-271 25-191 (270)
171 1i60_A IOLI protein; beta barr 87.2 6.7 0.00023 38.1 13.0 198 95-335 14-239 (278)
172 1aj0_A DHPS, dihydropteroate s 87.1 2.2 7.6E-05 43.4 9.5 79 224-311 30-118 (282)
173 2v9d_A YAGE; dihydrodipicolini 87.0 2.3 7.8E-05 44.5 9.8 90 221-312 41-135 (343)
174 2qiw_A PEP phosphonomutase; st 87.0 3.9 0.00013 41.0 11.1 73 193-272 62-139 (255)
175 2fli_A Ribulose-phosphate 3-ep 86.9 2.7 9.3E-05 40.2 9.7 172 97-310 15-198 (220)
176 3m47_A Orotidine 5'-phosphate 86.8 4.5 0.00015 39.6 11.3 170 95-307 22-199 (228)
177 2vp8_A Dihydropteroate synthas 86.6 1.9 6.5E-05 44.7 8.8 81 224-312 57-146 (318)
178 1zlp_A PSR132, petal death pro 86.6 4.7 0.00016 41.7 11.7 130 170-307 56-206 (318)
179 1s2w_A Phosphoenolpyruvate pho 86.6 10 0.00034 38.8 14.1 205 104-334 32-260 (295)
180 3g8r_A Probable spore coat pol 86.5 7.2 0.00025 40.9 13.2 141 104-272 104-255 (350)
181 1tx2_A DHPS, dihydropteroate s 86.5 2 6.9E-05 44.1 8.9 78 224-310 55-142 (297)
182 2hjp_A Phosphonopyruvate hydro 86.5 6.6 0.00022 40.1 12.6 108 194-307 58-183 (290)
183 3d0c_A Dihydrodipicolinate syn 86.3 19 0.00065 36.9 16.3 193 94-331 29-228 (314)
184 1o60_A 2-dehydro-3-deoxyphosph 86.3 2.3 7.9E-05 43.5 9.2 141 126-287 121-290 (292)
185 3eb2_A Putative dihydrodipicol 86.2 1.7 5.8E-05 44.5 8.2 101 225-331 19-123 (300)
186 3a5f_A Dihydrodipicolinate syn 86.1 25 0.00087 35.4 16.9 192 95-331 19-219 (291)
187 1jub_A Dihydroorotate dehydrog 86.0 4.2 0.00014 41.3 11.1 139 157-309 103-270 (311)
188 2ehh_A DHDPS, dihydrodipicolin 85.9 31 0.0011 34.8 20.3 193 95-331 18-219 (294)
189 1p1x_A Deoxyribose-phosphate a 85.9 27 0.00092 35.0 16.6 161 93-272 23-193 (260)
190 3qfe_A Putative dihydrodipicol 85.9 34 0.0011 35.1 18.7 196 94-332 28-235 (318)
191 1vyr_A Pentaerythritol tetrani 85.8 5.5 0.00019 41.8 12.1 129 168-307 169-320 (364)
192 2qiw_A PEP phosphonomutase; st 85.6 6.7 0.00023 39.2 12.0 177 103-308 32-234 (255)
193 1qwg_A PSL synthase;, (2R)-pho 85.5 3.3 0.00011 41.3 9.5 154 95-269 23-197 (251)
194 3gg8_A Pyruvate kinase; malari 85.5 25 0.00084 38.7 17.2 159 94-272 204-369 (511)
195 2ze3_A DFA0005; organic waste 85.4 16 0.00055 36.9 14.8 201 104-333 29-253 (275)
196 3gr7_A NADPH dehydrogenase; fl 85.4 6.8 0.00023 40.7 12.5 132 169-307 153-304 (340)
197 2a4a_A Deoxyribose-phosphate a 85.4 23 0.00077 36.0 15.8 219 78-324 34-273 (281)
198 3fs2_A 2-dehydro-3-deoxyphosph 85.1 1.7 5.7E-05 44.7 7.4 126 126-271 144-290 (298)
199 3q58_A N-acetylmannosamine-6-p 84.9 3.2 0.00011 40.8 9.2 67 237-314 94-160 (229)
200 3ayv_A Putative uncharacterize 84.8 2.5 8.4E-05 41.1 8.3 135 99-240 11-153 (254)
201 1oy0_A Ketopantoate hydroxymet 84.7 9.1 0.00031 38.9 12.5 139 101-274 44-214 (281)
202 2qkf_A 3-deoxy-D-manno-octulos 84.6 3 0.0001 42.4 9.0 126 126-271 118-266 (280)
203 2gou_A Oxidoreductase, FMN-bin 84.6 6.9 0.00024 41.1 12.1 129 168-307 169-319 (365)
204 3ovp_A Ribulose-phosphate 3-ep 84.5 4.4 0.00015 39.7 10.0 162 101-307 20-194 (228)
205 3hgj_A Chromate reductase; TIM 84.5 8.8 0.0003 39.9 12.8 133 168-307 160-315 (349)
206 1xim_A D-xylose isomerase; iso 84.4 2.6 8.7E-05 44.5 8.8 175 94-289 32-249 (393)
207 3s5o_A 4-hydroxy-2-oxoglutarat 84.2 39 0.0013 34.4 20.5 197 94-332 31-236 (307)
208 3tsm_A IGPS, indole-3-glycerol 84.1 12 0.0004 37.8 13.1 156 100-307 81-246 (272)
209 3vnd_A TSA, tryptophan synthas 84.1 12 0.00039 37.8 13.0 99 161-272 33-147 (267)
210 1tz9_A Mannonate dehydratase; 84.1 42 0.0014 34.6 19.0 115 197-335 194-320 (367)
211 3m5v_A DHDPS, dihydrodipicolin 84.0 3.8 0.00013 41.9 9.6 103 225-332 22-128 (301)
212 3n9r_A Fructose-bisphosphate a 83.9 9.3 0.00032 39.3 12.4 188 94-307 24-252 (307)
213 3igs_A N-acetylmannosamine-6-p 83.9 3.8 0.00013 40.3 9.2 67 237-314 94-160 (232)
214 3ctl_A D-allulose-6-phosphate 83.8 4 0.00014 40.2 9.3 159 104-307 19-192 (231)
215 2ekc_A AQ_1548, tryptophan syn 83.8 36 0.0012 33.7 16.7 96 164-272 35-146 (262)
216 1o66_A 3-methyl-2-oxobutanoate 83.6 20 0.00068 36.3 14.4 137 102-274 28-196 (275)
217 2r14_A Morphinone reductase; H 83.5 5.1 0.00017 42.3 10.6 131 169-307 175-325 (377)
218 3g8r_A Probable spore coat pol 83.3 11 0.00038 39.5 12.8 96 206-311 127-226 (350)
219 2r8w_A AGR_C_1641P; APC7498, d 83.1 42 0.0014 34.6 17.3 195 94-331 51-256 (332)
220 3ih1_A Methylisocitrate lyase; 83.0 12 0.0004 38.6 12.6 202 103-334 41-265 (305)
221 3l6u_A ABC-type sugar transpor 82.9 7.2 0.00024 38.1 10.9 199 94-315 21-228 (293)
222 1ka9_F Imidazole glycerol phos 82.7 11 0.00038 36.7 12.1 194 98-332 31-244 (252)
223 2a4a_A Deoxyribose-phosphate a 82.7 16 0.00056 37.0 13.5 102 227-331 102-210 (281)
224 3dz1_A Dihydrodipicolinate syn 82.7 13 0.00043 38.2 12.9 96 167-273 36-131 (313)
225 3mcm_A 2-amino-4-hydroxy-6-hyd 82.6 8.1 0.00028 41.8 11.8 128 95-245 209-358 (442)
226 1f6y_A 5-methyltetrahydrofolat 82.5 42 0.0014 33.5 17.0 171 84-287 15-199 (262)
227 3lmz_A Putative sugar isomeras 82.5 8.2 0.00028 37.5 11.1 106 160-287 30-135 (257)
228 3h5d_A DHDPS, dihydrodipicolin 82.3 46 0.0016 33.9 17.1 193 94-332 24-226 (311)
229 3tdn_A FLR symmetric alpha-bet 82.3 2 6.7E-05 42.3 6.4 68 99-179 36-107 (247)
230 1o5k_A DHDPS, dihydrodipicolin 82.3 46 0.0016 33.8 22.6 197 95-332 30-235 (306)
231 1xi3_A Thiamine phosphate pyro 82.2 19 0.00064 33.9 13.2 158 99-310 27-190 (215)
232 2y88_A Phosphoribosyl isomeras 82.2 3.1 0.0001 40.5 7.8 170 99-307 32-222 (244)
233 3b8i_A PA4872 oxaloacetate dec 82.0 12 0.00042 38.0 12.3 108 194-307 65-185 (287)
234 3k13_A 5-methyltetrahydrofolat 81.9 42 0.0014 34.3 16.3 200 79-306 18-250 (300)
235 3l49_A ABC sugar (ribose) tran 81.9 15 0.0005 35.8 12.7 199 94-315 18-224 (291)
236 1vs1_A 3-deoxy-7-phosphoheptul 81.8 39 0.0013 34.0 16.0 176 96-311 50-245 (276)
237 1z41_A YQJM, probable NADH-dep 81.8 18 0.00061 37.4 13.8 135 165-307 149-304 (338)
238 3r2g_A Inosine 5'-monophosphat 81.7 3.6 0.00012 43.4 8.4 72 231-312 99-171 (361)
239 3m9w_A D-xylose-binding peripl 81.5 21 0.00072 35.2 13.9 203 93-315 14-222 (313)
240 2yx0_A Radical SAM enzyme; pre 81.4 31 0.0011 35.2 15.5 105 166-275 185-308 (342)
241 3hqn_D Pyruvate kinase, PK; TI 81.4 66 0.0023 35.2 18.5 158 94-272 189-353 (499)
242 1mzh_A Deoxyribose-phosphate a 81.2 41 0.0014 32.5 19.3 180 94-307 16-201 (225)
243 2tps_A Protein (thiamin phosph 81.1 16 0.00056 34.7 12.5 158 100-310 33-200 (227)
244 2rfg_A Dihydrodipicolinate syn 80.8 51 0.0017 33.3 18.5 193 94-331 17-218 (297)
245 4eiv_A Deoxyribose-phosphate a 80.7 22 0.00076 36.2 13.5 108 221-332 91-205 (297)
246 3pm6_A Putative fructose-bisph 80.6 54 0.0019 33.6 17.4 196 85-308 23-249 (306)
247 3b0p_A TRNA-dihydrouridine syn 80.6 35 0.0012 35.4 15.6 138 158-307 68-222 (350)
248 3o1n_A 3-dehydroquinate dehydr 80.5 51 0.0017 33.1 21.4 224 76-332 27-272 (276)
249 3b8i_A PA4872 oxaloacetate dec 80.4 3.4 0.00012 42.2 7.5 181 104-311 34-235 (287)
250 3eol_A Isocitrate lyase; seatt 80.1 44 0.0015 35.9 16.3 202 161-380 161-405 (433)
251 3p6l_A Sugar phosphate isomera 80.1 13 0.00044 36.1 11.5 113 160-288 22-138 (262)
252 3ngj_A Deoxyribose-phosphate a 80.1 29 0.00098 34.3 13.9 93 236-332 100-196 (239)
253 2w6r_A Imidazole glycerol phos 80.0 10 0.00035 37.3 10.8 196 99-332 31-248 (266)
254 3gnh_A L-lysine, L-arginine ca 79.9 5.6 0.00019 41.0 9.2 71 228-308 164-245 (403)
255 1f76_A Dihydroorotate dehydrog 79.6 57 0.0019 33.2 18.8 76 228-308 222-316 (336)
256 3lye_A Oxaloacetate acetyl hyd 79.4 11 0.00038 38.7 11.0 110 194-307 69-195 (307)
257 2ojp_A DHDPS, dihydrodipicolin 79.3 56 0.0019 32.9 20.7 194 94-332 18-220 (292)
258 1thf_D HISF protein; thermophI 79.2 13 0.00045 36.1 11.2 195 98-333 30-244 (253)
259 3fa4_A 2,3-dimethylmalate lyas 79.1 5 0.00017 41.2 8.3 109 194-307 62-187 (302)
260 1vcv_A Probable deoxyribose-ph 79.0 21 0.0007 35.1 12.4 156 77-251 51-220 (226)
261 3khd_A Pyruvate kinase; malari 78.8 29 0.00098 38.2 14.6 159 94-272 213-378 (520)
262 2x7v_A Probable endonuclease 4 78.7 32 0.0011 33.4 14.0 122 161-288 13-148 (287)
263 1vcv_A Probable deoxyribose-ph 78.7 51 0.0018 32.2 19.8 188 93-310 12-220 (226)
264 1zlp_A PSR132, petal death pro 78.6 13 0.00043 38.5 11.2 205 104-334 52-279 (318)
265 3elf_A Fructose-bisphosphate a 78.5 34 0.0011 35.8 14.4 163 201-372 7-250 (349)
266 2nuw_A 2-keto-3-deoxygluconate 78.4 8 0.00027 39.2 9.6 100 225-331 14-116 (288)
267 2r91_A 2-keto-3-deoxy-(6-phosp 78.0 11 0.00039 38.0 10.6 99 226-331 14-115 (286)
268 1o66_A 3-methyl-2-oxobutanoate 78.0 16 0.00053 37.0 11.4 99 169-285 33-138 (275)
269 1gte_A Dihydropyrimidine dehyd 77.9 25 0.00087 41.8 15.1 141 157-309 645-815 (1025)
270 3cny_A Inositol catabolism pro 77.7 51 0.0017 32.2 15.3 211 92-335 28-266 (301)
271 2yxg_A DHDPS, dihydrodipicolin 77.7 61 0.0021 32.5 19.8 192 94-331 17-217 (289)
272 1yxy_A Putative N-acetylmannos 77.5 16 0.00055 35.2 11.2 72 235-315 92-165 (234)
273 3noy_A 4-hydroxy-3-methylbut-2 77.3 7.4 0.00025 40.8 8.9 89 226-334 41-133 (366)
274 1w3i_A EDA, 2-keto-3-deoxy glu 77.2 8.2 0.00028 39.2 9.3 100 225-331 14-116 (293)
275 1vyr_A Pentaerythritol tetrani 77.2 17 0.00057 38.1 11.9 80 231-313 161-274 (364)
276 4djd_D C/Fe-SP, corrinoid/iron 77.1 14 0.00049 38.1 11.1 136 99-271 81-236 (323)
277 3cpr_A Dihydrodipicolinate syn 77.1 66 0.0023 32.6 20.4 191 94-331 33-232 (304)
278 1qwg_A PSL synthase;, (2R)-pho 77.0 12 0.00039 37.5 9.9 140 174-331 39-195 (251)
279 3ndo_A Deoxyribose-phosphate a 77.0 33 0.0011 33.7 13.2 102 228-332 77-186 (231)
280 2pgw_A Muconate cycloisomerase 76.8 13 0.00044 39.0 11.0 99 94-222 200-299 (384)
281 1m3u_A 3-methyl-2-oxobutanoate 76.7 18 0.00061 36.4 11.3 137 102-274 28-196 (264)
282 3rys_A Adenosine deaminase 1; 76.5 17 0.00058 37.8 11.6 125 172-308 93-222 (343)
283 3gr4_A Pyruvate kinase isozyme 76.3 79 0.0027 35.0 17.3 158 94-272 239-403 (550)
284 3aty_A Tcoye, prostaglandin F2 76.2 20 0.00067 37.8 12.2 131 165-307 179-333 (379)
285 2qgq_A Protein TM_1862; alpha- 76.2 42 0.0014 33.7 14.4 143 93-249 31-189 (304)
286 4ay7_A Methylcobalamin\: coenz 75.9 4.4 0.00015 42.0 7.0 71 231-308 190-267 (348)
287 3inp_A D-ribulose-phosphate 3- 75.7 3.1 0.00011 41.5 5.5 163 102-307 44-220 (246)
288 3fkr_A L-2-keto-3-deoxyarabona 75.7 31 0.001 35.2 13.2 41 203-243 92-135 (309)
289 1r30_A Biotin synthase; SAM ra 75.6 16 0.00056 37.8 11.4 67 194-267 99-167 (369)
290 4ab4_A Xenobiotic reductase B; 75.5 13 0.00045 39.0 10.5 125 169-307 162-305 (362)
291 4drs_A Pyruvate kinase; glycol 75.5 1E+02 0.0035 33.9 19.3 166 94-272 212-384 (526)
292 3b4u_A Dihydrodipicolinate syn 75.5 71 0.0024 32.1 20.7 193 94-328 20-223 (294)
293 3zwt_A Dihydroorotate dehydrog 75.3 39 0.0013 35.4 14.1 140 159-310 163-327 (367)
294 2wkj_A N-acetylneuraminate lya 75.2 74 0.0025 32.2 17.2 193 94-331 28-229 (303)
295 1xm3_A Thiazole biosynthesis p 75.1 9.3 0.00032 38.1 8.9 166 104-308 29-205 (264)
296 1nvm_A HOA, 4-hydroxy-2-oxoval 75.1 22 0.00075 36.8 12.1 42 176-221 8-50 (345)
297 1p1x_A Deoxyribose-phosphate a 75.0 55 0.0019 32.7 14.5 103 227-332 81-189 (260)
298 3l21_A DHDPS, dihydrodipicolin 75.0 75 0.0026 32.2 19.8 191 94-331 32-231 (304)
299 3vav_A 3-methyl-2-oxobutanoate 74.9 30 0.001 35.0 12.5 136 102-273 40-207 (275)
300 3kjx_A Transcriptional regulat 74.8 34 0.0012 34.3 13.3 198 94-315 81-283 (344)
301 2h3h_A Sugar ABC transporter, 74.4 63 0.0022 31.7 15.0 198 95-315 14-216 (313)
302 2j6v_A UV endonuclease, UVDE; 74.1 36 0.0012 34.6 13.2 107 197-310 138-254 (301)
303 2r91_A 2-keto-3-deoxy-(6-phosp 74.0 30 0.001 34.8 12.4 95 166-273 25-121 (286)
304 3q94_A Fructose-bisphosphate a 73.9 13 0.00045 37.8 9.7 102 204-316 10-118 (288)
305 2zad_A Muconate cycloisomerase 73.8 25 0.00086 36.1 12.1 98 94-222 192-292 (345)
306 2vef_A Dihydropteroate synthas 73.8 9.1 0.00031 39.5 8.6 79 224-311 25-113 (314)
307 3g1w_A Sugar ABC transporter; 73.6 47 0.0016 32.3 13.7 202 94-315 17-221 (305)
308 3obe_A Sugar phosphate isomera 73.5 16 0.00056 36.6 10.4 127 160-288 36-173 (305)
309 1xg4_A Probable methylisocitra 73.4 18 0.00062 36.9 10.6 206 104-334 30-257 (295)
310 3gd6_A Muconate cycloisomerase 73.2 82 0.0028 33.0 16.2 165 95-297 141-308 (391)
311 3n9r_A Fructose-bisphosphate a 73.2 12 0.00042 38.4 9.3 119 203-334 5-128 (307)
312 3i4k_A Muconate lactonizing en 73.0 20 0.0007 37.5 11.3 119 92-239 202-320 (383)
313 2y5s_A DHPS, dihydropteroate s 72.9 8.4 0.00029 39.4 7.9 81 224-311 38-125 (294)
314 4ef8_A Dihydroorotate dehydrog 72.8 71 0.0024 33.3 15.3 190 101-310 61-306 (354)
315 1icp_A OPR1, 12-oxophytodienoa 72.8 14 0.00047 39.0 9.9 134 166-307 173-327 (376)
316 3l5l_A Xenobiotic reductase A; 72.7 15 0.00052 38.4 10.2 131 169-307 167-322 (363)
317 2ovl_A Putative racemase; stru 72.7 16 0.00055 38.0 10.4 99 94-222 201-300 (371)
318 3l23_A Sugar phosphate isomera 72.6 19 0.00064 36.1 10.6 116 161-287 30-168 (303)
319 1dos_A Aldolase class II; lyas 72.6 97 0.0033 32.4 20.9 198 85-307 25-285 (358)
320 2c6q_A GMP reductase 2; TIM ba 72.4 10 0.00036 39.5 8.8 69 235-312 121-191 (351)
321 1q6o_A Humps, 3-keto-L-gulonat 72.3 47 0.0016 31.6 12.9 166 96-307 14-188 (216)
322 2nwr_A 2-dehydro-3-deoxyphosph 72.2 15 0.0005 37.0 9.5 112 149-271 120-252 (267)
323 1olt_A Oxygen-independent copr 72.1 9.5 0.00033 41.1 8.7 84 165-250 155-239 (457)
324 3rot_A ABC sugar transporter, 72.1 38 0.0013 33.1 12.6 259 94-386 16-287 (297)
325 1mxs_A KDPG aldolase; 2-keto-3 72.1 19 0.00066 35.1 10.1 86 205-308 18-103 (225)
326 2nx9_A Oxaloacetate decarboxyl 71.9 1.1E+02 0.0039 32.9 17.1 139 160-308 30-176 (464)
327 1ps9_A 2,4-dienoyl-COA reducta 71.9 21 0.00071 40.2 11.8 133 167-307 148-307 (671)
328 3gka_A N-ethylmaleimide reduct 71.7 15 0.00051 38.6 9.8 126 168-307 169-313 (361)
329 1s2w_A Phosphoenolpyruvate pho 71.4 66 0.0023 32.6 14.3 108 194-307 62-187 (295)
330 3i65_A Dihydroorotate dehydrog 71.3 62 0.0021 34.5 14.6 84 218-310 274-374 (415)
331 1mzh_A Deoxyribose-phosphate a 71.3 65 0.0022 31.1 13.8 81 230-311 69-153 (225)
332 4fxs_A Inosine-5'-monophosphat 71.3 63 0.0021 35.2 15.1 131 99-251 231-363 (496)
333 2hmc_A AGR_L_411P, dihydrodipi 71.0 84 0.0029 32.5 15.3 195 94-331 43-246 (344)
334 1rvk_A Isomerase/lactonizing e 71.0 37 0.0013 35.3 12.8 98 94-221 210-309 (382)
335 1tjy_A Sugar transport protein 71.0 84 0.0029 31.0 15.6 200 95-315 17-222 (316)
336 3e96_A Dihydrodipicolinate syn 71.0 69 0.0024 32.6 14.5 195 94-332 29-229 (316)
337 1u83_A Phosphosulfolactate syn 70.9 8.5 0.00029 38.9 7.3 117 203-326 82-213 (276)
338 2r8c_A Putative amidohydrolase 70.9 11 0.00038 39.3 8.7 70 229-308 173-253 (426)
339 2fvy_A D-galactose-binding per 70.9 79 0.0027 30.6 14.6 197 94-315 15-236 (309)
340 1ep3_A Dihydroorotate dehydrog 70.8 9.3 0.00032 38.5 7.8 78 229-311 109-197 (311)
341 3kws_A Putative sugar isomeras 70.7 30 0.001 33.8 11.5 114 160-289 38-170 (287)
342 1q7z_A 5-methyltetrahydrofolat 70.7 1.3E+02 0.0046 33.2 22.6 231 95-359 119-403 (566)
343 2g0w_A LMO2234 protein; putati 70.6 53 0.0018 32.4 13.4 211 74-335 22-252 (296)
344 2hsa_B 12-oxophytodienoate red 70.4 56 0.0019 34.6 14.1 133 167-307 178-345 (402)
345 3i4e_A Isocitrate lyase; struc 70.2 29 0.001 37.3 11.7 199 161-378 168-408 (439)
346 2p10_A MLL9387 protein; putati 69.9 69 0.0024 32.5 13.7 148 104-271 114-280 (286)
347 3q45_A Mandelate racemase/muco 69.8 1.1E+02 0.0037 31.7 17.8 167 95-297 139-305 (368)
348 4fo4_A Inosine 5'-monophosphat 69.7 15 0.00052 38.6 9.3 68 233-309 109-176 (366)
349 3cqj_A L-ribulose-5-phosphate 69.7 86 0.0029 30.6 15.7 123 160-288 30-170 (295)
350 3qtg_A Pyruvate kinase, PK; TI 69.7 1.3E+02 0.0044 32.6 19.3 197 94-313 178-384 (461)
351 3nav_A Tryptophan synthase alp 69.6 61 0.0021 32.5 13.4 122 202-334 6-150 (271)
352 1gvf_A Tagatose-bisphosphate a 69.3 22 0.00074 36.2 10.0 101 204-315 7-111 (286)
353 3o1i_D Periplasmic protein TOR 69.1 20 0.00068 34.9 9.7 196 94-314 18-226 (304)
354 2zds_A Putative DNA-binding pr 69.0 20 0.00068 36.0 9.9 150 162-335 113-288 (340)
355 3pao_A Adenosine deaminase; st 68.9 17 0.00059 37.5 9.4 108 190-307 105-218 (326)
356 4hb7_A Dihydropteroate synthas 68.7 20 0.0007 36.1 9.5 83 224-313 22-111 (270)
357 1vrd_A Inosine-5'-monophosphat 68.6 12 0.0004 40.8 8.5 72 233-313 238-309 (494)
358 3tml_A 2-dehydro-3-deoxyphosph 68.5 3.7 0.00013 42.0 4.1 113 149-272 133-273 (288)
359 1y0e_A Putative N-acetylmannos 68.4 14 0.00049 35.1 8.2 69 237-314 81-150 (223)
360 4h1z_A Enolase Q92ZS5; dehydra 68.3 1.2E+02 0.0041 31.9 16.2 165 96-297 188-352 (412)
361 3iwp_A Copper homeostasis prot 68.0 40 0.0014 34.2 11.6 170 104-312 52-240 (287)
362 3ixl_A Amdase, arylmalonate de 68.0 42 0.0014 32.8 11.7 122 101-254 56-190 (240)
363 3iix_A Biotin synthetase, puta 68.0 46 0.0016 33.7 12.5 63 194-264 84-147 (348)
364 4avf_A Inosine-5'-monophosphat 67.8 50 0.0017 35.9 13.3 131 99-251 229-361 (490)
365 1wa3_A 2-keto-3-deoxy-6-phosph 67.5 7.9 0.00027 36.5 6.1 69 228-307 19-87 (205)
366 3t05_A Pyruvate kinase, PK; te 67.5 1.6E+02 0.0056 32.9 18.4 158 94-272 190-354 (606)
367 2dri_A D-ribose-binding protei 67.4 56 0.0019 31.3 12.5 198 94-315 14-215 (271)
368 2nuw_A 2-keto-3-deoxygluconate 67.4 29 0.001 34.9 10.7 46 228-273 75-122 (288)
369 3lg3_A Isocitrate lyase; conse 67.4 37 0.0013 36.5 11.7 54 218-272 155-220 (435)
370 3e3m_A Transcriptional regulat 67.4 1.1E+02 0.0036 30.8 17.0 195 95-315 84-286 (355)
371 1eep_A Inosine 5'-monophosphat 67.3 12 0.00041 39.6 8.1 68 234-311 155-223 (404)
372 3usb_A Inosine-5'-monophosphat 67.0 28 0.00096 38.1 11.2 72 233-316 257-328 (511)
373 2hmc_A AGR_L_411P, dihydrodipi 66.9 14 0.00049 38.4 8.4 103 221-331 36-143 (344)
374 3khj_A Inosine-5-monophosphate 66.8 55 0.0019 34.1 12.9 67 234-310 107-173 (361)
375 1f6y_A 5-methyltetrahydrofolat 66.8 19 0.00065 36.0 8.9 92 228-334 22-116 (262)
376 3ktc_A Xylose isomerase; putat 66.7 1.1E+02 0.0038 30.7 18.6 200 94-335 32-264 (333)
377 1ub3_A Aldolase protein; schif 66.7 61 0.0021 31.4 12.4 100 228-331 68-171 (220)
378 1nu5_A Chloromuconate cycloiso 66.4 25 0.00084 36.5 10.2 106 92-226 196-301 (370)
379 1ypf_A GMP reductase; GUAC, pu 66.2 40 0.0014 34.6 11.7 92 206-312 86-179 (336)
380 1twd_A Copper homeostasis prot 66.0 40 0.0014 33.6 11.0 156 84-274 60-247 (256)
381 3iar_A Adenosine deaminase; pu 65.8 34 0.0012 35.8 11.1 105 193-307 120-233 (367)
382 2zvr_A Uncharacterized protein 65.7 30 0.001 34.0 10.2 112 159-288 40-173 (290)
383 2qgy_A Enolase from the enviro 65.7 12 0.00042 39.3 7.7 103 92-223 202-304 (391)
384 4avf_A Inosine-5'-monophosphat 65.4 17 0.0006 39.6 9.0 67 234-309 231-297 (490)
385 2qde_A Mandelate racemase/muco 65.3 24 0.00081 37.2 9.8 100 93-222 198-298 (397)
386 3q45_A Mandelate racemase/muco 65.3 22 0.00077 37.0 9.6 102 93-223 193-294 (368)
387 2r14_A Morphinone reductase; H 65.3 47 0.0016 34.8 12.1 80 231-311 166-276 (377)
388 1ps9_A 2,4-dienoyl-COA reducta 64.9 21 0.00071 40.2 9.9 21 412-434 376-398 (671)
389 3jva_A Dipeptide epimerase; en 64.9 21 0.00072 37.0 9.2 106 92-226 191-297 (354)
390 2dqw_A Dihydropteroate synthas 64.8 7.8 0.00027 39.6 5.7 80 224-310 44-130 (294)
391 1icp_A OPR1, 12-oxophytodienoa 64.7 27 0.00093 36.6 10.1 81 231-312 167-278 (376)
392 4gxw_A Adenosine deaminase; am 64.3 91 0.0031 32.7 14.1 160 158-333 90-258 (380)
393 1xm3_A Thiazole biosynthesis p 63.9 13 0.00043 37.2 7.0 130 159-313 22-156 (264)
394 3l23_A Sugar phosphate isomera 63.8 22 0.00077 35.5 9.0 125 73-216 11-159 (303)
395 2gou_A Oxidoreductase, FMN-bin 63.7 32 0.0011 36.0 10.4 79 231-312 161-272 (365)
396 1mdl_A Mandelate racemase; iso 63.6 14 0.00049 38.1 7.7 102 92-222 197-298 (359)
397 3feq_A Putative amidohydrolase 63.3 18 0.00061 37.3 8.4 71 228-308 169-250 (423)
398 3tva_A Xylose isomerase domain 63.2 29 0.00099 34.0 9.6 114 159-286 20-160 (290)
399 1xla_A D-xylose isomerase; iso 63.2 69 0.0024 33.4 13.0 141 162-333 118-277 (394)
400 1r3s_A URO-D, uroporphyrinogen 63.2 88 0.003 32.3 13.7 72 101-179 200-282 (367)
401 3vav_A 3-methyl-2-oxobutanoate 63.1 20 0.0007 36.2 8.3 100 169-286 45-150 (275)
402 3cyv_A URO-D, UPD, uroporphyri 62.9 28 0.00095 35.9 9.7 86 233-330 189-282 (354)
403 3qc0_A Sugar isomerase; TIM ba 62.7 44 0.0015 32.1 10.7 113 160-288 18-146 (275)
404 2g0w_A LMO2234 protein; putati 62.7 1.2E+02 0.0041 29.7 15.2 115 160-287 36-157 (296)
405 2isw_A Putative fructose-1,6-b 62.6 33 0.0011 35.4 10.0 103 203-315 6-112 (323)
406 3dg3_A Muconate cycloisomerase 62.5 25 0.00087 36.5 9.4 105 92-226 193-297 (367)
407 3aal_A Probable endonuclease 4 62.5 1.1E+02 0.0038 30.0 13.9 123 161-289 19-154 (303)
408 2hjp_A Phosphonopyruvate hydro 62.4 95 0.0032 31.4 13.3 205 104-334 28-257 (290)
409 3qm3_A Fructose-bisphosphate a 62.4 1.5E+02 0.0053 30.9 18.7 200 86-307 29-284 (357)
410 2rdx_A Mandelate racemase/muco 62.4 26 0.00088 36.6 9.4 103 92-226 197-299 (379)
411 1tkk_A Similar to chloromucona 62.1 36 0.0012 35.1 10.4 106 92-226 193-300 (366)
412 3kke_A LACI family transcripti 62.1 52 0.0018 32.2 11.3 200 93-315 27-233 (303)
413 1oy0_A Ketopantoate hydroxymet 61.4 35 0.0012 34.6 9.7 92 168-272 49-148 (281)
414 3kru_A NADH:flavin oxidoreduct 61.1 39 0.0013 35.1 10.4 131 169-307 152-304 (343)
415 1lt8_A Betaine-homocysteine me 60.8 1.4E+02 0.0049 31.6 14.9 199 166-406 145-362 (406)
416 3dbi_A Sugar-binding transcrip 60.8 1.3E+02 0.0045 29.7 14.2 202 93-315 75-278 (338)
417 3dgb_A Muconate cycloisomerase 60.8 34 0.0012 35.8 10.0 106 92-226 202-307 (382)
418 2rjo_A Twin-arginine transloca 60.7 1.3E+02 0.0044 29.7 14.1 201 94-315 18-231 (332)
419 2bmb_A Folic acid synthesis pr 60.7 34 0.0012 37.9 10.2 84 224-312 240-340 (545)
420 2inf_A URO-D, UPD, uroporphyri 60.6 14 0.00047 38.3 6.9 73 232-309 194-271 (359)
421 1y0e_A Putative N-acetylmannos 60.6 1.1E+02 0.0038 28.7 21.5 174 79-308 8-202 (223)
422 1muw_A Xylose isomerase; atomi 60.5 72 0.0025 33.0 12.5 142 96-253 34-217 (386)
423 3stp_A Galactonate dehydratase 60.4 20 0.00067 38.2 8.1 102 92-222 238-339 (412)
424 1j93_A UROD, uroporphyrinogen 60.4 56 0.0019 33.5 11.5 69 102-179 197-273 (353)
425 3mcm_A 2-amino-4-hydroxy-6-hyd 60.0 21 0.00073 38.5 8.3 80 224-309 206-298 (442)
426 2bdq_A Copper homeostasis prot 59.6 78 0.0027 30.9 11.5 136 84-250 63-206 (224)
427 2z6i_A Trans-2-enoyl-ACP reduc 59.6 1.4E+02 0.0046 30.4 14.2 160 101-310 26-191 (332)
428 3ksm_A ABC-type sugar transpor 59.6 82 0.0028 29.8 11.9 201 94-315 13-221 (276)
429 3lab_A Putative KDPG (2-keto-3 59.5 21 0.00071 34.9 7.4 68 228-307 22-89 (217)
430 3dx5_A Uncharacterized protein 59.5 1.3E+02 0.0044 29.0 14.5 120 160-287 15-145 (286)
431 4fo4_A Inosine 5'-monophosphat 59.5 1.7E+02 0.0059 30.5 16.3 127 101-251 110-240 (366)
432 2xed_A Putative maleate isomer 59.4 1.4E+02 0.0048 29.5 13.9 144 77-254 55-218 (273)
433 1r3s_A URO-D, uroporphyrinogen 59.3 13 0.00043 38.8 6.3 87 232-330 198-295 (367)
434 1h5y_A HISF; histidine biosynt 59.3 36 0.0012 32.5 9.3 70 233-309 35-105 (253)
435 3eol_A Isocitrate lyase; seatt 59.3 49 0.0017 35.6 10.8 54 218-272 148-213 (433)
436 1qtw_A Endonuclease IV; DNA re 59.2 67 0.0023 31.0 11.4 124 160-289 12-150 (285)
437 4gj1_A 1-(5-phosphoribosyl)-5- 59.2 26 0.0009 34.4 8.3 191 100-330 33-241 (243)
438 1n7k_A Deoxyribose-phosphate a 59.2 1.2E+02 0.0043 29.6 13.1 144 158-327 34-183 (234)
439 3k4h_A Putative transcriptiona 59.1 69 0.0024 30.8 11.4 201 93-315 25-228 (292)
440 2f6u_A GGGPS, (S)-3-O-geranylg 59.0 1.4E+02 0.0047 29.2 14.5 69 228-307 146-215 (234)
441 3brq_A HTH-type transcriptiona 58.9 80 0.0027 30.2 11.9 198 94-316 34-237 (296)
442 2cho_A Glucosaminidase, hexosa 58.8 41 0.0014 38.5 10.8 116 158-273 142-265 (716)
443 1f6k_A N-acetylneuraminate lya 58.8 1.5E+02 0.0052 29.6 19.6 192 94-331 20-221 (293)
444 1rvg_A Fructose-1,6-bisphospha 58.8 31 0.0011 35.3 8.9 101 203-315 5-109 (305)
445 3f4w_A Putative hexulose 6 pho 58.7 1.2E+02 0.004 28.3 15.2 92 204-310 41-134 (211)
446 1qop_A Tryptophan synthase alp 58.6 1.4E+02 0.0049 29.3 14.1 120 204-334 5-147 (268)
447 1vc4_A Indole-3-glycerol phosp 58.5 73 0.0025 31.4 11.5 113 99-250 66-180 (254)
448 1m3u_A 3-methyl-2-oxobutanoate 58.4 33 0.0011 34.4 8.8 97 171-285 35-137 (264)
449 2og9_A Mandelate racemase/muco 58.3 41 0.0014 35.2 10.1 94 92-215 215-310 (393)
450 2eja_A URO-D, UPD, uroporphyri 58.2 12 0.00042 38.3 5.9 83 231-330 179-271 (338)
451 2y88_A Phosphoribosyl isomeras 58.1 13 0.00044 36.0 5.7 69 233-309 33-102 (244)
452 4e38_A Keto-hydroxyglutarate-a 58.1 29 0.00098 34.1 8.2 87 205-309 26-112 (232)
453 2pgw_A Muconate cycloisomerase 57.9 1.8E+02 0.006 30.1 17.8 162 96-294 147-308 (384)
454 4ay7_A Methylcobalamin\: coenz 57.8 1.7E+02 0.0057 29.8 15.8 137 101-272 193-346 (348)
455 4dpp_A DHDPS 2, dihydrodipicol 57.7 67 0.0023 33.6 11.4 30 420-449 295-334 (360)
456 2a5h_A L-lysine 2,3-aminomutas 57.3 82 0.0028 33.3 12.4 130 200-334 147-283 (416)
457 3ozy_A Putative mandelate race 57.3 1.9E+02 0.0063 30.2 17.5 165 94-296 149-315 (389)
458 3otr_A Enolase; structural gen 57.1 1.3E+02 0.0045 32.4 13.8 137 94-265 280-419 (452)
459 1r0m_A N-acylamino acid racema 57.1 24 0.00083 36.7 8.0 99 94-222 199-297 (375)
460 4dye_A Isomerase; enolase fami 57.0 51 0.0017 34.8 10.6 100 92-222 220-319 (398)
461 3tr9_A Dihydropteroate synthas 56.8 68 0.0023 32.9 11.1 74 227-309 45-131 (314)
462 1f8m_A Isocitrate lyase, ICL; 56.6 75 0.0025 34.1 11.7 196 162-377 165-403 (429)
463 3khj_A Inosine-5-monophosphate 56.5 1.2E+02 0.004 31.6 13.1 126 101-251 107-236 (361)
464 1ydn_A Hydroxymethylglutaryl-C 56.5 57 0.002 32.6 10.5 20 102-121 83-102 (295)
465 2bmb_A Folic acid synthesis pr 56.3 2.4E+02 0.0082 31.1 18.4 39 77-119 228-275 (545)
466 1vzw_A Phosphoribosyl isomeras 56.2 13 0.00044 36.0 5.4 68 233-309 34-103 (244)
467 3toy_A Mandelate racemase/muco 56.2 34 0.0012 35.9 9.1 103 92-223 221-323 (383)
468 3d8u_A PURR transcriptional re 56.2 88 0.003 29.7 11.5 196 95-315 17-217 (275)
469 3v3w_A Starvation sensing prot 56.1 27 0.00092 37.3 8.3 101 93-222 235-335 (424)
470 3gbv_A Putative LACI-family tr 56.1 77 0.0026 30.5 11.2 198 94-315 22-232 (304)
471 3tr2_A Orotidine 5'-phosphate 56.1 1.5E+02 0.0053 28.9 15.2 171 96-307 19-213 (239)
472 4fxs_A Inosine-5'-monophosphat 56.0 45 0.0015 36.4 10.2 69 234-311 233-301 (496)
473 2nql_A AGR_PAT_674P, isomerase 56.0 28 0.00097 36.4 8.4 116 92-237 216-331 (388)
474 2cw6_A Hydroxymethylglutaryl-C 56.0 1.1E+02 0.0039 30.6 12.7 18 103-120 85-102 (298)
475 2qul_A D-tagatose 3-epimerase; 56.0 52 0.0018 31.9 9.9 119 160-289 17-157 (290)
476 3sz8_A 2-dehydro-3-deoxyphosph 56.0 17 0.00058 36.9 6.3 179 95-312 31-245 (285)
477 2qde_A Mandelate racemase/muco 56.0 1.9E+02 0.0066 30.0 16.5 163 96-295 145-308 (397)
478 1wbh_A KHG/KDPG aldolase; lyas 55.9 27 0.00091 33.7 7.5 69 228-308 25-93 (214)
479 2p8b_A Mandelate racemase/muco 55.8 1.8E+02 0.0063 29.7 16.6 162 96-294 141-304 (369)
480 4exq_A UPD, URO-D, uroporphyri 55.8 1.6E+02 0.0056 30.4 14.2 145 98-272 197-358 (368)
481 1thf_D HISF protein; thermophI 55.8 38 0.0013 32.7 8.8 70 233-309 32-102 (253)
482 1sjd_A N-acylamino acid racema 55.6 26 0.0009 36.2 8.0 98 94-222 193-291 (368)
483 3go2_A Putative L-alanine-DL-g 55.6 39 0.0013 35.8 9.4 96 93-221 222-318 (409)
484 1olt_A Oxygen-independent copr 55.6 68 0.0023 34.3 11.5 112 102-219 154-286 (457)
485 3vk5_A MOEO5; TIM barrel, tran 55.5 43 0.0015 33.9 9.1 71 207-286 31-104 (286)
486 3b0p_A TRNA-dihydrouridine syn 55.3 53 0.0018 34.0 10.2 78 229-310 68-164 (350)
487 3vni_A Xylose isomerase domain 55.3 1E+02 0.0036 29.8 12.1 118 160-288 17-155 (294)
488 1e0t_A Pyruvate kinase, PK; ph 55.2 2.3E+02 0.0079 30.6 19.6 158 94-272 169-334 (470)
489 3mwc_A Mandelate racemase/muco 54.9 30 0.001 36.6 8.4 105 92-226 213-317 (400)
490 1xim_A D-xylose isomerase; iso 54.8 91 0.0031 32.4 12.1 85 161-250 34-135 (393)
491 3sjn_A Mandelate racemase/muco 54.8 25 0.00084 36.8 7.6 103 92-223 201-304 (374)
492 3gd6_A Muconate cycloisomerase 54.7 65 0.0022 33.7 11.0 99 93-222 196-296 (391)
493 1gte_A Dihydropyrimidine dehyd 54.7 41 0.0014 40.0 10.4 78 228-309 645-734 (1025)
494 1vhc_A Putative KHG/KDPG aldol 54.6 30 0.001 33.6 7.7 69 228-308 26-94 (224)
495 3r4e_A Mandelate racemase/muco 54.5 26 0.00088 37.3 7.8 101 93-222 229-329 (418)
496 3be7_A Zn-dependent arginine c 54.3 38 0.0013 34.7 9.0 69 229-307 164-243 (408)
497 3usb_A Inosine-5'-monophosphat 54.2 1.1E+02 0.0038 33.4 13.0 131 99-251 256-388 (511)
498 2zds_A Putative DNA-binding pr 54.2 27 0.00092 35.0 7.6 74 196-270 106-200 (340)
499 2gl5_A Putative dehydratase pr 54.1 24 0.00081 37.2 7.4 103 92-223 226-328 (410)
500 3r0u_A Enzyme of enolase super 54.0 2.1E+02 0.0071 29.7 19.5 169 95-297 141-309 (379)
No 1
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=3.7e-117 Score=991.47 Aligned_cols=511 Identities=25% Similarity=0.334 Sum_probs=445.7
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee
Q 007056 75 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 154 (620)
Q Consensus 75 ~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 154 (620)
+.++|+|||||||+|+++..|++++|++|+++|+++||++||+|||+++|+|++++++|++... ... .+.+++|
T Consensus 70 ~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~asp~D~e~v~~i~~~~l--~~~----~~~i~aL 143 (644)
T 3hq1_A 70 RAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGA--IPD----DVTIQVL 143 (644)
T ss_dssp SCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTCHHHHHHHHHHHHTTC--SCT----TCEEEEE
T ss_pred CCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhcCC--CCC----CeEEEEE
Confidence 4589999999999999999999999999999999999999999999999999999999998521 011 2689999
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC------EEEEcCCCCCCC
Q 007056 155 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD------DVEFSPEDAGRS 228 (620)
Q Consensus 155 ~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~------~V~f~~ed~~r~ 228 (620)
+|+++.||+++++++++++.++||+|+++||+|++++||+|++|+++++.++++++++++.. .|.|++||++|+
T Consensus 144 ~r~~~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrt 223 (644)
T 3hq1_A 144 TQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGT 223 (644)
T ss_dssp EESCHHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGS
T ss_pred ecCCHhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999988877522 278999999999
Q ss_pred CHHHHHHHHHHHHHc---CCc---EEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh
Q 007056 229 DRKFLYEILGEVIKV---GAT---TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 302 (620)
Q Consensus 229 d~e~l~~~~~~~~~a---Ga~---~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a 302 (620)
+++|++++++++.++ |++ +|+||||+|+++|.+++++|+++++++|..++++|++|||||+|||+||+++|+++
T Consensus 224 d~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~A 303 (644)
T 3hq1_A 224 ELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAA 303 (644)
T ss_dssp CHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHh
Confidence 999999999999986 577 89999999999999999999999999987667999999999999999999999999
Q ss_pred cCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeecc
Q 007056 303 GARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESG 382 (620)
Q Consensus 303 GA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sG 382 (620)
||++||+|+||+|||+||++||+|+++|+. +|+++++|+++|.+++++|++++|+++++|+||||+|||+||||
T Consensus 304 GA~~Vdgti~G~GERaGNa~LE~lv~~L~~------~Gi~tgidl~~L~~is~~ve~~~g~~v~~~kpiVG~~aFah~SG 377 (644)
T 3hq1_A 304 GADRIEGCLFGNGERTGNVCLVTLGLNLFS------RGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSG 377 (644)
T ss_dssp TCCEEEEBGGGCSSTTCBCBHHHHHHHHHT------TTCCCSSCCTTHHHHHHHHHHHHSCCCCTTCTTTSTTTTEECCH
T ss_pred CCCEEEecCCCCCccccCccHHHHHHHHHh------cccCCccCHHHHHHHHHHHHHHhCCCCCCCcccccccceeeccc
Confidence 999999999999999999999999999985 47899999999999999999999999999999999999999999
Q ss_pred ccccccccCC--------------------ccccccCCcccCCcccccceEeeeccccHHHHHHHHH-HcCCCCCHH---
Q 007056 383 IHQDGMLKHK--------------------GTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLK-ELGYELNDE--- 438 (620)
Q Consensus 383 iH~dgi~k~~--------------------~~Ye~i~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~-~lG~~l~~~--- 438 (620)
|||||++|++ .+||||||++||++|+ ..|+|||||||++|+++|+ ++||+++++
T Consensus 378 iHqdailK~~~~~~~~~~~~~~~~~~~~w~~tYe~idPe~VG~~~~--~vi~v~~~SGk~~v~~~l~~~lG~~l~~~~~~ 455 (644)
T 3hq1_A 378 SHQDAINKGLDAMKLDADAADCDVDDMLWQVPYLPIDPRDVGRTYE--AVIRVNSQSGKGGVAYIMKTDHGLSLPRRLQI 455 (644)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGSCCCCTTCSSCGGGGTCCCE--ECC-------CCCHHHHHHHHHCCCCCHHHHH
T ss_pred ccHHHHhcCchhhhhhhhcccccccccccccccccCCHHHcCCcce--eEEeccCcCCHHHHHHHHHHhcCCCCChHHHH
Confidence 9999999997 4999999999998763 3577999999999999998 799999985
Q ss_pred HHHHHHHHHHHH-HHhcCcCCHHHHHHHHHHHhcCCcceEEEeeEEEEecc--CCeeEEEEEEEccCCeEEEEEEEeCCH
Q 007056 439 QLGTIFWHFKAV-AEQKKRVTDADLIALVSDEIFQPEVVWKLLDMQVTCGT--LGLSTATVKLMDANGEEHVACSTGTGP 515 (620)
Q Consensus 439 ~~~~~~~~vk~~-a~~~~~v~~~el~~L~~~~~~~~~~~~~L~~~~v~~g~--~~~~~AtV~l~~~dG~~~~~~a~G~GP 515 (620)
++.+++++++++ +++|++++++||++||.++|......|++.++++.++. .+.++|+|+|. ++|++++.+++||||
T Consensus 456 ~~~~~~~~~~d~~~~~g~ev~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~l~-~~g~~~~~~a~GnGP 534 (644)
T 3hq1_A 456 EFSQVIQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTSITATVK-INGVETEISGSGNGP 534 (644)
T ss_dssp HHHHHHHHC---------CCCHHHHHHHHHHHHTSCCSSEEEEEEEEECCSSTTCCEEEEEEEE-ETTEEEEEEEEESSH
T ss_pred HHHHHHHHHHHhhhccCCcccHHHHHHHHHHHhccCCCceEEEEEEEEEeecCCCceEEEEEEE-ECCEEEEEEEecCCh
Confidence 566777777776 34678899999999999988766667999999998764 34689999998 799999999999999
Q ss_pred HHHHHHHHHHhhcCCceeeeeeeeecCCCCCceEEEEEEEEecc---------CC------c-ccccCCCc--------c
Q 007056 516 VDSAYKAVDLIVKEPATLLEYSMNAVTAGIDAIATTRVLIRGEK---------SQ------L-STHASTGE--------T 571 (620)
Q Consensus 516 VdA~~~AL~~~~~~~~~L~dY~v~av~~G~dA~a~~~V~i~~~~---------~~------~-~~~~~~g~--------~ 571 (620)
|||+++||+++ +.+++|.||++|++++|+||+|+++|+++.++ +. | ...++.|+ .
T Consensus 535 VdA~~~Al~~~-~~~~~l~~y~~~a~~~G~da~a~~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (644)
T 3hq1_A 535 LAAFVHALADV-GFDVAVLDYYEHAMSAGDDAQAAAYVEASVTIASPAQPGEAGRHASDPVTIASPAQPGEAGRHASDPV 613 (644)
T ss_dssp HHHHHHHHHTT-TCEEEEEEEEEEESSSSTTCCEEEEEEEEEEC------------------------------------
T ss_pred HHHHHHHHHHc-CCCceeeEEEEEccCCCCCceEEEEEEEEecccccccccccCcccccccccccccccccccccccccc
Confidence 99999999995 99999999999999999999999999998541 00 0 00000000 0
Q ss_pred cCceEEEEeecccHHHHHHHHHHHHHHhhh
Q 007056 572 VQRTFSGTGAGMDIVVSSVKAYIGALNKML 601 (620)
Q Consensus 572 ~~~~~~g~G~~~DIi~AS~~A~i~A~N~l~ 601 (620)
..++|||+|+|+||++||++||++|+||++
T Consensus 614 ~~~~~~g~g~~~di~~AS~~A~~~a~n~~~ 643 (644)
T 3hq1_A 614 TSKTVWGVGIAPSITTASLRAVVSAVNRAA 643 (644)
T ss_dssp -CEEEEEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecccHHHHHHHHHHHHHHhhc
Confidence 122999999999999999999999999986
No 2
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=3.4e-95 Score=778.15 Aligned_cols=362 Identities=59% Similarity=0.845 Sum_probs=292.6
Q ss_pred CCCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceE
Q 007056 72 PDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI 151 (620)
Q Consensus 72 ~~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i 151 (620)
..|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.++|+|+++++++++..++ +.+
T Consensus 8 ~~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i 78 (370)
T 3rmj_A 8 TQTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITK---------STV 78 (370)
T ss_dssp --CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSS---------SEE
T ss_pred CCCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCC---------CeE
Confidence 45778999999999999999999999999999999999999999999999999999999999875322 579
Q ss_pred EeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHH
Q 007056 152 CGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRK 231 (620)
Q Consensus 152 ~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e 231 (620)
++|+|++++|+++++++++++|.++|++|+++||+|+++|+++|++|+++++.++|++|+++|.. |+|++||++|++++
T Consensus 79 ~~l~r~~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~ed~~r~~~~ 157 (370)
T 3rmj_A 79 CSLSRAIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDD-VEFSCEDALRSEID 157 (370)
T ss_dssp EEEEESSHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSC-EEEEEETGGGSCHH
T ss_pred EEEecCCHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCE-EEEecCCCCccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986 99999999999999
Q ss_pred HHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 232 FLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
|+.++++++.++||++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|+
T Consensus 158 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 237 (370)
T 3rmj_A 158 FLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTV 237 (370)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEec
Confidence 99999999999999999999999999999999999999999986545899999999999999999999999999999999
Q ss_pred ccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeeccccccccccC
Q 007056 312 NGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKH 391 (620)
Q Consensus 312 ~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sGiH~dgi~k~ 391 (620)
+|||||+||++||+|+++|+.+.+ .+|++|++|+++|.++++++++++|+++++++||||+|+|+|||||||||++||
T Consensus 238 ~GlGeraGN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~aF~h~sGiH~d~i~k~ 315 (370)
T 3rmj_A 238 NGLGERAGNASVEEIVMALKVRHD--LFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKH 315 (370)
T ss_dssp GGCSSTTCBCBHHHHHHHHHHTHH--HHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSCTTTSTTTTC-------------
T ss_pred cccCcccccccHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHhcccccHHHHHhC
Confidence 999999999999999999986521 148899999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCcccCCcccccceEeeeccccHHHHHHHHHHcCCCCC-HHHHHHHHHHHH
Q 007056 392 KGTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLKELGYELN-DEQLGTIFWHFK 448 (620)
Q Consensus 392 ~~~Ye~i~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~~lG~~l~-~~~~~~~~~~vk 448 (620)
|.+||||+|++||+.+ ++|+|||||||++|+++|+++||+++ ++++++++++||
T Consensus 316 ~~~Ye~~~P~~vG~~~---~~i~~~~~sG~~~i~~~l~~~g~~~~~~~~~~~~~~~~k 370 (370)
T 3rmj_A 316 RETYEIMSAESVGWAT---NRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFK 370 (370)
T ss_dssp -CCSCCCCHHHHTCC-------------------------------------------
T ss_pred chhccccCHHHcCCCC---ceEeccCCCCHHHHHHHHHHcCCCCCcHHHHHHHHHHhC
Confidence 9999999999999632 25999999999999999999999999 889999999987
No 3
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=4.1e-94 Score=777.75 Aligned_cols=384 Identities=29% Similarity=0.431 Sum_probs=338.3
Q ss_pred CCCcCCC---CCCCCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcc
Q 007056 63 RPEYIPN---RIPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGN 139 (620)
Q Consensus 63 ~~~~~~~---~~~~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~ 139 (620)
+.+|.|. +.+++++|+|+|||||||+|++++.|++++|++|+++|+++||++||+|||.++|+|+++++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~--- 99 (423)
T 3ivs_A 23 GNPYGPNPSDFLSRVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKL--- 99 (423)
T ss_dssp ------CGGGGGCCTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS---
T ss_pred CCCCCCCccccccCCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHhc---
Confidence 4444443 6667889999999999999999999999999999999999999999999999999999999998864
Q ss_pred cccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 007056 140 AVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 219 (620)
Q Consensus 140 ~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~ 219 (620)
++.+.+++|+|++.+|+++++++ |+++|++|+++||.|++++++++++|+++++.++|++||++|.+ |+
T Consensus 100 ------~~~~~v~~~~r~~~~di~~A~~a----G~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-V~ 168 (423)
T 3ivs_A 100 ------GLKCKILTHIRCHMDDARVAVET----GVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIE-VR 168 (423)
T ss_dssp ------CCSSEEEEEEESCHHHHHHHHHT----TCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCE-EE
T ss_pred ------CCCCEEEEeeccChhhHHHHHHc----CCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCE-EE
Confidence 22357899999999999998875 89999999999999999999999999999999999999999985 99
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHH
Q 007056 220 FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG 299 (620)
Q Consensus 220 f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaA 299 (620)
|++||++|++++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++.++ ++|++|||||+|||+||+++|
T Consensus 169 ~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlAvAN~laA 244 (423)
T 3ivs_A 169 FSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS----CDIECHFHNDTGMAIANAYCA 244 (423)
T ss_dssp EEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS----SEEEEEEBCTTSCHHHHHHHH
T ss_pred EEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC----CeEEEEECCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999863 789999999999999999999
Q ss_pred HHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceee
Q 007056 300 ACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAH 379 (620)
Q Consensus 300 v~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h 379 (620)
+++||++||+|++|||||+||++||+|+++|..+.. +++.+++|++.|.+++++|++++|+++|+||||||+|||+|
T Consensus 245 v~aGa~~vd~ti~GlGERaGNa~Le~vv~~L~~~~~---~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG~~aFah 321 (423)
T 3ivs_A 245 LEAGATHIDTSILGIGERNGITPLGALLARMYVTDR---EYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFTH 321 (423)
T ss_dssp HHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTSTTTTEE
T ss_pred HHhCCCEEEEecccccCcccchhHHHHHHHHHhhcc---cCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchhHhHHHh
Confidence 999999999999999999999999999999976431 25679999999999999999999999999999999999999
Q ss_pred eccccccccccCCccccccCCcccCCcccccceEeee-ccccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCcCC
Q 007056 380 ESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRVT 458 (620)
Q Consensus 380 ~sGiH~dgi~k~~~~Ye~i~Pe~vG~~r~~~~~i~lg-~~SG~~~i~~~l~~lG~~l~~~~~~~~~~~vk~~a~~~~~v~ 458 (620)
||||||||++|||.+||||+||+||++|+ +++| |||||++|+++|+++||+++++++.+++++||+++++ +.++
T Consensus 322 ~sGiH~dgilk~~~tYe~~~Pe~vG~~r~----~~v~~k~SG~~~i~~~l~~lG~~l~~~~~~~~~~~vk~l~~~-~~~~ 396 (423)
T 3ivs_A 322 KAGIHAKAILANPSTYEILKPEDFGMSRY----VHVGSRLTGWNAIKSRAEQLNLHLTDAQAKELTVRIKKLADV-RTLA 396 (423)
T ss_dssp ECSGGGGGSSSCGGGCCSSCGGGGTCCCC----EEESSCCCTHHHHHHHHHHTTCCC---CTTTSSTTTTTCC-C-CCCC
T ss_pred hcchhHHHHhCCccccCCcCHHHcCCcce----EEeccccCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhc-CCCC
Confidence 99999999999999999999999999874 8875 9999999999999999999999999999999999985 5799
Q ss_pred HHHHHHHHHHHhcC
Q 007056 459 DADLIALVSDEIFQ 472 (620)
Q Consensus 459 ~~el~~L~~~~~~~ 472 (620)
++||..|+++....
T Consensus 397 ~~el~~i~~~~~~~ 410 (423)
T 3ivs_A 397 MDDVDRVLREYHAD 410 (423)
T ss_dssp TTHHHHHHTTCCC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999776543
No 4
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=8.4e-88 Score=725.44 Aligned_cols=370 Identities=27% Similarity=0.427 Sum_probs=290.4
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee
Q 007056 75 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 154 (620)
Q Consensus 75 ~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 154 (620)
++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||+++|+++++++.+++.. +...+++|
T Consensus 2 ~~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~---------~~~~v~~~ 72 (382)
T 2ztj_A 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLG---------LKAKVVTH 72 (382)
T ss_dssp CCCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC---------CSSEEEEE
T ss_pred CceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcC---------CCcEEEEE
Confidence 469999999999999999999999999999999999999999999999999999999988642 22578999
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEcCCCCCCCCHHH
Q 007056 155 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAGRSDRKF 232 (620)
Q Consensus 155 ~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G--~~~V~f~~ed~~r~d~e~ 232 (620)
+|+..+||++++++ |++.|++|+++||+|++ ++++|++|+++++.++++++|++| ++ |+|++||+++++++|
T Consensus 73 ~r~~~~di~~a~~~----g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~-v~~~~ed~~~~~~~~ 146 (382)
T 2ztj_A 73 IQCRLDAAKVAVET----GVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVE-VRFSAEDTFRSEEQD 146 (382)
T ss_dssp EESCHHHHHHHHHT----TCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSE-EEEEETTTTTSCHHH
T ss_pred cccChhhHHHHHHc----CCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEE-EEEEEEeCCCCCHHH
Confidence 99999999998875 89999999999999999 999999999999999999999999 85 999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhC-CCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~-~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
+.++++++.++ |++|+||||+|+++|.+++++|+.+++.+ + +++|++|||||+|||+||+++|+++||++||+|+
T Consensus 147 ~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~---~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 222 (382)
T 2ztj_A 147 LLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGP---RVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTI 222 (382)
T ss_dssp HHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTT---TSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCC---CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcc
Confidence 99999999999 99999999999999999999999999975 4 4789999999999999999999999999999999
Q ss_pred ccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeeccccccccccC
Q 007056 312 NGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKH 391 (620)
Q Consensus 312 ~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sGiH~dgi~k~ 391 (620)
+|||||+||++||+|+++|+.+.. +|+.+++|+++|.++++++++++|+++++++||||.|+|+|||||||||++||
T Consensus 223 ~GlGeraGN~~lE~vv~~L~~~~~---~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~h~sGiH~~g~~k~ 299 (382)
T 2ztj_A 223 LGIGERNGITPLGGFLARMYTLQP---EYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFSHKAGMHLKAIYIN 299 (382)
T ss_dssp GGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTEECCHHHHHHHHHC
T ss_pred ccccccccchhHHHHHHHHHhhcC---CcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhheecccCCchhhcC
Confidence 999999999999999999987532 24789999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCcccCCcccccceEeee-ccccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHh
Q 007056 392 KGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRVTDADLIALVSDEI 470 (620)
Q Consensus 392 ~~~Ye~i~Pe~vG~~r~~~~~i~lg-~~SG~~~i~~~l~~lG~~l~~~~~~~~~~~vk~~a~~~~~v~~~el~~L~~~~~ 470 (620)
|.+||||+|++||+.| +++++ ++||+++|.++|+++||+++++++.+++++||+++++++ ++++|+..|+.+..
T Consensus 300 ~~~Ye~~~P~~vG~~~----~v~~~s~~sG~~av~~~l~~~g~~~~~~~~~~~~~~vk~~~~~~~-~~~~~~~~~~~~~~ 374 (382)
T 2ztj_A 300 PEAYEPYPPEVFGVKR----KLIIASRLTGRHAIKARAEELGLHYGEEELHRVTQHIKALADRGQ-LTLEELDRILREWI 374 (382)
T ss_dssp GGGGCSSCGGGGTCCC----EECCC-------------------------------------------------------
T ss_pred hhhhcccCHHHcCCcc----EEEecccchhHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHh
Confidence 9999999999999986 47776 569999999999999999999999999999999998866 99999999987765
Q ss_pred c
Q 007056 471 F 471 (620)
Q Consensus 471 ~ 471 (620)
.
T Consensus 375 ~ 375 (382)
T 2ztj_A 375 T 375 (382)
T ss_dssp -
T ss_pred h
Confidence 3
No 5
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=4.9e-81 Score=658.96 Aligned_cols=316 Identities=53% Similarity=0.823 Sum_probs=253.6
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEE
Q 007056 73 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 152 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~ 152 (620)
.|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.++|+|+++++++++..++ +.++
T Consensus 3 ~~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~ 73 (325)
T 3eeg_A 3 LGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTR---------PTIC 73 (325)
T ss_dssp -CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCS---------SEEE
T ss_pred CCCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCC---------CEEE
Confidence 4567999999999999999999999999999999999999999999999999999999999886432 5799
Q ss_pred eecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHH
Q 007056 153 GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKF 232 (620)
Q Consensus 153 ~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~ 232 (620)
+|+|++++|+++++++++++|+++|++|+++||+|+++|+|+|++|+++++.+++++++++|.. |+|++||+++++++|
T Consensus 74 ~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~f~~~d~~~~~~~~ 152 (325)
T 3eeg_A 74 ALTRAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHE-VEFFCEDAGRADQAF 152 (325)
T ss_dssp EECCSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSE-EEEEEETGGGSCHHH
T ss_pred EeecCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEccccccchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
+.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|++
T Consensus 153 ~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~ 232 (325)
T 3eeg_A 153 LARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTIN 232 (325)
T ss_dssp HHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGG
T ss_pred HHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecc
Confidence 99999999999999999999999999999999999999999865458999999999999999999999999999999999
Q ss_pred cccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeeccccccccccCC
Q 007056 313 GIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHK 392 (620)
Q Consensus 313 GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sGiH~dgi~k~~ 392 (620)
|||||+||++||+|+++|+.+++ .+|++|++|+++|.++++++++++|+++++++||||+|+|+|||||||||++|||
T Consensus 233 GlGer~GN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~af~h~sGiH~~~~~k~~ 310 (325)
T 3eeg_A 233 GIGERAGNTALEEVVMAMECHKE--TLGLETGINHKKLVPISHLVSTLMRMQVQSNKAIVGRNAFAHSSGIHQDGFLKHR 310 (325)
T ss_dssp GCCSTTCCCBHHHHHHHHHHTHH--HHCEECCCCGGGHHHHHHHHHHHTTC-----------------------------
T ss_pred cccccccchhHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHhccccHHHHhcCh
Confidence 99999999999999999996431 1478999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCC
Q 007056 393 GTYEIISP 400 (620)
Q Consensus 393 ~~Ye~i~P 400 (620)
.+||||+-
T Consensus 311 ~~ye~~~~ 318 (325)
T 3eeg_A 311 ETYEIIDE 318 (325)
T ss_dssp --------
T ss_pred hhcCCCCC
Confidence 99999975
No 6
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=3.6e-77 Score=633.04 Aligned_cols=317 Identities=29% Similarity=0.426 Sum_probs=283.8
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHH-HHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCc-cce
Q 007056 73 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIAR-QLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGY-VPV 150 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~-~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l-~~~ 150 (620)
.|++|+|+|||||||+|++++.|++++|++|++ .|+++||++||+|||.++|+||++++++++.... .. .+ ...
T Consensus 16 ~~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~--~~--~~~~~~ 91 (337)
T 3ble_A 16 VETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAAT--EQ--LTERIE 91 (337)
T ss_dssp ---CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHH--TT--CGGGEE
T ss_pred CCCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhh--hc--cCCCCe
Confidence 356799999999999999999999999999999 9999999999999999999999999999984210 00 01 147
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC---CCC
Q 007056 151 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGR 227 (620)
Q Consensus 151 i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed---~~r 227 (620)
+++|+|+.+ |+++++++ |++.|++|+++||.|+++++|+|++|+++++.++++++|++|++ |+|++|| +++
T Consensus 92 i~~l~~~~~-~i~~a~~~----g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~-v~~~~~~~~~~~~ 165 (337)
T 3ble_A 92 ILGFVDGNK-TVDWIKDS----GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK-INVYLEDWSNGFR 165 (337)
T ss_dssp EEEESSTTH-HHHHHHHH----TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETHHHHHH
T ss_pred EEEEccchh-hHHHHHHC----CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEECCCCCc
Confidence 899999876 99999887 88999999999999999999999999999999999999999985 9999999 999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
++++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++++| +++|++|||||+|||+||+++|+++||++|
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p---~~~i~~H~Hnd~GlA~AN~laAv~aGa~~v 242 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP---DIHFEFHGHNDYDLSVANSLQAIRAGVKGL 242 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT---TSCEEEECBCTTSCHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC---CCeEEEEecCCcchHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999997 378999999999999999999999999999
Q ss_pred eeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeeccccccc
Q 007056 308 EVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDG 387 (620)
Q Consensus 308 d~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sGiH~dg 387 (620)
|+|++|||||+||++||+|+++|+.+ +|+.+++|+++|.++++++++++|+++++++|++|.++|+|+||||+||
T Consensus 243 d~tv~GlG~~aGN~~~E~lv~~L~~~-----~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg~~~f~h~~GiH~~g 317 (337)
T 3ble_A 243 HASINGLGERAGNTPLEALVTTIHDK-----SNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFTQTAGVHADG 317 (337)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHHH-----SSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTSTTTTCC--------
T ss_pred EEecccccccccchhHHHHHHHHHHh-----cCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchhhhhhheecccCcCc
Confidence 99999999999999999999999974 3788999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCcccCCcc
Q 007056 388 MLKHKGTYEIISPEDIGLER 407 (620)
Q Consensus 388 i~k~~~~Ye~i~Pe~vG~~r 407 (620)
++|||.+||||+||+||++|
T Consensus 318 ~~k~~~~ye~~~P~~vG~~~ 337 (337)
T 3ble_A 318 DKKGNLYANPILPERFGRKR 337 (337)
T ss_dssp ----CTTCCSCCGGGGTCCC
T ss_pred eeCCccccCCCChHHcCCCC
Confidence 99999999999999999864
No 7
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=2.5e-67 Score=547.30 Aligned_cols=284 Identities=47% Similarity=0.737 Sum_probs=256.4
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 153 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 153 (620)
+++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.++|+|+++++++++..++ +.+++
T Consensus 3 m~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~~ 73 (293)
T 3ewb_X 3 LKKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKH---------CSVTG 73 (293)
T ss_dssp CEEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCS---------SEEEE
T ss_pred CCeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCC---------CEEEE
Confidence 357999999999999999999999999999999999999999999999999999999999886432 57999
Q ss_pred ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHH
Q 007056 154 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 233 (620)
Q Consensus 154 ~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l 233 (620)
|+|++++|+++++++++++|.++|++|+++||+|+++|+++|++|+++++.+++++++++|.. |+|++||+++++++|+
T Consensus 74 l~~~~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~~d~~~~~~~~~ 152 (293)
T 3ewb_X 74 LARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDV-VQFSPEDATRSDRAFL 152 (293)
T ss_dssp EEESSHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSC-EEEEEETGGGSCHHHH
T ss_pred EecCCHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCE-EEEEeccCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986 9999999999999999
Q ss_pred HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccc
Q 007056 234 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 313 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~G 313 (620)
.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|++|
T Consensus 153 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~G 232 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTING 232 (293)
T ss_dssp HHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred HHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccc
Confidence 99999999999999999999999999999999999999998655689999999999999999999999999999999999
Q ss_pred ccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCC
Q 007056 314 IGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHK 369 (620)
Q Consensus 314 lGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~ 369 (620)
||||+||++||+|+++|+.+.+ .+|++|++|+++|.++++++++++|+++++|+
T Consensus 233 lGeraGN~~~E~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~ 286 (293)
T 3ewb_X 233 IGERAGNTALEEVAVALHIRKD--FYQAETNIVLNQFKNSSDLISRLSGMPVPRNE 286 (293)
T ss_dssp CCTTTCBCBHHHHHHHHHHTHH--HHCEEECCCGGGHHHHHHHHHHC---------
T ss_pred cccccccHhHHHHHHHHHhhhh--hcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999996421 14889999999999999999999999999985
No 8
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=7.7e-61 Score=501.54 Aligned_cols=282 Identities=20% Similarity=0.294 Sum_probs=252.7
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC---h--hHH-HHHHHHHHHhcccccccCC
Q 007056 73 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--EDF-EAVRTIAKEVGNAVDAESG 146 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s---~--~d~-e~v~~i~~~~~~~~~~~~~ 146 (620)
.|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.++ | .|. +.++.+.+ . .
T Consensus 3 ~~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~----~-~---- 73 (307)
T 1ydo_A 3 YPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDR----E-K---- 73 (307)
T ss_dssp CCSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC----C-T----
T ss_pred CCCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhh----c-C----
Confidence 356799999999999999999999999999999999999999999997543 3 233 33332221 1 1
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE------E
Q 007056 147 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 220 (620)
Q Consensus 147 l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~------f 220 (620)
...+++|.+ +.+|+++++++ |++.|++|.++||.|+++|+++|++|+++++.++++++|++|++ |+ |
T Consensus 74 -~~~~~~l~~-~~~~i~~a~~~----g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-v~~~i~~~~ 146 (307)
T 1ydo_A 74 -GVTYAALVP-NQRGLENALEG----GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLT-TRAYLSTVF 146 (307)
T ss_dssp -TCEEEEECC-SHHHHHHHHHH----TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTT
T ss_pred -CCeEEEEeC-CHHhHHHHHhC----CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEEEe
Confidence 146788885 78899999887 89999999999999999999999999999999999999999985 64 7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHH
Q 007056 221 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 300 (620)
Q Consensus 221 ~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv 300 (620)
++||++|++++|+.++++++.++|+++|+||||+|+++|++++++|+.+++++| +++|++|||||+|||+||+++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~---~~~l~~H~Hnd~Gla~AN~laAv 223 (307)
T 1ydo_A 147 GCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP---ANQIALHFHDTRGTALANMVTAL 223 (307)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC---GGGEEEECBGGGSCHHHHHHHHH
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCCchHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999997 47899999999999999999999
Q ss_pred HhcCcEEeeccccccC------CcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCc
Q 007056 301 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGA 374 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~ 374 (620)
++||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|++++++.|+.|.
T Consensus 224 ~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~------~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~~ 297 (307)
T 1ydo_A 224 QMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQ------MDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFK 297 (307)
T ss_dssp HHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHHT
T ss_pred HhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHHH
Confidence 9999999999999999 9999999999999986 378899999999999999999999999999999988
Q ss_pred cceee
Q 007056 375 NAFAH 379 (620)
Q Consensus 375 naF~h 379 (620)
...-|
T Consensus 298 ~~~~~ 302 (307)
T 1ydo_A 298 SSLEH 302 (307)
T ss_dssp C----
T ss_pred Hhhhh
Confidence 76665
No 9
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=1.3e-58 Score=483.22 Aligned_cols=276 Identities=20% Similarity=0.321 Sum_probs=248.6
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC---h--hHHH-HHHHHHHHhcccccccCCc
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--EDFE-AVRTIAKEVGNAVDAESGY 147 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s---~--~d~e-~v~~i~~~~~~~~~~~~~l 147 (620)
|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+||+.++ | .|++ .++.+.+ . . +
T Consensus 3 ~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~-~----~---~- 73 (298)
T 2cw6_A 3 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK-F----P---G- 73 (298)
T ss_dssp CSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCC-C----T---T-
T ss_pred CCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhh-C----C---C-
Confidence 56799999999999999999999999999999999999999999996544 3 2433 2222221 1 1 1
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE------Ec
Q 007056 148 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 221 (620)
Q Consensus 148 ~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~------f~ 221 (620)
..++++. .+.+++++++++ |++.|++|.++||.|+++|++++++|+++++.++++++|++|++ |+ |+
T Consensus 74 -~~~~~l~-~~~~~i~~a~~a----g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~-v~~~l~~~~~ 146 (298)
T 2cw6_A 74 -INYPVLT-PNLKGFEAAVAA----GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANIS-VRGYVSCALG 146 (298)
T ss_dssp -CBCCEEC-CSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETTTC
T ss_pred -CEEEEEc-CCHHhHHHHHHC----CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEee
Confidence 2455565 678899988875 89999999999999999999999999999999999999999985 64 78
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 222 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 222 ~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
+||+++++++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++++| +++|++|||||+|||+||+++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~---~~~i~~H~Hn~~Gla~An~laA~~ 223 (298)
T 2cw6_A 147 CPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVP---LAALAVHCHDTYGQALANTLMALQ 223 (298)
T ss_dssp BTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSC---GGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997 478999999999999999999999
Q ss_pred hcCcEEeeccccccC------CcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCc
Q 007056 302 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGA 374 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~ 374 (620)
+||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++++++|+.|.
T Consensus 224 aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~------~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
T 2cw6_A 224 MGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEG------LGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATC 296 (298)
T ss_dssp TTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH------HTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC
T ss_pred hCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhhhc
Confidence 999999999999999 9999999999999986 378899999999999999999999999999998874
No 10
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.8e-58 Score=481.51 Aligned_cols=276 Identities=20% Similarity=0.276 Sum_probs=249.9
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCCh-----hHH-HHHHHHHHHhcccccccCC
Q 007056 73 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK-----EDF-EAVRTIAKEVGNAVDAESG 146 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-----~d~-e~v~~i~~~~~~~~~~~~~ 146 (620)
.|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.+++ .|+ +.++.+++ .
T Consensus 5 ~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~----~------ 74 (302)
T 2ftp_A 5 LPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ----R------ 74 (302)
T ss_dssp CCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC----C------
T ss_pred CCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh----c------
Confidence 4567999999999999999999999999999999999999999999965432 233 33333322 1
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE------E
Q 007056 147 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 220 (620)
Q Consensus 147 l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~------f 220 (620)
....+++|. .+.++|++++++ |++.|++|.++|+.|+++|+|+|++|+++++.++|++|+++|+. |+ |
T Consensus 75 ~~~~~~~l~-~~~~~i~~a~~a----G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~-V~~~l~~~~ 148 (302)
T 2ftp_A 75 PGVTYAALA-PNLKGFEAALES----GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR-VRGYISCVL 148 (302)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHT----TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTT
T ss_pred CCCEEEEEe-CCHHHHHHHHhC----CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEe
Confidence 113577787 588999998875 99999999999999999999999999999999999999999985 75 7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHH
Q 007056 221 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 300 (620)
Q Consensus 221 ~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv 300 (620)
++||.++++++|+.++++++.++|+++|+||||+|+++|+++.++++.+++++| +++|++|+|||+|||+||+++|+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~An~laAv 225 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP---RERLAGHFHDTYGQALANIYASL 225 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC---GGGEEEEEBCTTSCHHHHHHHHH
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEeCCCccHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999987 47899999999999999999999
Q ss_pred HhcCcEEeeccccccC------CcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccC
Q 007056 301 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVG 373 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG 373 (620)
++||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++++++|+.+
T Consensus 226 ~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~------~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
T 2ftp_A 226 LEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG------LEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKAL 298 (302)
T ss_dssp HTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHHH
T ss_pred HhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhhc
Confidence 9999999999999999 9999999999999996 37889999999999999999999999999999874
No 11
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=3.3e-56 Score=494.18 Aligned_cols=278 Identities=15% Similarity=0.196 Sum_probs=247.6
Q ss_pred CCCCCceEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHhHcCCCEEEEecCCC--------ChhHHHHHHHHHHHhcccc
Q 007056 71 IPDPNYVRVFDTTLRDGEQSPG-ATLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNAV 141 (620)
Q Consensus 71 ~~~~~~V~I~DtTLRDG~Qs~g-~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~--------s~~d~e~v~~i~~~~~~~~ 141 (620)
+.++++|+|+|||||||+|+++ ..|++++|++|++.|+++||++||+|||++ ++++|++++.|.+.+++
T Consensus 19 ~~~~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~-- 96 (539)
T 1rqb_A 19 VSEPREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPN-- 96 (539)
T ss_dssp CCCSEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTT--
T ss_pred CCCCCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCC--
Confidence 3455779999999999999996 589999999999999999999999999976 88999999999986433
Q ss_pred cccCCccceEEeecccc--------hhh-HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 007056 142 DAESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS 212 (620)
Q Consensus 142 ~~~~~l~~~i~~~~r~~--------~~d-I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~ 212 (620)
..+++|+|+. ++| ++..++...++|++.|++|.++||+ +++.++++++++
T Consensus 97 -------~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak~ 155 (539)
T 1rqb_A 97 -------SRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVKK 155 (539)
T ss_dssp -------SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHH
T ss_pred -------CEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHHH
Confidence 3677888742 122 3444555566799999999999986 456799999999
Q ss_pred cCCCEE--EEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcc
Q 007056 213 LGCDDV--EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLG 290 (620)
Q Consensus 213 ~G~~~V--~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~G 290 (620)
+|.. | .|+++|+++++++|+.++++++.++||++|+||||+|+++|.+++++|+.+++++|+ +++|++|||||+|
T Consensus 156 ~G~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~--~i~I~~H~Hnd~G 232 (539)
T 1rqb_A 156 AGKH-AQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQ--KTQINLHCHSTTG 232 (539)
T ss_dssp TTCE-EEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCT--TCCEEEEEBCTTS
T ss_pred CCCe-EEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCC--CceEEEEeCCCCC
Confidence 9985 6 578899999999999999999999999999999999999999999999999999972 4789999999999
Q ss_pred hHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCc
Q 007056 291 LSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKA 370 (620)
Q Consensus 291 lAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~p 370 (620)
||+||+++|+++||++||+|++|+|||+||++||+|+++|+. +|+++++|++.|.+++++++++.++..+++.|
T Consensus 233 lAvAN~laAveAGa~~VD~ti~g~GertGN~~lE~lv~~L~~------~g~~tgidl~~L~~is~~v~~~~~~~~~~~~~ 306 (539)
T 1rqb_A 233 VTEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTESVAEMLEG------TGYTTNLDYDRLHKIRDHFKAIRPKYKKFESK 306 (539)
T ss_dssp CHHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHHHHHHTTT------SSEECCCCHHHHHHHHHHHHHHGGGGGGGCCS
T ss_pred hHHHHHHHHHHhCCCEEEEeccccCCCccChhHHHHHHHHHh------cCCCchhhHHHHHHHHHHHHHHhCCCcCCCCC
Confidence 999999999999999999999999999999999999999986 37889999999999999999999999888888
Q ss_pred c-cCccceeee
Q 007056 371 I-VGANAFAHE 380 (620)
Q Consensus 371 i-vG~naF~h~ 380 (620)
+ +|.++|.|+
T Consensus 307 ~~~~~~v~~he 317 (539)
T 1rqb_A 307 TLVDTSIFKSQ 317 (539)
T ss_dssp CSCCCTHHHHC
T ss_pred ccCCCceEEec
Confidence 8 888888765
No 12
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=2e-55 Score=458.37 Aligned_cols=270 Identities=18% Similarity=0.231 Sum_probs=244.9
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCCh------hHHHHHHHHHHHhcccccccCCc
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK------EDFEAVRTIAKEVGNAVDAESGY 147 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~------~d~e~v~~i~~~~~~~~~~~~~l 147 (620)
|++|+|+|||||||+|++++.|++++|++|++.|+++|+++||+|||.+++ ++++.++.+++. .
T Consensus 2 ~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~--------- 71 (295)
T 1ydn_A 2 AEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-D--------- 71 (295)
T ss_dssp CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-S---------
T ss_pred CCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-C---------
Confidence 467999999999999999999999999999999999999999999987653 467888776542 1
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE------Ec
Q 007056 148 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 221 (620)
Q Consensus 148 ~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~------f~ 221 (620)
...+++|. ++.+++++++++ |++.|++++++||.|++++++++++|+++++.++|++|++.|+. |+ |+
T Consensus 72 ~~~v~~l~-~n~~~i~~a~~~----G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~-V~~~l~~~~~ 145 (295)
T 1ydn_A 72 GVRYSVLV-PNMKGYEAAAAA----HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLA-IRGYVSCVVE 145 (295)
T ss_dssp SSEEEEEC-SSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECSSE
T ss_pred CCEEEEEe-CCHHHHHHHHHC----CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCe-EEEEEEEEec
Confidence 13567777 788999988875 99999999999999999999999999999999999999999985 77 78
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 222 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 222 ~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
+||+++++++++.++++.+.++|+++|+|+||+|.++|.++.++++.+++.+| +++|++|+|||+|||+||+++|++
T Consensus 146 ~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~an~l~Ai~ 222 (295)
T 1ydn_A 146 CPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP---AHSLAGHYHDTGGRALDNIRVSLE 222 (295)
T ss_dssp ETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC---GGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCcchHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999986 378999999999999999999999
Q ss_pred hcCcEEeeccccccC------CcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCC
Q 007056 302 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPH 368 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~ 368 (620)
+||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++++.++..
T Consensus 223 aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~------~g~~~~id~~~l~~~~~~~~~~~~~~~~~~ 289 (295)
T 1ydn_A 223 KGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHE------MGFETGLDLDRLRSAGLFTQALRQDKAALE 289 (295)
T ss_dssp HTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred hCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999999999 9999999999999986 478899999999999999999999987654
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=1.2e-55 Score=483.59 Aligned_cols=311 Identities=19% Similarity=0.277 Sum_probs=269.0
Q ss_pred CCCceEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHhHcCCCEEEEecCCC--------ChhHHHHHHHHHHHhcccccc
Q 007056 73 DPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNAVDA 143 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~-~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~--------s~~d~e~v~~i~~~~~~~~~~ 143 (620)
++++|+|+|||||||+|+++. .|++++|++|++.|+++||+.||+|||++ ++++|++++.+.+.+++
T Consensus 4 ~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~---- 79 (464)
T 2nx9_A 4 AIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPN---- 79 (464)
T ss_dssp CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSS----
T ss_pred CCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCC----
Confidence 356799999999999999975 89999999999999999999999999876 78999999999886443
Q ss_pred cCCccceEEeecccc--------hhh-HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Q 007056 144 ESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG 214 (620)
Q Consensus 144 ~~~l~~~i~~~~r~~--------~~d-I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G 214 (620)
+.+++|+|+. ++| ++..++....+|++.|++|.++||+ +++.++|+++++.|
T Consensus 80 -----~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G 140 (464)
T 2nx9_A 80 -----TPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMG 140 (464)
T ss_dssp -----SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTT
T ss_pred -----CeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCC
Confidence 3577788743 122 2344444455699999999999996 34678999999999
Q ss_pred CCEEE--EcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH
Q 007056 215 CDDVE--FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 292 (620)
Q Consensus 215 ~~~V~--f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 292 (620)
.. |+ ++++|+.+++++|+.++++++.++||++|+||||+|+++|.+++++|+.++++++ ++|++|||||+|||
T Consensus 141 ~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlA 215 (464)
T 2nx9_A 141 AH-AQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD----VELHLHCHSTAGLA 215 (464)
T ss_dssp CE-EEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC----SCEEEEECCTTSCH
T ss_pred CE-EEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC----CeEEEEECCCCChH
Confidence 85 64 4678999999999999999999999999999999999999999999999999983 78999999999999
Q ss_pred HHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCccc
Q 007056 293 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIV 372 (620)
Q Consensus 293 vANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~piv 372 (620)
+||+++|+++||++||+|++|+|||+||++||+|+++|+. .|+++++|++.|.+++++++++.+. +.|++
T Consensus 216 vAN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~------~g~~tgidl~~L~~is~~v~~~~~~----~~~~~ 285 (464)
T 2nx9_A 216 DMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQG------TGYDTGLDIAKLEQIAAYFRDVRKK----YHAFE 285 (464)
T ss_dssp HHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHHHHHHHHH----TGGGC
T ss_pred HHHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHh------cCCCcccCHHHHHHHHHHHHHHHhh----ccccc
Confidence 9999999999999999999999999999999999999996 3788999999999999999999887 34444
Q ss_pred CccceeeeccccccccccCCccccccCCcccCCcccccceEeeecccc--HHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Q 007056 373 GANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKELGYELNDEQLGTIFWHFKAV 450 (620)
Q Consensus 373 G~naF~h~sGiH~dgi~k~~~~Ye~i~Pe~vG~~r~~~~~i~lg~~SG--~~~i~~~l~~lG~~l~~~~~~~~~~~vk~~ 450 (620)
| +.+|..+ ++.+....| .+++...|+++|+. +.+.++++++++.
T Consensus 286 ~---------------------------~~~g~~~----~v~~~~~pGg~~snl~~q~~~~g~~---~~~~~v~~~~~~v 331 (464)
T 2nx9_A 286 G---------------------------MMKGSDA----RILVAQVPGGMLTNMESQLKQQNAL---DKLDLVLEEIPRV 331 (464)
T ss_dssp C---------------------------SCCSCCT----HHHHHCCCHHHHHHHHHHHHTTSCG---GGHHHHHHHHHHH
T ss_pred C---------------------------CCcCCcC----CeEEecCCCchHhHHHHHHHHcCCH---hHHHHHHHHHHHH
Confidence 4 4667654 477888888 99999999999984 5677888888886
Q ss_pred -HHhcC
Q 007056 451 -AEQKK 455 (620)
Q Consensus 451 -a~~~~ 455 (620)
.+.++
T Consensus 332 ~~~~G~ 337 (464)
T 2nx9_A 332 REELGF 337 (464)
T ss_dssp HHHTTT
T ss_pred HHHcCC
Confidence 66666
No 14
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=5.6e-54 Score=456.83 Aligned_cols=275 Identities=22% Similarity=0.264 Sum_probs=245.8
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-------hhHHHHHHHHHHHhccccc
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAG----FPAAS-------KEDFEAVRTIAKEVGNAVD 142 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-------~~d~e~v~~i~~~~~~~~~ 142 (620)
+++|+|+|||||||+|++++.|++++|++|++.|+++||++||+| ||.++ +.++++++.+.+..++
T Consensus 6 ~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~--- 82 (345)
T 1nvm_A 6 SKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISH--- 82 (345)
T ss_dssp CCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSS---
T ss_pred CCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCC---
Confidence 357999999999999999999999999999999999999999998 88765 4578999888764322
Q ss_pred ccCCccceEEee---cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 007056 143 AESGYVPVICGL---SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 219 (620)
Q Consensus 143 ~~~~l~~~i~~~---~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~ 219 (620)
..+++| +|++++++++++++ |++.|+++.+.|+. +++.+++++++++|+. |+
T Consensus 83 ------~~i~~l~~p~~~~~~~i~~a~~a----Gvd~v~I~~~~s~~--------------~~~~~~i~~ak~~G~~-v~ 137 (345)
T 1nvm_A 83 ------AQIATLLLPGIGSVHDLKNAYQA----GARVVRVATHCTEA--------------DVSKQHIEYARNLGMD-TV 137 (345)
T ss_dssp ------SEEEEEECBTTBCHHHHHHHHHH----TCCEEEEEEETTCG--------------GGGHHHHHHHHHHTCE-EE
T ss_pred ------CEEEEEecCCcccHHHHHHHHhC----CcCEEEEEEeccHH--------------HHHHHHHHHHHHCCCE-EE
Confidence 367778 77889999999887 89999999998874 3567889999999985 99
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHH
Q 007056 220 FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG 299 (620)
Q Consensus 220 f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaA 299 (620)
|+++|+++++++|+.++++++.++|+++|+|+||+|.++|.++.++|+.+++++|+ +++|++|||||+|||+||+++|
T Consensus 138 ~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~--~~pi~~H~Hn~~G~avAn~laA 215 (345)
T 1nvm_A 138 GFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKP--ETQVGMHAHHNLSLGVANSIVA 215 (345)
T ss_dssp EEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCT--TSEEEEECBCTTSCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCC--CceEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999963 5899999999999999999999
Q ss_pred HHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHH-hCCCCCCCCcccCcccee
Q 007056 300 ACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEY-TGLHVQPHKAIVGANAFA 378 (620)
Q Consensus 300 v~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~-~g~~v~~~~pivG~naF~ 378 (620)
+++||++||+|++|||||+||++||+|+++|+. +|++|++|+++|.++++++++. .+. .+|+.+...+.
T Consensus 216 ~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~------~g~~~~idl~~l~~~~~~~~~~~~~~----~~~~~~~~~~~ 285 (345)
T 1nvm_A 216 VEEGCDRVDASLAGMGAGAGNAPLEVFIAVAER------LGWNHGTDLYTLMDAADDIVRPLQDR----PVRVDRETLGL 285 (345)
T ss_dssp HHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHH------HTCBCCSCHHHHHHHHHHTTGGGCSS----CCSCCHHHHHH
T ss_pred HHcCCCEEEecchhccCCccCcCHHHHHHHHHh------cCCCCCCCHHHHHHHHHHHHHHHhcC----CCCCChHHHhe
Confidence 999999999999999999999999999999996 3788999999999999999875 322 35778888887
Q ss_pred eecccccccc
Q 007056 379 HESGIHQDGM 388 (620)
Q Consensus 379 h~sGiH~dgi 388 (620)
..+|+|++-.
T Consensus 286 ~~~G~~~~~~ 295 (345)
T 1nvm_A 286 GYAGVYSSFL 295 (345)
T ss_dssp HHHTCCTTHH
T ss_pred eccccchhHH
Confidence 7899887543
No 15
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=1e-52 Score=480.49 Aligned_cols=316 Identities=19% Similarity=0.190 Sum_probs=265.7
Q ss_pred CCCCCCCceEEEeCCCcccCCCCCCC-CCHHHHHHHHHHHhHcC--CCEEEEe--------cCCCChhHHHHHHHHHHHh
Q 007056 69 NRIPDPNYVRVFDTTLRDGEQSPGAT-LTSKEKLDIARQLAKLG--VDIIEAG--------FPAASKEDFEAVRTIAKEV 137 (620)
Q Consensus 69 ~~~~~~~~V~I~DtTLRDG~Qs~g~~-fs~~~Kl~Ia~~L~~~G--vd~IEvG--------fP~~s~~d~e~v~~i~~~~ 137 (620)
+|+.++++|+|+|||||||+|+++.. |++++|++|++.|+++| ++.||+| ||..++.+|++++.+.+.+
T Consensus 95 ~~~~~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~ 174 (718)
T 3bg3_A 95 RAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELI 174 (718)
T ss_dssp HHHHHCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHC
T ss_pred HHHhccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHc
Confidence 45555678999999999999999875 99999999999999995 5559999 5556677899999999886
Q ss_pred cccccccCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 138 GNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 138 ~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
++. .+++|.|+ ..++|++++++ |++.|++|.+.++ ++++.
T Consensus 175 ~~~---------~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~----Gvd~irIf~s~n~--------------l~~l~ 227 (718)
T 3bg3_A 175 PNI---------PFQMLLRGANAVGYTNYPDNVVFKFCEVAKEN----GMDVFRVFDSLNY--------------LPNML 227 (718)
T ss_dssp SSS---------CEEEEECGGGTTSSSCCCHHHHHHHHHHHHHH----TCCEEEEECSSCC--------------HHHHH
T ss_pred ccc---------hHHHHhcccccccccccCCcchHHHHHHHHhc----CcCEEEEEecHHH--------------HHHHH
Confidence 542 46777776 35667777765 9999999998874 45778
Q ss_pred HHHHHHHHcCCCEEEE----c--CCCCCCC--CHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCC
Q 007056 205 SMVKFARSLGCDDVEF----S--PEDAGRS--DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI 276 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f----~--~ed~~r~--d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~ 276 (620)
.+++++++.|.. |++ . .+|.+|. +++|+.++++++.++||++|+||||+|+++|.+++++|+.+++++|
T Consensus 228 ~~i~~ak~~G~~-v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p-- 304 (718)
T 3bg3_A 228 LGMEAAGSAGGV-VEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP-- 304 (718)
T ss_dssp HHHHHHHTTTSE-EEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST--
T ss_pred HHHHHHHHcCCe-EEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC--
Confidence 899999999964 443 3 2677776 9999999999999999999999999999999999999999999997
Q ss_pred CceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHH
Q 007056 277 ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKM 356 (620)
Q Consensus 277 ~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~ 356 (620)
+++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|+++++|+++|.+++++
T Consensus 305 -~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~~------~g~~tgidl~~L~~~s~~ 377 (718)
T 3bg3_A 305 -DLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRG------TPLDTEVPMERVFDYSEY 377 (718)
T ss_dssp -TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHH
T ss_pred -CCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHHh------cCCCcccCHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999996 378899999999999999
Q ss_pred HHHHhCCCCCCC--CcccCccceeeeccccccccccCCccccccCCcccCCcccccceEeeeccccHHHHHHHHHHcCCC
Q 007056 357 VEEYTGLHVQPH--KAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLKELGYE 434 (620)
Q Consensus 357 v~~~~g~~v~~~--~pivG~naF~h~sGiH~dgi~k~~~~Ye~i~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~~lG~~ 434 (620)
++++.+++.+.+ .+++|. +|+.+.++..| |+ .+++...|+++|+.
T Consensus 378 v~~~~~~~~~~~~~~~~~g~-------------------~~~v~~~e~pG-----------g~---~snl~~q~~~~G~~ 424 (718)
T 3bg3_A 378 WEGARGLYAAFDCTATMKSG-------------------NSDVYENEIPG-----------GQ---YTNLHFQAHSMGLG 424 (718)
T ss_dssp HHHHHHHTGGGCGGGTCCSC-------------------CTTHHHHCCCH-----------HH---HHHHHGGGTTTSCT
T ss_pred HHHHhCCCcCCcCCcccccc-------------------ccceeeccCcc-----------hH---HHHHHHHHHHcCCC
Confidence 999999987666 555553 33444445444 12 44889999999998
Q ss_pred CCHHHHHHHHHHHH-HHHHhc
Q 007056 435 LNDEQLGTIFWHFK-AVAEQK 454 (620)
Q Consensus 435 l~~~~~~~~~~~vk-~~a~~~ 454 (620)
...+++.+.+.+|+ ++++..
T Consensus 425 ~~~~~v~~~~~~v~~~lG~~~ 445 (718)
T 3bg3_A 425 SKFKEVKKAYVEANQMLGDLI 445 (718)
T ss_dssp THHHHHHHHHHHHHHHTTSCC
T ss_pred ccHHHHHHHHHHHHHHcCCCc
Confidence 77788888888888 454443
No 16
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=4.5e-51 Score=428.79 Aligned_cols=270 Identities=19% Similarity=0.240 Sum_probs=228.3
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhH----------HHHHHHHHHHhcccccccC
Q 007056 76 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKED----------FEAVRTIAKEVGNAVDAES 145 (620)
Q Consensus 76 ~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d----------~e~v~~i~~~~~~~~~~~~ 145 (620)
+|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||. +|.+ ++.++.|++ .++
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~~~~~~e~l~~i~~-~~~------ 73 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKFGYTPVSVLKHLRN-IST------ 73 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHHHHCCHHHHHHHHH-HCC------
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEeccc-CCccccccccccChHHHHHHHhh-ccC------
Confidence 5899999999999999999999999999999999999999999974 4433 688888877 433
Q ss_pred CccceEEeecccc---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 146 GYVPVICGLSRCN---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 146 ~l~~~i~~~~r~~---~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..+++|.|.. .+|++..+.+. .+|++.|.+|... | +++.+.++++++|++|++ |+|++
T Consensus 74 ---~~~~~L~r~~~~~~~dv~~~~~a~-~~Gvd~~ri~~~~---~-----------nle~~~~~v~~ak~~G~~-v~~~~ 134 (320)
T 3dxi_A 74 ---KKIAIMLNEKNTTPEDLNHLLLPI-IGLVDMIRIAIDP---Q-----------NIDRAIVLAKAIKTMGFE-VGFNV 134 (320)
T ss_dssp ---SEEEEEEEGGGCCGGGHHHHHGGG-TTTCSEEEEEECG---G-----------GHHHHHHHHHHHHTTTCE-EEEEE
T ss_pred ---CeEEEEecCCCCChhhHHHHHHhh-hcCCCEEEEEecH---H-----------HHHHHHHHHHHHHHCCCE-EEEEE
Confidence 3577777653 35787766654 3799999998643 2 378888999999999985 99998
Q ss_pred CCCCCCC-HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 223 EDAGRSD-RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 223 ed~~r~d-~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
++++++. ++++++.+.+ .++|++.|+||||+|+++|.+++++|+.++++++ ++|++|||||+|||+||+++|++
T Consensus 135 ~~~~~~~~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~----~~i~~H~Hn~~G~a~an~laA~~ 209 (320)
T 3dxi_A 135 MYMSKWAEMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH----VPVGFHGHDNLQLGLINSITAID 209 (320)
T ss_dssp CCTTTGGGSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC----SCEEEECBCTTSCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC----CeEEEEeCCCCccHHHHHHHHHH
Confidence 8877763 4334444444 4679999999999999999999999999999985 67999999999999999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeec
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHES 381 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~s 381 (620)
+||++||+|++|||||+||++||+|+++|+.. +.+++|++.|.+++++++++. +++++|.|+|.|+|
T Consensus 210 aGa~~vd~si~GlG~~~GN~~~E~lv~~L~~~-------~~~~~dl~~l~~~~~~~~~~~------~~~~~g~~~~~~~s 276 (320)
T 3dxi_A 210 DGIDFIDATITGMGRGAGNLKMELLLTYLNKH-------HGLNVDFNVLGNIITTFTPLL------EKYQWGTNLPYMLS 276 (320)
T ss_dssp TTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH-------SCCCCCHHHHHHHHHHHHHHH------HHHCCSCCHHHHHH
T ss_pred hCCCEEEEeccccCCcccchhHHHHHHHHHhc-------cCCCcCHHHHHHHHHHHHHHH------HhcCCCCchhhHHH
Confidence 99999999999999999999999999999962 347899999999999999875 67888888887765
Q ss_pred c---cccccccc
Q 007056 382 G---IHQDGMLK 390 (620)
Q Consensus 382 G---iH~dgi~k 390 (620)
| +||+++.+
T Consensus 277 g~~g~H~~~i~~ 288 (320)
T 3dxi_A 277 GANNIPQKEVMD 288 (320)
T ss_dssp HHTTCCHHHHHH
T ss_pred hccCCCHHHHHH
Confidence 5 99999844
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=8.6e-49 Score=471.42 Aligned_cols=306 Identities=20% Similarity=0.239 Sum_probs=258.9
Q ss_pred CCCCCCCceEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHhHcCCCE--EEE----ecCCC----ChhHHHHHHHHHHHh
Q 007056 69 NRIPDPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLGVDI--IEA----GFPAA----SKEDFEAVRTIAKEV 137 (620)
Q Consensus 69 ~~~~~~~~V~I~DtTLRDG~Qs~g~-~fs~~~Kl~Ia~~L~~~Gvd~--IEv----GfP~~----s~~d~e~v~~i~~~~ 137 (620)
+|+.++++|+|+|||||||+|+++. .|++++|++|++.|+++||++ ||+ |||.+ ++.+|++++.+.+.+
T Consensus 543 ~~~~~~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~ 622 (1165)
T 2qf7_A 543 EWMRNEKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGA 622 (1165)
T ss_dssp HHHHHCSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHC
T ss_pred HHhhcCCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHc
Confidence 4555568899999999999999987 699999999999999997665 998 67743 667899999999886
Q ss_pred cccccccCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 138 GNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 138 ~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
++. .+++|.|+ ..++|++++++ |++.+++|.+.++ ++++.
T Consensus 623 ~~~---------~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~----g~d~irif~sl~~--------------~~~~~ 675 (1165)
T 2qf7_A 623 PNL---------LLQMLLRGANGVGYTNYPDNVVKYFVRQAAKG----GIDLFRVFDCLNW--------------VENMR 675 (1165)
T ss_dssp TTS---------EEEEEEETTTBTCSSCCCHHHHHHHHHHHHHH----TCCEEEEECTTCC--------------GGGGH
T ss_pred hhh---------HHHHHhccccccccccCCchhHHHHHHHHHhc----CcCEEEEEeeHHH--------------HHHHH
Confidence 542 45666553 35678888776 8999999998764 45777
Q ss_pred HHHHHHHHcCCCEEEE----c--CCCCCC--CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCC
Q 007056 205 SMVKFARSLGCDDVEF----S--PEDAGR--SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI 276 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f----~--~ed~~r--~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~ 276 (620)
.+++++++.|.. |++ . .+|.+| ++++|+.++++++.++||++|+||||+|+++|.+++++|+.+++++
T Consensus 676 ~~i~~~~~~g~~-v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~--- 751 (1165)
T 2qf7_A 676 VSMDAIAEENKL-CEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT--- 751 (1165)
T ss_dssp HHHHHHHHTTCE-EEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHhccce-EEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc---
Confidence 899999999964 443 2 468888 9999999999999999999999999999999999999999999998
Q ss_pred CceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHH
Q 007056 277 ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKM 356 (620)
Q Consensus 277 ~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~ 356 (620)
+++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|+++++|++.|.+++++
T Consensus 752 -~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~------~g~~tgidl~~L~~~s~~ 824 (1165)
T 2qf7_A 752 -GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEALSG------SERDPGLDPAWIRRISFY 824 (1165)
T ss_dssp -SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHH
T ss_pred -CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHHHh------cCCCccccHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999999996 378899999999999999
Q ss_pred HHHHhCCCCCCCCcccCccceeeeccccccccccCCccccccCCcccCCcccccceEeeecccc--HHHHHHHHHHcCCC
Q 007056 357 VEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKELGYE 434 (620)
Q Consensus 357 v~~~~g~~v~~~~pivG~naF~h~sGiH~dgi~k~~~~Ye~i~Pe~vG~~r~~~~~i~lg~~SG--~~~i~~~l~~lG~~ 434 (620)
++++.+.. .|+.|+.+|..+ ++......| .+++...++++|+.
T Consensus 825 ~~~~~~~~-------------------------------~~~~~~~~~~~~----~v~~~~~pGG~~snl~~q~~~~g~~ 869 (1165)
T 2qf7_A 825 WEAVRNQY-------------------------------AAFESDLKGPAS----EVYLHEMPGGQFTNLKEQARSLGLE 869 (1165)
T ss_dssp HHHHHGGG-------------------------------GGGCCCCCSCCT----THHHHCCCHHHHHHHHHHHHHTTCG
T ss_pred HHHHhhhc-------------------------------cCCCCCccCCcc----ceEeccCCCccHHHHHHHHHHcCCc
Confidence 99999874 223366677654 366677777 88999999999986
Q ss_pred CCHHHHHHHHHHHHHH
Q 007056 435 LNDEQLGTIFWHFKAV 450 (620)
Q Consensus 435 l~~~~~~~~~~~vk~~ 450 (620)
+.+.++++++++.
T Consensus 870 ---~~~~~v~~~~~~v 882 (1165)
T 2qf7_A 870 ---TRWHQVAQAYADA 882 (1165)
T ss_dssp ---GGHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHH
Confidence 4556666666665
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=1e-44 Score=435.23 Aligned_cols=259 Identities=17% Similarity=0.176 Sum_probs=227.5
Q ss_pred CCCCCCCceEEEeCCCcccCCCCCCC-CCHHHHHHHHHHHhHc--CCCEEEE--------ecCCCChhHHHHHHHHHHHh
Q 007056 69 NRIPDPNYVRVFDTTLRDGEQSPGAT-LTSKEKLDIARQLAKL--GVDIIEA--------GFPAASKEDFEAVRTIAKEV 137 (620)
Q Consensus 69 ~~~~~~~~V~I~DtTLRDG~Qs~g~~-fs~~~Kl~Ia~~L~~~--Gvd~IEv--------GfP~~s~~d~e~v~~i~~~~ 137 (620)
.|+.++++|+|+|||||||+|++++. |++++|++|++.|+++ |+..||+ |+|..++++|+.++.+++.+
T Consensus 525 ~~~~~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~ 604 (1150)
T 3hbl_A 525 EWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAI 604 (1150)
T ss_dssp HHHTTCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHC
T ss_pred HHHHhCCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhC
Confidence 57778889999999999999999886 9999999999999999 8888887 36888889999999999876
Q ss_pred cccccccCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 138 GNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 138 ~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
++ ..+++|.|+ .+++++++++ +|++.|++|.++|++|+..+
T Consensus 605 ~~---------~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~----~Gvd~irif~~~sd~~~~~~------------- 658 (1150)
T 3hbl_A 605 PN---------VLFQMLLRASNAVGYKNYPDNVIHKFVQESAK----AGIDVFRIFDSLNWVDQMKV------------- 658 (1150)
T ss_dssp CS---------SEEEEEEETTTBTCSSCCCHHHHHHHHHHHHH----TTCCEEEEECTTCCGGGGHH-------------
T ss_pred CC---------CeEEEEeccccccccccCCchhHHHHHHHHHh----CCcCEEEEEeeCCHHHHHHH-------------
Confidence 54 357888887 4455665555 59999999999999887543
Q ss_pred HHHHHHHHcCCCE---EE-----EcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCC
Q 007056 205 SMVKFARSLGCDD---VE-----FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI 276 (620)
Q Consensus 205 ~~v~~a~~~G~~~---V~-----f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~ 276 (620)
+++.+++.|... ++ |+||++++++++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++++
T Consensus 659 -~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~--- 734 (1150)
T 3hbl_A 659 -ANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV--- 734 (1150)
T ss_dssp -HHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC---
T ss_pred -HHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc---
Confidence 445556667531 22 467788999999999999999999999999999999999999999999999997
Q ss_pred CceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHH
Q 007056 277 ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKM 356 (620)
Q Consensus 277 ~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~ 356 (620)
+++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|++|++|+++|.+++++
T Consensus 735 -~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~~lE~lv~~L~~------~g~~tgidl~~l~~~~~~ 807 (1150)
T 3hbl_A 735 -DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNG------FPRHLRTDIEGMESLSHY 807 (1150)
T ss_dssp -CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHTTT------SSCCBCSCHHHHHHHHHH
T ss_pred -CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCccHHHHHHHHHh------cCCCcCccHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999999986 378899999999999999
Q ss_pred HHHHhCCC
Q 007056 357 VEEYTGLH 364 (620)
Q Consensus 357 v~~~~g~~ 364 (620)
++++.+.-
T Consensus 808 ~~~~~~~y 815 (1150)
T 3hbl_A 808 WSTVRTYY 815 (1150)
T ss_dssp HHHHHGGG
T ss_pred HHHHHhhh
Confidence 99998853
No 19
>3f6g_B Alpha-isopropylmalate synthase; licmsc, allosteric regulation, feedback inhibition, selectivity, specificity, transferase; 2.00A {Leptospira interrogans} PDB: 3f6h_A
Probab=99.96 E-value=3.3e-28 Score=222.79 Aligned_cols=119 Identities=24% Similarity=0.286 Sum_probs=104.2
Q ss_pred eEEEeeEEEEeccCCeeEEEEEEEccCCeEEEEEEEeCCHHHHHHHHHHHhhcC----CceeeeeeeeecCCC-CCceEE
Q 007056 476 VWKLLDMQVTCGTLGLSTATVKLMDANGEEHVACSTGTGPVDSAYKAVDLIVKE----PATLLEYSMNAVTAG-IDAIAT 550 (620)
Q Consensus 476 ~~~L~~~~v~~g~~~~~~AtV~l~~~dG~~~~~~a~G~GPVdA~~~AL~~~~~~----~~~L~dY~v~av~~G-~dA~a~ 550 (620)
.|+|.+|+|.+++...++|+|+|. ++|++++.+++|||||||+++||+++++. +++|.||++|++++| +||+++
T Consensus 2 ~~~L~~~~v~~~~~~~~~a~v~l~-~~g~~~~~~a~GnGPVdA~~~Al~~~~~~~~~~~~~L~dY~v~al~~G~tdA~a~ 80 (127)
T 3f6g_B 2 VLTIKSCNIHSGIGIRPHAQIELE-YQGKIHKEISEGDGGYDAFMNALTKITNRLGISIPKLIDYEVRIPPGGKTDALVE 80 (127)
T ss_dssp CEEEEEEEEEECTTSCCEEEEEEE-ETTEEEEEEEECSSHHHHHHHHHHHHHHHHTCCCCEEEEEEEECCSSCCTTCCEE
T ss_pred eEEEEEEEEEECCCCceEEEEEEE-ECCEEEEEEEEccCHHHHHHHHHHHHhCccccCceEEEEEEEEcCCCCCCceEEE
Confidence 699999999998877899999998 79999999999999999999999999987 799999999999999 999999
Q ss_pred EEEEEEeccCCcccccCCCcccCceEEEEeecccHHHHHHHHHHHHHHhhhccc
Q 007056 551 TRVLIRGEKSQLSTHASTGETVQRTFSGTGAGMDIVVSSVKAYIGALNKMLGFK 604 (620)
Q Consensus 551 ~~V~i~~~~~~~~~~~~~g~~~~~~~~g~G~~~DIi~AS~~A~i~A~N~l~~~~ 604 (620)
++|+++..+. ..++++|||+|+|+||++||++||++|+||++...
T Consensus 81 v~V~~~~~~~---------~~~g~~~~G~Gv~~DIi~AS~~A~~~alNr~~~~~ 125 (127)
T 3f6g_B 81 TRITWNKSLD---------LEEDQTFKTMGVHPDQTVAAVHATEKMLNQILQPW 125 (127)
T ss_dssp EEEEEEC-----------------CEEEEEEESSHHHHHHHHHHHHHHHHTC--
T ss_pred EEEEEEEccc---------cCCCcEEEEEEeCcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999984100 00368999999999999999999999999998743
No 20
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.80 E-value=5e-08 Score=99.45 Aligned_cols=177 Identities=16% Similarity=0.133 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-----H-----------------HHHHHHHHHHhcccccccCCccceEE
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-----D-----------------FEAVRTIAKEVGNAVDAESGYVPVIC 152 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-----d-----------------~e~v~~i~~~~~~~~~~~~~l~~~i~ 152 (620)
.+.++++++++.|.+.|+|.||+|+|.+.|- - ++.++.+.+..++ .|.+.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--------~Pi~~ 99 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD--------IPFLL 99 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--------SCEEE
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC--------CCEEE
Confidence 5678899999999999999999999986542 1 2335555543211 13222
Q ss_pred --eecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Q 007056 153 --GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 230 (620)
Q Consensus 153 --~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~ 230 (620)
-|.+.-.-+++..++....+|++.+.+. |+ .. +.+.+.++.++++|+..+.+..+ .++.
T Consensus 100 m~y~n~v~~~g~~~f~~~~~~aG~dgvii~----dl--------~~----ee~~~~~~~~~~~gl~~i~l~~p---~t~~ 160 (262)
T 2ekc_A 100 MTYYNPIFRIGLEKFCRLSREKGIDGFIVP----DL--------PP----EEAEELKAVMKKYVLSFVPLGAP---TSTR 160 (262)
T ss_dssp ECCHHHHHHHCHHHHHHHHHHTTCCEEECT----TC--------CH----HHHHHHHHHHHHTTCEECCEECT---TCCH
T ss_pred EecCcHHHHhhHHHHHHHHHHcCCCEEEEC----CC--------CH----HHHHHHHHHHHHcCCcEEEEeCC---CCCH
Confidence 1121112234555566667799976552 22 22 45677889999999853433332 3667
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccccCHHH---HHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGITMPTE---FGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+.+.++++.+.. -+..+.+++++|..+|.. +.++++.+++.. + ++|.+ ++|...++...++.+||+.|
T Consensus 161 ~rl~~ia~~a~g-fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~---~pv~v----G~GI~t~e~~~~~~~gADgv 231 (262)
T 2ekc_A 161 KRIKLICEAADE-MTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-D---KPVVV----GFGVSKKEHAREIGSFADGV 231 (262)
T ss_dssp HHHHHHHHHCSS-CEEEESSCC---------CHHHHHHHHHHHHHC-C---SCEEE----ESSCCSHHHHHHHHTTSSEE
T ss_pred HHHHHHHHhCCC-CEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-C---CCEEE----eCCCCCHHHHHHHHcCCCEE
Confidence 777777766422 245667789999998855 889999999976 2 45665 78998899999999999876
No 21
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.33 E-value=4.2e-06 Score=85.67 Aligned_cols=174 Identities=18% Similarity=0.226 Sum_probs=108.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceEEe
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVICG 153 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i~~ 153 (620)
+.+.-+++++.|.+.|+|.||+|.|.+.|- | ++.++++.+... . .|.+ .
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~-~-------~Piv-l 102 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP-E-------TPIG-L 102 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T-------SCEE-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C-------CCEE-E
Confidence 567789999999999999999999987652 1 244555544310 1 1322 2
Q ss_pred ecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Q 007056 154 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 230 (620)
Q Consensus 154 ~~r~~~---~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~ 230 (620)
++=.+. -++++.++..+++|++.+-+. | ...+ .+.+.++.++++|++.+.+.+ ..++.
T Consensus 103 m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip----D--------lp~e----e~~~~~~~~~~~gl~~I~lva---p~t~~ 163 (271)
T 3nav_A 103 LMYANLVYARGIDDFYQRCQKAGVDSVLIA----D--------VPTN----ESQPFVAAAEKFGIQPIFIAP---PTASD 163 (271)
T ss_dssp EECHHHHHHTCHHHHHHHHHHHTCCEEEET----T--------SCGG----GCHHHHHHHHHTTCEEEEEEC---TTCCH
T ss_pred EecCcHHHHHhHHHHHHHHHHCCCCEEEEC----C--------CCHH----HHHHHHHHHHHcCCeEEEEEC---CCCCH
Confidence 222222 245666666666799987653 2 1222 366788999999986443432 24566
Q ss_pred HHHHHHHHHHHHcC-CcEEeecCCcccc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHH-HHHhcCcE
Q 007056 231 KFLYEILGEVIKVG-ATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGARQ 306 (620)
Q Consensus 231 e~l~~~~~~~~~aG-a~~I~L~DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla-Av~aGA~~ 306 (620)
+.+.++.+... | +..+.+.+++|.. .|..+.++++.+|+... +|+.+ .+|....+... ++.+||+.
T Consensus 164 eri~~i~~~~~--gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~~~~~~~~gADg 233 (271)
T 3nav_A 164 ETLRAVAQLGK--GYTYLLSRAGVTGAETKANMPVHALLERLQQFDA----PPALL----GFGISEPAQVKQAIEAGAAG 233 (271)
T ss_dssp HHHHHHHHHCC--SCEEECCCC--------CCHHHHHHHHHHHHTTC----CCEEE----CSSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCC--CeEEEEeccCCCCcccCCchhHHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCCCE
Confidence 66666555421 2 3445567888876 47889999999998762 45555 67777677777 99999988
Q ss_pred E
Q 007056 307 V 307 (620)
Q Consensus 307 V 307 (620)
|
T Consensus 234 v 234 (271)
T 3nav_A 234 A 234 (271)
T ss_dssp E
T ss_pred E
Confidence 6
No 22
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.15 E-value=9.5e-06 Score=82.74 Aligned_cols=178 Identities=17% Similarity=0.189 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceE
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVI 151 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i 151 (620)
.++.++.+++++.|.+.|+|.||+|.|.+.|- | ++.++.+.+...+ .|.+
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--------~Pv~ 98 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT--------IPIG 98 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS--------SCEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--------CCEE
Confidence 46678899999999999999999999986552 1 2345555543101 1322
Q ss_pred E-e-ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Q 007056 152 C-G-LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 229 (620)
Q Consensus 152 ~-~-~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d 229 (620)
. + +.+.-.-.++..++.+..+|++.+.+..-. .+.+.+.++.++++|++.+.+..+ .++
T Consensus 99 lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~----------------~e~~~~~~~~~~~~g~~~i~l~~p---~t~ 159 (268)
T 1qop_A 99 LLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP----------------VEESAPFRQAALRHNIAPIFICPP---NAD 159 (268)
T ss_dssp EEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC----------------GGGCHHHHHHHHHTTCEEECEECT---TCC
T ss_pred EEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC----------------HHHHHHHHHHHHHcCCcEEEEECC---CCC
Confidence 1 1 221111122344444445588877653211 134557788999999863433322 266
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccccCH--HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHH-HHhcCcE
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG-ACAGARQ 306 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaA-v~aGA~~ 306 (620)
.+.+.++++..... +..+.+..+.|..+| ....++++.+++.. +++|.+ ++|...++.... +.+||+.
T Consensus 160 ~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~----~~pi~v----ggGI~t~e~~~~~~~agAD~ 230 (268)
T 1qop_A 160 DDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH----AAPALQ----GFGISSPEQVSAAVRAGAAG 230 (268)
T ss_dssp HHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT----CCCEEE----ESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc----CCcEEE----ECCCCCHHHHHHHHHcCCCE
Confidence 67776666553211 234456678888554 55778899999865 245665 788885555544 9999988
Q ss_pred E
Q 007056 307 V 307 (620)
Q Consensus 307 V 307 (620)
|
T Consensus 231 v 231 (268)
T 1qop_A 231 A 231 (268)
T ss_dssp E
T ss_pred E
Confidence 6
No 23
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.14 E-value=1.3e-05 Score=81.87 Aligned_cols=174 Identities=18% Similarity=0.234 Sum_probs=108.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceEE
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVIC 152 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i~ 152 (620)
.+.+.-+++++.|.+.|+|.||+|.|.+.|- | ++.++++.+... . .| +.
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-~-------~P-iv 99 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-D-------MP-IG 99 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T-------CC-EE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C-------CC-EE
Confidence 4677789999999999999999999876551 1 344455444300 1 13 22
Q ss_pred eecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCC
Q 007056 153 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRS 228 (620)
Q Consensus 153 ~~~r~~~---~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~ 228 (620)
.++=.++ -++++.++..+++|++.+-+. |+ .. +...+.++.++++|++.+.+ .| .+
T Consensus 100 lm~Y~npv~~~g~e~f~~~~~~aGvdgvii~----Dl--------p~----ee~~~~~~~~~~~gl~~i~liaP----~t 159 (267)
T 3vnd_A 100 LLLYANLVFANGIDEFYTKAQAAGVDSVLIA----DV--------PV----EESAPFSKAAKAHGIAPIFIAPP----NA 159 (267)
T ss_dssp EEECHHHHHHHCHHHHHHHHHHHTCCEEEET----TS--------CG----GGCHHHHHHHHHTTCEEECEECT----TC
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEeC----CC--------CH----hhHHHHHHHHHHcCCeEEEEECC----CC
Confidence 2222232 245666666666799987653 11 11 23667889999999864433 33 45
Q ss_pred CHHHHHHHHHHHHHcC-CcEEeecCCcccc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHH-HHHhcC
Q 007056 229 DRKFLYEILGEVIKVG-ATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGA 304 (620)
Q Consensus 229 d~e~l~~~~~~~~~aG-a~~I~L~DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla-Av~aGA 304 (620)
+.+.+..+++... | +..+.+..++|.. .|.++.++++.+|+.. ++|+.+ ++|....+... ++.+||
T Consensus 160 ~~eri~~i~~~~~--gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~----~~pv~v----GfGI~~~e~~~~~~~~gA 229 (267)
T 3vnd_A 160 DADTLKMVSEQGE--GYTYLLSRAGVTGTESKAGEPIENILTQLAEFN----APPPLL----GFGIAEPEQVRAAIKAGA 229 (267)
T ss_dssp CHHHHHHHHHHCC--SCEEESCCCCCC--------CHHHHHHHHHTTT----CCCEEE----CSSCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCC--CcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc----CCCEEE----ECCcCCHHHHHHHHHcCC
Confidence 6666665554321 2 3444567778876 3777899999999875 245665 67877677777 999999
Q ss_pred cEE
Q 007056 305 RQV 307 (620)
Q Consensus 305 ~~V 307 (620)
+.|
T Consensus 230 Dgv 232 (267)
T 3vnd_A 230 AGA 232 (267)
T ss_dssp SEE
T ss_pred CEE
Confidence 886
No 24
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.09 E-value=0.00026 Score=74.37 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=144.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChh------H-HHHHHHHHHHhcccccccCCccceEEeecccchhhHHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKE------D-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 165 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~------d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 165 (620)
..++.++.++.++.+.+.|++.|-+... ..|. + .+.++.+.+..+ +...+ ..+... +..
T Consensus 89 ~~ls~eei~~~~~~~~~~G~~~i~l~gG-e~p~~~~~~~~~~~l~~~ik~~~~--------i~i~~-s~g~~~----~e~ 154 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKGAGFHMVDLTMG-EDPYYYEDPNRFVELVQIVKEELG--------LPIMI-SPGLMD----NAT 154 (350)
T ss_dssp CBCCHHHHHHHHHHHTTSCCSEEEEEEC-CCHHHHHSTHHHHHHHHHHHHHHC--------SCEEE-ECSSCC----HHH
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEeeC-CCCccccCHHHHHHHHHHHHhhcC--------ceEEE-eCCCCC----HHH
Confidence 3589999999999999999998876332 1232 1 244444443321 11111 111122 233
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
++.++.+|++++.+.+-+.+-....++++. ...+...++++.+++.|+. |..+...+..-+++.+.+.++.+.+.++
T Consensus 155 l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~-v~~~~i~Glget~e~~~~~l~~l~~l~~ 231 (350)
T 3t7v_A 155 LLKAREKGANFLALYQETYDTELYRKLRVG--QSFDGRVNARRFAKQQGYC-VEDGILTGVGNDIESTILSLRGMSTNDP 231 (350)
T ss_dssp HHHHHHTTEEEEECCCBCSCHHHHHHHSTT--CCHHHHHHHHHHHHHHTCE-EEEEEEESSSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEEeeecCCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCe-EccceEeecCCCHHHHHHHHHHHHhCCC
Confidence 456777899888876665533444445432 2245566788999999985 6654444444567888899999999998
Q ss_pred cEEee------cCCc----cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc-
Q 007056 246 TTLNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI- 314 (620)
Q Consensus 246 ~~I~L------~DTv----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl- 314 (620)
+.+.+ ++|- ...+++++.++++.+|-.+|+. .++.+++ .++......|+.+||+-+.+++..-
T Consensus 232 ~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~-~I~a~~~-----~~g~~~~~~~l~~Gan~~~~~~~~~~ 305 (350)
T 3t7v_A 232 DMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKR-LIPASLD-----LEGIDGMVLRLNAGANIVTSILPPDS 305 (350)
T ss_dssp SEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTS-BCEEEHH-----HHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCc-Ccccccc-----ccChhHHHHHHhcCCceecCCCCCCC
Confidence 86654 3442 2356778999999999889875 4666544 3445678899999999999998765
Q ss_pred ---cCCc-------CcccHHHHHHHHHhcc
Q 007056 315 ---GERA-------GNASLEEVVMAFKCRG 334 (620)
Q Consensus 315 ---GERa-------GNa~lEevv~~L~~~~ 334 (620)
|-.. ++.+.++++..++..|
T Consensus 306 ~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G 335 (350)
T 3t7v_A 306 QLEGVANYDRDLEERDRDIKSVVRRLEIMG 335 (350)
T ss_dssp CCCCSSCTTTTCSSCCCCHHHHHHHHHHHT
T ss_pred CCCCCCCCcccchhccCCHHHHHHHHHHcC
Confidence 2221 2468899999888754
No 25
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.76 E-value=9.3e-05 Score=72.00 Aligned_cols=175 Identities=18% Similarity=0.116 Sum_probs=104.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
..+.++.+++++.|. -|+|.||+|+|.+...-++.++.+++...+. +..+.+.-.. ..+..++....+|
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~~~~~--------~i~~~~~~~~--~~~~~~~~~~~~G 77 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEKYPHK--------EVLADAKIMD--GGHFESQLLFDAG 77 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHHCTTS--------EEEEEEEECS--CHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHhCCCC--------EEEEEEEecc--chHHHHHHHHhcC
Confidence 357899999999997 5999999999753333356788877652111 2222211111 1122233444569
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec-C
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP-D 252 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~-D 252 (620)
++.|.+.....+ +.+.+++++++++|.. +.+.. ....+ ..+.++.+.+.|++.|++- .
T Consensus 78 ad~v~v~~~~~~---------------~~~~~~~~~~~~~g~~-~~v~~--~~~~t---~~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 78 ADYVTVLGVTDV---------------LTIQSCIRAAKEAGKQ-VVVDM--ICVDD---LPARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp CSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEEC--TTCSS---HHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEEeCCCCh---------------hHHHHHHHHHHHcCCe-EEEEe--cCCCC---HHHHHHHHHHcCCCEEEEcCC
Confidence 999877543221 3345778888889975 44321 01122 2355677788999988763 1
Q ss_pred CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 253 TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 253 TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
..|...+....+.++.+++.+++ +++.+ +.|....|...++++||+.|
T Consensus 137 ~~g~~~~~~~~~~i~~l~~~~~~---~~i~~----~gGI~~~~~~~~~~~Gad~v 184 (211)
T 3f4w_A 137 TDQQAAGRKPIDDLITMLKVRRK---ARIAV----AGGISSQTVKDYALLGPDVV 184 (211)
T ss_dssp HHHHHTTCCSHHHHHHHHHHCSS---CEEEE----ESSCCTTTHHHHHTTCCSEE
T ss_pred CcccccCCCCHHHHHHHHHHcCC---CcEEE----ECCCCHHHHHHHHHcCCCEE
Confidence 11111111134677778877653 45544 45665678888999999986
No 26
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.57 E-value=0.00044 Score=69.85 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=102.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCCh---------------------h-HHHHHHHHHHHhcccccccCCccceEE
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASK---------------------E-DFEAVRTIAKEVGNAVDAESGYVPVIC 152 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---------------------~-d~e~v~~i~~~~~~~~~~~~~l~~~i~ 152 (620)
++.++.+++++.|.+.|+|.||+|.|.+.| + -++.++++.+.. + .|.+
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-----~----~Pv~- 98 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-----S----CPVV- 98 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-----S----SCEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-----C----CCEE-
Confidence 345889999999999999999999987533 1 123344443321 1 2322
Q ss_pred eecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCC
Q 007056 153 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRS 228 (620)
Q Consensus 153 ~~~r~~~---~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~ 228 (620)
.+.+.+. .+++.+ ..+|++.|++..-. ++.+.+.++.++++|++.+.+ +| .+
T Consensus 99 ~m~~~~~~~~~~~~~a----~~aGadgv~v~d~~----------------~~~~~~~~~~~~~~g~~~i~~~a~----~t 154 (262)
T 1rd5_A 99 LLSYYKPIMFRSLAKM----KEAGVHGLIVPDLP----------------YVAAHSLWSEAKNNNLELVLLTTP----AI 154 (262)
T ss_dssp EECCSHHHHSCCTHHH----HHTTCCEEECTTCB----------------TTTHHHHHHHHHHTTCEECEEECT----TS
T ss_pred EEecCcHHHHHHHHHH----HHcCCCEEEEcCCC----------------hhhHHHHHHHHHHcCCceEEEECC----CC
Confidence 2333332 234443 34599988763211 123567788899999863332 33 35
Q ss_pred CHHHHHHHHHHHHHcCCcEE---eecCCccc--cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHh
Q 007056 229 DRKFLYEILGEVIKVGATTL---NIPDTVGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACA 302 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I---~L~DTvG~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~a 302 (620)
+.+.+..+.+ .+.+.+ .++.+.|. ..|....++++.+++..+ ++|.+ +.|.. ..|....+.+
T Consensus 155 ~~e~~~~~~~----~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~----~pI~v----gGGI~~~e~~~~~~~~ 222 (262)
T 1rd5_A 155 PEDRMKEITK----ASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN----KPVAV----GFGISKPEHVKQIAQW 222 (262)
T ss_dssp CHHHHHHHHH----HCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHHHHHHT
T ss_pred CHHHHHHHHh----cCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC----CeEEE----ECCcCCHHHHHHHHHc
Confidence 5555544443 333333 23455565 334567789999998752 45665 78888 6677777788
Q ss_pred cCcEEe
Q 007056 303 GARQVE 308 (620)
Q Consensus 303 GA~~Vd 308 (620)
||+.|-
T Consensus 223 GAdgvv 228 (262)
T 1rd5_A 223 GADGVI 228 (262)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 999875
No 27
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.41 E-value=0.00034 Score=70.71 Aligned_cols=174 Identities=10% Similarity=0.079 Sum_probs=104.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh-H----HH-------------HHHHHHHHhcccccccCCccc-eEEeecc
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D----FE-------------AVRTIAKEVGNAVDAESGYVP-VICGLSR 156 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d----~e-------------~v~~i~~~~~~~~~~~~~l~~-~i~~~~r 156 (620)
+.+.-+++++.|.+.|+|.||+|+|.+.|- | .+ .+-.+.+.+... .| .+.++..
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-------~Pivlm~Y~N 98 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-------KALVFMVYYN 98 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-------SEEEEECCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-------CCEEEEeccC
Confidence 678889999999999999999999987652 1 11 111111222111 23 2223322
Q ss_pred cc-hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 007056 157 CN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 235 (620)
Q Consensus 157 ~~-~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~ 235 (620)
.. .-++++.++..+++|++.+-+.. ... +...+..+.++++|++.|.+.+. .++.+.+.+
T Consensus 99 ~i~~~G~e~F~~~~~~aGvdG~IipD------------LP~----eE~~~~~~~~~~~Gl~~I~lvaP---~t~~eRi~~ 159 (252)
T 3tha_A 99 LIFSYGLEKFVKKAKSLGICALIVPE------------LSF----EESDDLIKECERYNIALITLVSV---TTPKERVKK 159 (252)
T ss_dssp HHHHHCHHHHHHHHHHTTEEEEECTT------------CCG----GGCHHHHHHHHHTTCEECEEEET---TSCHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeCC------------CCH----HHHHHHHHHHHHcCCeEEEEeCC---CCcHHHHHH
Confidence 11 34677777777888988765431 122 23567788899999875444322 355566655
Q ss_pred HHHHHHHcCCcEEeec---CCccccC--HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 236 ILGEVIKVGATTLNIP---DTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~---DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+++ .+-.-|++. -++|... +.++.++++.+|+... +|+.+ .+|........++..+|+.|
T Consensus 160 ia~----~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 160 LVK----HAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTN----LPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp HHT----TCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC----SCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred HHH----hCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcC----CcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 544 332334444 5667654 3457889999998752 34444 35666666666676677665
No 28
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.16 E-value=0.049 Score=57.36 Aligned_cols=215 Identities=17% Similarity=0.139 Sum_probs=133.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCChhHHHHHHHHHHHhcccccccCCccceEEe-ecccchhhHHHHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWE 167 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~e 167 (620)
..++.++.++.++.+.+.|++.|-+|. |.. .+.+.+..+.+.+... ++ .++. .+-..+ ..++
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~-----g~--~i~~t~G~l~~----e~l~ 163 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHE--RDMPYLEQMVQGVKAM-----GL--EACMTLGTLSE----SQAQ 163 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT--TTHHHHHHHHHHHHHT-----TS--EEEEECSSCCH----HHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc--CCHHHHHHHHHHHHHc-----CC--eEEEecCCCCH----HHHH
Confidence 458999999999999999999888753 432 2334444444333211 11 2321 111122 2345
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC--
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-- 244 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG-- 244 (620)
.++.+|++++.+-+-+++-..+..-+ .+ .+.+.+.++.+++.|+. |.....-+...+.+.+.+.++.+.+.+
T Consensus 164 ~L~~aGvd~v~i~les~~e~~~~i~~~~~----~~~~l~~i~~a~~~Gi~-v~~~~I~Gl~et~ed~~~~l~~l~~l~~~ 238 (369)
T 1r30_A 164 RLANAGLDYYNHNLDTSPEFYGNIITTRT----YQERLDTLEKVRDAGIK-VCSGGIVGLGETVKDRAGLLLQLANLPTP 238 (369)
T ss_dssp HHHHHCCCEEECCCBSCHHHHHHHCCSSC----HHHHHHHHHHHHHHHCE-EECCEEECSSCCHHHHHHHHHHHHSSSSC
T ss_pred HHHHCCCCEEeecCcCCHHHHHHhCCCCC----HHHHHHHHHHHHHcCCe-eeeeeEeeCCCCHHHHHHHHHHHHhhcCC
Confidence 56667999999887776654443333 24 45566778888888874 654443333456788889999998887
Q ss_pred CcEEee------cCC----ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc
Q 007056 245 ATTLNI------PDT----VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 314 (620)
Q Consensus 245 a~~I~L------~DT----vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl 314 (620)
++.+.+ ++| .....++++.+++..++..+|.. .+.+..=..| ++-.....++.+||+.+ +.
T Consensus 239 ~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~-~i~i~~~~~~---l~~~~~~~~l~~Gan~~---~~-- 309 (369)
T 1r30_A 239 PESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS-YVRLSAGREQ---MNEQTQAMCFMAGANSI---FY-- 309 (369)
T ss_dssp CSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS-EEEEESSGGG---SCHHHHHHHHHHTCCEE---EC--
T ss_pred CCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC-ceEeecchhh---cChHHHHHHhhCCCceE---Ee--
Confidence 666543 444 12356788999999999988852 1333321121 22334567899999943 33
Q ss_pred cCC---cCcccHHHHHHHHHhcc
Q 007056 315 GER---AGNASLEEVVMAFKCRG 334 (620)
Q Consensus 315 GER---aGNa~lEevv~~L~~~~ 334 (620)
|+| ++|.+.++.+..++..|
T Consensus 310 g~~~~t~~~~~~~~~~~~i~~~g 332 (369)
T 1r30_A 310 GCKLLTTPNPEEDKDLQLFRKLG 332 (369)
T ss_dssp SSBSSSSBCCCHHHHHHHHHHTT
T ss_pred CCeeeCCCCCCHHHHHHHHHHcC
Confidence 443 47788888888887644
No 29
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=96.77 E-value=0.056 Score=56.04 Aligned_cols=190 Identities=19% Similarity=0.102 Sum_probs=120.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe--c-CCCChhH-HHHHHHHHHHhcccccccCCccceEE-eecccchhhHHHHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAG--F-PAASKED-FEAVRTIAKEVGNAVDAESGYVPVIC-GLSRCNERDIKTAWEA 168 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvG--f-P~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~-~~~r~~~~dI~~a~ea 168 (620)
.++.++.++.++.+.+.|++.|-+. - |....++ .+.++.+.+. ++ .++ ..+...++.+ +.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~---------~~--~i~~s~g~l~~e~l----~~ 147 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM---------GV--AVTLSLGEWPREYY----EK 147 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT---------SC--EEEEECCCCCHHHH----HH
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc---------Cc--eEEEecCCCCHHHH----HH
Confidence 4799999999999999999987764 2 3322222 2334443332 11 222 1222233333 44
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHcCCcE
Q 007056 169 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 169 l~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~-r~d~e~l~~~~~~~~~aGa~~ 247 (620)
++.+|++.+.+.+-+.+-....+++... ..+...+.++.+++.|+. +......+. ..+.+.+.+.++.+.+.|++.
T Consensus 148 L~~ag~~~v~i~let~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~-v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~ 224 (348)
T 3iix_A 148 WKEAGADRYLLRHETANPVLHRKLRPDT--SFENRLNCLLTLKELGYE-TGAGSMVGLPGQTIDDLVDDLLFLKEHDFDM 224 (348)
T ss_dssp HHHHTCCEEECCCBCSCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCE-EEECBEESCTTCCHHHHHHHHHHHHHHTCSE
T ss_pred HHHhCCCEEeeeeeeCCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCe-eccceEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 5556999998876666333334444322 456677788999999985 666554343 467888999999999999886
Q ss_pred Eee------cCCc----cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch---HHHHHHHHHHhcCcEEe
Q 007056 248 LNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL---STANTIAGACAGARQVE 308 (620)
Q Consensus 248 I~L------~DTv----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl---AvANslaAv~aGA~~Vd 308 (620)
+.+ ++|- ....++++.++++.+|..+|.. .+++ ..++ +......|+.+||+.|-
T Consensus 225 i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~-~i~~------~~~~~~~~~~~~~~~l~~Gan~i~ 291 (348)
T 3iix_A 225 VGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDS-NIPA------TTAMGTIVPGGREITLRCGANVIM 291 (348)
T ss_dssp ECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTS-BCBC------CHHHHHHSTTHHHHHHTTTCCEEC
T ss_pred EeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCC-Cchh------cchhhhcCHHHHHHHHhcCCcEEe
Confidence 553 3442 2356789999999999888853 1222 1221 12335678999999986
No 30
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.70 E-value=0.033 Score=53.51 Aligned_cols=167 Identities=21% Similarity=0.186 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-hhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~ag 173 (620)
.+.++-+++++.|.+ |++.||+|+|...+.-.+.++.|.+..++ .+.++.+...+ .+. .++....+|
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~--------~~i~~~l~~~di~~~---~~~~a~~~G 77 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPD--------KIVFADMKTMDAGEL---EADIAFKAG 77 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTT--------SEEEEEEEECSCHHH---HHHHHHHTT
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCC--------CeEEEEEEecCccHH---HHHHHHhCC
Confidence 478899999999998 99999999874322223567777765211 13444444443 222 233344569
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEE-eec-
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP- 251 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I-~L~- 251 (620)
++.|++.....+ + .+.++++++++.|.. +-.+. .+.++++. .++.+.+.|++.+ ..+
T Consensus 78 ad~v~vh~~~~~------------~---~~~~~~~~~~~~g~~-~gv~~--~s~~~p~~---~~~~~~~~g~d~v~~~~~ 136 (207)
T 3ajx_A 78 ADLVTVLGSADD------------S---TIAGAVKAAQAHNKG-VVVDL--IGIEDKAT---RAQEVRALGAKFVEMHAG 136 (207)
T ss_dssp CSEEEEETTSCH------------H---HHHHHHHHHHHHTCE-EEEEC--TTCSSHHH---HHHHHHHTTCSEEEEECC
T ss_pred CCEEEEeccCCh------------H---HHHHHHHHHHHcCCc-eEEEE--ecCCChHH---HHHHHHHhCCCEEEEEec
Confidence 998876443332 1 233566777777874 42322 13335544 2334445689888 432
Q ss_pred CC---ccccCHHHHHHHHHHHHH-hCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 252 DT---VGITMPTEFGKLIADIKA-NTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 252 DT---vG~~~P~~v~~li~~l~~-~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
-+ .| ..|.+ +.++.++. .+| +.+ +.|-...|.-.++++||+.|
T Consensus 137 ~~~~~~g-~~~~~--~~i~~~~~~~~p------i~v----~GGI~~~~~~~~~~aGad~v 183 (207)
T 3ajx_A 137 LDEQAKP-GFDLN--GLLAAGEKARVP------FSV----AGGVKVATIPAVQKAGAEVA 183 (207)
T ss_dssp HHHHTST-TCCTH--HHHHHHHHHTSC------EEE----ESSCCGGGHHHHHHTTCSEE
T ss_pred ccccccC-CCchH--HHHHHhhCCCCC------EEE----ECCcCHHHHHHHHHcCCCEE
Confidence 11 23 23444 66666665 333 322 22333348888999999976
No 31
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.94 E-value=0.4 Score=49.60 Aligned_cols=224 Identities=17% Similarity=0.120 Sum_probs=131.2
Q ss_pred HHHHhHcCCCEEEE-ec---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEE----eecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEA-GF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEv-Gf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 165 (620)
++.++++||+.|=+ |+ |...+ +..+.++.+++...- -.|.++ +|+ ....+.+.
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~-------~~PviaD~d~Gyg--~~~~v~~~ 108 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPF-------GPPLIADMDTGYG--GPIMVART 108 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTT-------SCCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCC-------CCcEEEECCCCCC--CHHHHHHH
Confidence 67778899999988 43 33222 123445555542110 013332 233 34556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCCC-CCCHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAG-RSDRKFLYEILGEV 240 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~~-r~d~e~l~~~~~~~ 240 (620)
.+.+..+|+..|++-..+++- |+..+-=.+.+|..++++.+++-+++.|.+.+ ..+ .|+. ....+..++-+++.
T Consensus 109 v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~-I~ARTDa~~~~gldeAi~Ra~ay 187 (307)
T 3lye_A 109 VEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFV-LIARTDALQSLGYEECIERLRAA 187 (307)
T ss_dssp HHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCE-EEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeE-EEEechhhhccCHHHHHHHHHHH
Confidence 676777899999998887753 33222224789999998888777776664422 222 1221 12356788888888
Q ss_pred HHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCc-chHHHHHHHHHHhcCcEEeeccccccCCcC
Q 007056 241 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL-GLSTANTIAGACAGARQVEVTINGIGERAG 319 (620)
Q Consensus 241 ~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~-GlAvANslaAv~aGA~~Vd~Ti~GlGERaG 319 (620)
.++|||.|.++ |...|+++.++.+.+. .+| +.+-+-..... .+ ..-.--+.|+++|- .....-|+-
T Consensus 188 ~eAGAD~ifi~---~~~~~~~~~~i~~~~~-~~P----v~~n~~~~g~~p~~---t~~eL~~lGv~~v~--~~~~~~raa 254 (307)
T 3lye_A 188 RDEGADVGLLE---GFRSKEQAAAAVAALA-PWP----LLLNSVENGHSPLI---TVEEAKAMGFRIMI--FSFATLAPA 254 (307)
T ss_dssp HHTTCSEEEEC---CCSCHHHHHHHHHHHT-TSC----BEEEEETTSSSCCC---CHHHHHHHTCSEEE--EETTTHHHH
T ss_pred HHCCCCEEEec---CCCCHHHHHHHHHHcc-CCc----eeEEeecCCCCCCC---CHHHHHHcCCeEEE--EChHHHHHH
Confidence 99999999987 6778999998888775 233 32222222111 12 22344456999982 222234777
Q ss_pred cccHHHHHHHHHhccccccCccccCCChhhHHHH
Q 007056 320 NASLEEVVMAFKCRGEHILGGLYTGINTRHIVMA 353 (620)
Q Consensus 320 Na~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~ 353 (620)
+.++++.+..|...|.. +.+..+..+.|+++
T Consensus 255 ~~a~~~~~~~l~~~g~~---~~~~~~~~~el~~~ 285 (307)
T 3lye_A 255 YAAIRETLVRLRDHGVV---GTPDGITPVRLFEV 285 (307)
T ss_dssp HHHHHHHHHHHHHHSCC---CCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC---CccccCCHHHHHHh
Confidence 88888888888875531 22333444555444
No 32
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=95.71 E-value=0.17 Score=51.61 Aligned_cols=202 Identities=9% Similarity=0.052 Sum_probs=105.1
Q ss_pred HHHHHHhHcCCCEEEEecCCCChh--------HHHHHHHHHHHhcccccccCCccc-eEEe---------ecccch----
Q 007056 102 DIARQLAKLGVDIIEAGFPAASKE--------DFEAVRTIAKEVGNAVDAESGYVP-VICG---------LSRCNE---- 159 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~~s~~--------d~e~v~~i~~~~~~~~~~~~~l~~-~i~~---------~~r~~~---- 159 (620)
.+.+.+.++|++.||+......+. +.+.++++.+.. |+.. .+.. ++...+
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------Gl~i~~~~~~~~~~~~~~l~~~d~~~r~ 110 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKA--------GLTIESTFGGLASYTYNHFLAPTLELQS 110 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHT--------TCEEEEEECCHHHHTSCBTTCSSHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHc--------CCeEEEeeccccccccccCCCCCHHHHH
Confidence 355677899999999975322221 344455554432 3321 1111 111111
Q ss_pred ---hhHHHHHHHHhcCCCCEEEEEecC-C-HHHH-HHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC--CC-CCCCCH
Q 007056 160 ---RDIKTAWEAVKYAKRPRIHTFIAT-S-GIHM-EHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP--ED-AGRSDR 230 (620)
Q Consensus 160 ---~dI~~a~eal~~ag~~~v~i~~~~-S-d~h~-~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~--ed-~~r~d~ 230 (620)
+.++++++.....|.+.|.+.... + .... ........+..++.+.+++++|++.|+..+.+-+ .. ..-.++
T Consensus 111 ~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~ 190 (316)
T 3qxb_A 111 LGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSA 190 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCH
Confidence 224455666666788887543322 1 0000 0000012345667777888899999974144433 11 123467
Q ss_pred HHHHHHHHHHHHcCCcEEeec-CCccccC-----H-HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc
Q 007056 231 KFLYEILGEVIKVGATTLNIP-DTVGITM-----P-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 303 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~-DTvG~~~-----P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG 303 (620)
+.+.++++.+.+.+.+.+.++ ||.=... - ..+.+.++.+.. -...+|.+|..+-
T Consensus 191 ~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~-------~i~~vHlkD~~~~------------ 251 (316)
T 3qxb_A 191 ADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQP-------WIAAYHIQQTDGQ------------ 251 (316)
T ss_dssp HHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGG-------GEEEEEECBCCSS------------
T ss_pred HHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHh-------hheEEeeecCCCC------------
Confidence 888888887654455555544 6532221 0 112233333332 2458999986541
Q ss_pred CcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 304 ARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 304 A~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.+. +-.+ .|+ |+.+...++..|+..++
T Consensus 252 ~d~-h~~~--~G~--G~id~~~i~~~L~~~gy 278 (316)
T 3qxb_A 252 LDR-HWSF--TQP--GVVTPQRLQDFWDKYAL 278 (316)
T ss_dssp SCC-CBCT--TSC--SSCCHHHHHHHHHHTTC
T ss_pred cCc-cCCC--CCC--ceECHHHHHHHHHHcCC
Confidence 110 1111 244 99999999999998764
No 33
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.60 E-value=0.66 Score=45.51 Aligned_cols=195 Identities=11% Similarity=0.021 Sum_probs=109.1
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC----CCChhHHHHHHHHHHHhcccccccCCcc-c
Q 007056 75 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP----AASKEDFEAVRTIAKEVGNAVDAESGYV-P 149 (620)
Q Consensus 75 ~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP----~~s~~d~e~v~~i~~~~~~~~~~~~~l~-~ 149 (620)
.++=+.--++|+ ++.++ .++.+.++|++.||+... ..++++.+.++++.+.. ++. .
T Consensus 18 ~klg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~--------gl~i~ 78 (257)
T 3lmz_A 18 FHLGMAGYTFVN--------FDLDT---TLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH--------KVTGY 78 (257)
T ss_dssp SEEEECGGGGTT--------SCHHH---HHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT--------TCEEE
T ss_pred eEEEEEEEeecC--------CCHHH---HHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHc--------CCeEE
Confidence 345555666665 45554 455667889999999642 22455566666666543 231 1
Q ss_pred eEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC---CCC
Q 007056 150 VICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE---DAG 226 (620)
Q Consensus 150 ~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e---d~~ 226 (620)
.+........+.++++++.....|.+.|.+... . +.+.++.++|++.|+. +.+-+. ...
T Consensus 79 ~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--------------~---~~l~~l~~~a~~~gv~-l~lEn~~~~~~~ 140 (257)
T 3lmz_A 79 AVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--------------Y---ELLPYVDKKVKEYDFH-YAIHLHGPDIKT 140 (257)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC--------------G---GGHHHHHHHHHHHTCE-EEEECCCTTCSS
T ss_pred EEeccccCCHHHHHHHHHHHHHhCCCEEEecCC--------------H---HHHHHHHHHHHHcCCE-EEEecCCCcccc
Confidence 222222234556667776666668888876422 1 2345677888899984 555332 222
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCCcccc----CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNIPDTVGIT----MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 302 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~----~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a 302 (620)
-.+++.+.++++. .....=..-||.=.. .| .+.++.+.. -...+|.+|..+-
T Consensus 141 ~~~~~~~~~ll~~---~~p~vg~~~D~~h~~~~g~d~---~~~l~~~~~-------~i~~vHl~D~~~~----------- 196 (257)
T 3lmz_A 141 YPDATDVWVHTKD---LDPRIGMCLDVGHDLRNGCDP---VADLKKYHT-------RVFDMHIKDVTDS----------- 196 (257)
T ss_dssp SCSHHHHHHHHTT---SCTTEEEEEEHHHHHHTTCCH---HHHHHHHGG-------GEEEEEECEESCS-----------
T ss_pred cCCHHHHHHHHHh---CCCCccEEEchhhHHHcCCCH---HHHHHHhhc-------ceeEEeecccccc-----------
Confidence 3467777777762 233222233543211 23 233333332 3468999997651
Q ss_pred cCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 303 GARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 303 GA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
+-..- ..-+| .|+.+...++..|+..++
T Consensus 197 ~~~~~---~~~~G--~G~id~~~~~~~L~~~gy 224 (257)
T 3lmz_A 197 SKAGV---GIEIG--RGKIDFPALIRMMREVNY 224 (257)
T ss_dssp STTCC---EECTT--SSSCCHHHHHHHHHHTTC
T ss_pred cCCCC---ccccC--CCccCHHHHHHHHHHcCC
Confidence 11111 11234 489999999999998764
No 34
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.52 E-value=0.42 Score=47.10 Aligned_cols=168 Identities=17% Similarity=0.180 Sum_probs=93.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhH----------------------HHHHHHHHHHhcccccccCCccceE
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKED----------------------FEAVRTIAKEVGNAVDAESGYVPVI 151 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d----------------------~e~v~~i~~~~~~~~~~~~~l~~~i 151 (620)
..+.++-+++++.|.+. +|.||++.|.+.|.. ++.++++.+.. . .|..
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--------~-~pv~ 84 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--------S-TPIV 84 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--------C-CCEE
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--------C-CCEE
Confidence 34557889999999999 999999988654321 23344443321 1 1322
Q ss_pred Eeecccc-------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC
Q 007056 152 CGLSRCN-------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 224 (620)
Q Consensus 152 ~~~~r~~-------~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed 224 (620)
.....+ .+.++.+++ +|++.|++..-. . +...+.+++++++|.+ +.+...
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~----~Gad~v~~~~~~------------~----~~~~~~~~~~~~~g~~-~~~~i~- 141 (248)
T 1geq_A 85 -LMTYYNPIYRAGVRNFLAEAKA----SGVDGILVVDLP------------V----FHAKEFTEIAREEGIK-TVFLAA- 141 (248)
T ss_dssp -EEECHHHHHHHCHHHHHHHHHH----HTCCEEEETTCC------------G----GGHHHHHHHHHHHTCE-EEEEEC-
T ss_pred -EEeccchhhhcCHHHHHHHHHH----CCCCEEEECCCC------------h----hhHHHHHHHHHHhCCC-eEEEEC-
Confidence 222223 345555555 499998874211 1 1245677888888875 433221
Q ss_pred CCCCCHHHHHHHHHHHHHcCCc-EEeecCCcc---cc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH-HHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGAT-TLNIPDTVG---IT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTI 297 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~-~I~L~DTvG---~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANsl 297 (620)
..+..+.+..+.+ . ++ .|++-...| .. .+....+.++.+++... ++|.+ +.|... .|..
T Consensus 142 -~~t~~e~~~~~~~----~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~----~pi~~----~GGI~~~e~i~ 207 (248)
T 1geq_A 142 -PNTPDERLKVIDD----M-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR----NKVAV----GFGVSKREHVV 207 (248)
T ss_dssp -TTCCHHHHHHHHH----H-CSSEEEEECCC-------CCCHHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHH
T ss_pred -CCCHHHHHHHHHh----c-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC----CCEEE----EeecCCHHHHH
Confidence 1244444433322 2 44 554444333 21 23456678888888652 33332 356666 6777
Q ss_pred HHHHhcCcEEe
Q 007056 298 AGACAGARQVE 308 (620)
Q Consensus 298 aAv~aGA~~Vd 308 (620)
..+.+||+.|-
T Consensus 208 ~~~~~Gad~vi 218 (248)
T 1geq_A 208 SLLKEGANGVV 218 (248)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 77799998874
No 35
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=95.51 E-value=0.32 Score=49.90 Aligned_cols=191 Identities=12% Similarity=0.120 Sum_probs=101.2
Q ss_pred HHHHHHhHcCCCEEEEecCCCC--h-----hHHHHHHHHHHHhcccccccCCccce-EEe---ecc-c-----c------
Q 007056 102 DIARQLAKLGVDIIEAGFPAAS--K-----EDFEAVRTIAKEVGNAVDAESGYVPV-ICG---LSR-C-----N------ 158 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~~s--~-----~d~e~v~~i~~~~~~~~~~~~~l~~~-i~~---~~r-~-----~------ 158 (620)
+.++.+.++|++.||+...... + .+.+.++.+.+.. ++.+. +++ +.+ . .
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~--------gL~~~~i~~~~~~~~~~~l~~~d~~~r~~ 106 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSE--------GLENVKISTNVGATRTFDPSSNYPEQRQE 106 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHT--------TCTTCEEEEECCCCSSSCTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHC--------CCCcceeEEEeccCCCCCCCCCCHHHHHH
Confidence 5566677899999999753221 2 3445555555432 23200 221 111 0 1
Q ss_pred -hhhHHHHHHHHhcCCCCEEEEEecC-C--HHH----H---------HHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 159 -ERDIKTAWEAVKYAKRPRIHTFIAT-S--GIH----M---------EHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 159 -~~dI~~a~eal~~ag~~~v~i~~~~-S--d~h----~---------~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
.+.++.+++..+..|.+.|. .+. + ... - ........+...+.+.++.++|++.|+. +.+-
T Consensus 107 ~~~~~~~~i~~A~~lG~~~v~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE 183 (335)
T 2qw5_A 107 ALEYLKSRVDITAALGGEIMM--GPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVK-LAIE 183 (335)
T ss_dssp HHHHHHHHHHHHHHTTCSEEE--ECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEe--ccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 13345566666777998872 221 0 000 0 0000112345566677888889999974 6664
Q ss_pred CCC----CCCCCHHHHHHHHHHHHHcCCcEEeec-CCc----cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH
Q 007056 222 PED----AGRSDRKFLYEILGEVIKVGATTLNIP-DTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 292 (620)
Q Consensus 222 ~ed----~~r~d~e~l~~~~~~~~~aGa~~I~L~-DTv----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 292 (620)
+.. ..-.+.+.+.++++. .+...+.++ ||. +...|.++.+.++.+... + -...+|++|..
T Consensus 184 ~~~~~~~~~~~t~~~~~~ll~~---v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~-~----ri~~vHlkD~~--- 252 (335)
T 2qw5_A 184 PITHWETPGPNKLSQLIEFLKG---VKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQ-G----RLHYVQVSPPD--- 252 (335)
T ss_dssp CCCTTTCSSCCSHHHHHHHHTT---CCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHH-T----CEEEEEECCTT---
T ss_pred eCCcccccccCCHHHHHHHHHh---cCCCCeeEEEecccchhccCChHHHHHHHHHhCCc-C----CEEEEEECCCC---
Confidence 321 122456666666553 344434433 652 222455444555554410 2 24689999842
Q ss_pred HHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 293 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 293 vANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
+ .-+|+ |..+.+.++..|+. ++
T Consensus 253 ---------------~---~~~G~--G~id~~~i~~~L~~-gy 274 (335)
T 2qw5_A 253 ---------------R---GALHT--SWLPWKSFLTPIVK-VY 274 (335)
T ss_dssp ---------------S---SCSSS--SCCCHHHHHHHHHH-HC
T ss_pred ---------------C---CCCCC--CCcCHHHHHHHHHc-cC
Confidence 1 23444 88999999999997 64
No 36
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.42 E-value=0.41 Score=49.33 Aligned_cols=207 Identities=16% Similarity=0.125 Sum_probs=122.6
Q ss_pred HHHHhHcCCCEEEE-ec---------CCCCh---hH-HHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEA-GF---------PAASK---ED-FEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEv-Gf---------P~~s~---~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 165 (620)
++.++++||+.|=+ |+ |...+ +| ...++.|++...+ .|.++- |+ ....+.++
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~--------~PviaD~d~Gyg--~~~~v~~t 100 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPS--------TPVIADADTGYG--GPIMVART 100 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTT--------SCEEEECTTTTS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccC--------CCEEEECCCCCC--CHHHHHHH
Confidence 67778899999988 43 33222 12 3445555542111 133322 32 34456666
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhC---CCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCCC-CCCHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLR---KTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAG-RSDRKFLYEILGEV 240 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~---~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~~-r~d~e~l~~~~~~~ 240 (620)
.+.+..+|+..|++-..+.+-.+-+.-+ .+.+|.+++++.+++-+++.|.+ +...+ -|+. ....+..++-+++.
T Consensus 101 v~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d-~~I~ARTDa~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 101 TEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSD-IVVIARTDSLQTHGYEESVARLRAA 179 (302)
T ss_dssp HHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCC-CEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCC-EEEEEEecccccCCHHHHHHHHHHH
Confidence 6777778999999988877643322222 47899999998887777666654 22222 1211 12467788888888
Q ss_pred HHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccC-CcC
Q 007056 241 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE-RAG 319 (620)
Q Consensus 241 ~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGE-RaG 319 (620)
.++|||.|.++ |...|+++.++.+.+.. +| +.+-+-.......= ..-.--+.|+++|- .|..- |+-
T Consensus 180 ~eAGAD~ifi~---g~~~~~ei~~~~~~~~~-~P----l~~n~~~~g~~p~~--~~~eL~~lGv~~v~---~~~~~~raa 246 (302)
T 3fa4_A 180 RDAGADVGFLE---GITSREMARQVIQDLAG-WP----LLLNMVEHGATPSI--SAAEAKEMGFRIII---FPFAALGPA 246 (302)
T ss_dssp HTTTCSEEEET---TCCCHHHHHHHHHHTTT-SC----EEEECCTTSSSCCC--CHHHHHHHTCSEEE---ETTTTHHHH
T ss_pred HHcCCCEEeec---CCCCHHHHHHHHHHhcC-Cc----eeEEEecCCCCCCC--CHHHHHHcCCCEEE---EchHHHHHH
Confidence 99999999875 46788888887776531 22 22322222211111 22334456998883 33333 778
Q ss_pred cccHHHHHHHHHhcc
Q 007056 320 NASLEEVVMAFKCRG 334 (620)
Q Consensus 320 Na~lEevv~~L~~~~ 334 (620)
+.++++.+..|...|
T Consensus 247 ~~A~~~~~~~i~~~g 261 (302)
T 3fa4_A 247 VAAMREAMEKLKRDG 261 (302)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888888755
No 37
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=95.37 E-value=0.075 Score=52.83 Aligned_cols=190 Identities=13% Similarity=0.052 Sum_probs=104.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe----ecc-------------c
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----LSR-------------C 157 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r-------------~ 157 (620)
++.++. ++.+.++|++.||+.+|. +.+.+.++.+.+..+-.+ ..+.. |.. .
T Consensus 23 ~~~~~~---l~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~ 90 (269)
T 3ngf_A 23 VPFLER---FRLAAEAGFGGVEFLFPY--DFDADVIARELKQHNLTQ-------VLFNMPPGDWAAGERGMAAISGREQE 90 (269)
T ss_dssp SCHHHH---HHHHHHTTCSEEECSCCT--TSCHHHHHHHHHHTTCEE-------EEEECCCSCTTTTCCBCTTCTTCHHH
T ss_pred CCHHHH---HHHHHHcCCCEEEecCCc--cCCHHHHHHHHHHcCCcE-------EEEecCCCccccCCCCcCCCccHHHH
Confidence 566554 555677899999998774 335566666665432211 11111 100 0
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCEEEEcCC------CCCC
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPE------DAGR 227 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~a~~~G~~~V~f~~e------d~~r 227 (620)
..+.++++++.....|.+.|.+... .+ -+.+. +...+.+.+++++|++.|+. +.+-+. ...-
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g-~~------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~n~~~~~~~~~ 162 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG-IT------EGLDRKACEETFIENFRYAADKLAPHGIT-VLVEPLNTRNMPGYFI 162 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC-BC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC-CC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEeeCCcccCccchh
Confidence 1134556666666779988876443 11 12233 34555566777788888874 655331 1223
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec-CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.+++.+.++++.+ +.+.+.++ ||.=...-. .+....++. +.+ -...+|++|..|-
T Consensus 163 ~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~-~~~---~i~~vHl~D~~~r--------------- 218 (269)
T 3ngf_A 163 VHQLEAVGLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEK-MNG---AFSHVQIASVPDR--------------- 218 (269)
T ss_dssp CCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHH-TTT---SEEEEEECCTTTC---------------
T ss_pred cCHHHHHHHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHH-hhh---hEEEEEEecCCCC---------------
Confidence 4677777777655 43334433 543111100 122333333 222 3468999997431
Q ss_pred EeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 307 VEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 307 Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
. -.| .|+.+...++..|+..|+
T Consensus 219 ---~--~~G--~G~id~~~~~~~L~~~gy 240 (269)
T 3ngf_A 219 ---H--EPD--EGELNYPYLFSVLESVGY 240 (269)
T ss_dssp ---C--CTT--SSSBCHHHHHHHHHHTTC
T ss_pred ---C--CCC--CCccCHHHHHHHHHHcCC
Confidence 1 234 589999999999998653
No 38
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=95.37 E-value=0.25 Score=49.40 Aligned_cols=197 Identities=17% Similarity=0.235 Sum_probs=102.7
Q ss_pred HHHHHhHcCCCEEEEecCCC---ChhHHHHHHHHHHHhcccccccCCccc-eEEe-e-----cc----------cc----
Q 007056 103 IARQLAKLGVDIIEAGFPAA---SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG-L-----SR----------CN---- 158 (620)
Q Consensus 103 Ia~~L~~~Gvd~IEvGfP~~---s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~-~-----~r----------~~---- 158 (620)
.++.+.++|++.||+.++.. ++.+.+.++.+.+.. ++.. .+.. + .. ..
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r 97 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAA--------GIQVTVIFGGFDGESYADIPTTARTVGLVPLETR 97 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHT--------TCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHc--------CCEEEEEeeccCCcccccccccccccCCCCHHHH
Confidence 46667788999999986432 344555666655543 2321 1111 0 00 01
Q ss_pred ---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 007056 159 ---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 235 (620)
Q Consensus 159 ---~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~ 235 (620)
.+.++++++.....|.+.|.+.....+.. .....+...+.+.++.++|++.|+. +.+-+.. .+++.+.+
T Consensus 98 ~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~---~~~~~~~~ 169 (290)
T 3tva_A 98 ASRVAEMKEISDFASWVGCPAIGLHIGFVPES----SSPDYSELVRVTQDLLTHAANHGQA-VHLETGQ---ESADHLLE 169 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT----TSHHHHHHHHHHHHHHHHHHTTTCE-EEEECCS---SCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc----chHHHHHHHHHHHHHHHHHHHcCCE-EEEecCC---CCHHHHHH
Confidence 12344555555556888887753321100 1112456677778888888888874 5554321 45677777
Q ss_pred HHHHHHHcCCcEEee-cCCccccC-H-HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 236 ILGEVIKVGATTLNI-PDTVGITM-P-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L-~DTvG~~~-P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
+++.+ +...+.+ -||.=... - ....+.++.+.. -...+|.||..+--. -..|..+-.- .
T Consensus 170 l~~~~---~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~-------~i~~vHl~D~~~~~~------~~~g~~~~~~--~ 231 (290)
T 3tva_A 170 FIEDV---NRPNLGINFDPANMILYGTGNPIEALRKVAR-------YVRSIHCKDALWAPV------NERGKSWGQE--V 231 (290)
T ss_dssp HHHHH---CCTTEEEEECHHHHHHTTCSCHHHHHHHHGG-------GEEEEEECEEECCCG------GGBTTBCCEE--E
T ss_pred HHHhc---CCCCEEEEeccHHHHHhCCCCHHHHHHHHHh-------hheEEEeccccCCCc------cccccccccc--c
Confidence 76654 4333333 35432211 0 112233333332 246889998643210 0012111111 1
Q ss_pred cccCCcCcccHHHHHHHHHhccc
Q 007056 313 GIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 313 GlGERaGNa~lEevv~~L~~~~~ 335 (620)
-+| .|..+...++..|+..++
T Consensus 232 ~~G--~G~id~~~~~~~L~~~gy 252 (290)
T 3tva_A 232 ALG--TGDVGMEAYLTTLWEIGY 252 (290)
T ss_dssp STT--SSSSCHHHHHHHHHHTTC
T ss_pred CCC--CceeCHHHHHHHHHHcCC
Confidence 234 489999999999998764
No 39
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.17 E-value=0.13 Score=51.23 Aligned_cols=153 Identities=16% Similarity=0.184 Sum_probs=99.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
-+.++-+++++.|.+.|++.||+.+ .++...+.++++++..+.. .+-+=+-...++.+.++++ |.
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~e~I~~l~~~~~~~---------~iGaGTVlt~~~a~~Ai~A----GA 107 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITF--RSDAAVEAIRLLRQAQPEM---------LIGAGTILNGEQALAAKEA----GA 107 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTTC---------EEEEECCCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--CCCCHHHHHHHHHHhCCCC---------EEeECCcCCHHHHHHHHHc----CC
Confidence 4578899999999999999999966 4566678899888865321 1111122356677777776 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 254 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv 254 (620)
+-|+. |.. + .+.++++++.|+. +.-++ .++..+. .+.++|+|.|.+
T Consensus 108 ~fIvs--P~~----------~--------~~vi~~~~~~gi~-~ipGv-----~TptEi~----~A~~~Gad~vK~---- 153 (232)
T 4e38_A 108 TFVVS--PGF----------N--------PNTVRACQEIGID-IVPGV-----NNPSTVE----AALEMGLTTLKF---- 153 (232)
T ss_dssp SEEEC--SSC----------C--------HHHHHHHHHHTCE-EECEE-----CSHHHHH----HHHHTTCCEEEE----
T ss_pred CEEEe--CCC----------C--------HHHHHHHHHcCCC-EEcCC-----CCHHHHH----HHHHcCCCEEEE----
Confidence 87753 321 1 2566778888864 22122 2444433 346899998876
Q ss_pred cccCHHHH---HHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 255 GITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 255 G~~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.|.+. .++++.++.-+|+ +++-. .-|....|.-..+.+|+..
T Consensus 154 ---FPa~~~gG~~~lkal~~p~p~---ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 154 ---FPAEASGGISMVKSLVGPYGD---IRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp ---CSTTTTTHHHHHHHHHTTCTT---CEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred ---CcCccccCHHHHHHHHHHhcC---CCeee----EcCCCHHHHHHHHHCCCeE
Confidence 22111 2788888887774 44543 3455567899999999854
No 40
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=95.15 E-value=1.7 Score=43.23 Aligned_cols=209 Identities=14% Similarity=0.059 Sum_probs=112.3
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCcc-ceEE
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYV-PVIC 152 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~-~~i~ 152 (620)
+.++-+...++++ ++.++ .++.+.++|++.||+..+. .+.+.+.++.+.+.. ++. ..++
T Consensus 25 ~mklg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~--------gl~v~~~~ 84 (287)
T 3kws_A 25 ELKLSFQEGIAPG--------ESLNE---KLDFMEKLGVVGFEPGGGG-LAGRVNEIKQALNGR--------NIKVSAIC 84 (287)
T ss_dssp CCEEEEETTSSCC--------SSHHH---HHHHHHHTTCCEEECBSTT-CGGGHHHHHHHHTTS--------SCEECEEE
T ss_pred eeeEEEEecccCC--------CCHHH---HHHHHHHcCCCEEEecCCc-hHHHHHHHHHHHHHc--------CCeEEEEe
Confidence 3457777888876 35554 5556677899999997652 345556666555432 332 1222
Q ss_pred eecc-----cch-------hhHHHHHHHHhcCCCCEEEEEecCCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 007056 153 GLSR-----CNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIH-MEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 219 (620)
Q Consensus 153 ~~~r-----~~~-------~dI~~a~eal~~ag~~~v~i~~~~Sd~h-~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~ 219 (620)
...+ ..+ +.++++++.....|.+.|.+........ .........+...+.+.++.++|++.|+. +.
T Consensus 85 ~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~ 163 (287)
T 3kws_A 85 AGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS-VI 163 (287)
T ss_dssp CCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC-EE
T ss_pred cCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EE
Confidence 2111 111 2345566666667888876643211000 00000012355666777788889999985 66
Q ss_pred EcCCC----CCCCCHHHHHHHHHHHHHcCCcEEeec-CCccccC-HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 220 FSPED----AGRSDRKFLYEILGEVIKVGATTLNIP-DTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 220 f~~ed----~~r~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
+-+.. ..-.+++.+.++++.+ +.+.+.++ ||.=... -....+.++.+.. -...+|++|..+
T Consensus 164 lE~~~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHlkD~~~--- 230 (287)
T 3kws_A 164 FEPLNRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGAFISGGE-------YLQHVHVASRKR--- 230 (287)
T ss_dssp ECCCCTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEECCTTT---
T ss_pred EEecCcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHHHHHhhh-------hEEEEEeCCCCC---
Confidence 64321 1234667777776654 43334433 5432110 0111223333322 246899999741
Q ss_pred HHHHHHHHhcCcEEeeccccccCCcCc--ccHHHHHHHHHhccc
Q 007056 294 ANTIAGACAGARQVEVTINGIGERAGN--ASLEEVVMAFKCRGE 335 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti~GlGERaGN--a~lEevv~~L~~~~~ 335 (620)
+ .. .| .|+ .+...++..|+..++
T Consensus 231 -----------r----~~--pG--~G~d~id~~~i~~~L~~~gy 255 (287)
T 3kws_A 231 -----------R----SM--PG--EDGDADNYINGFKGLKMIGY 255 (287)
T ss_dssp -----------S----CS--TT--TTGGGCCCHHHHHHHHHTTC
T ss_pred -----------C----CC--CC--CCCCCcCHHHHHHHHHHcCC
Confidence 1 12 23 588 999999999998764
No 41
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=94.86 E-value=0.19 Score=49.99 Aligned_cols=207 Identities=19% Similarity=0.197 Sum_probs=106.4
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCCh---hHHHHHHHHHHHhcccccccCCccceEEe
Q 007056 77 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK---EDFEAVRTIAKEVGNAVDAESGYVPVICG 153 (620)
Q Consensus 77 V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 153 (620)
+-+.-.++++. +..+.++. ++.+.++|++.||+..+...+ .+.+.++.+.+..+-.+ ..+.+
T Consensus 4 ig~~~~~~~~~-----~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~ 68 (290)
T 2qul_A 4 VGMFYTYWSTE-----WMVDFPAT---AKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTV-------MCCIG 68 (290)
T ss_dssp EEEETTSSCSS-----SCCCHHHH---HHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEE-------EEEEE
T ss_pred eeEEeeeecCc-----ccccHHHH---HHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCce-------EEecC
Confidence 44444455542 12355554 455567899999997543222 45566666555432211 11111
Q ss_pred e------cccch-------hhHHHHHHHHhcCCCCEEEEEe----cCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHH
Q 007056 154 L------SRCNE-------RDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKT----KQQVVEIARSMVKFARS 212 (620)
Q Consensus 154 ~------~r~~~-------~dI~~a~eal~~ag~~~v~i~~----~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~a~~ 212 (620)
+ +...+ +.++++++.....|.+.|.+.. .....+ -..+ .+...+.+.++.++|++
T Consensus 69 ~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~l~~l~~~a~~ 144 (290)
T 2qul_A 69 LKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPL----DMKDKRPYVDRAIESVRRVIKVAED 144 (290)
T ss_dssp ECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCT----TCCCCHHHHHHHHHHHHTTHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC----CcccHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 3345556655566888876532 110000 0112 24456666777788899
Q ss_pred cCCCEEEEcCCC----CCCCCHHHHHHHHHHHHHcCCcEEee-cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCC
Q 007056 213 LGCDDVEFSPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 287 (620)
Q Consensus 213 ~G~~~V~f~~ed----~~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN 287 (620)
.|+. +.+-+.. ..-.+++.+.++++.+ +...+.+ .||.=... .. .+....+++ +.+ -...+|.||
T Consensus 145 ~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~~---~~~~~g~~~D~~h~~~-~g-~d~~~~l~~-~~~---~i~~vH~~D 214 (290)
T 2qul_A 145 YGII-YALEVVNRFEQWLCNDAKEAIAFADAV---DSPACKVQLDTFHMNI-EE-TSFRDAILA-CKG---KMGHFHLGE 214 (290)
T ss_dssp HTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---CCTTEEEEEEHHHHHH-HC-SCHHHHHHH-TTT---TEEEEEECC
T ss_pred cCCE-EEEEeCccccccccCCHHHHHHHHHHc---CCCCEEEEEEchhhhh-cC-CCHHHHHHH-HHh---heeEEEEcc
Confidence 9974 5553321 1234677777777654 4333333 36521110 00 012333333 222 356899998
Q ss_pred CcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 288 DLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 288 D~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
..+ .-+|+ |..+...++..|+..++
T Consensus 215 ~~~---------------------~~~G~--G~id~~~~~~~L~~~gy 239 (290)
T 2qul_A 215 ANR---------------------LPPGE--GRLPWDEIFGALKEIGY 239 (290)
T ss_dssp TTS---------------------CCTTS--SCSCHHHHHHHHHHTTC
T ss_pred CCC---------------------CCCCC--CCcCHHHHHHHHHHhCC
Confidence 632 13454 88999999999998653
No 42
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=94.85 E-value=0.48 Score=49.02 Aligned_cols=140 Identities=17% Similarity=0.195 Sum_probs=86.7
Q ss_pred eEEEeCCCc---cc--CCCCCCCCCH-HHHHHHHHHHhHcCCCEEEEec----CCCC---h-hHHHHHHHHHHHhccccc
Q 007056 77 VRVFDTTLR---DG--EQSPGATLTS-KEKLDIARQLAKLGVDIIEAGF----PAAS---K-EDFEAVRTIAKEVGNAVD 142 (620)
Q Consensus 77 V~I~DtTLR---DG--~Qs~g~~fs~-~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s---~-~d~e~v~~i~~~~~~~~~ 142 (620)
+.|+|+|.= || ++.. +. +..++.++.+.+.|.|+|.+|. |.+. + ++.+.++.+.+...
T Consensus 51 m~I~n~tpdsf~d~i~~~~~----~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~---- 122 (310)
T 2h9a_B 51 LEVFDTPPTDWPDILVEPFK----DVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAID---- 122 (310)
T ss_dssp EEEESSCCSSCCHHHHGGGT----TTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCS----
T ss_pred EEEeeCCCcccchhhhhhhc----cHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCC----
Confidence 679999874 66 4332 22 5678889999999999999996 5432 2 34566777766421
Q ss_pred ccCCccceEEeecc----cchhhHHHHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE
Q 007056 143 AESGYVPVICGLSR----CNERDIKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD 217 (620)
Q Consensus 143 ~~~~l~~~i~~~~r----~~~~dI~~a~eal~~ag-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~ 217 (620)
+| |+.+.- .+.+-++.++++. ++ .+.| .++|.. ...++++.++++|+.
T Consensus 123 -----vp-lsI~DT~~~~~~~~V~eaal~ag--a~~k~iI---Ndvs~~---------------~~~~~~~~aa~~g~~- 175 (310)
T 2h9a_B 123 -----VP-LMIIGCGVEEKDAEIFPVIGEAL--SGRNCLL---SSATKD---------------NYKPIVATCMVHGHS- 175 (310)
T ss_dssp -----SC-EEEECCSCHHHHHHHHHHHHHHT--TTSCCEE---EEECTT---------------THHHHHHHHHHHTCE-
T ss_pred -----ce-EEEECCCCCCCCHHHHHHHHHhC--CCCCCEE---EECCCC---------------ccHHHHHHHHHhCCC-
Confidence 12 333344 4556677777762 22 2234 344321 123556677888875
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHcCC--cEEeecCCcc
Q 007056 218 VEFSPEDAGRSDRKFLYEILGEVIKVGA--TTLNIPDTVG 255 (620)
Q Consensus 218 V~f~~ed~~r~d~e~l~~~~~~~~~aGa--~~I~L~DTvG 255 (620)
|...+.. |.+++.+.++.+.++|. +.|.|==.+|
T Consensus 176 vv~m~~~----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 176 VVASAPL----DINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp EEEECSS----CHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred EEEEChh----HHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 5544331 57999999999999998 4565533444
No 43
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.83 E-value=0.16 Score=49.89 Aligned_cols=157 Identities=19% Similarity=0.212 Sum_probs=100.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
..+.++-+.+++.|.+-|++.||+.+ .+|.-.+.++.|++..+.. .|-+=+-.+.++.+.+.++ |
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~~~I~~l~~~~p~~---------~IGAGTVlt~~~a~~ai~A----G 85 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTL--RTEAGLAAISAIKKAVPEA---------IVGAGTVCTADDFQKAIDA----G 85 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTTS---------EEEEECCCSHHHHHHHHHH----T
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeC--CCccHHHHHHHHHHHCCCC---------eEeeccccCHHHHHHHHHc----C
Confidence 35678899999999999999999976 4566778899998865321 2222233467778877776 7
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC--E-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD--D-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~--~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
.+-|. .|.. + .+.+++++++|++ . =-+-| + -.+++.+. .+.++|+|.|.+
T Consensus 86 A~fiv--sP~~----------~--------~evi~~~~~~~v~~~~~~~~~P-G--~~TptE~~----~A~~~Gad~vK~ 138 (217)
T 3lab_A 86 AQFIV--SPGL----------T--------PELIEKAKQVKLDGQWQGVFLP-G--VATASEVM----IAAQAGITQLKC 138 (217)
T ss_dssp CSEEE--ESSC----------C--------HHHHHHHHHHHHHCSCCCEEEE-E--ECSHHHHH----HHHHTTCCEEEE
T ss_pred CCEEE--eCCC----------c--------HHHHHHHHHcCCCccCCCeEeC-C--CCCHHHHH----HHHHcCCCEEEE
Confidence 77653 2321 1 2566778877650 0 01222 1 13344332 356899999875
Q ss_pred cCCccccCHHHH---HHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 251 PDTVGITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 251 ~DTvG~~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.|.+. .++++.++.-+|+ +++-.= -|....|.-..+.+|+..
T Consensus 139 -------FPa~~~gG~~~lkal~~p~p~---i~~~pt----GGI~~~N~~~~l~aGa~~ 183 (217)
T 3lab_A 139 -------FPASAIGGAKLLKAWSGPFPD---IQFCPT----GGISKDNYKEYLGLPNVI 183 (217)
T ss_dssp -------TTTTTTTHHHHHHHHHTTCTT---CEEEEB----SSCCTTTHHHHHHSTTBC
T ss_pred -------CccccccCHHHHHHHHhhhcC---ceEEEe----CCCCHHHHHHHHHCCCEE
Confidence 34332 3788888888874 455433 334456888899999843
No 44
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.81 E-value=1.5 Score=45.37 Aligned_cols=183 Identities=17% Similarity=0.170 Sum_probs=101.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec----CCCC--------hhHHHHHHHHHHHhcccccccCCccceEEeecccchhh
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGF----PAAS--------KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD 161 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s--------~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d 161 (620)
.++.+..++.++.+.+.|-|+|++|. |.+. ++|.+.+..+.+.+... . + .....--.+.+-
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~---~---vpISIDT~~~~V 117 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-F---P---QLISVDTSRPRV 117 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-C---C---SEEEEECSCHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-C---C---CeEEEeCCCHHH
Confidence 36889999999999999999999996 5433 23344333333322111 0 1 112233345667
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC------------
Q 007056 162 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD------------ 229 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d------------ 229 (620)
++.|+++ |++.|+ .+|- .. . .++++.+++.|+. |......+...+
T Consensus 118 a~aAl~a----Ga~iIN---DVsg--------~~----~---~~m~~v~a~~g~~-vVlMh~~G~P~tmq~~~~ydvv~e 174 (314)
T 3tr9_A 118 MREAVNT----GADMIN---DQRA--------LQ----L---DDALTTVSALKTP-VCLMHFPSETRKPGSTTHFYFLQS 174 (314)
T ss_dssp HHHHHHH----TCCEEE---ETTT--------TC----S---TTHHHHHHHHTCC-EEEECCCCTTCCTTSSCHHHHHHH
T ss_pred HHHHHHc----CCCEEE---ECCC--------CC----c---hHHHHHHHHhCCe-EEEECCCCCCcccccccccchHHH
Confidence 7777776 777654 4432 11 1 1455666778876 555433222111
Q ss_pred -HHHHHHHHHHHHHcCCc--EEeecC-Ccc----ccCHHHHHHHHHHHHHh-CCCCCceeEEE------------ecCCC
Q 007056 230 -RKFLYEILGEVIKVGAT--TLNIPD-TVG----ITMPTEFGKLIADIKAN-TPGIENVVIST------------HCQND 288 (620)
Q Consensus 230 -~e~l~~~~~~~~~aGa~--~I~L~D-TvG----~~~P~~v~~li~~l~~~-~~~~~~v~i~~------------H~HND 288 (620)
.+++.+.++.+.++|++ .|.| | -.| .-++++-.++++.+..- ..+.+ +-+|+ -..+-
T Consensus 175 v~~~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~P-vL~G~SRKsfig~~~~~~~~~R 252 (314)
T 3tr9_A 175 VKKELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFYLLNKLPEFVAMGLP-VLSGWSRKSMIGDVLNQPPENR 252 (314)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSC-BEECCTTCHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHHHHHHHHHHhcCCCC-EEEEechhhhhhhhcCCChHHh
Confidence 47788888899999985 3433 3 235 23566666666665431 11211 33332 12233
Q ss_pred cchHHHHHHHHHHhcCcEEe
Q 007056 289 LGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 289 ~GlAvANslaAv~aGA~~Vd 308 (620)
.+--+|-+..|++.||+.|-
T Consensus 253 ~~~t~a~~~~a~~~Ga~IvR 272 (314)
T 3tr9_A 253 LFGSIAADVLAVYHGASIIR 272 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCcEEE
Confidence 34444556777888988873
No 45
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=94.77 E-value=0.89 Score=46.69 Aligned_cols=147 Identities=17% Similarity=0.259 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 165 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 165 (620)
.++.+..++.++.+.+.|-|+|++|. |.+. ++|++.+..+.+.+... +. + | ..--.+.+-++.+
T Consensus 48 ~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-----~v-p-i-SIDT~~~~Va~aA 119 (294)
T 2dqw_A 48 YLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-----GV-P-V-SVDTRKPEVAEEA 119 (294)
T ss_dssp -----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-----CS-C-E-EEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-----CC-e-E-EEECCCHHHHHHH
Confidence 46778889999999999999999996 4322 23455544444433211 11 1 2 2223456667777
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC-CCCCC--------------H
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRSD--------------R 230 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed-~~r~d--------------~ 230 (620)
+++ |.+.| +.+|-. . + .++++.++++|+. +...+.+ +...+ .
T Consensus 120 l~a----Ga~iI---NdVsg~-------~--d------~~m~~v~a~~~~~-vVlmh~~eG~p~tm~~~~~y~dv~~ev~ 176 (294)
T 2dqw_A 120 LKL----GAHLL---NDVTGL-------R--D------ERMVALAARHGVA-AVVMHMPVPDPATMMAHARYRDVVAEVK 176 (294)
T ss_dssp HHH----TCSEE---ECSSCS-------C--C------HHHHHHHHHHTCE-EEEECCSSSCTTTGGGGCCCSSHHHHHH
T ss_pred HHh----CCCEE---EECCCC-------C--C------hHHHHHHHHhCCC-EEEEcCCCCCCccccccCccccHHHHHH
Confidence 776 77754 444421 0 1 1456667778875 5554433 22121 4
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccccC-HHHHHHHHHHHHH
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGITM-PTEFGKLIADIKA 271 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~~~-P~~v~~li~~l~~ 271 (620)
+++.+.++.+.++|...|.|==-+|... .++-.++++.+++
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~~l~~ 218 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLRRLDE 218 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHHHHHH
Confidence 6888889999999988544422334443 6666777777654
No 46
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=94.63 E-value=3.6 Score=41.97 Aligned_cols=200 Identities=12% Similarity=0.070 Sum_probs=119.6
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee--
Q 007056 77 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-- 154 (620)
Q Consensus 77 V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-- 154 (620)
...+|-|| .+-..+.++..++.+...+.|+.-+-+ +|. +++...+.+... . ..+..+.+|
T Consensus 59 a~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV-~P~-------~V~~a~~~L~~s---~-V~V~tVigFP~ 120 (288)
T 3oa3_A 59 AQIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCV-RPD-------YVSRAVQYLQGT---Q-VGVTCVIGFHE 120 (288)
T ss_dssp GGGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGG-------GHHHHHHHTTTS---S-CEEEEEESTTT
T ss_pred HHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHH-------HHHHHHHHcCCC---C-CeEEEEeCCCC
Confidence 34678777 234578999999999999999999988 453 455544444221 0 112233443
Q ss_pred cccc-hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHH
Q 007056 155 SRCN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 233 (620)
Q Consensus 155 ~r~~-~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l 233 (620)
+... ..-+..+-+++ ..|++.|.+++.... ......+++.+.+..+++.+.+..+ .|.+ |.. ..+.+.+
T Consensus 121 G~~~~~~Kv~Ea~~Ai-~~GAdEIDmVINig~-----lk~g~~~~v~~eI~~V~~a~~~~~l-KVIl--Et~-~Lt~eei 190 (288)
T 3oa3_A 121 GTYSTDQKVSEAKRAM-QNGASELDMVMNYPW-----LSEKRYTDVFQDIRAVRLAAKDAIL-KVIL--ETS-QLTADEI 190 (288)
T ss_dssp SCSCHHHHHHHHHHHH-HTTCSEEEEECCHHH-----HHTTCHHHHHHHHHHHHHHTTTSEE-EEEC--CGG-GCCHHHH
T ss_pred CCCcHHHHHHHHHHHH-HcCCCEEEEEeehhh-----hcCCcHHHHHHHHHHHHHHhcCCCc-eEEE--ECC-CCCHHHH
Confidence 1111 11122233333 359999998876432 2234567788888877777654323 2444 222 3456778
Q ss_pred HHHHHHHHHcCCcEEeecC--CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 234 YEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
...++.+.++|||-|--.- +.|.++|+.+. +++.+.+..++.-.+..+=-.++ ...+++-+++||++|=+|
T Consensus 191 ~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~-lmr~~v~~~g~~v~VKAAGGIrt-----~edAl~mi~aGA~RiGtS 263 (288)
T 3oa3_A 191 IAGCVLSSLAGADYVKTSTGFNGPGASIENVS-LMSAVCDSLQSETRVKASGGIRT-----IEDCVKMVRAGAERLGAS 263 (288)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSSCCCCHHHHH-HHHHHHHHSSSCCEEEEESSCCS-----HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHH-HHHHHHHHhCCCceEEEeCCCCC-----HHHHHHHHHcCCceeehh
Confidence 8999999999999988662 23467888875 44555443322001222212232 278899999999987433
No 47
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.63 E-value=0.85 Score=44.70 Aligned_cols=214 Identities=14% Similarity=0.116 Sum_probs=112.4
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe--
Q 007056 76 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-- 153 (620)
Q Consensus 76 ~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-- 153 (620)
++=+.-.|+|. .++.++. ++.+.++|++.||+..+.-.+.+.+.++.+.+..+-.+ ..+..
T Consensus 6 ~lg~~~~~~~~-------~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~ 68 (275)
T 3qc0_A 6 GLSINLATIRE-------QCGFAEA---VDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKL-------TGLCRGG 68 (275)
T ss_dssp TEEEEGGGGTT-------TCCHHHH---HHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEE-------SCEEEEE
T ss_pred cceeeeeeccC-------CCCHHHH---HHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCce-------EEeecCC
Confidence 35555555643 2466655 45567789999999653212334555666555433221 11221
Q ss_pred -ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 154 -LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 154 -~~r~~~-------~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
+....+ +.++++++.....|.+.|.+.....+. -..+ .+...+.+.++.++|++.|+. +.+-
T Consensus 69 ~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE 142 (275)
T 3qc0_A 69 FFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPG-----GSKNIDAARRMVVEGIAAVLPHARAAGVP-LAIE 142 (275)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCT-----TCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEC
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCC-----CCcCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 221121 345566666666788888776432110 0112 244566677778888999985 6664
Q ss_pred CCC-------CCCCCHHHHHHHHHHHHHcCCcEEee-cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 222 PED-------AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 222 ~ed-------~~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
+.. ..-.+++.+.++++.+ +. .+.+ -||.=...-....+.++.+... + -...+|.+|...-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~vg~~~D~~h~~~~~d~~~~l~~~~~~--~---~i~~vH~~D~~~~-- 211 (275)
T 3qc0_A 143 PLHPMYAADRACVNTLGQALDICETL---GP-GVGVAIDVYHVWWDPDLANQIARAGKM--K---AILAHHICDWLVP-- 211 (275)
T ss_dssp CCCGGGTTTTBSCCCHHHHHHHHHHH---CT-TEEEEEEHHHHTTCTTHHHHHHHHHHT--T---CEEEEEECBCCSS--
T ss_pred ECCCcccCCccccCCHHHHHHHHHHh---Cc-ccEEEEEhhhheeCCCHHHHHHHcCcc--c---eEEEEEecCCCCC--
Confidence 321 1234677777877765 32 3333 3543322211223333333310 1 2468899984211
Q ss_pred HHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 294 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.+ +.+.. -.-+| .|+.+...++..|+..++
T Consensus 212 --------~~-~~~~~-r~~~G--~G~id~~~~~~~L~~~gy 241 (275)
T 3qc0_A 212 --------TK-DMLTD-RGMMG--DGVIDLKGIRRRIEAAGF 241 (275)
T ss_dssp --------CC-CSSSB-CBCTT--SSCCCHHHHHHHHHHTTC
T ss_pred --------cc-cccCC-CcCCC--CCccCHHHHHHHHHHcCC
Confidence 01 10000 01234 489999999999998764
No 48
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.41 E-value=0.54 Score=46.01 Aligned_cols=164 Identities=17% Similarity=0.211 Sum_probs=96.8
Q ss_pred HHHHHHHHhHcCCCEEEEe-----c-CCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-hhhHHHHHHHHhcC
Q 007056 100 KLDIARQLAKLGVDIIEAG-----F-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYA 172 (620)
Q Consensus 100 Kl~Ia~~L~~~Gvd~IEvG-----f-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~a 172 (620)
-.+.++.+.+.|+|+|++. | |.. ....+.++.|.+.. +. +..+.+--.+ .+.++.+.++
T Consensus 21 l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~-~~~~~~~~~lr~~~-~~--------~~~v~lmv~d~~~~i~~~~~a---- 86 (228)
T 1h1y_A 21 LAAEADRMVRLGADWLHMDIMDGHFVPNL-TIGAPVIQSLRKHT-KA--------YLDCHLMVTNPSDYVEPLAKA---- 86 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCB-CBCHHHHHHHHTTC-CS--------EEEEEEESSCGGGGHHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCcCcch-hhCHHHHHHHHhhc-CC--------cEEEEEEecCHHHHHHHHHHc----
Confidence 3456777889999999998 4 432 22246677666532 11 1122221122 2346766664
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHH-HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHc--CCcEEe
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIA-RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV--GATTLN 249 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~-~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~a--Ga~~I~ 249 (620)
|.+.|++..-.++ .. .+.++.+++.|+. +.++... .++.+.+ +...+. ++|.|.
T Consensus 87 gad~v~vH~~~~~----------------~~~~~~~~~i~~~g~~-igv~~~p--~t~~e~~----~~~~~~~~~~d~vl 143 (228)
T 1h1y_A 87 GASGFTFHIEVSR----------------DNWQELIQSIKAKGMR-PGVSLRP--GTPVEEV----FPLVEAENPVELVL 143 (228)
T ss_dssp TCSEEEEEGGGCT----------------TTHHHHHHHHHHTTCE-EEEEECT--TSCGGGG----HHHHHSSSCCSEEE
T ss_pred CCCEEEECCCCcc----------------cHHHHHHHHHHHcCCC-EEEEEeC--CCCHHHH----HHHHhcCCCCCEEE
Confidence 8999977654433 11 3566777888875 5454311 2333333 344455 888777
Q ss_pred e----cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 250 I----PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 250 L----~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+ +-+.|...++..-+.++.+++..++ ++|.+ +.|....|.-.++++||+.|
T Consensus 144 ~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~---~pi~v----~GGI~~~ni~~~~~aGaD~v 198 (228)
T 1h1y_A 144 VMTVEPGFGGQKFMPEMMEKVRALRKKYPS---LDIEV----DGGLGPSTIDVAASAGANCI 198 (228)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHHHCTT---SEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred EEeecCCCCcccCCHHHHHHHHHHHHhcCC---CCEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 6 2222444456667778888887642 44543 46777778888899999886
No 49
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.28 E-value=1.1 Score=45.28 Aligned_cols=179 Identities=13% Similarity=0.130 Sum_probs=105.1
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc
Q 007056 78 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC 157 (620)
Q Consensus 78 ~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~ 157 (620)
+|+++| .|-.+-.+...+.+.-++.++.+.+.|.|+|.+|.-++.+++.+.+..+.+.+.... . +| ++.- -.
T Consensus 15 EilN~T-pdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~----~-~p-isID-T~ 86 (271)
T 2yci_X 15 ERINGM-FKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV----D-LP-CCLD-ST 86 (271)
T ss_dssp EEEETT-SHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC----C-CC-EEEE-CS
T ss_pred EecCCC-hhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC----C-Ce-EEEe-CC
Confidence 488888 553333333467799999999999999999999986555566766655554432210 1 12 2222 23
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCC----HH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSD----RK 231 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d----~e 231 (620)
+.+-++.++++. .|.+.|+ ++|- . + ++..++++.++++|.. |...+. .+...+ .+
T Consensus 87 ~~~v~~aal~a~--~Ga~iIN---dvs~---------~--~--d~~~~~~~~~a~~~~~-vv~m~~d~~G~p~t~~~~~~ 147 (271)
T 2yci_X 87 NPDAIEAGLKVH--RGHAMIN---STSA---------D--Q--WKMDIFFPMAKKYEAA-IIGLTMNEKGVPKDANDRSQ 147 (271)
T ss_dssp CHHHHHHHHHHC--CSCCEEE---EECS---------C--H--HHHHHHHHHHHHHTCE-EEEESCBTTBCCCSHHHHHH
T ss_pred CHHHHHHHHHhC--CCCCEEE---ECCC---------C--c--cccHHHHHHHHHcCCC-EEEEecCCCCCCCCHHHHHH
Confidence 666677777763 2666654 3331 0 1 2334667777888885 555443 233344 67
Q ss_pred HHHHHHHHHHHcCCcE--Eeec---CCccccCHHHHHHHHHHHH---HhC-CCCCceeEEEecCC
Q 007056 232 FLYEILGEVIKVGATT--LNIP---DTVGITMPTEFGKLIADIK---ANT-PGIENVVISTHCQN 287 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~--I~L~---DTvG~~~P~~v~~li~~l~---~~~-~~~~~v~i~~H~HN 287 (620)
++.+.++.+.++|... |.|= .++|. +.++-.++++.++ +.. |+ .|+.+=.+|
T Consensus 148 ~l~~~~~~a~~~Gi~~~~IilDPg~gfigk-~~~~~~~~l~~l~~~~~~~~p~---~p~l~G~Sn 208 (271)
T 2yci_X 148 LAMELVANADAHGIPMTELYIDPLILPVNV-AQEHAVEVLETIRQIKLMANPA---PRTVLGLSN 208 (271)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCCCCTTT-STHHHHHHHHHHHHHTTSSSSC---CEEEEEGGG
T ss_pred HHHHHHHHHHHCCCCcccEEEecCCCcccc-CHHHHHHHHHHHHHHHHhCCCC---CCEEEeeCc
Confidence 8888888899999863 4432 22233 3444445555554 334 32 455554444
No 50
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=94.27 E-value=2.4 Score=42.17 Aligned_cols=196 Identities=14% Similarity=0.091 Sum_probs=121.4
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee--c
Q 007056 78 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL--S 155 (620)
Q Consensus 78 ~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~ 155 (620)
..+|-|| .+...|.++..++.+...+.|+..+-+ +|. +++...+.+... . ..+..+.+| +
T Consensus 29 ~~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~-------~v~~a~~~L~~s---~-v~v~tVigFP~G 90 (239)
T 3ngj_A 29 KYIDHTL------LKADATEEQIRKLCSEAAEYKFASVCV-NPT-------WVPLCAELLKGT---G-VKVCTVIGFPLG 90 (239)
T ss_dssp TTEEEEE------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGG-------GHHHHHHHHTTS---S-CEEEEEESTTTC
T ss_pred hhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHH-------HHHHHHHHhCCC---C-CeEEEEeccCCC
Confidence 4677777 233578999999999999999999988 664 344444433221 0 112233444 2
Q ss_pred ccc-hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH
Q 007056 156 RCN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLY 234 (620)
Q Consensus 156 r~~-~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~ 234 (620)
... ..-+..+-+++. .|++.|.+++....+ .....+++.+.+...++.+...-+ .|.+ |.. .-+.+.+.
T Consensus 91 ~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~~~~l-KVIl--Et~-~Lt~eei~ 160 (239)
T 3ngj_A 91 ATPSEVKAYETKVAVE-QGAEEVDMVINIGMV-----KAKKYDDVEKDVKAVVDASGKALT-KVII--ECC-YLTNEEKV 160 (239)
T ss_dssp CSCHHHHHHHHHHHHH-TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHHTTSEE-EEEC--CGG-GSCHHHHH
T ss_pred CCchHHHHHHHHHHHH-cCCCEEEEEeehHHh-----ccccHHHHHHHHHHHHHHhcCCce-EEEE--ecC-CCCHHHHH
Confidence 211 112233344444 499999998875432 235667788888888887764322 3544 433 35678899
Q ss_pred HHHHHHHHcCCcEEeecC--CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 235 EILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 235 ~~~~~~~~aGa~~I~L~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
..++.+.++|||-|--.- +.|.++++.+.-+-+.+...++ +..+==.+ + ...+++-+++||++|=+|
T Consensus 161 ~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~----VKasGGIr-t----~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 161 EVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKAL----VKAAGGIR-T----FDDAMKMINNGASRIGAS 229 (239)
T ss_dssp HHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSE----EEEESSCC-S----HHHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCce----EEEeCCCC-C----HHHHHHHHHhcccceecc
Confidence 999999999999888663 2467888887765555433321 33321112 1 267888899999987443
No 51
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.25 E-value=2.3 Score=40.43 Aligned_cols=157 Identities=17% Similarity=0.127 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee-cccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-SRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-~r~~~~dI~~a~eal~~ag 173 (620)
.+.++-.++++.+.+.|++.||+.+.. +.-.+.++.+.+..+.. .+.+. +-.+.++++.+.++ |
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~--~~~~~~i~~ir~~~~~~---------~~ig~~~v~~~~~~~~a~~~----G 83 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV--PDADTVIKELSFLKEKG---------AIIGAGTVTSVEQCRKAVES----G 83 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHTHHHHHTT---------CEEEEESCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHHCCCC---------cEEEecccCCHHHHHHHHHc----C
Confidence 578889999999999999999997642 33334566666543211 12222 11245555555554 8
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCC
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 253 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DT 253 (620)
.+.| +.+..+ .+.++++++.|+. +.-.. .++.. +..+.++|++.|.+-..
T Consensus 84 ad~i--v~~~~~------------------~~~~~~~~~~g~~-vi~g~-----~t~~e----~~~a~~~Gad~vk~~~~ 133 (205)
T 1wa3_A 84 AEFI--VSPHLD------------------EEISQFCKEKGVF-YMPGV-----MTPTE----LVKAMKLGHTILKLFPG 133 (205)
T ss_dssp CSEE--ECSSCC------------------HHHHHHHHHHTCE-EECEE-----CSHHH----HHHHHHTTCCEEEETTH
T ss_pred CCEE--EcCCCC------------------HHHHHHHHHcCCc-EECCc-----CCHHH----HHHHHHcCCCEEEEcCc
Confidence 8887 444322 2466778888875 43211 23333 34567899998875210
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEe
Q 007056 254 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 254 vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 308 (620)
.+. --+.++.+++.+|+ +++..=.- ....|....+++||+.|-
T Consensus 134 ----~~~-g~~~~~~l~~~~~~---~pvia~GG----I~~~~~~~~~~~Ga~~v~ 176 (205)
T 1wa3_A 134 ----EVV-GPQFVKAMKGPFPN---VKFVPTGG----VNLDNVCEWFKAGVLAVG 176 (205)
T ss_dssp ----HHH-HHHHHHHHHTTCTT---CEEEEBSS----CCTTTHHHHHHHTCSCEE
T ss_pred ----ccc-CHHHHHHHHHhCCC---CcEEEcCC----CCHHHHHHHHHCCCCEEE
Confidence 111 12556667766653 55654332 223588888999998864
No 52
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=94.22 E-value=2 Score=42.23 Aligned_cols=235 Identities=11% Similarity=0.063 Sum_probs=117.0
Q ss_pred HHHHHHhHcCCCEEEEe--cCC------CChhHHHHHHHHHHHhcccccccCCccceEEeecccch-------hhHHHHH
Q 007056 102 DIARQLAKLGVDIIEAG--FPA------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-------RDIKTAW 166 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvG--fP~------~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-------~dI~~a~ 166 (620)
+.++.+.++|++.||+. .|. .++.+.+.++++.+..+-.+..-....+-..-++...+ +.++.++
T Consensus 16 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i 95 (285)
T 1qtw_A 16 NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEM 95 (285)
T ss_dssp HHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHH
Confidence 44566678899999992 121 23355666766665433221000000000001111111 2334455
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHH--HHcCCCEEEEcCCCC----CCCCHHHHHHHHHHH
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA--RSLGCDDVEFSPEDA----GRSDRKFLYEILGEV 240 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a--~~~G~~~V~f~~ed~----~r~d~e~l~~~~~~~ 240 (620)
+.....|.+.|.+...... -..+.++.++.+.+.++.+ ++.|+. +.+-+... .-.+++.+.++++.+
T Consensus 96 ~~A~~lGa~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 168 (285)
T 1qtw_A 96 QRCEQLGLSLLNFHPGSHL------MQISEEDCLARIAESINIALDKTQGVT-AVIENTAGQGSNLGFKFEHLAAIIDGV 168 (285)
T ss_dssp HHHHHTTCCEEEECCCBCT------TTSCHHHHHHHHHHHHHHHHHHCSSCE-EEEECCCCCTTBCCSSHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHhccCCCE-EEEecCCCCCCcccCCHHHHHHHHHhh
Confidence 6556678888866433221 1125666666666666654 335653 44422211 124677787777754
Q ss_pred HHcCCcEEee-cCC-----ccc--cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 241 IKVGATTLNI-PDT-----VGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 241 ~~aGa~~I~L-~DT-----vG~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
. +...+.+ -|| .|. ..|+.+.+.++.+.+.++. +-...+|.||..+- .|...-. -.
T Consensus 169 ~--~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~--~~i~~vH~~D~~~~----------~~~~~~~--h~ 232 (285)
T 1qtw_A 169 E--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGF--KYLRGMHLNDAKST----------FGSRVDR--HH 232 (285)
T ss_dssp S--CGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCCCCC--EE
T ss_pred c--CccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCc--cceeEEEEecCCCc----------ccCCccc--cc
Confidence 1 3223332 255 232 2456677788877766531 13568999976541 0111000 01
Q ss_pred cccCCcCcccHHHHHHHHHhcccccc-CccccCCChhhHHHHHHHHHHHhC
Q 007056 313 GIGERAGNASLEEVVMAFKCRGEHIL-GGLYTGINTRHIVMASKMVEEYTG 362 (620)
Q Consensus 313 GlGERaGNa~lEevv~~L~~~~~~~~-~G~~t~idl~~L~~~s~~v~~~~g 362 (620)
.+| .|..+.+.++..|+..+++-. ..++. .+.+.+.+--+++.++.+
T Consensus 233 ~~G--~G~id~~~~~~~L~~~gy~g~~~~lE~-~~~~~~~~s~~~lr~~~~ 280 (285)
T 1qtw_A 233 SLG--EGNIGHDAFRWIMQDDRFDGIPLILET-INPDIWAEEIAWLKAQQT 280 (285)
T ss_dssp CTT--TSSSCSHHHHHHHTCGGGTTSEEEECC-SCGGGHHHHHHHHHHHTT
T ss_pred CCC--CCCCCHHHHHHHHhccCcCCCCEEEec-CCCcchHHHHHHHHHHHh
Confidence 234 388999999999987653210 11222 134555555566665543
No 53
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=93.96 E-value=0.54 Score=46.91 Aligned_cols=194 Identities=18% Similarity=0.143 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe---cCCCChhHHHHHHHHHHHhcccccccCCccceE-Ee------ecccch-----
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAG---FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI-CG------LSRCNE----- 159 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvG---fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i-~~------~~r~~~----- 159 (620)
.+.++. ++.+.++|++.||+. +|..++.+.+.++.+.+.. ++.... .+ ++...+
T Consensus 17 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~--------gl~i~~~~~~~~~~~l~~~d~~~r~~ 85 (294)
T 3vni_A 17 ADYKYY---IEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGN--------GITLTVGHGPSAEQNLSSPDPDIRKN 85 (294)
T ss_dssp CCHHHH---HHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHT--------TCEEEEEECCCGGGCTTCSCHHHHHH
T ss_pred cCHHHH---HHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHc--------CCeEEEeecCCCCcCCCCCCHHHHHH
Confidence 355554 555667799999997 4444566677777766653 222111 11 111111
Q ss_pred --hhHHHHHHHHhcCCCCEEEEE-ecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCEEEEcCCC----CCCC
Q 007056 160 --RDIKTAWEAVKYAKRPRIHTF-IATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFSPED----AGRS 228 (620)
Q Consensus 160 --~dI~~a~eal~~ag~~~v~i~-~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~a~~~G~~~V~f~~ed----~~r~ 228 (620)
+.++++++.....|.+.|.+. .+.+... ..-+.+ .+...+.+.++.++|++.|+. +.+-+.. ..-.
T Consensus 86 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~ 162 (294)
T 3vni_A 86 AKAFYTDLLKRLYKLDVHLIGGALYSYWPID--YTKTIDKKGDWERSVESVREVAKVAEACGVD-FCLEVLNRFENYLIN 162 (294)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESTTSCSSCC--TTSCCCHHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHHhCCCeeeccccCCCCCc--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccC
Confidence 234445555555688888642 2211100 000123 344556667778888899974 6553321 1224
Q ss_pred CHHHHHHHHHHHHHcCCcEEeec-CCccccCH-HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 229 DRKFLYEILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
+++.+.++++.+ +...+.++ ||.=...- ....+.++.+.. -...+|.+|...
T Consensus 163 ~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~r---------------- 216 (294)
T 3vni_A 163 TAQEGVDFVKQV---DHNNVKVMLDTFHMNIEEDSIGGAIRTAGS-------YLGHLHTGECNR---------------- 216 (294)
T ss_dssp SHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEECCTTS----------------
T ss_pred CHHHHHHHHHHc---CCCCEEEEEEhhhhHHcCCCHHHHHHHhhh-------hEeEEEeCCCCC----------------
Confidence 677777777754 43334333 55221110 112233333322 346899999521
Q ss_pred EeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 307 VEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 307 Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
... | .|+.+...++..|+..++
T Consensus 217 ---~~p--G--~G~id~~~~~~~L~~~gy 238 (294)
T 3vni_A 217 ---KVP--G--RGRIPWVEIGEALADIGY 238 (294)
T ss_dssp ---CCT--T--SSSCCHHHHHHHHHHTTC
T ss_pred ---CCC--C--CCCcCHHHHHHHHHHhCC
Confidence 122 3 589999999999998653
No 54
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.88 E-value=1.8 Score=41.36 Aligned_cols=158 Identities=16% Similarity=0.146 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeec-ccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~~dI~~a~eal~~ag 173 (620)
.+.++-.++++.+.+.|++.||+..+. +...+.++.+++..+. +.+.+.+ -.+.++++.+++ +|
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~--~~~~~~i~~i~~~~~~---------~l~vg~g~~~~~~~i~~a~~----~G 80 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS--PQWEQSIPAIVDAYGD---------KALIGAGTVLKPEQVDALAR----MG 80 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS--TTHHHHHHHHHHHHTT---------TSEEEEECCCSHHHHHHHHH----TT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHhCCC---------CeEEEeccccCHHHHHHHHH----cC
Confidence 467788999999999999999998763 4445677777664321 1222211 123445666655 48
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCC
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 253 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DT 253 (620)
.+.|++ +..+ .+.++.++++|.. +..++ .+++.+ ..+.+.|+|.|.+--|
T Consensus 81 ad~V~~--~~~~------------------~~~~~~~~~~g~~-~~~g~-----~t~~e~----~~a~~~G~d~v~v~~t 130 (212)
T 2v82_A 81 CQLIVT--PNIH------------------SEVIRRAVGYGMT-VCPGC-----ATATEA----FTALEAGAQALKIFPS 130 (212)
T ss_dssp CCEEEC--SSCC------------------HHHHHHHHHTTCE-EECEE-----CSHHHH----HHHHHTTCSEEEETTH
T ss_pred CCEEEe--CCCC------------------HHHHHHHHHcCCC-EEeec-----CCHHHH----HHHHHCCCCEEEEecC
Confidence 998872 2211 1345677888864 43332 344443 3456789999886322
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEe
Q 007056 254 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 254 vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 308 (620)
- | .--+.++.+++.++. +++|.. +-|....|....+++||+.|-
T Consensus 131 ~----~-~g~~~~~~l~~~~~~--~ipvia----~GGI~~~~i~~~~~~Ga~gv~ 174 (212)
T 2v82_A 131 S----A-FGPQYIKALKAVLPS--DIAVFA----VGGVTPENLAQWIDAGCAGAG 174 (212)
T ss_dssp H----H-HCHHHHHHHHTTSCT--TCEEEE----ESSCCTTTHHHHHHHTCSEEE
T ss_pred C----C-CCHHHHHHHHHhccC--CCeEEE----eCCCCHHHHHHHHHcCCCEEE
Confidence 1 1 112556666665541 244443 244555688888899999886
No 55
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=93.86 E-value=1.1 Score=48.38 Aligned_cols=200 Identities=12% Similarity=0.015 Sum_probs=122.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCE-EEEecC---------CCChhHH-HHHHHHHHHhcccccccCCccceEEeecccch---
Q 007056 94 TLTSKEKLDIARQLAKLGVDI-IEAGFP---------AASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNE--- 159 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~-IEvGfP---------~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~--- 159 (620)
..+.+.-..+++.-.+.+-.. ||+..- +..|.++ .+++.+++..+..+ + +.+..+--...
T Consensus 28 ~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv--~----pV~LhlDHg~~~~w 101 (450)
T 3txv_A 28 SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPR--E----KILLGGDHLGPNPW 101 (450)
T ss_dssp CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCG--G----GEEEEEEEESSGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCc--c----cEEEECCCCCCccc
Confidence 467888888999999999884 466421 1123454 56777777532110 0 12333322211
Q ss_pred ----------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC----CEEE--EcCC
Q 007056 160 ----------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC----DDVE--FSPE 223 (620)
Q Consensus 160 ----------~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~----~~V~--f~~e 223 (620)
...+...+++ .+|...|++=.|..+. +.+..+|.+-+.++..+++++|++.+. ..+. .+-|
T Consensus 102 ~~~~~~~am~~a~e~i~~aI-~AGFtSVMiD~S~~p~--eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtE 178 (450)
T 3txv_A 102 KHLPADEAMAKAEAMITAYA-KAGFTKLHLDTSMGCA--GEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTE 178 (450)
T ss_dssp TTSCHHHHHHHHHHHHHHHH-TTTCCEEEECCCBCCS--SSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC
T ss_pred ccccHHHHHHHHHHHHHHHH-HcCCCEEEECCCCCch--hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeee
Confidence 1122222332 3699999875554442 557788999889999999999998533 2122 3554
Q ss_pred CC------------CCCCHHHHHHHHHH----HHHcCCc-----EEeecCCcccc---------CHHHHHHHHHHHHHhC
Q 007056 224 DA------------GRSDRKFLYEILGE----VIKVGAT-----TLNIPDTVGIT---------MPTEFGKLIADIKANT 273 (620)
Q Consensus 224 d~------------~r~d~e~l~~~~~~----~~~aGa~-----~I~L~DTvG~~---------~P~~v~~li~~l~~~~ 273 (620)
+. ..|+|+.+.+.++. +.+.|.+ .+.|+=-.|.. .|+. .+.|++.+
T Consensus 179 vpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~----~~~L~~~v 254 (450)
T 3txv_A 179 VPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRAR----AEKLSATL 254 (450)
T ss_dssp -------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTT----TSHHHHGG
T ss_pred cCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHH----HHHHHHHh
Confidence 41 36888877777764 4445653 34444334433 2333 33444444
Q ss_pred CCCCcee-EEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 274 PGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 274 ~~~~~v~-i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
+ ++| |.+|.|++-|..-.|-..+++.|...+++
T Consensus 255 ~---~~P~LVlhghStDy~~~e~l~~~V~~GiaklNV 288 (450)
T 3txv_A 255 G---QLHGMVFEAHSTDYQTPDALRELVADGFAILKV 288 (450)
T ss_dssp G---TSTTCEEEESCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred c---cCCCEEEecCCCCCCCHHHHHHHHHcCCcEEEE
Confidence 2 245 99999999999999999999999998865
No 56
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=93.83 E-value=0.39 Score=46.83 Aligned_cols=215 Identities=20% Similarity=0.191 Sum_probs=111.8
Q ss_pred EEEeCCCccc--CCCCCCCCCH----HHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhcccccccCCc
Q 007056 78 RVFDTTLRDG--EQSPGATLTS----KEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGY 147 (620)
Q Consensus 78 ~I~DtTLRDG--~Qs~g~~fs~----~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l 147 (620)
.|.-..+||| .-..|+.+.. ++-+++++.|.+.|++.|++--+... +..++.++.+++...
T Consensus 7 iip~id~~~g~~~~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~--------- 77 (253)
T 1h5y_A 7 IIPCLDIDGGAKVVVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS--------- 77 (253)
T ss_dssp EEEEEEECGGGCEECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS---------
T ss_pred EEEEEEEcCCceEEEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC---------
Confidence 3445557888 4334544432 35678999999999999998633221 234677777776531
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE--EEEcCC--
Q 007056 148 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEFSPE-- 223 (620)
Q Consensus 148 ~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~--V~f~~e-- 223 (620)
.|.+....-...++++.++++ |++.|++-.. .+.......+.++.+|.+. +..++-
T Consensus 78 ipvi~~g~i~~~~~~~~~~~~----Gad~V~i~~~----------------~~~~~~~~~~~~~~~g~~~i~~~~~~~~~ 137 (253)
T 1h5y_A 78 IPVLVGGGVRSLEDATTLFRA----GADKVSVNTA----------------AVRNPQLVALLAREFGSQSTVVAIDAKWN 137 (253)
T ss_dssp SCEEEESSCCSHHHHHHHHHH----TCSEEEESHH----------------HHHCTHHHHHHHHHHCGGGEEEEEEEEEC
T ss_pred CCEEEECCCCCHHHHHHHHHc----CCCEEEEChH----------------HhhCcHHHHHHHHHcCCCcEEEEEEeecC
Confidence 244443333345666665554 8888876421 1111111223334455321 111110
Q ss_pred --------CCCCC-CHHHHHHHHHHHHHcCCcEEee--cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH
Q 007056 224 --------DAGRS-DRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 292 (620)
Q Consensus 224 --------d~~r~-d~e~l~~~~~~~~~aGa~~I~L--~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 292 (620)
..+.. ......+.++.+.+.|++.|.+ .+..|..... -.+.++.+++..+ ++|-.= .|..
T Consensus 138 ~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~----~pvia~----GGi~ 208 (253)
T 1h5y_A 138 GEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVR----IPVIAS----GGAG 208 (253)
T ss_dssp SSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCS----SCEEEE----SCCC
T ss_pred CCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcC----CCEEEe----CCCC
Confidence 01110 0012345567778899999887 3433332111 1245566665542 333322 4444
Q ss_pred -HHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhc
Q 007056 293 -TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 333 (620)
Q Consensus 293 -vANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~ 333 (620)
..|...++++||+.|-..=.=+ + +.-+++++...|+..
T Consensus 209 ~~~~~~~~~~~Ga~~v~vgsal~--~-~~~~~~~~~~~l~~~ 247 (253)
T 1h5y_A 209 RVEHFYEAAAAGADAVLAASLFH--F-RVLSIAQVKRYLKER 247 (253)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHH--T-TSSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCcHHHHHHHHH--c-CCCCHHHHHHHHHHc
Confidence 3788888889998763221001 1 223577777777764
No 57
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.82 E-value=0.2 Score=48.84 Aligned_cols=166 Identities=16% Similarity=0.140 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~ag 173 (620)
.+.++-+++++.+ +-|+|.+|+|||-.-..-.+.++.+++...+. +.+.-+-- -.. ....+.+..+|
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~--------~i~ld~~l~d~p---~~~~~~~~~aG 83 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNH--------ILVCDMKTTDGG---AILSRMAFEAG 83 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTS--------EEEEEEEECSCH---HHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCC--------cEEEEEeecccH---HHHHHHHHhcC
Confidence 5788899999997 56999999998743222246777777652111 11211110 111 11223334458
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE---EcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE---FSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~---f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
++.|.+..-..+ +.+.++++.++++|+. +. .++ .+++.+.+ +.+.|++.+.+
T Consensus 84 ad~i~vh~~~~~---------------~~~~~~~~~~~~~g~~-~~~d~l~~-----~T~~~~~~----~~~~g~d~v~~ 138 (218)
T 3jr2_A 84 ADWITVSAAAHI---------------ATIAACKKVADELNGE-IQIEIYGN-----WTMQDAKA----WVDLGITQAIY 138 (218)
T ss_dssp CSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEECCSS-----CCHHHHHH----HHHTTCCEEEE
T ss_pred CCEEEEecCCCH---------------HHHHHHHHHHHHhCCc-cceeeeec-----CCHHHHHH----HHHcCccceee
Confidence 998766433221 2345677778888875 43 233 23443333 34569997655
Q ss_pred c-----CCccc-cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 251 P-----DTVGI-TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 251 ~-----DTvG~-~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
. .+.|. ..|..+ +.++.++. + ++++.+ +.|--..|.-.++++||+.|
T Consensus 139 ~~~~~~~~~g~~~~~~~l-~~i~~~~~--~---~~pi~v----~GGI~~~~~~~~~~aGAd~v 191 (218)
T 3jr2_A 139 HRSRDAELAGIGWTTDDL-DKMRQLSA--L---GIELSI----TGGIVPEDIYLFEGIKTKTF 191 (218)
T ss_dssp ECCHHHHHHTCCSCHHHH-HHHHHHHH--T---TCEEEE----ESSCCGGGGGGGTTSCEEEE
T ss_pred eeccccccCCCcCCHHHH-HHHHHHhC--C---CCCEEE----ECCCCHHHHHHHHHcCCCEE
Confidence 1 11132 234433 33444443 1 233443 23333456667899998886
No 58
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=93.82 E-value=0.58 Score=45.67 Aligned_cols=191 Identities=15% Similarity=0.112 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe----ec------ccc------
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----LS------RCN------ 158 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~------r~~------ 158 (620)
.+.++.+ +.+.++|++.||+.+|. +.+.+.++++.+..+-.+ ..+.. |. -..
T Consensus 15 ~~~~~~l---~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (260)
T 1k77_A 15 VPFIERF---AAARKAGFDAVEFLFPY--NYSTLQIQKQLEQNHLTL-------ALFNTAPGDINAGEWGLSALPGREHE 82 (260)
T ss_dssp SCGGGHH---HHHHHHTCSEEECSCCT--TSCHHHHHHHHHHTTCEE-------EEEECCCCCGGGTCSCSTTCTTCHHH
T ss_pred CCHHHHH---HHHHHhCCCEEEecCCC--CCCHHHHHHHHHHcCCce-------EEEecCCcccccccCCCCCChhHHHH
Confidence 4555555 45566799999998763 234555666655432211 11111 10 001
Q ss_pred -hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHH----HHHHHHHHHHHHHHHcCCCEEEEcCCC------CCC
Q 007056 159 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ----QVVEIARSMVKFARSLGCDDVEFSPED------AGR 227 (620)
Q Consensus 159 -~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~e----e~l~~~~~~v~~a~~~G~~~V~f~~ed------~~r 227 (620)
.+.++++++.....|.+.|.+.....+ -+.+.+ ...+.+.++.++|++.|+. +.+-+.. ..-
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~ 155 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKR-ILVEALSPGVKPHYLF 155 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEeCCccCCCcCcc
Confidence 123456666666779888866433211 012333 4455666677788888874 6553321 123
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec-CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.+++.+.++++.+ +...+.++ ||.=.. -.. .+....+++. .+ -...+|+||..| +
T Consensus 156 ~~~~~~~~l~~~~---~~~~~g~~~D~~h~~-~~~-~d~~~~l~~~-~~---~i~~vH~~D~~~--------------r- 211 (260)
T 1k77_A 156 SSQYQALAIVEEV---ARDNVFIQLDTFHAQ-KVD-GNLTHLIRDY-AG---KYAHVQIAGLPD--------------R- 211 (260)
T ss_dssp CSHHHHHHHHHHH---CCTTEEEEEEHHHHH-HHT-CCHHHHHHHT-TT---SEEEEEECCTTT--------------C-
T ss_pred CCHHHHHHHHHHh---CCCCEEEEeeHHHHH-hhC-CCHHHHHHHh-hh---heeEEEECCCCC--------------C-
Confidence 4667777776654 43333333 542111 000 1122333332 22 346889988643 1
Q ss_pred EeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 307 VEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 307 Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.-+| .|..+..+++..|+..++
T Consensus 212 -----~~~G--~G~id~~~~~~~L~~~gy 233 (260)
T 1k77_A 212 -----HEPD--DGEINYPWLFRLFDEVGY 233 (260)
T ss_dssp -----CCSS--SSSSCHHHHHHHHHHTTC
T ss_pred -----CCCC--CCccCHHHHHHHHHHcCC
Confidence 1234 589999999999998653
No 59
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.71 E-value=1.8 Score=42.30 Aligned_cols=200 Identities=13% Similarity=0.054 Sum_probs=110.0
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--------------CCChhHHHHHHHHHHHhcccc
Q 007056 76 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------------AASKEDFEAVRTIAKEVGNAV 141 (620)
Q Consensus 76 ~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP--------------~~s~~d~e~v~~i~~~~~~~~ 141 (620)
++=+.--|+|+ ++.++ .++.+.++|++.||+... ..++.+.+.++.+.+..
T Consensus 11 klg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 75 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FPLTE---ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASK---- 75 (262)
T ss_dssp EEEEEGGGGTT--------SCHHH---HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHT----
T ss_pred EEEEEecccCC--------CCHHH---HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHc----
Confidence 45556666665 35555 455567789999999631 12355566666666543
Q ss_pred cccCCcc-ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Q 007056 142 DAESGYV-PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 220 (620)
Q Consensus 142 ~~~~~l~-~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f 220 (620)
++. ..+........+.++.+++.....|.+.|.+... .+. ..++.++|++.|+. +.+
T Consensus 76 ----gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~--------------~~~---~~~l~~~a~~~gv~-l~~ 133 (262)
T 3p6l_A 76 ----GIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA--------------LSD---WDLVEKLSKQYNIK-ISV 133 (262)
T ss_dssp ----TCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC--------------GGG---HHHHHHHHHHHTCE-EEE
T ss_pred ----CCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC--------------HHH---HHHHHHHHHHhCCE-EEE
Confidence 331 2222332234567788888777789998877522 122 24667888999974 555
Q ss_pred cCCCC-CC-CCHHHHHHHHHHHHHcCCcEEeec-CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 221 SPEDA-GR-SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 221 ~~ed~-~r-~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
-+... +. .+++.+.++++. +...+.++ ||.=...-. .+....+++ +.+ -...+|++|..--.
T Consensus 134 En~~~~~~~~~~~~~~~ll~~----~~~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~---~i~~vH~~D~~~~~----- 198 (262)
T 3p6l_A 134 HNHPQPSDYWKPENLLKAISG----RSQSLGSCSDVGHWRREG--LNQIDCLKQ-LKG---RIISLHFKDIAPKK----- 198 (262)
T ss_dssp ECCSSSSSSSSHHHHHHHHTT----SCTTEEEEEEHHHHHHTT--CCHHHHHHH-TTT---CEEEEEECEECCCC-----
T ss_pred EeCCCccccCCHHHHHHHHHh----CCCceEEEechHHHHhcC--CCHHHHHHH-Hhh---hheEEeeccCCccc-----
Confidence 33222 21 367777777752 33333333 543211000 012333343 332 34688999865100
Q ss_pred HHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 298 AGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 298 aAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.|...-+ -..+| .|+.+...++..|+..++
T Consensus 199 ----~~~~~~~--~~~~G--~G~id~~~~~~~l~~~gy 228 (262)
T 3p6l_A 199 ----AGENEQH--DVIWG--TGILDVKGMLKELKSQNF 228 (262)
T ss_dssp ----TTCSCCC--EECTT--SSSSCHHHHHHHHHHTTC
T ss_pred ----cCcCccc--cCCCC--CCccCHHHHHHHHHHCCC
Confidence 0111111 12234 599999999999998764
No 60
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.69 E-value=0.95 Score=44.56 Aligned_cols=154 Identities=14% Similarity=0.084 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..+.. ..-.+. -...++++.++++ |.+
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~igagt-vl~~d~~~~A~~a----GAd 100 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLR--SQHGLKAIQVLREQRPEL--------CVGAGT-VLDRSMFAAVEAA----GAQ 100 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESS--STHHHHHHHHHHHHCTTS--------EEEEEC-CCSHHHHHHHHHH----TCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecC--CccHHHHHHHHHHhCccc--------EEeeCe-EeeHHHHHHHHHC----CCC
Confidence 5667789999999999999999863 455567888888764321 112222 2355677777776 788
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 255 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG 255 (620)
-||. +..+ .+.++.++.+|.. +..++ .+++.+ ..+.++|+|.|.+
T Consensus 101 ~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~vk~----- 145 (225)
T 1mxs_A 101 FVVT--PGIT------------------EDILEAGVDSEIP-LLPGI-----STPSEI----MMGYALGYRRFKL----- 145 (225)
T ss_dssp SEEC--SSCC------------------HHHHHHHHHCSSC-EECEE-----CSHHHH----HHHHTTTCCEEEE-----
T ss_pred EEEe--CCCC------------------HHHHHHHHHhCCC-EEEee-----CCHHHH----HHHHHCCCCEEEE-----
Confidence 8873 2221 2567888888875 32232 334433 3456789998877
Q ss_pred ccCHHH-H--HHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEEe
Q 007056 256 ITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 308 (620)
Q Consensus 256 ~~~P~~-v--~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd 308 (620)
.|.+ + -+.++.++..+|+ +++-. .-|.-..|.-.-+. +|++.|=
T Consensus 146 --FPa~~~~G~~~lk~i~~~~~~---ipvva----iGGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 146 --FPAEISGGVAAIKAFGGPFGD---IRFCP----TGGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp --TTHHHHTHHHHHHHHHTTTTT---CEEEE----BSSCCTTTHHHHHHSTTBCCEE
T ss_pred --ccCccccCHHHHHHHHhhCCC---CeEEE----ECCCCHHHHHHHHhccCCEEEE
Confidence 4432 3 3677888877764 44422 13444557777788 6877653
No 61
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.67 E-value=2.1 Score=42.71 Aligned_cols=171 Identities=13% Similarity=0.054 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-----------hhhHHHH
Q 007056 97 SKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-----------ERDIKTA 165 (620)
Q Consensus 97 ~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-----------~~dI~~a 165 (620)
.++-.++++.+.+.|++.|.+ .| ..++.+.+.. . +-.+.+..+.... ...++.+
T Consensus 44 ~~~~~~~~~~~~~~g~~~i~~-~~-------~~~~~~~~~~----~---~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a 108 (273)
T 2qjg_A 44 LIDIRKTVNDVAEGGANAVLL-HK-------GIVRHGHRGY----G---KDVGLIIHLSGGTAISPNPLKKVIVTTVEEA 108 (273)
T ss_dssp SSSHHHHHHHHHHHTCSEEEE-CH-------HHHHSCCCSS----S---CCCEEEEECEECCTTSSSTTCCEECSCHHHH
T ss_pred hhhHHHHHHHHHhcCCCEEEe-CH-------HHHHHHHHhh----c---CCCCEEEEEcCCCcCCCCcccchHHHHHHHH
Confidence 344458899999999999986 22 1222211111 0 1123333332211 3445555
Q ss_pred HHHHhcCCCCEE--EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE--cCCCCC----CCCHHHHHHHH
Q 007056 166 WEAVKYAKRPRI--HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPEDAG----RSDRKFLYEIL 237 (620)
Q Consensus 166 ~eal~~ag~~~v--~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f--~~ed~~----r~d~e~l~~~~ 237 (620)
++ +|++.| .+..... +.++.++.+.++++.+++.|.. +.. .+ ++. ..+++.+.+.+
T Consensus 109 ~~----~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~-viv~~~~-~G~~l~~~~~~~~~~~~a 172 (273)
T 2qjg_A 109 IR----MGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMP-LIAMMYP-RGKHIQNERDPELVAHAA 172 (273)
T ss_dssp HH----TTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCC-EEEEEEE-CSTTCSCTTCHHHHHHHH
T ss_pred HH----cCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCC-EEEEeCC-CCcccCCCCCHhHHHHHH
Confidence 54 489988 6555532 4567888999999999999976 322 22 221 14556677777
Q ss_pred HHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCC---cchHHHHHHHHHHhcCcEEee
Q 007056 238 GEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND---LGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 238 ~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND---~GlAvANslaAv~aGA~~Vd~ 309 (620)
+.+.++|+|.|.+.-+ ..++ +++.+++..+ +|+-.|+=-+ .--++.-...++++||+.|-.
T Consensus 173 ~~a~~~Gad~i~~~~~---~~~~----~l~~i~~~~~----ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 173 RLGAELGADIVKTSYT---GDID----SFRDVVKGCP----APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHHHHTTCSEEEECCC---SSHH----HHHHHHHHCS----SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHcCCCEEEECCC---CCHH----HHHHHHHhCC----CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 8899999998887643 2233 4555555542 5566665222 222333366677899987643
No 62
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=93.62 E-value=0.81 Score=44.87 Aligned_cols=201 Identities=12% Similarity=0.129 Sum_probs=104.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec--CCC---ChhHHHHHHHHHHHhcccccccCCccc-eEEeeccc---c---hhhH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGF--PAA---SKEDFEAVRTIAKEVGNAVDAESGYVP-VICGLSRC---N---ERDI 162 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~---s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~~~r~---~---~~dI 162 (620)
++.++. ++.+.++|++.||+.. |.. ...+.+.++++.+.. ++.. .+.+.... . .+.+
T Consensus 19 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~--------gl~~~~~~~~~~~~~~~~~~~~~~ 87 (272)
T 2q02_A 19 LSIEAF---FRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKY--------GLEIVTINAVYPFNQLTEEVVKKT 87 (272)
T ss_dssp SCHHHH---HHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHT--------TCEEEEEEEETTTTSCCHHHHHHH
T ss_pred CCHHHH---HHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHc--------CCeEEechhhhccCCcHHHHHHHH
Confidence 455555 4555678999999963 211 233456666666543 2211 22221111 1 2334
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCEEEEcCCC---CCCCCHHHHHHHHH
Q 007056 163 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILG 238 (620)
Q Consensus 163 ~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~-l~~~~~~v~~a~~~G~~~V~f~~ed---~~r~d~e~l~~~~~ 238 (620)
+++++.....|.+.|.+...... ....+.. .+.+.++.++|++.|+. +.+-+.. ..-.+++.+.++++
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~~ 159 (272)
T 2q02_A 88 EGLLRDAQGVGARALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLIR 159 (272)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHHH
Confidence 55555555568888766432211 0344566 77888888999999874 6553321 22346677777776
Q ss_pred HHHHcCCcEEeec-CCccccC--HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 239 EVIKVGATTLNIP-DTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 239 ~~~~aGa~~I~L~-DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
.+ + ..+.++ ||.=... -.+ .+.++.+. . +-...+|.||..+.. .+...-+.-..-+|
T Consensus 160 ~v---~-~~~g~~~D~~h~~~~~~~~-~~~~~~l~---~---~~i~~vH~~D~~~~~---------~~~~~~~~~~~~~G 219 (272)
T 2q02_A 160 EA---G-SPFKVLLDTFHHHLYEEAE-KEFASRID---I---SAIGLVHLSGVEDTR---------PTEALADEQRIMLS 219 (272)
T ss_dssp HH---T-CCCEEEEEHHHHHHCTTHH-HHHHHHCC---G---GGEEEEEECBCCCCS---------CGGGCCGGGCBCCC
T ss_pred Hh---C-cCeEEEEEchHhhccCCCc-hhhhhhCC---H---hHEEEEEeCCCcCCC---------CchhccccccccCC
Confidence 55 3 333332 6532221 011 13333332 1 245688988864311 00000011111223
Q ss_pred CCcCcccHHHHHHHHHhccc
Q 007056 316 ERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 316 ERaGNa~lEevv~~L~~~~~ 335 (620)
++ |+.+...++..|+..++
T Consensus 220 ~G-~~id~~~~~~~L~~~gy 238 (272)
T 2q02_A 220 EK-DVMQNYQQVQRLENMGY 238 (272)
T ss_dssp TT-CSSCHHHHHHHHHHTTC
T ss_pred CC-CcccHHHHHHHHHhcCC
Confidence 31 37899999999998664
No 63
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.57 E-value=1.5 Score=45.95 Aligned_cols=177 Identities=13% Similarity=0.126 Sum_probs=107.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe--------cCCC----------Ch--------hHHHHHHHHHHHhcccccccCCcc
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAG--------FPAA----------SK--------EDFEAVRTIAKEVGNAVDAESGYV 148 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvG--------fP~~----------s~--------~d~e~v~~i~~~~~~~~~~~~~l~ 148 (620)
=+.+.-+++++...++|.|.+=.+ .|.+ +. -.++..+.|.+..... |+.
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-----Gi~ 106 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-----GMI 106 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT-----TCE
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh-----CCe
Confidence 389999999999999999999988 2321 00 0123333343322111 332
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC
Q 007056 149 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS 228 (620)
Q Consensus 149 ~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~ 228 (620)
..-.. ...++++... ..+++.+.| ++.++. ++ ++++++.+.|.. |..+- +.+
T Consensus 107 ~~st~---~d~~svd~l~----~~~v~~~KI--~S~~~~-----------n~----~LL~~va~~gkP-viLst---Gma 158 (349)
T 2wqp_A 107 FISTL---FSRAAALRLQ----RMDIPAYKI--GSGECN-----------NY----PLIKLVASFGKP-IILST---GMN 158 (349)
T ss_dssp EEEEE---CSHHHHHHHH----HHTCSCEEE--CGGGTT-----------CH----HHHHHHHTTCSC-EEEEC---TTC
T ss_pred EEEee---CCHHHHHHHH----hcCCCEEEE--Cccccc-----------CH----HHHHHHHhcCCe-EEEEC---CCC
Confidence 11111 2344444332 236676665 333222 12 345666667875 77754 335
Q ss_pred CHHHHHHHHHHHHHcCCcEEeec-CCccccCHHHHHH--HHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCc
Q 007056 229 DRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGK--LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P~~v~~--li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 305 (620)
+.+.+...++.+.+.|. .|.|| =|.++-+|.+..+ .|..+++.+|+ ++|++=-|- .| .+-+++|+.+||+
T Consensus 159 t~~Ei~~Ave~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~---lpVg~sdHt-~G--~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 159 SIESIKKSVEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPD---AIIGLSDHT-LD--NYACLGAVALGGS 231 (349)
T ss_dssp CHHHHHHHHHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTT---SEEEEECCS-SS--SHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHCCC---CCEEeCCCC-Cc--HHHHHHHHHhCCC
Confidence 88888888888888888 44443 3555655655544 47888998863 678875565 34 7888999999999
Q ss_pred EEeecc
Q 007056 306 QVEVTI 311 (620)
Q Consensus 306 ~Vd~Ti 311 (620)
.|+.=+
T Consensus 232 iIEkH~ 237 (349)
T 2wqp_A 232 ILERHF 237 (349)
T ss_dssp EEEEEB
T ss_pred EEEeCC
Confidence 986543
No 64
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.54 E-value=0.96 Score=44.47 Aligned_cols=154 Identities=16% Similarity=0.187 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
.+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..++. ..-.+. -...++++.++++ |.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~l--------~vgaGt-vl~~d~~~~A~~a----GA 90 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR--SEAAADAIRLLRANRPDF--------LIAAGT-VLTAEQVVLAKSS----GA 90 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTC--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc--CchHHHHHHHHHHhCcCc--------EEeeCc-EeeHHHHHHHHHC----CC
Confidence 45667789999999999999999863 445567888888764321 111222 2245677777776 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 254 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv 254 (620)
+-||. +..+ .+.++.++++|.. +..++ .++..+ ..+.++|+|.|.+
T Consensus 91 d~v~~--p~~d------------------~~v~~~ar~~g~~-~i~Gv-----~t~~e~----~~A~~~Gad~vk~---- 136 (224)
T 1vhc_A 91 DFVVT--PGLN------------------PKIVKLCQDLNFP-ITPGV-----NNPMAI----EIALEMGISAVKF---- 136 (224)
T ss_dssp SEEEC--SSCC------------------HHHHHHHHHTTCC-EECEE-----CSHHHH----HHHHHTTCCEEEE----
T ss_pred CEEEE--CCCC------------------HHHHHHHHHhCCC-EEecc-----CCHHHH----HHHHHCCCCEEEE----
Confidence 88863 3221 2467788888875 32232 234443 3456899998876
Q ss_pred cccCHHH-H--HHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh-cCcEE
Q 007056 255 GITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 307 (620)
Q Consensus 255 G~~~P~~-v--~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a-GA~~V 307 (620)
.|.+ + -+.++.+++.+|+ +++.. .-|.-..|.-.-+.+ |+..|
T Consensus 137 ---Fpa~~~gG~~~lk~l~~~~~~---ipvva----iGGI~~~N~~~~l~agga~~v 183 (224)
T 1vhc_A 137 ---FPAEASGGVKMIKALLGPYAQ---LQIMP----TGGIGLHNIRDYLAIPNIVAC 183 (224)
T ss_dssp ---TTTTTTTHHHHHHHHHTTTTT---CEEEE----BSSCCTTTHHHHHTSTTBCCE
T ss_pred ---eeCccccCHHHHHHHHhhCCC---CeEEE----ECCcCHHHHHHHHhcCCCEEE
Confidence 2211 1 3667778877764 44422 134445577777777 65544
No 65
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.52 E-value=2.7 Score=42.23 Aligned_cols=175 Identities=13% Similarity=0.090 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeec----c----cchhhHHHHHH
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS----R----CNERDIKTAWE 167 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~----r----~~~~dI~~a~e 167 (620)
+.++-.++.+...+.|++.+-+- |. .++... ..+. ++...++..+ + .....++.+++
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-----~~---~v~~~~--~~~~-----~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~ 103 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-----RG---IAEKYY--DGSV-----PLILKLNGKTTLYNGEPVSVANCSVEEAVS 103 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-----HH---HHHHHC--CSSS-----CEEEECEECCTTCCSSCCCEESSCHHHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-----HH---HHHHhh--cCCC-----cEEEEEeCCCCcCCCCccchHHHHHHHHHH
Confidence 67788899999999999999872 32 233322 1111 2222222211 1 01134555554
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCCCC----CCHHHHHHHHHHHHH
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAGR----SDRKFLYEILGEVIK 242 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~~r----~d~e~l~~~~~~~~~ 242 (620)
.|++.|.+.+-.. ..+.++.++.+.+.++.+++.|+. +...+ .++.. .+++.+...++.+.+
T Consensus 104 ----~Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~-vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 104 ----LGASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLP-LVVESFPRGGKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp ----TTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCC-EEEEECCCSTTCCCTTCHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCe-EEEEeeCCCCccccCCCHHHHHHHHHHHHH
Confidence 4888887765221 134578899999999999999986 43322 12111 167888888899999
Q ss_pred cCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCC--CcchHHHHHHHHHHhcCcEE
Q 007056 243 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN--DLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 243 aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN--D~GlAvANslaAv~aGA~~V 307 (620)
+|||.|-.. |.| .|+.+.++.+ ..+..+ +... =+=+ |.-.+.+|.-.++++||+.+
T Consensus 171 ~GAD~vkt~-~~~--~~e~~~~~~~----~~~~~p-V~as-GGi~~~~~~~~l~~i~~~~~aGA~Gv 228 (263)
T 1w8s_A 171 LGADAMKIK-YTG--DPKTFSWAVK----VAGKVP-VLMS-GGPKTKTEEDFLKQVEGVLEAGALGI 228 (263)
T ss_dssp HTCSEEEEE-CCS--SHHHHHHHHH----HTTTSC-EEEE-CCSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred cCCCEEEEc-CCC--CHHHHHHHHH----hCCCCe-EEEE-eCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 999998888 433 5665555543 332111 2221 1223 78889999999999999844
No 66
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=93.49 E-value=0.35 Score=49.23 Aligned_cols=205 Identities=12% Similarity=0.006 Sum_probs=104.7
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--------CCChh-----HHHHHHHHHHHhcccc
Q 007056 75 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------AASKE-----DFEAVRTIAKEVGNAV 141 (620)
Q Consensus 75 ~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP--------~~s~~-----d~e~v~~i~~~~~~~~ 141 (620)
.++=|.=-|+||-.+. +. .+.++.+.++|++.||+... ...|. +.+.++.+.+..+
T Consensus 21 ~~~g~~~~s~~~~~~~-----~l---~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~G--- 89 (305)
T 3obe_A 21 KKMGLQTYSLGQELLQ-----DM---PNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAG--- 89 (305)
T ss_dssp CCCEEEGGGGTHHHHT-----TH---HHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTT---
T ss_pred CceEEEEEEchhhhhc-----CH---HHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCC---
Confidence 3455666677763211 33 45566677889999999632 11233 5566666665432
Q ss_pred cccCCccceEEeeccc------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHH
Q 007056 142 DAESGYVPVICGLSRC------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKF 209 (620)
Q Consensus 142 ~~~~~l~~~i~~~~r~------------~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ 209 (620)
+... +..... ..+.++++++.....|.+.|.+.. ..+...+ ...+...+.+.++.++
T Consensus 90 -----L~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~----~~~~~~~~~l~~l~~~ 158 (305)
T 3obe_A 90 -----LRIS-SSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPS-LPRIENE----DDAKVVSEIFNRAGEI 158 (305)
T ss_dssp -----CEEE-EEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECC-CCCCSSH----HHHHHHHHHHHHHHHH
T ss_pred -----CeEE-EeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCC-CCCCCCH----HHHHHHHHHHHHHHHH
Confidence 2111 111111 123355566665666888887532 1110000 0134556777788888
Q ss_pred HHHcCCCEEEEcCCCC--CC------------------CCHHHHHHHHHHHHHcCCcEEeec-CCccccCHHHHHHHHHH
Q 007056 210 ARSLGCDDVEFSPEDA--GR------------------SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIAD 268 (620)
Q Consensus 210 a~~~G~~~V~f~~ed~--~r------------------~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~~~P~~v~~li~~ 268 (620)
|+++|+. +.+-+... .. ...+.+..+++ +.+.+.+.++ ||.=...-. .+....
T Consensus 159 a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~vg~~lD~~H~~~~g--~d~~~~ 232 (305)
T 3obe_A 159 TKKAGIL-WGYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLK---NTDPDKVMFELDVYWAVMGQ--QDPVEW 232 (305)
T ss_dssp HHTTTCE-EEEECCSGGGSEECCTTCCCC--------CCSEEHHHHHHH---HSCTTTEEEEEEHHHHHHTT--CCHHHH
T ss_pred HHHcCCE-EEEecCcccccccccccccccccccccccCCChHHHHHHHH---hCCcccEEEEEeHHHHHHcC--CCHHHH
Confidence 9999974 55522211 00 12233333333 3455544433 543111000 012333
Q ss_pred HHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 269 IKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 269 l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
+++ +.+ -...+|.+| -.-+|. .|+.+...++..|+..|+
T Consensus 233 i~~-~~~---ri~~vHlkD-----------------------~~~~G~-~G~id~~~i~~~L~~~gy 271 (305)
T 3obe_A 233 MEN-YPN---RFKLLHIKD-----------------------RWIIGD-SGMMNFPNIFKKAYEIGI 271 (305)
T ss_dssp HHH-STT---TEEEEEECC-----------------------SSSTTC-SSSBCHHHHHHHHHHHTC
T ss_pred HHH-hhC---ceeEEEecc-----------------------CcCCCC-CCccCHHHHHHHHHHcCC
Confidence 443 332 346899998 234451 489999999999998774
No 67
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.45 E-value=0.24 Score=50.30 Aligned_cols=169 Identities=18% Similarity=0.206 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh----------------------HHHHHHHHHHHhcccccccCCccceEEe
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKE----------------------DFEAVRTIAKEVGNAVDAESGYVPVICG 153 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~----------------------d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 153 (620)
+.+.-+++++.|.+. +|.||+|.|.+.|- -++.++++.+.. + .|.+ .
T Consensus 28 ~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~-~--------~Pii-~ 96 (271)
T 1ujp_A 28 SREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-E--------KPLF-L 96 (271)
T ss_dssp CHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-C--------SCEE-E
T ss_pred ChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-C--------CCEE-E
Confidence 345677899999999 99999999986551 134455555431 1 1322 2
Q ss_pred ecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Q 007056 154 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 230 (620)
Q Consensus 154 ~~r~~~---~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~ 230 (620)
++-.+. -+++..++.+..+|++.+-+... +. +.+.+.++.++++|++.+.+... -++.
T Consensus 97 m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl------------~~----ee~~~~~~~~~~~gl~~i~liap---~s~~ 157 (271)
T 1ujp_A 97 MTYLNPVLAWGPERFFGLFKQAGATGVILPDL------------PP----DEDPGLVRLAQEIGLETVFLLAP---TSTD 157 (271)
T ss_dssp ECCHHHHHHHCHHHHHHHHHHHTCCEEECTTC------------CG----GGCHHHHHHHHHHTCEEECEECT---TCCH
T ss_pred EecCcHHHHhhHHHHHHHHHHcCCCEEEecCC------------CH----HHHHHHHHHHHHcCCceEEEeCC---CCCH
Confidence 332221 13455555556668886544221 11 34556778888999753333221 2455
Q ss_pred HHHHHHHHHHHHcCCcEEeec---CCccccCH--HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCc
Q 007056 231 KFLYEILGEVIKVGATTLNIP---DTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~---DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 305 (620)
+.+..+++. +..-+++. =++|..+. ....++++.+++.. +. .+.+++-.|+ -.++. .+ +||+
T Consensus 158 eri~~ia~~----~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~-Pv~vGfGI~t-----~e~a~-~~-~~AD 224 (271)
T 1ujp_A 158 ARIATVVRH----ATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-AL-PVAVGFGVSG-----KATAA-QA-AVAD 224 (271)
T ss_dssp HHHHHHHTT----CCSCEEEECC------------CCHHHHHHHHTTC-CS-CEEEESCCCS-----HHHHH-HH-TTSS
T ss_pred HHHHHHHHh----CCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CC-CEEEEcCCCC-----HHHHH-Hh-cCCC
Confidence 555444433 32233222 24454432 33467888898865 22 2556644443 23333 35 8887
Q ss_pred EE
Q 007056 306 QV 307 (620)
Q Consensus 306 ~V 307 (620)
.|
T Consensus 225 gV 226 (271)
T 1ujp_A 225 GV 226 (271)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 68
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=93.35 E-value=0.13 Score=50.94 Aligned_cols=199 Identities=14% Similarity=0.069 Sum_probs=104.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCC----ChhHHHHHHHHHHHhcccccccCCcc-ceEEe---eccc------chh
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYV-PVICG---LSRC------NER 160 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~-~~i~~---~~r~------~~~ 160 (620)
++.++.+ +.+.++|++.||+..+.. .+.+.+.++++.+.. ++. ..+.. |... ..+
T Consensus 16 ~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (281)
T 3u0h_A 16 TSLVLYL---DLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRR--------GLVLANLGLPLNLYDSEPVFLRELS 84 (281)
T ss_dssp CCHHHHH---HHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTT--------TCEECCEECCSCTTSCHHHHHHHHH
T ss_pred CCHHHHH---HHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHc--------CCceEEecccccccCCCHHHHHHHH
Confidence 5666554 556678999999975421 122344555554432 221 11111 1110 012
Q ss_pred hHHHHHHHHhcCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC---------CCCCCH
Q 007056 161 DIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---------AGRSDR 230 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed---------~~r~d~ 230 (620)
.++++++.....|.+.|.+.. +.++...+ ...+...+.+.+++++|++.|+. +.+-+.. ..-.++
T Consensus 85 ~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~~~~ 159 (281)
T 3u0h_A 85 LLPDRARLCARLGARSVTAFLWPSMDEEPV----RYISQLARRIRQVAVELLPLGMR-VGLEYVGPHHLRHRRYPFVQSL 159 (281)
T ss_dssp THHHHHHHHHHTTCCEEEEECCSEESSCHH----HHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCGGGCCSSEECCCSH
T ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCcch----hhHHHHHHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCCH
Confidence 334456666667888887532 21110000 12345667777888889999984 6553322 123467
Q ss_pred HHHHHHHHHHHHcCCcEEeec-CCccc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCc
Q 007056 231 KFLYEILGEVIKVGATTLNIP-DTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~-DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 305 (620)
+.+.++++.+ +...+.++ ||.=. ..|.+ + + +.+. +-...+|++|..+.. .+.
T Consensus 160 ~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~~~~~---~---~-~~~~---~~i~~vHl~D~~~~~---------~~~- 216 (281)
T 3u0h_A 160 ADLKTFWEAI---GAPNVGALVDSYHWYTAGEHEDD---L---A-QLPP---EKVVYVHINDTRDAP---------EDA- 216 (281)
T ss_dssp HHHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHH---H---H-TSCG---GGEEEEEECBCSSCT---------TTC-
T ss_pred HHHHHHHHHc---CCCCeeEEeehhHHHHcCCCHHH---H---H-hcCc---ccEEEEEecCCCCCc---------ccc-
Confidence 7777777654 43333333 44221 12322 2 2 2232 245689999987632 010
Q ss_pred EEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 306 QVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 306 ~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.+..-.-+|+ |..+...++..|+..|+
T Consensus 217 -~~~~~~~~G~--G~id~~~~~~~L~~~gy 243 (281)
T 3u0h_A 217 -HDGKRLLPGD--GRIPLVPFLRGLYLAGY 243 (281)
T ss_dssp -CTTSCBCTTS--SSSCHHHHHHHHHHHTC
T ss_pred -hhccCcCCCC--cCcCHHHHHHHHHHcCC
Confidence 0011122454 89999999999998664
No 69
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.32 E-value=1.2 Score=47.32 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecC-CccccCHHHHHHH--HHHHHHhCCCCCceeE
Q 007056 205 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD-TVGITMPTEFGKL--IADIKANTPGIENVVI 281 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~D-TvG~~~P~~v~~l--i~~l~~~~~~~~~v~i 281 (620)
++++++.+.|.. |..+- +.++.+.+...++.+.+.|...|.||- |.++-+|.+..+| |..+++.+|+ ++|
T Consensus 149 pLL~~va~~gKP-ViLSt---GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~---lpV 221 (385)
T 1vli_A 149 PLLKYVARLNRP-MIFST---AGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE---AVI 221 (385)
T ss_dssp HHHHHHHTTCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT---SEE
T ss_pred HHHHHHHhcCCe-EEEEC---CCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCC---CCE
Confidence 345666667875 77754 345888888889988888986666642 5556556555544 7888988863 567
Q ss_pred EEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 282 STHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 282 ~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
++=-|- .|- .+-+++|+.+||+.|+.=+
T Consensus 222 G~SdHt-~G~-~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 222 GFSDHS-EHP-TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp EEEECC-SSS-SHHHHHHHHTTCSEEEEEB
T ss_pred EeCCCC-CCc-hHHHHHHHHcCCCEEEeCC
Confidence 775554 232 7788999999999986544
No 70
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=93.20 E-value=4.7 Score=39.48 Aligned_cols=187 Identities=13% Similarity=0.041 Sum_probs=111.5
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc--cchh-hHHHHHHH
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--CNER-DIKTAWEA 168 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~~~~-dI~~a~ea 168 (620)
+...+.++..++.+...+.|++.+-+ +|. +++...+.+... + ..+..+.+|-. ...+ -+..+-++
T Consensus 13 ~p~~t~~~i~~l~~~a~~~~~~aVcv-~p~-------~v~~~~~~l~~~---~-v~v~~vigFP~G~~~~~~k~~e~~~A 80 (220)
T 1ub3_A 13 KPTATLEEVAKAAEEALEYGFYGLCI-PPS-------YVAWVRARYPHA---P-FRLVTVVGFPLGYQEKEVKALEAALA 80 (220)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEC-CGG-------GHHHHHHHCTTC---S-SEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEE-CHH-------HHHHHHHHhCCC---C-ceEEEEecCCCCCCchHHHHHHHHHH
Confidence 34568999999999999999999887 453 344433333221 0 01122223311 1111 11222233
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 007056 169 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 248 (620)
Q Consensus 169 l~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I 248 (620)
++ .|++.|.+++....+ .....+++++.+...++.+.+.+++ |.+ |.. ..+++.+...++.+.++|||.|
T Consensus 81 i~-~GAdevd~vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lk-vIl--et~-~l~~e~i~~a~~ia~eaGADfV 150 (220)
T 1ub3_A 81 CA-RGADEVDMVLHLGRA-----KAGDLDYLEAEVRAVREAVPQAVLK-VIL--ETG-YFSPEEIARLAEAAIRGGADFL 150 (220)
T ss_dssp HH-TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHSTTSEEE-EEC--CGG-GSCHHHHHHHHHHHHHHTCSEE
T ss_pred HH-cCCCEEEecccchhh-----hCCCHHHHHHHHHHHHHHHcCCCce-EEE--ecC-CCCHHHHHHHHHHHHHhCCCEE
Confidence 33 499999888764321 1235677888888888877655443 444 222 2457889999999999999998
Q ss_pred eecC--CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 249 NIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 249 ~L~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
--.- +.|.++|+.+..+-+.+...+ .+.++==.+ + ...+++-+++||++|=+
T Consensus 151 KTsTGf~~~gat~~dv~~m~~~vg~~v----~VkaaGGir-t----~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 151 KTSTGFGPRGASLEDVALLVRVAQGRA----QVKAAGGIR-D----RETALRMLKAGASRLGT 204 (220)
T ss_dssp ECCCSSSSCCCCHHHHHHHHHHHTTSS----EEEEESSCC-S----HHHHHHHHHTTCSEEEE
T ss_pred EeCCCCCCCCCCHHHHHHHHHhhCCCC----eEEEECCCC-C----HHHHHHHHHCCCcccch
Confidence 7652 246789988877665542222 133332123 2 25677777899997633
No 71
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=92.93 E-value=5 Score=41.64 Aligned_cols=162 Identities=13% Similarity=0.109 Sum_probs=98.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCC----ChhH-HHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWE 167 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~e 167 (620)
..+.+.-..+++.-.+++-+.|=-.+|.. +... ...++..++.. . -+|...=+--+ ..+.+..+++
T Consensus 25 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~-~-------~VPValHlDHg~~~e~i~~ai~ 96 (323)
T 2isw_A 25 VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKH-P-------DIPICIHLDHGDTLESVKMAID 96 (323)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHC-T-------TSCEEEEEEEECSHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhc-C-------CCcEEEECCCCCCHHHHHHHHH
Confidence 45789999999999999999774444432 1111 12333333320 0 13444433333 3456666665
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE--E----cCCC-----CCCCCHHHHHHH
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--F----SPED-----AGRSDRKFLYEI 236 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~--f----~~ed-----~~r~d~e~l~~~ 236 (620)
+ |...|.+=.| ..+.||+++..++.+++|+..|+. |+ . +-|| ...|+|+.+.++
T Consensus 97 ~----GFtSVMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~v~~~~~yTdPeea~~F 161 (323)
T 2isw_A 97 L----GFSSVMIDAS----------HHPFDENVRITKEVVAYAHARSVS-VEAELGTLGGIEEDVQNTVQLTEPQDAKKF 161 (323)
T ss_dssp T----TCSEEEECCT----------TSCHHHHHHHHHHHHHHHHTTTCE-EEEEESCC----------CCCCCHHHHHHH
T ss_pred c----CCCeEEecCC----------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeCCccCCccCcccccccCCHHHHHHH
Confidence 4 8888754332 247899999999999999999974 53 2 2232 346999988888
Q ss_pred HHHHHHcCCcEEeec--CCccccC----HH--HHHHHHHHHHHhCCCCCceeEEEec
Q 007056 237 LGEVIKVGATTLNIP--DTVGITM----PT--EFGKLIADIKANTPGIENVVISTHC 285 (620)
Q Consensus 237 ~~~~~~aGa~~I~L~--DTvG~~~----P~--~v~~li~~l~~~~~~~~~v~i~~H~ 285 (620)
+++ .|+|.+-++ -.=|.-. |. ==.++++.+++.++ +||-+|+
T Consensus 162 v~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~----vpLVlHG 211 (323)
T 2isw_A 162 VEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG----IPLVMHG 211 (323)
T ss_dssp HHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC----SCEEECS
T ss_pred HHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC----CCeEEEC
Confidence 774 588865544 3334332 33 11257777887763 7899998
No 72
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=92.88 E-value=2 Score=42.31 Aligned_cols=163 Identities=20% Similarity=0.161 Sum_probs=111.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcc----cccccCCc--------cceEEeecccc---
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGN----AVDAESGY--------VPVICGLSRCN--- 158 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~----~~~~~~~l--------~~~i~~~~r~~--- 158 (620)
+-|.|+-++-.+...+...+.+-+|--+-.|..|..+-.|+.+... .+....++ -..+-+|.+..
T Consensus 47 y~tve~av~~mk~y~~~~~~avSVGLGaGDp~Q~~~Va~Ia~~~~P~HVNQvFtgag~t~~~L~~~~T~VNaLvsPTG~~ 126 (249)
T 3m0z_A 47 YPDVASAVVDMRDYAKLIDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNETVVNGLVSPTGTP 126 (249)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCEEEECSSSCGGGHHHHHHHHHHHCCSEECCBGGGHHHHHHHHTSSCSEEEEEEBCCSST
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHHhccCCCeEEEEEEcCCCcc
Confidence 4568888999999999888889999877788899999888875421 11100000 01122222210
Q ss_pred -----------------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 159 -----------------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 159 -----------------~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
.-.++.|+..+++.|.+.|.+|-=- | ...++.+..+++.|.++|+ .+-
T Consensus 127 G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~---------G---l~~l~E~~avAka~a~~g~---~lE 191 (249)
T 3m0z_A 127 GMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMG---------G---LKHRAEFEAVAKACAAHDF---WLE 191 (249)
T ss_dssp TEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCT---------T---TTTHHHHHHHHHHHHHTTC---EEE
T ss_pred ceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecC---------C---cccHHHHHHHHHHHHHcCc---eEC
Confidence 1247889999999999999887311 1 1224445566666667886 233
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEe-------ecCCccccCHHHHHHHHHHHHHhC
Q 007056 222 PEDAGRSDRKFLYEILGEVIKVGATTLN-------IPDTVGITMPTEFGKLIADIKANT 273 (620)
Q Consensus 222 ~ed~~r~d~e~l~~~~~~~~~aGa~~I~-------L~DTvG~~~P~~v~~li~~l~~~~ 273 (620)
| .+..|.+.+.++++.+.++|+..|. |=-..|...|+++.+++..+++-+
T Consensus 192 P--TGGIdl~N~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 192 P--TGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp E--BSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred C--CCCccHhhHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 4 6678888999999999999986431 224689999999999999998754
No 73
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.87 E-value=0.59 Score=49.71 Aligned_cols=139 Identities=14% Similarity=0.222 Sum_probs=90.3
Q ss_pred HHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEE--e
Q 007056 104 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTF--I 181 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~--~ 181 (620)
++.|.++|++.+-+|+. .-+++..++.+++. + .|.|..-+.+..++|+.|++.+...|.+.|.+. +
T Consensus 127 vd~l~~~~vd~~KIgS~--~~~N~pLL~~va~~-g---------KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~ 194 (385)
T 1vli_A 127 ADLLQSTSPSAFKIASY--EINHLPLLKYVARL-N---------RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCV 194 (385)
T ss_dssp HHHHHTTCCSCEEECGG--GTTCHHHHHHHHTT-C---------SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEEC
T ss_pred HHHHHhcCCCEEEECcc--cccCHHHHHHHHhc-C---------CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEecc
Confidence 34455566666666543 23457778877763 1 267888888899999999999988887655553 2
Q ss_pred cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe--------e-
Q 007056 182 ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN--------I- 250 (620)
Q Consensus 182 ~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~--------L- 250 (620)
++.+.- ...++. .++..+++. ++. |-|+-=..++ ..+..+++.+||+.|- +
T Consensus 195 s~YPtp-~~~~nL----------~aI~~Lk~~f~~lp-VG~SdHt~G~------~~~~~AAvAlGA~iIEkHftldra~~ 256 (385)
T 1vli_A 195 AKYPAP-PEYSNL----------SVIPMLAAAFPEAV-IGFSDHSEHP------TEAPCAAVRLGAKLIEKHFTIDKNLP 256 (385)
T ss_dssp SSSSCC-GGGCCT----------THHHHHHHHSTTSE-EEEEECCSSS------SHHHHHHHHTTCSEEEEEBCSCTTSS
T ss_pred CCCCCC-hhhcCH----------HHHHHHHHHcCCCC-EEeCCCCCCc------hHHHHHHHHcCCCEEEeCCCccccCC
Confidence 322210 111222 234455544 464 7663212223 5678888999998663 4
Q ss_pred -cCCccccCHHHHHHHHHHHHHh
Q 007056 251 -PDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 251 -~DTvG~~~P~~v~~li~~l~~~ 272 (620)
+|-.=.++|+++.++++.++.-
T Consensus 257 G~D~~~SL~P~ef~~lv~~ir~i 279 (385)
T 1vli_A 257 GADHSFALNPDELKEMVDGIRKT 279 (385)
T ss_dssp CSSCTTSBCHHHHHHHHHHHHHH
T ss_pred CCchhhhCCHHHHHHHHHHHHHH
Confidence 7888899999999999999863
No 74
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.78 E-value=1.3 Score=43.15 Aligned_cols=155 Identities=20% Similarity=0.140 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
.+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..+.. ..-.+. -...++++.++++ |.
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~vgagt-vi~~d~~~~A~~a----GA 89 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR--TECAVDAIRAIAKEVPEA--------IVGAGT-VLNPQQLAEVTEA----GA 89 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC--STTHHHHHHHHHHHCTTS--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--ChhHHHHHHHHHHHCcCC--------EEeeCE-EEEHHHHHHHHHc----CC
Confidence 35566789999999999999999974 455567888888764321 111221 2345777888776 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee-c-C
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI-P-D 252 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L-~-D 252 (620)
+-||. +..+ .+.++.++.+|.. +..++ .+++.+ ..+.++|+|.|.+ | .
T Consensus 90 d~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~Fpa~ 139 (214)
T 1wbh_A 90 QFAIS--PGLT------------------EPLLKAATEGTIP-LIPGI-----STVSEL----MLGMDYGLKEFKFFPAE 139 (214)
T ss_dssp SCEEE--SSCC------------------HHHHHHHHHSSSC-EEEEE-----SSHHHH----HHHHHTTCCEEEETTTT
T ss_pred CEEEc--CCCC------------------HHHHHHHHHhCCC-EEEec-----CCHHHH----HHHHHCCCCEEEEecCc
Confidence 88874 3222 2567888889875 33332 234433 3456799998876 2 1
Q ss_pred CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh-cCcEE
Q 007056 253 TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 307 (620)
Q Consensus 253 TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a-GA~~V 307 (620)
..| =-+.++.++..+|+ +++-. .-|.-..|.-.-+.+ |+..|
T Consensus 140 ~~g------G~~~lk~i~~~~~~---ipvva----iGGI~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 140 ANG------GVKALQAIAGPFSQ---VRFCP----TGGISPANYRDYLALKSVLCI 182 (214)
T ss_dssp TTT------HHHHHHHHHTTCTT---CEEEE----BSSCCTTTHHHHHTSTTBSCE
T ss_pred ccc------CHHHHHHHhhhCCC---CeEEE----ECCCCHHHHHHHHhcCCCeEE
Confidence 111 03577788877764 44422 134445577777787 65444
No 75
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.58 E-value=9.4 Score=38.33 Aligned_cols=197 Identities=15% Similarity=0.067 Sum_probs=115.9
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc
Q 007056 77 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR 156 (620)
Q Consensus 77 V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r 156 (620)
...+|-||= +...|.++..++.+...+.|+..+-+ +|. +++...+.+... . ..+..+.+|--
T Consensus 44 a~~IDhTlL------~p~~t~~~I~~lc~eA~~~~~aaVCV-~p~-------~V~~a~~~L~gs---~-v~v~tVigFP~ 105 (260)
T 3r12_A 44 KSAIEHTNL------KPFATPDDIKKLCLEARENRFHGVCV-NPC-------YVKLAREELEGT---D-VKVVTVVGFPL 105 (260)
T ss_dssp HHHEEEEEC------CTTCCHHHHHHHHHHHHHTTCSEEEE-CGG-------GHHHHHHHHTTS---C-CEEEEEESTTT
T ss_pred HHhcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE-CHH-------HHHHHHHHhcCC---C-CeEEEEecCCC
Confidence 346787772 33578999999999999999999988 564 344444433221 0 01122223321
Q ss_pred cc-hhh--HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHH
Q 007056 157 CN-ERD--IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 233 (620)
Q Consensus 157 ~~-~~d--I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l 233 (620)
.. ... +..+-+++. .|++.|.+++....+ .....+++.+.+...++.+. |. .+-+-.|.. ..+.+.+
T Consensus 106 G~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~--~~-~lKVIlEt~-~Lt~eei 175 (260)
T 3r12_A 106 GANETRTKAHEAIFAVE-SGADEIDMVINVGML-----KAKEWEYVYEDIRSVVESVK--GK-VVKVIIETC-YLDTEEK 175 (260)
T ss_dssp CCSCHHHHHHHHHHHHH-HTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTT--TS-EEEEECCGG-GCCHHHH
T ss_pred CCCcHHHHHHHHHHHHH-cCCCEEEEEeehhhh-----ccccHHHHHHHHHHHHHhcC--CC-cEEEEEeCC-CCCHHHH
Confidence 11 111 222233333 399999998775422 23456777788877777654 33 233333322 4566889
Q ss_pred HHHHHHHHHcCCcEEeecC--CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 234 YEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
...++.+.++|||-|--.- ..|.++++.+.-+-+.+...+ .+..+==.+ + ...+++-+++||++|=+|
T Consensus 176 ~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~~v----~VKaAGGIr-t----~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEM----GVKASGGIR-T----FEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHCTTS----EEEEESSCC-S----HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCCCc----eEEEeCCCC-C----HHHHHHHHHcCCceeecc
Confidence 9999999999999988762 124678887665544432222 123321112 2 267777899999987443
No 76
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=92.51 E-value=0.7 Score=44.81 Aligned_cols=151 Identities=16% Similarity=0.160 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCE
Q 007056 97 SKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 176 (620)
Q Consensus 97 ~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~ 176 (620)
.++-+++++.|.+.|++.||+.+- ++...+.++.+.+ +.. ..-.+. -...++++.++++ |.+-
T Consensus 24 ~~~~~~~~~~l~~gGv~~iel~~k--~~~~~~~i~~~~~--~~~--------~~gag~-vl~~d~~~~A~~~----GAd~ 86 (207)
T 2yw3_A 24 GEDLLGLARVLEEEGVGALEITLR--TEKGLEALKALRK--SGL--------LLGAGT-VRSPKEAEAALEA----GAAF 86 (207)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEECS--STHHHHHHHHHTT--SSC--------EEEEES-CCSHHHHHHHHHH----TCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC--ChHHHHHHHHHhC--CCC--------EEEeCe-EeeHHHHHHHHHc----CCCE
Confidence 345678999999999999999863 4455566766655 221 111122 2245677777776 8888
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccc
Q 007056 177 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI 256 (620)
Q Consensus 177 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~ 256 (620)
||. +..+ .+.++.++..|.. +..++ .+++.+ ..+.+.|+|.|.+-
T Consensus 87 v~~--~~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~f----- 131 (207)
T 2yw3_A 87 LVS--PGLL------------------EEVAALAQARGVP-YLPGV-----LTPTEV----ERALALGLSALKFF----- 131 (207)
T ss_dssp EEE--SSCC------------------HHHHHHHHHHTCC-EEEEE-----CSHHHH----HHHHHTTCCEEEET-----
T ss_pred EEc--CCCC------------------HHHHHHHHHhCCC-EEecC-----CCHHHH----HHHHHCCCCEEEEe-----
Confidence 874 2221 2556777888875 33332 234443 34557899988771
Q ss_pred cCHHHH---HHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEe
Q 007056 257 TMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 257 ~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 308 (620)
|.+. .+.++.++..+|+ +++-.= -|....|.-..+.+||+.|-
T Consensus 132 --pa~~~gG~~~lk~l~~~~~~---ipvvai----GGI~~~n~~~~l~aGa~~va 177 (207)
T 2yw3_A 132 --PAEPFQGVRVLRAYAEVFPE---VRFLPT----GGIKEEHLPHYAALPNLLAV 177 (207)
T ss_dssp --TTTTTTHHHHHHHHHHHCTT---CEEEEB----SSCCGGGHHHHHTCSSBSCE
T ss_pred --cCccccCHHHHHHHHhhCCC---CcEEEe----CCCCHHHHHHHHhCCCcEEE
Confidence 2111 2567788887764 455322 34445688889999998753
No 77
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=92.45 E-value=2.6 Score=42.34 Aligned_cols=206 Identities=18% Similarity=0.161 Sum_probs=107.3
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--C-CChhHHHHHHHHHHHhcccccccCCccceEE
Q 007056 76 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--A-ASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 152 (620)
Q Consensus 76 ~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP--~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~ 152 (620)
++=+.-.++++.. ...+.++ ++.+.++|++.||+..+ . ..+.+.+.++.+.+..+ +.....
T Consensus 22 klg~~~~~~~~~~----~~~~l~~----l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~g--------l~i~~~ 85 (309)
T 2hk0_A 22 KHGIYYSYWEHEW----SAKFGPY----IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNG--------IILTAG 85 (309)
T ss_dssp EEEEEGGGGCSCT----TSCSHHH----HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTT--------CEEEEE
T ss_pred eeEEehhhccccc----ccccHHH----HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcC--------CeEEEe
Confidence 4556666666421 1245555 45556789999999753 1 11245566666655432 211111
Q ss_pred e-------ecccc-------hhhHHHHHHHHhcCCCCEEEEEec--CCHHHHHHHhCC-CH----HHHHHHHHHHHHHHH
Q 007056 153 G-------LSRCN-------ERDIKTAWEAVKYAKRPRIHTFIA--TSGIHMEHKLRK-TK----QQVVEIARSMVKFAR 211 (620)
Q Consensus 153 ~-------~~r~~-------~~dI~~a~eal~~ag~~~v~i~~~--~Sd~h~~~~l~~-t~----ee~l~~~~~~v~~a~ 211 (620)
. ++... .+.++++++.....|.+.|..+.. .... .-.. +. +...+.+.++.++|+
T Consensus 86 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~----~~~~~~~~~~~~~~~~~l~~l~~~a~ 161 (309)
T 2hk0_A 86 IGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPID----YSQPVDKAGDYARGVEGINGIADFAN 161 (309)
T ss_dssp CCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCC----TTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeecccccccc----CCCcCChHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 134555666666779888764320 0000 0011 33 345566667778888
Q ss_pred HcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHcCCcEEee-cCCccccCH-HHHHHHHHHHHHhCCCCCceeEEEec
Q 007056 212 SLGCDDVEFSPE----DAGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMP-TEFGKLIADIKANTPGIENVVISTHC 285 (620)
Q Consensus 212 ~~G~~~V~f~~e----d~~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~ 285 (620)
+.|+. +.+-+. ...-.+++.+.++++.+ +...+.+ .||.=...- ....+.++.+.. -...+|.
T Consensus 162 ~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~-------~i~~vHl 230 (309)
T 2hk0_A 162 DLGIN-LCIEVLNRFENHVLNTAAEGVAFVKDV---GKNNVKVMLDTFHMNIEEDSFGDAIRTAGP-------LLGHFHT 230 (309)
T ss_dssp HTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEE
T ss_pred HcCCE-EEEeecccccccccCCHHHHHHHHHHc---CCCCeEEEEehhhHhhcCcCHHHHHHHHHh-------hEEEEEe
Confidence 89974 555332 22234677777777654 3333333 355211100 012223333322 3468999
Q ss_pred CCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 286 QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 286 HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
||.. + .-+|+ |..+...++..|+..++
T Consensus 231 ~D~~---------------r------~~~G~--G~id~~~~~~~L~~~gy 257 (309)
T 2hk0_A 231 GESN---------------R------RVPGK--GRMPWHEIGLALRDINY 257 (309)
T ss_dssp CCTT---------------S------CCTTS--SCCCHHHHHHHHHHTTC
T ss_pred CCCC---------------C------CCCcC--CccCHHHHHHHHHHcCC
Confidence 9862 1 12344 88999999999998653
No 78
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.35 E-value=3.1 Score=42.55 Aligned_cols=191 Identities=18% Similarity=0.144 Sum_probs=117.7
Q ss_pred cCCCCCC--CCCHHHHHHHHHHHhHcCCCEEEEecCCC-----ChhH-HHHHHHHHHHhcccccccCCccceEEeeccc-
Q 007056 87 GEQSPGA--TLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC- 157 (620)
Q Consensus 87 G~Qs~g~--~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~-----s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~- 157 (620)
+.++-+. ..+.+.-..+++.-.+++-+.|=-.+|.. .... ...++.+++...- -+|...=+--+
T Consensus 19 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~-------~VPValHlDHg~ 91 (288)
T 3q94_A 19 GKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI-------TVPVAIHLDHGS 91 (288)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC-------CSCEEEEEEEEC
T ss_pred CCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC-------CCcEEEECCCCC
Confidence 4444432 46789999999999999999764434422 1111 1334445542111 13544444333
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCC------
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDA------ 225 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~------ 225 (620)
..+.+..++++ |...|.+=.|. .+.||+++..++.+++|+..|+. |+- +-||.
T Consensus 92 ~~e~i~~ai~~----GFtSVMiDgS~----------~p~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgG~Ed~~~~~~~ 156 (288)
T 3q94_A 92 SFEKCKEAIDA----GFTSVMIDASH----------HPFEENVETTKKVVEYAHARNVS-VEAELGTVGGQEDDVIAEGV 156 (288)
T ss_dssp SHHHHHHHHHH----TCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCE-EEEEESBCBCSCSSCGGGGC
T ss_pred CHHHHHHHHHc----CCCeEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcCCccc
Confidence 45667777665 88887542321 47799999999999999999974 542 23332
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeec--CCcccc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIP--DTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~--DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
..|+|+.+.++++ +.|+|.+-++ -.=|.- .|.-=.++++.+++.++ +||-+|+= .|....+-..|+.
T Consensus 157 ~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~----vpLVlHGg--SG~~~e~i~~ai~ 227 (288)
T 3q94_A 157 IYADPAECKHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG----VPLVLHGG--TGIPTADIEKAIS 227 (288)
T ss_dssp BCCCHHHHHHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC----SCEEECCC--TTCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC----CCEEEeCC--CCCCHHHHHHHHH
Confidence 4799998888765 4688865543 111221 12222356666777664 67887765 4666677777777
Q ss_pred hcCcEEe
Q 007056 302 AGARQVE 308 (620)
Q Consensus 302 aGA~~Vd 308 (620)
.|+.-|+
T Consensus 228 ~Gv~KiN 234 (288)
T 3q94_A 228 LGTSKIN 234 (288)
T ss_dssp TTEEEEE
T ss_pred cCCeEEE
Confidence 7776653
No 79
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.30 E-value=9.8 Score=38.58 Aligned_cols=149 Identities=15% Similarity=0.195 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 164 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 164 (620)
..++.+..++.++.+.+.|-|+|.+|. |.+. ++|++.+..+.+.+... +. | |+. --.+.+-++.
T Consensus 24 ~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-----~~-p-iSI-DT~~~~va~a 95 (280)
T 1eye_A 24 CYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-----GI-T-VSI-DTMRADVARA 95 (280)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-----TC-C-EEE-ECSCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-----CC-E-EEE-eCCCHHHHHH
Confidence 347899999999999999999999996 4322 23444443333332110 11 1 222 2235666777
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-----CCCC-----CC-----
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-----DAGR-----SD----- 229 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-----d~~r-----~d----- 229 (620)
|+++ |.+.|+ .+|-. +.. .++++.++++|+. +...+. +... .+
T Consensus 96 Al~a----Ga~iIN---dvsg~------~~d--------~~m~~~~a~~~~~-vVlmh~~G~p~tm~~~~~~y~dv~~~v 153 (280)
T 1eye_A 96 ALQN----GAQMVN---DVSGG------RAD--------PAMGPLLAEADVP-WVLMHWRAVSADTPHVPVRYGNVVAEV 153 (280)
T ss_dssp HHHT----TCCEEE---ETTTT------SSC--------TTHHHHHHHHTCC-EEEECCCCSCTTCTTSCCCCSSHHHHH
T ss_pred HHHc----CCCEEE---ECCCC------CCC--------HHHHHHHHHhCCe-EEEEcCCCCCcchhhcCcchhHHHHHH
Confidence 7665 777664 33320 111 1456667778886 444222 1111 12
Q ss_pred HHHHHHHHHHHHHcCCc--EEeecCCcccc-CHHHHHHHHHHHHH
Q 007056 230 RKFLYEILGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIKA 271 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~--~I~L~DTvG~~-~P~~v~~li~~l~~ 271 (620)
.+++.+.++.+.++|+. .|.|==-+|.. +.++-.++++.+.+
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~ 198 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPE 198 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHH
Confidence 67888999999999986 34332223332 45555566655543
No 80
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=92.08 E-value=12 Score=38.22 Aligned_cols=193 Identities=14% Similarity=0.174 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 101 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-------KRVPVIAGTGSNNTHASIDLTK 101 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCceEEeCCCCCCHHHHHHHHH
Confidence 478888899999999999999876 4 455566665 44455555432 2357888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+-+.++.++-..+..+ ..++.-+-|+... +...+++.+.+++ +.
T Consensus 102 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 165 (301)
T 1xky_A 102 K-ATEVGVDAVMLVAPYY-------NKPSQEGMYQHFKAIAE---STPLPVMLYNVPGRSIVQISVDTVVRLS----EI- 165 (301)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHH----TS-
T ss_pred H-HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----cC-
Confidence 3 3567999887776632 23466666665554433 3345545665432 3345777776664 22
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++ ..++ +..+ +-+.+++ .+.++..|++.+ +.| .+|..-+
T Consensus 166 pnIvgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 223 (301)
T 1xky_A 166 ENIVAIKDAGGD--VLTMTEIIE----KTAD--DFAV-YSGDDGL------TLPAMAVGAKGI---VSV----ASHVIGN 223 (301)
T ss_dssp TTEEEEEECSSC--HHHHHHHHH----HSCT--TCEE-EESSGGG------HHHHHHTTCCEE---EES----THHHHHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHH----hcCC--CeEE-EECcHHH------HHHHHHcCCCEE---EcC----HHHhCHH
Confidence 579999999984 344554443 3442 2223 3344432 556778898643 444 4566666
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 224 ~~~~l~~ 230 (301)
T 1xky_A 224 EMQEMIA 230 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 81
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=92.02 E-value=3 Score=42.82 Aligned_cols=137 Identities=17% Similarity=0.121 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEe--cCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHh
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAG--FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 170 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvG--fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 170 (620)
..++.++..++++.+.+.|++.|-+. -|-..++=.+.++.+.+. + +. ..+...+... .+...++.++
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~-~-------~~-~~i~i~TNG~--ll~~~~~~L~ 116 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQI-D-------GI-EDIGLTTNGL--LLKKHGQKLY 116 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTC-T-------TC-CEEEEEECST--THHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhC-C-------CC-CeEEEEeCcc--chHHHHHHHH
Confidence 45899999999999999999988773 354444322344433321 0 11 1232223222 2333456667
Q ss_pred cCCCCEEEEEecCC-H-HHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHcCCc
Q 007056 171 YAKRPRIHTFIATS-G-IHMEHKLRK-TKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 171 ~ag~~~v~i~~~~S-d-~h~~~~l~~-t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r-~d~e~l~~~~~~~~~aGa~ 246 (620)
.+|.+.|.+.+-+. + .|....-+. + ++.+.+.++.+++.|+ .|.+... ..+ .+.+.+.++++.+.+.|++
T Consensus 117 ~~g~~~v~iSld~~~~~~~~~i~~~~~~----~~~v~~~i~~l~~~g~-~v~i~~v-v~~g~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 117 DAGLRRINVSLDAIDDTLFQSINNRNIK----ATTILEQIDYATSIGL-NVKVNVV-IQKGINDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp HHTCCEEEEECCCSSHHHHHHHHSSCCC----HHHHHHHHHHHHHTTC-EEEEEEE-ECTTTTGGGHHHHHHHHHHTTCC
T ss_pred HCCCCEEEEecCCCCHHHHHHhhCCCCC----HHHHHHHHHHHHHCCC-CEEEEEE-EeCCCCHHHHHHHHHHHHhcCCe
Confidence 77999999876653 3 333222122 3 4556677888888997 3544332 122 2556788889999999987
No 82
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.90 E-value=10 Score=38.33 Aligned_cols=194 Identities=13% Similarity=0.136 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la- 89 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-------KRIPIIAGTGANSTREAIELT- 89 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHH-
Confidence 478888899999999999998876 3 344455665 34455555432 2357888887655444 4443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+.. .+...+++.+.+++ +.
T Consensus 90 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 154 (291)
T 3tak_A 90 KAAKDLGADAALLVTPYY-------NKPTQEGLYQHYKAIAEA---VELPLILYNVPGRTGVDLSNDTAVRLA----EI- 154 (291)
T ss_dssp HHHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSCCCCHHHHHHHT----TS-
T ss_pred HHHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCCHHHHHHHH----cC-
Confidence 333456999887766632 244666666555444433 35554566543 24455677665554 33
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++.... +..+ +-+++ ...+.++..|++.+ +.| .+|..-+
T Consensus 155 pnivgiK~ssgd--~~~~~~~~~~~~~------~f~v-~~G~d------~~~~~~l~~G~~G~---is~----~~n~~P~ 212 (291)
T 3tak_A 155 PNIVGIKDATGD--VPRGKALIDALNG------KMAV-YSGDD------ETAWELMLLGADGN---ISV----TANIAPK 212 (291)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHHTT------SSEE-EECCH------HHHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHHcCC------CeEE-EECcH------HHHHHHHHCCCCEE---Eec----hhhhcHH
Confidence 478999999873 4566666654332 2222 22332 23567888998644 443 5677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 213 ~~~~l~~a 220 (291)
T 3tak_A 213 AMSEVCAV 220 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 83
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.89 E-value=2 Score=43.87 Aligned_cols=149 Identities=14% Similarity=0.119 Sum_probs=92.9
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE--EcCCCCCCCCHHHHHH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FSPEDAGRSDRKFLYE 235 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~--f~~ed~~r~d~e~l~~ 235 (620)
..+||+...+..+..++..|++. |. ++ . .+.+.++..+.. |+ .+.. .+..+.+--..
T Consensus 72 T~~dI~~lc~eA~~~g~aaVCV~-P~---~V------------~---~a~~~L~~s~V~-V~tVigFP-~G~~~~~~Kv~ 130 (288)
T 3oa3_A 72 TGSQIDVLCAEAKEYGFATVCVR-PD---YV------------S---RAVQYLQGTQVG-VTCVIGFH-EGTYSTDQKVS 130 (288)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEC-GG---GH------------H---HHHHHTTTSSCE-EEEEESTT-TSCSCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEC-HH---HH------------H---HHHHHcCCCCCe-EEEEeCCC-CCCCcHHHHHH
Confidence 46677765554455688888764 32 11 1 122223333433 32 2332 24455555555
Q ss_pred HHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCC-CceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 236 ILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
-++.+++.||+.|-+.=-+|. ..-+.+.+-|..+++..++. -+++|+.-..+|--..- -+..|+++||+.|-+|
T Consensus 131 Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~-A~~ia~eaGADfVKTS- 208 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIA-GCVLSSLAGADYVKTS- 208 (288)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHH-HHHHHHHTTCSEEECC-
T ss_pred HHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHH-HHHHHHHcCCCEEEcC-
Confidence 667788899999887766776 34567888888888765431 14566666666554433 4678899999999999
Q ss_pred ccccCCcCcccHHHHHHHHH
Q 007056 312 NGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 312 ~GlGERaGNa~lEevv~~L~ 331 (620)
.|.+ .|++.+|++..+.+
T Consensus 209 TGf~--~~GAT~edv~lmr~ 226 (288)
T 3oa3_A 209 TGFN--GPGASIENVSLMSA 226 (288)
T ss_dssp CSSS--SCCCCHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHH
Confidence 7776 58899988654443
No 84
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=91.80 E-value=1.2 Score=44.94 Aligned_cols=111 Identities=13% Similarity=0.158 Sum_probs=74.7
Q ss_pred ceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEe----cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEEcC
Q 007056 149 PVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSP 222 (620)
Q Consensus 149 ~~i~~~~r~-~~~dI~~a~eal~~ag~~~v~i~~----~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~f~~ 222 (620)
|.+.--+.. ..+++..|++.+...|.+.+++.- ..+..+ + +.++ ..++...++. |+. |.+.+
T Consensus 132 PV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~--------~-~~v~--L~ai~~lk~~~~~p-Vi~d~ 199 (262)
T 1zco_A 132 PVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETAT--------R-FTLD--ISAVPVVKELSHLP-IIVDP 199 (262)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS--------S-SBCC--TTHHHHHHHHBSSC-EEECS
T ss_pred cEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC--------h-hhcC--HHHHHHHHhhhCCC-EEEEc
Confidence 555555554 778899999988888888777765 322211 1 1111 1233444554 776 65554
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCc--EEe--------ecCCccccCHHHHHHHHHHHHHh
Q 007056 223 EDAGRSDRKFLYEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 223 ed~~r~d~e~l~~~~~~~~~aGa~--~I~--------L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
+=+....+++..++.++...||+ .|- ++|-.=.+.|+++.++++.+++-
T Consensus 200 -sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 200 -SHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp -STTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred -CCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 33334456888889999999999 443 67999999999999999999863
No 85
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.77 E-value=0.35 Score=50.89 Aligned_cols=111 Identities=18% Similarity=0.177 Sum_probs=73.4
Q ss_pred ceEEeeccc-chhhHHHHHHHHhcCCCCEEEEE---ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEEcCC
Q 007056 149 PVICGLSRC-NERDIKTAWEAVKYAKRPRIHTF---IATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPE 223 (620)
Q Consensus 149 ~~i~~~~r~-~~~dI~~a~eal~~ag~~~v~i~---~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~f~~e 223 (620)
|.+.--+.. ..+++..|++.+...|.+.+.+. +.+.+..-...++. .++...|+. |+. |.+.+
T Consensus 215 PVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl----------~ai~~lk~~~~lp-Vi~ds- 282 (350)
T 1vr6_A 215 PVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDI----------SAVPIIRKESHLP-ILVDP- 282 (350)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCT----------THHHHHHHHBSSC-EEECH-
T ss_pred cEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhH----------HHHHHHHHhhCCC-EEEeC-
Confidence 555555553 67899999999988888777775 32222110111122 233344444 776 76654
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCc--EEe--------ecCCccccCHHHHHHHHHHHHH
Q 007056 224 DAGRSDRKFLYEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKA 271 (620)
Q Consensus 224 d~~r~d~e~l~~~~~~~~~aGa~--~I~--------L~DTvG~~~P~~v~~li~~l~~ 271 (620)
+=+.-..+++..+..+++.+||+ .|- ++|--=.++|+++.++++.+++
T Consensus 283 sHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~ 340 (350)
T 1vr6_A 283 SHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKK 340 (350)
T ss_dssp HHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHH
Confidence 22234557888888899999998 443 5699999999999999999886
No 86
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.73 E-value=13 Score=38.12 Aligned_cols=194 Identities=13% Similarity=0.152 Sum_probs=119.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHHH-HHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFE-AVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~e-~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|+. .++...+... +.+|.|++.+..+.++ |+.+
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~eai~la- 111 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-------GRIPVIAGTGANSTREAVALT- 111 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 478888899999999999998877 3 3555666653 4455555432 3357888887655444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+.. .+...+++.+.+++ + -
T Consensus 112 ~~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 176 (314)
T 3qze_A 112 EAAKSGGADACLLVTPYY-------NKPTQEGMYQHFRHIAEA---VAIPQILYNVPGRTSCDMLPETVERLS----K-V 176 (314)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---SCSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 334567999987776642 245666666555544433 35554566543 24456677766654 3 3
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.| ...++.++++ ..++ +..+ +-+.+++ .+.++..|++.+ +.| .+|..-+
T Consensus 177 pnIvgiKdssg--d~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~Ga~G~---is~----~an~~P~ 234 (314)
T 3qze_A 177 PNIIGIKEATG--DLQRAKEVIE----RVGK--DFLV-YSGDDAT------AVELMLLGGKGN---ISV----TANVAPR 234 (314)
T ss_dssp TTEEEEEECSC--CHHHHHHHHH----HSCT--TSEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEcCCC--CHHHHHHHHH----HcCC--CeEE-EecChHH------HHHHHHCCCCEE---Eec----HHhhhHH
Confidence 47899999988 3445555543 3432 2233 3344432 577888998654 433 4677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 235 ~~~~l~~a 242 (314)
T 3qze_A 235 AMSDLCAA 242 (314)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76655543
No 87
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=91.72 E-value=6.3 Score=39.43 Aligned_cols=197 Identities=12% Similarity=0.091 Sum_probs=95.9
Q ss_pred HHHHHHhHcCCCEEEEe--cCCC------ChhHHHHHHHHHHHhcccccccCCccceEEeecc-------cc-h------
Q 007056 102 DIARQLAKLGVDIIEAG--FPAA------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-------CN-E------ 159 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvG--fP~~------s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-------~~-~------ 159 (620)
+.++.+.++|++.||+. .|.. ++.+.+.++.+.+.. ++. .+++++. .. +
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------gl~-~~~~h~~~~~nl~s~d~~~~r~~~ 92 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAH--------GIE-EIVVHAPYIINIGNTTNLDTFSLG 92 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHT--------TCC-EEEEECCTTCCTTCSSCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHc--------CCc-eEEEeccccccCCCCCcHHHHHHH
Confidence 44555677899999992 2211 134556666665542 221 1222211 11 1
Q ss_pred -hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCEEEEcCCCCC----CCCHHH
Q 007056 160 -RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAG----RSDRKF 232 (620)
Q Consensus 160 -~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~--~G~~~V~f~~ed~~----r~d~e~ 232 (620)
+.++.+++.....|.+.|.+..... .+.+.++.++.+.+.++.+.+ .|+. +.+-+.... -.+++.
T Consensus 93 ~~~~~~~i~~A~~lGa~~vv~h~g~~-------~~~~~~~~~~~~~~~l~~l~~~a~gv~-l~lEn~~~~~~~~~~t~~~ 164 (303)
T 3aal_A 93 VDFLRAEIERTEAIGAKQLVLHPGAH-------VGAGVEAGLRQIIRGLNEVLTREQNVQ-IALETMAGKGSECGRTFEE 164 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCEEC-------TTSCHHHHHHHHHHHHHHHCCSSCSCE-EEEECCCCCTTEECSSHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcC-------CCCCHHHHHHHHHHHHHHHHHhCCCCE-EEEecCCCCCCccCCCHHH
Confidence 1223334444445777775543221 122566667766666665433 3442 333221111 126676
Q ss_pred HHHHHHHHHHcCC-cEEeec-CCc-----cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCc
Q 007056 233 LYEILGEVIKVGA-TTLNIP-DTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 233 l~~~~~~~~~aGa-~~I~L~-DTv-----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 305 (620)
+.++++.+ +- +.+.+| ||. |.-....+.++++.+.+.++. +-...+|.||..+- .|..
T Consensus 165 ~~~li~~v---~~~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~ 229 (303)
T 3aal_A 165 LAYIIDGV---AYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGL--GRLKVLHINDSKNP----------RGSR 229 (303)
T ss_dssp HHHHHHHC---TTGGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCC
T ss_pred HHHHHHhc---CCCCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCc--ccEEEEEeeCCCCc----------CCCC
Confidence 66666543 32 333333 553 322222455566665444431 13467888875441 0111
Q ss_pred EEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 306 QVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 306 ~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
.| .-..+|+ |+.+.+.++..|+..+
T Consensus 230 -~d-~h~~~G~--G~id~~~~~~~L~~~g 254 (303)
T 3aal_A 230 -KD-RHENIGF--GHIGFAALNYIVHHPQ 254 (303)
T ss_dssp -CC-CEECTTS--SSSCHHHHHHHHTCTT
T ss_pred -Cc-CCCCCCC--CCCCHHHHHHHHhCcC
Confidence 00 0112454 8899999999998765
No 88
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=91.64 E-value=3 Score=42.70 Aligned_cols=194 Identities=19% Similarity=0.243 Sum_probs=103.6
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCC
Q 007056 78 RVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESG 146 (620)
Q Consensus 78 ~I~DtTL---RDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~ 146 (620)
=|+-+|+ =||.+ .++.+..++.++.+.+.|-|+|.+|. |.+. ++|++.+..+.+.+... +
T Consensus 27 gilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-----~ 97 (294)
T 2y5s_A 27 GILNATPDSFSDGGR----FLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-----N 97 (294)
T ss_dssp EEEECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-----C
T ss_pred EEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-----C
Confidence 3444443 45543 36788999999999999999999997 5432 23455444444433211 1
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC---
Q 007056 147 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--- 223 (620)
Q Consensus 147 l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--- 223 (620)
. | | ..--.+.+-++.|+++ |.+.|+ .+|- .. + .++++.++++|+. |...+.
T Consensus 98 v-p-i-SIDT~~~~Va~aAl~a----Ga~iIN---dVsg--------~~-d------~~m~~~~a~~~~~-vVlmh~~G~ 151 (294)
T 2y5s_A 98 V-P-L-SIDTYKPAVMRAALAA----GADLIN---DIWG--------FR-Q------PGAIDAVRDGNSG-LCAMHMLGE 151 (294)
T ss_dssp S-C-E-EEECCCHHHHHHHHHH----TCSEEE---ETTT--------TC-S------TTHHHHHSSSSCE-EEEECCCEE
T ss_pred C-e-E-EEECCCHHHHHHHHHc----CCCEEE---ECCC--------CC-c------hHHHHHHHHhCCC-EEEECCCCC
Confidence 1 1 2 2223456667777776 777654 4432 11 1 1456677788875 444332
Q ss_pred --CC--C--C-CC-----HHHHHHHHHHHHHcCCc--EEeecCCccc-cCH-HHHHHHHHHHHHh------CCCCCceeE
Q 007056 224 --DA--G--R-SD-----RKFLYEILGEVIKVGAT--TLNIPDTVGI-TMP-TEFGKLIADIKAN------TPGIENVVI 281 (620)
Q Consensus 224 --d~--~--r-~d-----~e~l~~~~~~~~~aGa~--~I~L~DTvG~-~~P-~~v~~li~~l~~~------~~~~~~v~i 281 (620)
+. . . .| .+++.+.++.+.++|.. .|.|==-+|. -++ ++-.++++.+.+- .++ .|+
T Consensus 152 p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g---~Pv 228 (294)
T 2y5s_A 152 PQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRA---YPI 228 (294)
T ss_dssp TTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSB---CCB
T ss_pred CccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHHhccccCCC---CCE
Confidence 11 0 1 12 57888889999999986 3433212222 244 5556666666542 222 333
Q ss_pred EEecCC----------C----c-chHHHHHHHHHHhcCcEEee
Q 007056 282 STHCQN----------D----L-GLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 282 ~~H~HN----------D----~-GlAvANslaAv~aGA~~Vd~ 309 (620)
-+=.-| + + +.-.|-+..|++.||+.|.+
T Consensus 229 l~G~Srksfig~l~g~~~~~~R~~~t~a~~~~a~~~Ga~Ivrv 271 (294)
T 2y5s_A 229 LAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRV 271 (294)
T ss_dssp EEECTTCHHHHTTTTSCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEecccHHhhhhcCCCchhhhhHHHHHHHHHHHHcCCcEEEc
Confidence 332222 1 1 22344556778889888744
No 89
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=91.60 E-value=0.58 Score=45.59 Aligned_cols=169 Identities=14% Similarity=0.068 Sum_probs=89.8
Q ss_pred HHHHHHHHHhHcCCCEEEEec------CCCChhHHHHHHHHHHHhcccccccCCccceEEeecccch-hhHHHHHHHHhc
Q 007056 99 EKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKY 171 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGf------P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~ 171 (620)
.-.+.++.+.+.|++.||++. |.. ..-.+.+++|.+..+. +..+.+.-... +.++.+ ..
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~-~~~~~~i~~l~~~~~~---------~~~v~l~vnd~~~~v~~~----~~ 89 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-TIGPLVVDSLRPITDL---------PLDVHLMIVEPDQRVPDF----IK 89 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-CCCHHHHHHHGGGCCS---------CEEEEEESSSHHHHHHHH----HH
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCccccc-ccCHHHHHHHHhccCC---------cEEEEEEecCHHHHHHHH----HH
Confidence 456778889999999999983 433 2235667766653210 12222211111 234443 44
Q ss_pred CCCCEEEEEec--CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 007056 172 AKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 172 ag~~~v~i~~~--~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~ 249 (620)
+|++.|++-.. .++ ...+.++.+++.|+. +.+..- ..++.+.+..+ ..++|.|
T Consensus 90 ~Gad~v~vh~~~~~~~----------------~~~~~~~~~~~~g~~-ig~~~~--p~t~~e~~~~~-----~~~~d~v- 144 (230)
T 1rpx_A 90 AGADIVSVHCEQSSTI----------------HLHRTINQIKSLGAK-AGVVLN--PGTPLTAIEYV-----LDAVDLV- 144 (230)
T ss_dssp TTCSEEEEECSTTTCS----------------CHHHHHHHHHHTTSE-EEEEEC--TTCCGGGGTTT-----TTTCSEE-
T ss_pred cCCCEEEEEecCccch----------------hHHHHHHHHHHcCCc-EEEEeC--CCCCHHHHHHH-----HhhCCEE-
Confidence 69999877554 221 123566777777764 433321 12333333222 2478855
Q ss_pred ecCCcc-----ccCHHHHHHHHHHHHHhCCC-CCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 250 IPDTVG-----ITMPTEFGKLIADIKANTPG-IENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 250 L~DTvG-----~~~P~~v~~li~~l~~~~~~-~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
+.|+++ ...++...+.++.+++.++. ..++++.+ +.|....|.-.++++||+.|.+.
T Consensus 145 l~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 145 LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp EEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 355542 22233444556666654320 00133433 35555578888899999988654
No 90
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=91.54 E-value=4.2 Score=40.33 Aligned_cols=187 Identities=15% Similarity=0.101 Sum_probs=95.2
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe----------ecccc-------hhh
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----------LSRCN-------ERD 161 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----------~~r~~-------~~d 161 (620)
.-.+.++.+.++|++.||+..+...+.+.+.++.+.+..+-.+ ..+.. ++-.. .+.
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~ 114 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPI-------CAIGTGQAYLADGLSLTHPNDEIRKKAIER 114 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCE-------EEEECTHHHHTTCCCTTCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeE-------EEEeccCccccCCCCCCCCCHHHHHHHHHH
Confidence 3445566677889999999765433455666776666432211 12222 11011 123
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC------CCCCCHHHHHH
Q 007056 162 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED------AGRSDRKFLYE 235 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed------~~r~d~e~l~~ 235 (620)
++++++.....|.+.|. .+.+.. .-+.+.++.++.+.+.++.+.+...+ |.+..|- ..-.+++.+.+
T Consensus 115 ~~~~i~~A~~lG~~~v~--~~~~g~----~~~~~~~~~~~~~~~~l~~l~~~a~~-v~l~lEn~~~~~~~~~~~~~~~~~ 187 (290)
T 2zvr_A 115 VVKHTEVAGMFGALVII--GLVRGR----REGRSYEETEELFIESMKRLLELTEH-AKFVIEPLNRYETDFINTIDDALR 187 (290)
T ss_dssp HHHHHHHHHHHTCEEEE--SGGGCC----CTTSCHHHHHHHHHHHHHHHHHHCSS-CCEEECCCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEE--ecCCCC----CCCcCHHHHHHHHHHHHHHHHHHhcc-CEEEEEeCCCcCccccCCHHHHHH
Confidence 44455555555777664 221000 01234556666666665555444322 3333331 22246677777
Q ss_pred HHHHHHHcCCcEEeec-CCccc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 236 ILGEVIKVGATTLNIP-DTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~-DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
+++.+ +...+.++ ||.=. ..|. +.++.+.. -...+|.||.. +
T Consensus 188 l~~~~---~~~~vgl~~D~~h~~~~g~d~~---~~l~~~~~-------~i~~vHl~D~~----------------r---- 234 (290)
T 2zvr_A 188 ILRKI---NSNRVGILADTFHMNIEEVNIP---ESLKRAGE-------KLYHFHVADSN----------------R---- 234 (290)
T ss_dssp HHHHH---CCTTEEEEEEHHHHHHHCSSHH---HHHHHHGG-------GEEEEEECCTT----------------S----
T ss_pred HHHHc---CCCCEEEEEehhHhhhcCCCHH---HHHHHhhc-------cEEEEEEcCCC----------------C----
Confidence 77654 33333333 55311 1222 22333322 34688888841 0
Q ss_pred cccccCCcCcccHHHHHHHHHhccc
Q 007056 311 INGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 311 i~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.-+|+ |..+...++..|+..++
T Consensus 235 -~~~G~--G~id~~~~~~~L~~~gy 256 (290)
T 2zvr_A 235 -WAPGC--GHFDFRSVFNTLKEIGY 256 (290)
T ss_dssp -SSTTS--SCCCHHHHHHHHHHTTC
T ss_pred -CCCCC--cccCHHHHHHHHHHcCC
Confidence 13454 88999999999998664
No 91
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=91.50 E-value=13 Score=37.80 Aligned_cols=215 Identities=14% Similarity=0.132 Sum_probs=126.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ ++.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 95 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-------KRVPVIAGTGANNTVEAIALS- 95 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 478888899999999999998877 4 344556665 34455555432 3357888887655444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+... +...+++.+.+++ + -
T Consensus 96 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 160 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPYY-------NKPSQEGIYQHFKTIAEA---TSIPMIIYNVPGRTVVSMTNDTILRLA----E-I 160 (297)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSSCCCHHHHHHHT----T-S
T ss_pred HHHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEECCchhccCCCHHHHHHHH----c-C
Confidence 334567999887766632 244666665554444333 355545665432 3455667665553 2 3
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++ ..++ +..+ +-++++ ..+.++..|++.+ +.| .+|..-+
T Consensus 161 pnivgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 218 (297)
T 3flu_A 161 PNIVGVKEASGN--IGSNIELIN----RAPE--GFVV-LSGDDH------TALPFMLCGGHGV---ITV----AANAAPK 218 (297)
T ss_dssp TTEEEEEECSCC--HHHHHHHHH----HSCT--TCEE-EECCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHH----hcCC--CeEE-EECcHH------HHHHHHhCCCCEE---Eec----hHhhhHH
Confidence 478999999884 455555544 3332 2223 334433 2566788898644 433 5677777
Q ss_pred HHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhC
Q 007056 325 EVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTG 362 (620)
Q Consensus 325 evv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g 362 (620)
.++...+.. ..=|++.-.++-+.+..+..
T Consensus 219 ~~~~l~~a~---------~~Gd~~~A~~l~~~l~~l~~ 247 (297)
T 3flu_A 219 LFADMCRAA---------LQGDIALARELNDRLIPIYD 247 (297)
T ss_dssp HHHHHHHHH---------HHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH---------HCCCHHHHHHHHHHHHHHHH
Confidence 666555431 11144555555555555543
No 92
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.44 E-value=0.87 Score=46.81 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=84.5
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+|. +|+.--++.-
T Consensus 25 TPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 102 (304)
T 3l21_A 25 TPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTYDTAHSIRL 102 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHH
Confidence 4542 45799999999999999999999999999995 5899999999999987765 47777777 7999999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
+..|-++||+.+=..---+-. .+-++++..++.
T Consensus 103 a~~a~~~Gadavlv~~P~y~~----~s~~~l~~~f~~ 135 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSK----PPQRGLQAHFTA 135 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 999999999998665433221 255666665554
No 93
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=91.40 E-value=4.6 Score=42.34 Aligned_cols=117 Identities=23% Similarity=0.271 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee-----------------ccc
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-----------------SRC 157 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-----------------~r~ 157 (620)
.+.+.-++=+..|.++|.|.|.++.|. +++.++++.|.+.... |.+.-. -|-
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~--~~~a~al~~I~~~~~v---------PlvaDiHf~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH--KEDVEALEEIVKKSPM---------PVIADIHFAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS--HHHHHHHHHHHHHCSS---------CEEEECCSCHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC--hHHHHHHHHHHhcCCC---------CEEEeCCCCHHHHHHHHHhCCCeEEE
Confidence 677888888999999999999999984 6778899999886421 222221 122
Q ss_pred chhhH------HHHHHHHhcCCCC-EEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 158 NERDI------KTAWEAVKYAKRP-RIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 158 ~~~dI------~~a~eal~~ag~~-~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
++..| +.-+++.++.+.+ ||.+--..=+-++..+++ -+.+..++-+.+.++.+.++|+..+.+|+
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~ 184 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSI 184 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 22222 2233444444544 343332222334444554 46666667777777777777765555555
No 94
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=91.36 E-value=4 Score=41.25 Aligned_cols=164 Identities=19% Similarity=0.241 Sum_probs=93.3
Q ss_pred HHHHHHHHHhHcCCCEEEEec-CCCChhHHHHHHHHHHHhcccccccCCccceEEe-ecccchhhHHHHHHHHhcCCCCE
Q 007056 99 EKLDIARQLAKLGVDIIEAGF-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKRPR 176 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGf-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~ag~~~ 176 (620)
+-.++++...+.|.+.|.+-. +....+.++.++.+.+.+. .|.++. |. -++..++.+. .+|++.
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~---------lPvl~kdfi-id~~qv~~A~----~~GAD~ 138 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVS---------IPVLRKDFV-VQPYQIHEAR----AHGADM 138 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCS---------SCEEEESCC-CSHHHHHHHH----HTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCC---------CCEEECccc-cCHHHHHHHH----HcCCCE
Confidence 346789999999999999842 2223344567777766531 133322 21 1222355554 359999
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccc
Q 007056 177 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI 256 (620)
Q Consensus 177 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~ 256 (620)
|++-.+.-+ . +.+.+.+++++++|+. +-+.. ++++.+ +.+.++|++.|.+--....
T Consensus 139 VlLi~a~l~----------~----~~l~~l~~~a~~lGl~-~lvev-----~t~ee~----~~A~~~Gad~IGv~~r~l~ 194 (272)
T 3qja_A 139 LLLIVAALE----------Q----SVLVSMLDRTESLGMT-ALVEV-----HTEQEA----DRALKAGAKVIGVNARDLM 194 (272)
T ss_dssp EEEEGGGSC----------H----HHHHHHHHHHHHTTCE-EEEEE-----SSHHHH----HHHHHHTCSEEEEESBCTT
T ss_pred EEEecccCC----------H----HHHHHHHHHHHHCCCc-EEEEc-----CCHHHH----HHHHHCCCCEEEECCCccc
Confidence 998655321 1 3456778889999985 43433 445544 3344679998887632221
Q ss_pred cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEE
Q 007056 257 TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQV 307 (620)
Q Consensus 257 ~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~V 307 (620)
..+..+ +.+..+.+.+|. ++++-. -.|.. ..|.....++||+.|
T Consensus 195 ~~~~dl-~~~~~l~~~v~~--~~pvVa----egGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 195 TLDVDR-DCFARIAPGLPS--SVIRIA----ESGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp TCCBCT-THHHHHGGGSCT--TSEEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred ccccCH-HHHHHHHHhCcc--cCEEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 111111 233445555652 233322 13333 567778888898876
No 95
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=91.27 E-value=3 Score=42.48 Aligned_cols=148 Identities=14% Similarity=0.189 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 164 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 164 (620)
..++.+..++.++.+.+.|.|+|.+|. |.+. .+|.+.+..+.+.+.... + ..|+. --.+.+-++.
T Consensus 33 ~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~--~piSI-DT~~~~va~a 105 (282)
T 1aj0_A 33 THNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----E--VWISV-DTSKPEVIRE 105 (282)
T ss_dssp CCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----C--CEEEE-ECCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----C--CeEEE-eCCCHHHHHH
Confidence 346889999999999999999999996 4422 345555544444332110 1 11222 2235666777
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--------------H
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD--------------R 230 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d--------------~ 230 (620)
|+++ |.+.|+ .+|-. ...++++.++++|+. +...+..+...+ .
T Consensus 106 Al~a----Ga~iIN---dvsg~---------------~d~~~~~~~a~~~~~-vVlmh~~G~p~tm~~~~~y~d~~~ev~ 162 (282)
T 1aj0_A 106 SAKV----GAHIIN---DIRSL---------------SEPGALEAAAETGLP-VCLMHMQGNPKTMQEAPKYDDVFAEVN 162 (282)
T ss_dssp HHHT----TCCEEE---ETTTT---------------CSTTHHHHHHHHTCC-EEEECCSSCTTCCSCCCCCSCHHHHHH
T ss_pred HHHc----CCCEEE---ECCCC---------------CCHHHHHHHHHhCCe-EEEEccCCCCccccccCccchHHHHHH
Confidence 7665 877664 44321 011445666778886 444332211111 6
Q ss_pred HHHHHHHHHHHHcCCc--EEeecCCcccc-CHHHHHHHHHHHH
Q 007056 231 KFLYEILGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIK 270 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~--~I~L~DTvG~~-~P~~v~~li~~l~ 270 (620)
+++.+.++.+.++|.. .|.|==-+|.. ++++-.++++.+.
T Consensus 163 ~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~ 205 (282)
T 1aj0_A 163 RYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLA 205 (282)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHH
Confidence 8899999999999986 34432122322 4555556666554
No 96
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=91.17 E-value=3.6 Score=41.39 Aligned_cols=149 Identities=17% Similarity=0.128 Sum_probs=89.6
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE--EcCCCCCCCCHHHHHH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FSPEDAGRSDRKFLYE 235 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~--f~~ed~~r~d~e~l~~ 235 (620)
..++|+...+..+..+...|+++ |. + +. .+.+.++..+.. |+ .+.. .+..+.+--..
T Consensus 57 t~~~I~~lc~eA~~~~~aaVCV~-p~---~------------V~---~a~~~L~gs~v~-v~tVigFP-~G~~~~~~Kv~ 115 (260)
T 3r12_A 57 TPDDIKKLCLEARENRFHGVCVN-PC---Y------------VK---LAREELEGTDVK-VVTVVGFP-LGANETRTKAH 115 (260)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEC-GG---G------------HH---HHHHHHTTSCCE-EEEEESTT-TCCSCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEC-HH---H------------HH---HHHHHhcCCCCe-EEEEecCC-CCCCcHHHHHH
Confidence 56677665555555677777652 21 1 11 122233333432 22 2443 33444454445
Q ss_pred HHHHHHHcCCcEEeecCCcccc---CHHHHHHHHHHHHHhCCCCC-ceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 236 ILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~DTvG~~---~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
-++.+++.||+.|-+.=-+|.+ .-+.+.+-|..+++..++.. +++|+.-..+|--. ..-+..|.++||+.|-+|
T Consensus 116 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaGADfVKTS- 193 (260)
T 3r12_A 116 EAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAGAHFVKTS- 193 (260)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTTCSEEECC-
T ss_pred HHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhCcCEEEcC-
Confidence 5666777899988877777764 55667777777777654321 45566655555444 334677899999999999
Q ss_pred ccccCCcCcccHHHHHHHHH
Q 007056 312 NGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 312 ~GlGERaGNa~lEevv~~L~ 331 (620)
.|.+ .|++.+|++-.+.+
T Consensus 194 TGf~--~~GAT~edV~lm~~ 211 (260)
T 3r12_A 194 TGFG--TGGATAEDVHLMKW 211 (260)
T ss_dssp CSSS--SCCCCHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHH
Confidence 5554 57899988665444
No 97
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=91.01 E-value=6.5 Score=40.58 Aligned_cols=150 Identities=17% Similarity=0.266 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCCh----hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 164 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 164 (620)
..++.+..++.++.+.+.|-|+|.+|. |++.+ +|++.+..+.+.+... . + ..| ..--.+.+-++.
T Consensus 28 ~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~-~---~--vpi-SIDT~~~~Va~a 100 (314)
T 2vef_A 28 QFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE-S---D--VLI-SIDTWKSQVAEA 100 (314)
T ss_dssp --CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH-C---C--CEE-EEECSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh-C---C--ceE-EEeCCCHHHHHH
Confidence 346889999999999999999999997 54432 3444443333322111 0 1 112 223345566677
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-------CCC-----------
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-------DAG----------- 226 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-------d~~----------- 226 (620)
|+++ |.+.|+ .+|- +... + ++.+.++++|+. |..... +..
T Consensus 101 Al~a----Ga~iIN---DVsg------~~~d-~-------~m~~v~a~~~~~-vvlmh~~~~g~p~~~~~~~~~~~~~g~ 158 (314)
T 2vef_A 101 ALAA----GADLVN---DITG------LMGD-E-------KMPHVVAEARAQ-VVIMFNPVMARPQHPSSLIFPHFGFGQ 158 (314)
T ss_dssp HHHT----TCCEEE---ETTT------TCSC-T-------THHHHHHHHTCE-EEEECCHHHHCTTSTTTTTSCCCCC--
T ss_pred HHHc----CCCEEE---ECCC------CCCC-h-------HHHHHHHHcCCC-EEEEecCCCCCCCCccccccccccccc
Confidence 7665 777664 3332 1111 1 344556778875 444221 100
Q ss_pred ----C---------C-C--HHHHHHHHHHHHHcCCc--EEeecCC-ccc-cCHHHHHHHHHHHHHh
Q 007056 227 ----R---------S-D--RKFLYEILGEVIKVGAT--TLNIPDT-VGI-TMPTEFGKLIADIKAN 272 (620)
Q Consensus 227 ----r---------~-d--~e~l~~~~~~~~~aGa~--~I~L~DT-vG~-~~P~~v~~li~~l~~~ 272 (620)
. . + .+++.+.++.+.++|+. .|.| |- +|. -++++-.++++.+++-
T Consensus 159 ~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil-DPGiGF~kt~~~nl~ll~~l~~l 223 (314)
T 2vef_A 159 AFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL-DPGIGFGLTKKENLLLLRDLDKL 223 (314)
T ss_dssp CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccchHHHHHHHHHHHHh
Confidence 0 0 0 24566677788889983 4443 43 343 3455666677766653
No 98
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=90.82 E-value=14 Score=36.60 Aligned_cols=209 Identities=15% Similarity=0.149 Sum_probs=110.7
Q ss_pred CCCCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC---------ChhHHHHHHHHHHHhcccc
Q 007056 71 IPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAV 141 (620)
Q Consensus 71 ~~~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~---------s~~d~e~v~~i~~~~~~~~ 141 (620)
++.|.++=|.--|+|+. ++.++.++. +.++|++.||+.++.. ++++.+.++.+.+..
T Consensus 13 ~~~~~~~gi~~~~~~~~-------~~~~~~l~~---~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 78 (295)
T 3cqj_A 13 LSKQIPLGIYEKALPAG-------ECWLERLQL---AKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET---- 78 (295)
T ss_dssp ---CCCEEEEGGGSCCC-------SCHHHHHHH---HHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH----
T ss_pred ccccccceeeeecCCCC-------CCHHHHHHH---HHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHc----
Confidence 45566688888888752 567666555 5678999999976432 234455566555543
Q ss_pred cccCCccc-eEEe-------ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHH
Q 007056 142 DAESGYVP-VICG-------LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEI 202 (620)
Q Consensus 142 ~~~~~l~~-~i~~-------~~r~~~-------~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~ 202 (620)
++.. .++. ++...+ +.++++++.....|.+.|.+... ... .+.+ .+...+.
T Consensus 79 ----gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~-----~~~~~~~~~~~~~~~ 148 (295)
T 3cqj_A 79 ----GVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGY-DVY-----YQEANNETRRRFRDG 148 (295)
T ss_dssp ----CCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC-SCS-----SSCCCHHHHHHHHHH
T ss_pred ----CCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC-CCC-----cCcCHHHHHHHHHHH
Confidence 2211 1211 111111 23445555555568887765421 100 0111 2445566
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHHHcCCcEEeec-CCcc----ccCHHHHHHHHHHHHHhCCCC
Q 007056 203 ARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGATTLNIP-DTVG----ITMPTEFGKLIADIKANTPGI 276 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~ed~-~r~d~e~l~~~~~~~~~aGa~~I~L~-DTvG----~~~P~~v~~li~~l~~~~~~~ 276 (620)
+.++.++|++.|+. +.+-+... .-.+++.+.++++.+ +...+.++ ||.= ...|. ..+++ +.+
T Consensus 149 l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~~------~~l~~-~~~- 216 (295)
T 3cqj_A 149 LKESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYL---NNPWFQLYPDIGNLSAWDNDVQ------MELQA-GIG- 216 (295)
T ss_dssp HHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHH---CCTTEEEECBHHHHHSSSCCHH------HHHHH-TGG-
T ss_pred HHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhc---CCCCeEEEeccchHhhcCCCHH------HHHHH-hcc-
Confidence 67777888888874 55533221 134567777776654 43344443 6521 12232 23332 221
Q ss_pred CceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 277 ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 277 ~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
-...+|.+|..+ |... -..+|+ |..+.++++..|+..++
T Consensus 217 --~i~~vHl~D~~~------------g~~~----~~p~G~--G~id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 217 --HIVAVHVKDTKP------------GVFK----NVPFGE--GVVDFERCFETLKQSGY 255 (295)
T ss_dssp --GBCCEEECEEET------------TEEE----EECTTS--SSCCHHHHHHHHHHTTC
T ss_pred --ceEEEEeecCCC------------CccC----CcCCCC--CccCHHHHHHHHHHCCC
Confidence 234788887531 2111 123454 89999999999998663
No 99
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.78 E-value=0.96 Score=46.12 Aligned_cols=102 Identities=19% Similarity=0.141 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++-|.++-|+|= ++.+|-.++++.+.+...+ +++|-+|+ +|+.--++..+..|-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK--RIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999994 6899999999999887765 46666665 789999999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
++||+.+=..---+- + .+-++++..++.
T Consensus 94 ~~Gadavlv~~P~y~-~---~~~~~l~~~f~~ 121 (291)
T 3tak_A 94 DLGADAALLVTPYYN-K---PTQEGLYQHYKA 121 (291)
T ss_dssp HHTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred hcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 999999865543322 2 345666655543
No 100
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=90.66 E-value=1.5 Score=46.73 Aligned_cols=18 Identities=22% Similarity=0.185 Sum_probs=15.3
Q ss_pred cCcccHHHHHHHHHhccc
Q 007056 318 AGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 318 aGNa~lEevv~~L~~~~~ 335 (620)
.|..+..+++.+|...++
T Consensus 306 ~G~vD~~~i~~aL~~~gY 323 (386)
T 3bdk_A 306 AGDIDMNAVVKLLVDYDW 323 (386)
T ss_dssp GSSCCHHHHHHHHHHTTC
T ss_pred CCCcCHHHHHHHHHHhCC
Confidence 699999999999998653
No 101
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=90.62 E-value=2.5 Score=43.14 Aligned_cols=146 Identities=11% Similarity=0.107 Sum_probs=82.8
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCC---EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCC
Q 007056 149 PVICGLSRCNERDIKTAWEAVKYAKRP---RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPE 223 (620)
Q Consensus 149 ~~i~~~~r~~~~dI~~a~eal~~ag~~---~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~e 223 (620)
|.+..+.-...++...+++.+..+|++ .|.+-.++-.......++.+.+.. .+.++.+++. ++. .|-.++.
T Consensus 95 p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~----~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 95 PLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAM----RTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHH----HHHHHHHHHHHCSCEEEEECCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHH----HHHHHHHHHhcCCCEEEEECCC
Confidence 333333334567777777766666777 666654321111111233455443 3344444432 343 1333542
Q ss_pred CCCCCCHHHHHHHHHHHHHcC-CcEEeecCCcc----------------------ccCH---HHHHHHHHHHHHhCCCCC
Q 007056 224 DAGRSDRKFLYEILGEVIKVG-ATTLNIPDTVG----------------------ITMP---TEFGKLIADIKANTPGIE 277 (620)
Q Consensus 224 d~~r~d~e~l~~~~~~~~~aG-a~~I~L~DTvG----------------------~~~P---~~v~~li~~l~~~~~~~~ 277 (620)
.+.+.+.++++.+.++| ++.|.+.+|.| +.-| ....+.++.+++.++
T Consensus 171 ----~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~--- 243 (314)
T 2e6f_A 171 ----FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCP--- 243 (314)
T ss_dssp ----CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCT---
T ss_pred ----CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcC---
Confidence 36778889999999999 99999888763 1111 123478888888774
Q ss_pred ceeEEEecCCCcchH-HHHHHHHHHhcCcEEee
Q 007056 278 NVVISTHCQNDLGLS-TANTIAGACAGARQVEV 309 (620)
Q Consensus 278 ~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~ 309 (620)
+++|-.=+ |.- ...+..++.+||+.|..
T Consensus 244 ~ipvi~~G----GI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 244 DKLVFGCG----GVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp TSEEEEES----SCCSHHHHHHHHHHTCSSEEE
T ss_pred CCCEEEEC----CCCCHHHHHHHHHcCCCEEEE
Confidence 35554332 322 34667777889988743
No 102
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=90.53 E-value=9.2 Score=38.93 Aligned_cols=181 Identities=19% Similarity=0.194 Sum_probs=112.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhH-HHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWE 167 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~e 167 (620)
..+.+.-..+++.-.+++-+.|=-.+|... ... ...++.+++.. -+|...=+--+ ..+.+..+++
T Consensus 25 v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~---------~VPValHlDHg~~~e~i~~ai~ 95 (286)
T 1gvf_A 25 IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTY---------NMPLALHLDHHESLDDIRRKVH 95 (286)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHT---------TSCBEEEEEEECCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhC---------CCcEEEEcCCCCCHHHHHHHHH
Confidence 457889999999999999986644455321 111 23445555432 13444433333 3456666665
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCC--------CCCCCHHHH
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--------AGRSDRKFL 233 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed--------~~r~d~e~l 233 (620)
+ |...|.+ .. | ..+.||+++..++.+++|+..|+. |+- +-|| ...|+|+.+
T Consensus 96 ~----GFtSVMi-Dg-S--------~lp~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgg~ed~~~~~~~~~~~T~Peea 160 (286)
T 1gvf_A 96 A----GVRSAMI-DG-S--------HFPFAENVKLVKSVVDFCHSQDCS-VEAELGRLGGVEDDMSVDAESAFLTDPQEA 160 (286)
T ss_dssp T----TCCEEEE-CC-T--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCC-----------CCSSCCHHHH
T ss_pred c----CCCeEEE-CC-C--------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCcccCcccccccccCCCHHHH
Confidence 4 8887744 33 2 246799999999999999999974 532 1232 235899988
Q ss_pred HHHHHHHHHcCCcEEeec--CCcccc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 234 YEILGEVIKVGATTLNIP--DTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~--DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+++++ .|+|.+-++ -.=|.- .|.-=.++++.+++.++ +||-+|+= .|.....-..|+..|+.-|
T Consensus 161 ~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~----vpLVlHGg--SG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 161 KRFVEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD----VPLVLHGA--SDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp HHHHHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC----SCEEECCC--TTCCHHHHHHHHHTTEEEE
T ss_pred HHHHHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC----CCEEEECC--CCCCHHHHHHHHHCCCeEE
Confidence 887764 688855443 111211 23333467778888774 78988773 4556666677777776665
No 103
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.50 E-value=1.1 Score=45.77 Aligned_cols=106 Identities=19% Similarity=0.174 Sum_probs=82.9
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.+.++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-+|+ +|+.--++..
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 94 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNTVEAIAL 94 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 4443 3579999999999999999999999999999 46899999999999887765 46666665 7899999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 95 a~~a~~~Gadavlv~~P~y~-~---~~~~~l~~~f~~ 127 (297)
T 3flu_A 95 SQAAEKAGADYTLSVVPYYN-K---PSQEGIYQHFKT 127 (297)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999866543322 2 244666655543
No 104
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.48 E-value=6.2 Score=40.82 Aligned_cols=161 Identities=14% Similarity=0.156 Sum_probs=79.2
Q ss_pred eEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CC--CC-hhHHHHHHHHHHHhcccccccCC
Q 007056 77 VRVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PA--AS-KEDFEAVRTIAKEVGNAVDAESG 146 (620)
Q Consensus 77 V~I~DtTL---RDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~--~s-~~d~e~v~~i~~~~~~~~~~~~~ 146 (620)
+=|+.+|. =||.+ .++.+..++.++.+.+.|-|+|++|. |+ .+ ++|.+.+.-+.+.+..... +
T Consensus 45 MGIlNvTPDSFsdgg~----~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~---~ 117 (318)
T 2vp8_A 45 MAIVNRTPDSFYDKGA----TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP---D 117 (318)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST---T
T ss_pred EEEEeCCCCcccCCCc----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC---C
Confidence 34555554 56654 45789999999999999999999996 44 22 2344443222222211100 0
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 147 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 147 l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
.....--.+.+-++.++++ |.+.|+ .+|- .. + .++++.++++|+. ++..+..+.
T Consensus 118 ---vpISIDT~~~~VaeaAl~a----Ga~iIN---DVsg--------~~-d------~~m~~vaa~~g~~-vVlmh~~G~ 171 (318)
T 2vp8_A 118 ---QLISVDTWRAQVAKAACAA----GADLIN---DTWG--------GV-D------PAMPEVAAEFGAG-LVCAHTGGA 171 (318)
T ss_dssp ---CEEEEECSCHHHHHHHHHH----TCCEEE---ETTS--------SS-S------TTHHHHHHHHTCE-EEEECC---
T ss_pred ---CeEEEeCCCHHHHHHHHHh----CCCEEE---ECCC--------CC-c------hHHHHHHHHhCCC-EEEECCCCC
Confidence 1122233456677777776 777554 4442 11 1 1455666778875 544332211
Q ss_pred --C-----CC------------HHHHHHHHHHHHHcCCc--EEeecCCcccc-CHHHHHHHHHHHH
Q 007056 227 --R-----SD------------RKFLYEILGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIK 270 (620)
Q Consensus 227 --r-----~d------------~e~l~~~~~~~~~aGa~--~I~L~DTvG~~-~P~~v~~li~~l~ 270 (620)
+ .+ .+|+.+.++.+.++|+. .|.|==-+|.. +.++-.++++.+.
T Consensus 172 ~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~ 237 (318)
T 2vp8_A 172 LPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVA 237 (318)
T ss_dssp ----------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHH
Confidence 1 11 16777888888999985 34332122322 3455555655554
No 105
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.30 E-value=1.3 Score=45.58 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=81.5
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+++ +|+.--++..
T Consensus 21 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 98 (303)
T 2wkj_A 21 TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCVSTAESQQL 98 (303)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 4432 3678999999999999999999999999998 57899999999999987665 46666665 6788888999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=..---+-. .+-++++..++
T Consensus 99 a~~A~~~Gadavlv~~P~y~~----~s~~~l~~~f~ 130 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYP----FSFEEHCDHYR 130 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred HHHHHhCCCCEEEecCCCCCC----CCHHHHHHHHH
Confidence 999999999998665443321 24556655443
No 106
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=90.20 E-value=7.5 Score=38.35 Aligned_cols=195 Identities=18% Similarity=0.143 Sum_probs=117.2
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc
Q 007056 78 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC 157 (620)
Q Consensus 78 ~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~ 157 (620)
..+|-|| .+...+.++..++.+...+.|+..+-+ +|. +++... .+... . ..+..+.+|--.
T Consensus 15 ~~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~-------~v~~a~-~l~~~---~-v~v~tVigFP~G 75 (231)
T 3ndo_A 15 ALVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV-SPP-------LVSVAA-GVAPS---G-LAIAAVAGFPSG 75 (231)
T ss_dssp TTEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGG-------GHHHHH-HHCCT---T-CEEEEEESTTTC
T ss_pred HhcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE-CHH-------HHHHHH-HhcCC---C-CeEEEEecCCCC
Confidence 3566666 224578999999999999999999988 554 233333 33221 0 112223333211
Q ss_pred c-hhh--HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----CH
Q 007056 158 N-ERD--IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS----DR 230 (620)
Q Consensus 158 ~-~~d--I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~----d~ 230 (620)
. ... +..+-+++. .|.+.|.+++.... -.....+++.+.+...++.+...-+ .|.+ |.. .- ++
T Consensus 76 ~~~~~~K~~E~~~Ai~-~GAdEIDmVinig~-----lk~g~~~~v~~ei~~v~~a~~~~~l-KvIi--Et~-~L~~~~t~ 145 (231)
T 3ndo_A 76 KHVPGIKATEAELAVA-AGATEIDMVIDVGA-----ALAGDLDAVSADITAVRKAVRAATL-KVIV--ESA-ALLEFSGE 145 (231)
T ss_dssp CSCHHHHHHHHHHHHH-TTCSEEEEECCHHH-----HHTTCHHHHHHHHHHHHHHTTTSEE-EEEC--CHH-HHHHHTCH
T ss_pred CCcHHHHHHHHHHHHH-cCCCEEEEEeehHh-----hhcccHHHHHHHHHHHHHHccCCce-EEEE--ECc-ccCCCCCH
Confidence 1 112 222334443 49999999876542 1234567788888888777753212 2433 221 33 77
Q ss_pred HHHHHHHHHHHHcCCcEEeecC--C-ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 231 KFLYEILGEVIKVGATTLNIPD--T-VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~D--T-vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+.+...++.+.++|||-|--.- + .|.++++.+.-+-+.+...+ .+..+==.+ + ...+++-+++||++|
T Consensus 146 eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~~v----~VKaaGGIr-t----~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 146 PLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERL----GVKASGGIR-T----AEQAAAMLDAGATRL 216 (231)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTTTS----EEEEESSCC-S----HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCCc----eEEEeCCCC-C----HHHHHHHHHhcchhc
Confidence 8999999999999999987664 2 46788887776655544222 133321112 2 267888889999988
Q ss_pred eec
Q 007056 308 EVT 310 (620)
Q Consensus 308 d~T 310 (620)
=+|
T Consensus 217 GtS 219 (231)
T 3ndo_A 217 GLS 219 (231)
T ss_dssp EES
T ss_pred ccc
Confidence 544
No 107
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=89.97 E-value=2 Score=45.29 Aligned_cols=177 Identities=12% Similarity=0.119 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-----hhHHHHHHHHHHHhcccccccCCccceEEe-----------
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG----------- 153 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----------- 153 (620)
.++.+++++.+. ++|++.||+. +|... +.+.+.++++.+..+-.+ ..++.
T Consensus 32 ~~~~~e~l~~aa---~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g 101 (387)
T 1bxb_A 32 RLDPVYVVHKLA---ELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKV-------PMVTANLFSDPAFKDG 101 (387)
T ss_dssp CCCHHHHHHHHH---HHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGGGC
T ss_pred CCCHHHHHHHHH---HhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEE-------EEEecCCCCCccccCC
Confidence 357777666655 5599999998 67432 345566666655433221 11221
Q ss_pred -ecccch-------hhHHHHHHHHhcCCCCEEEEEecCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEc
Q 007056 154 -LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATS--GIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFS 221 (620)
Q Consensus 154 -~~r~~~-------~dI~~a~eal~~ag~~~v~i~~~~S--d~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~ 221 (620)
++...+ +.++++++.....|.+.|.+..+.. +...........+...+.+.++++++++. |+. +.+-
T Consensus 102 ~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~-l~lE 180 (387)
T 1bxb_A 102 AFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYR-FALE 180 (387)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCE-EEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcE-EEEe
Confidence 111111 2234455555556888886654311 00000011233466778888888999988 553 5443
Q ss_pred CCC------CCCCCHHHHHHHHHHHHHcCCcE-Eee-cCCccccCH--HHHHHHHHHHHHhCCCCCceeEEEecCCCcc
Q 007056 222 PED------AGRSDRKFLYEILGEVIKVGATT-LNI-PDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLG 290 (620)
Q Consensus 222 ~ed------~~r~d~e~l~~~~~~~~~aGa~~-I~L-~DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~G 290 (620)
+.. ..-.+++.+.++++ +.+... +.+ .||. .+.. ..+.+.++.+.. .+ -...+|+++..+
T Consensus 181 ~~~~~~~~~~~~~t~~~~~~ll~---~v~~~~~vgl~lD~g-H~~~~g~d~~~~l~~~~~-~~----~i~~vHl~D~~~ 250 (387)
T 1bxb_A 181 PKPNEPRGDIYFATVGSMLAFIH---TLDRPERFGLNPEFA-HETMAGLNFVHAVAQALD-AG----KLFHIDLNDQRM 250 (387)
T ss_dssp CCSSSSSSEESSCSHHHHHHHHT---TSSSGGGEEECCBHH-HHHHTTCCHHHHHHHHHH-TT----CBCCEECCBCCS
T ss_pred cCCCCCCCCccCCCHHHHHHHHH---HcCCccceEEEEecC-cccccCCCHHHHHHHhcc-CC----cEEEEEeCCCCC
Confidence 322 12235666666664 345443 443 4662 2211 123344444441 12 235788888643
No 108
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=89.95 E-value=1.3 Score=45.36 Aligned_cols=105 Identities=20% Similarity=0.168 Sum_probs=80.6
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-++ ++|+.--++..
T Consensus 22 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 99 (301)
T 1xky_A 22 TPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSNNTHASIDL 99 (301)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHH
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCCCHHHHHHH
Confidence 4443 3578999999999999999999999999988 56899999999999887655 3555554 47888899999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=..---+- + .+-++++..++
T Consensus 100 a~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~ 131 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYN-K---PSQEGMYQHFK 131 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 99999999999866544332 2 24456655444
No 109
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=89.92 E-value=15 Score=37.78 Aligned_cols=166 Identities=16% Similarity=0.075 Sum_probs=100.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh-hHHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 171 (620)
..+.+.-..+++.-.+++-+.|=-.+|.... ...+.+..+....-.. -+|...=+--+ ..+.+..+++
T Consensus 24 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~------~VPValHlDHg~~~e~~~~ai~---- 93 (305)
T 1rvg_A 24 VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEA------RVPVAVHLDHGSSYESVLRALR---- 93 (305)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC------SSCEEEEEEEECSHHHHHHHHH----
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhC------CCcEEEECCCCCCHHHHHHHHH----
Confidence 4578999999999999999977554543211 0122222222211000 13444333333 3344555544
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCC--------CCCCHHHHHHHH
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDA--------GRSDRKFLYEIL 237 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~--------~r~d~e~l~~~~ 237 (620)
+|...|.+=.| ..+.||+++..++.+++|+..|+. |+- +-||. ..|+|+.+.+++
T Consensus 94 ~GFtSVMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv 162 (305)
T 1rvg_A 94 AGFTSVMIDKS----------HEDFETNVRETRRVVEAAHAVGVT-VEAELGRLAGIEEHVAVDEKDALLTNPEEARIFM 162 (305)
T ss_dssp TTCSEEEECCT----------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCSCC------CCTTCCCHHHHHHHH
T ss_pred cCCCeeeeCCC----------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCccCCccccccccccCCHHHHHHHH
Confidence 48888754322 257899999999999999999974 532 22432 358999888887
Q ss_pred HHHHHcCCcEEeec--CCccccC----HHHHHHHHHHHHHhCCCCCceeEEEecCC
Q 007056 238 GEVIKVGATTLNIP--DTVGITM----PTEFGKLIADIKANTPGIENVVISTHCQN 287 (620)
Q Consensus 238 ~~~~~aGa~~I~L~--DTvG~~~----P~~v~~li~~l~~~~~~~~~v~i~~H~HN 287 (620)
++ .|+|.+-++ -.=|... |.==.++++.+++.+| +||-+|+=.
T Consensus 163 ~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~----vpLVlHGgS 211 (305)
T 1rvg_A 163 ER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP----APLVLHGAS 211 (305)
T ss_dssp HH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC----SCEEECSCC
T ss_pred HH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC----CCEEEeCCC
Confidence 65 588865544 3334333 3323467888888885 789999743
No 110
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=89.85 E-value=0.56 Score=46.27 Aligned_cols=190 Identities=10% Similarity=0.014 Sum_probs=100.8
Q ss_pred HHHHHHhHcCCCEEEEecCC--CChhHHHHHHHHHHHhcccccccCCccceEEeec-ccch-hhHHHHHHHHhcCCCCEE
Q 007056 102 DIARQLAKLGVDIIEAGFPA--ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNE-RDIKTAWEAVKYAKRPRI 177 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~--~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~-~dI~~a~eal~~ag~~~v 177 (620)
+.++.+.++|++.||+.... ..+ +.+.++++.+..+-.+. ...+. .-+. .... +.++.+++.....|.+.|
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~---~~~~~-~~~~~~~~~~~~~~~~i~~A~~lGa~~v 101 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECV---FSSPL-ELWREDGQLNPELEPTLRRAEACGAGWL 101 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEE---EEEEE-EEECTTSSBCTTHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEE---Eecch-hhcCCchhHHHHHHHHHHHHHHcCCCEE
Confidence 46677788899999996321 122 55666665554321110 00000 0011 0122 567777777677799988
Q ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHHHcCCcEEee-cCCcc
Q 007056 178 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGATTLNI-PDTVG 255 (620)
Q Consensus 178 ~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~-~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG 255 (620)
.+.....+. .+ .+.++.++|++.|+. +.+-+... .-.+++.+.++++.+.+.+.. +.+ -||.-
T Consensus 102 ~~~~g~~~~----------~~---~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g~ 166 (264)
T 1yx1_A 102 KVSLGLLPE----------QP---DLAALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIGN 166 (264)
T ss_dssp EEEEECCCS----------SC---CHHHHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETTG
T ss_pred EEecCCCCc----------HH---HHHHHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehhh
Confidence 776443210 01 455677888888874 55533211 013567777778777655655 444 38832
Q ss_pred cc-CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCc-ccHHHHHHHHHhc
Q 007056 256 IT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN-ASLEEVVMAFKCR 333 (620)
Q Consensus 256 ~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGN-a~lEevv~~L~~~ 333 (620)
.. ......+.++.+.. -...+|++|..+-. +-+..+ ..+|+ |+ .+...++..|...
T Consensus 167 ~~~~~~d~~~~~~~~~~-------~i~~vHlkD~~~~~----------~~~~~~---~~~G~--G~~id~~~~~~~L~~~ 224 (264)
T 1yx1_A 167 WRWQEQAADEAALRLGR-------YVGYVHCKAVIRNR----------DGKLVA---VPPSA--ADLQYWQRLLQHFPEG 224 (264)
T ss_dssp GGGGTCCHHHHHHHHGG-------GEEEEEECEEEECT----------TSCEEE---ECCCH--HHHHHHHHHHTTSCTT
T ss_pred hhhcCCCHHHHHHHhhh-------hEEEEEeecccCCC----------CCceee---ECCCC--CCccCHHHHHHHhhcC
Confidence 21 11222334443332 24688888865420 111111 13443 78 8888888887753
No 111
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=89.77 E-value=17 Score=35.94 Aligned_cols=180 Identities=19% Similarity=0.161 Sum_probs=106.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHH-HHHHHhcccccccCCccceEEeecc--cch----hhHHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVR-TIAKEVGNAVDAESGYVPVICGLSR--CNE----RDIKTA 165 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~-~i~~~~~~~~~~~~~l~~~i~~~~r--~~~----~dI~~a 165 (620)
...+.++..++.+...+.|++.+-+ +| .-. .++ .+.... .+ .+..+.+|-. ... ..++.|
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv-~p----~~v-~a~~~l~~~~--~v-----~v~tvigFP~G~~~~~~k~~e~~~A 97 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVL-TP----VYT-VKISGLAEKL--GV-----KLCSVIGFPLGQAPLEVKLVEAQTV 97 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-CH----HHH-HHHHHHHHHH--TC-----CEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE-ch----HHh-eeehHhCCCC--Cc-----eEEEEeCCCCCCCcHHHHHHHHHHH
Confidence 4468999999999999999999987 33 322 222 222210 10 1122233311 111 233444
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
++. |.+.|.+++...... +++++.+...++.+.+.|.. +-+-.|... .+.+.+...++.+.++||
T Consensus 98 v~~----GAdEID~vinig~~~---------~~v~~ei~~v~~a~~~~g~~-lKvIlEt~~-L~~e~i~~a~ria~eaGA 162 (234)
T 1n7k_A 98 LEA----GATELDVVPHLSLGP---------EAVYREVSGIVKLAKSYGAV-VKVILEAPL-WDDKTLSLLVDSSRRAGA 162 (234)
T ss_dssp HHH----TCCEEEECCCGGGCH---------HHHHHHHHHHHHHHHHTTCE-EEEECCGGG-SCHHHHHHHHHHHHHTTC
T ss_pred HHc----CCCEEEEeccchHHH---------HHHHHHHHHHHHHHhhcCCe-EEEEEeccC-CCHHHHHHHHHHHHHhCC
Confidence 443 899998887654322 27788888888888887753 433333332 346889999999999999
Q ss_pred cEEeecCCc---cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 246 TTLNIPDTV---GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 246 ~~I~L~DTv---G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
|.|--.-.. |.++|+.+.- +.+++.+. . .+.++==.++ ...+++-+++||++|=+
T Consensus 163 DfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v-~VKaaGGirt-----~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 163 DIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-M-GVKASGGIRS-----GIDAVLAVGAGADIIGT 220 (234)
T ss_dssp SEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-C-EEEEESSCCS-----HHHHHHHHHTTCSEEEE
T ss_pred CEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-C-CEEEecCCCC-----HHHHHHHHHcCccccch
Confidence 998876321 4556766443 11333332 1 2333322232 46777778999997633
No 112
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.76 E-value=1.1 Score=46.09 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++-|.++=|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++.-+..|-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchHHHHHHHHHHHH
Confidence 3578999999999999999999999999999 46899999999999887655 4677777 5899999999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
++||+.+=..-==.+-. --.+-++++..++
T Consensus 101 ~~Gadavlv~~Pyy~~~-~~~s~~~l~~~f~ 130 (309)
T 3fkr_A 101 QLGAAMVMAMPPYHGAT-FRVPEAQIFEFYA 130 (309)
T ss_dssp HTTCSEEEECCSCBTTT-BCCCHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCccC-CCCCHHHHHHHHH
Confidence 99999986653221100 0134566665544
No 113
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=89.73 E-value=1.3 Score=45.08 Aligned_cols=98 Identities=18% Similarity=0.122 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHHHhc
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGACAG 303 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~aG 303 (620)
.|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-++|
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988 56899999999999887655 3455444 4788889999999999999
Q ss_pred CcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 304 ARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 304 A~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
|+.+=..---+- + .+-++++..++
T Consensus 97 adavlv~~P~y~-~---~s~~~l~~~f~ 120 (291)
T 3a5f_A 97 VDGLLVITPYYN-K---TTQKGLVKHFK 120 (291)
T ss_dssp CSEEEEECCCSS-C---CCHHHHHHHC-
T ss_pred CCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 999866543332 1 24455555444
No 114
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.71 E-value=6.6 Score=40.27 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=85.6
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEcC---CCCCCCCH-HHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSP---EDAGRSDR-KFL 233 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~-V~f~~---ed~~r~d~-e~l 233 (620)
..++.+++. |++.|.+.+-. ++ .+..+.++.+.++++.+++.|+.. +...+ .-....++ +.+
T Consensus 112 ~~ve~a~~~----GAdaV~vlv~~~~d--------~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v 179 (304)
T 1to3_A 112 INAQAVKRD----GAKALKLLVLWRSD--------EDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAI 179 (304)
T ss_dssp CCHHHHHHT----TCCEEEEEEEECTT--------SCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHH
T ss_pred hhHHHHHHc----CCCEEEEEEEcCCC--------ccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHH
Confidence 345655554 88877654321 21 124678899999999999999852 22211 11112455 888
Q ss_pred HHHHHHHHHcCCcEEeecCC-ccccCHHHHHHHHHHHHHhCCCCCcee-EEEecCCCcchHHHHHHHHHHhcCcEEe
Q 007056 234 YEILGEVIKVGATTLNIPDT-VGITMPTEFGKLIADIKANTPGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DT-vG~~~P~~v~~li~~l~~~~~~~~~v~-i~~H~HND~GlAvANslaAv~aGA~~Vd 308 (620)
.+.++.+.+.|||.|.+.=+ .|...|+++.++++......+ +| |.+=.=.+.-.-..|.-.|+++||+.|-
T Consensus 180 ~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~----~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~ 252 (304)
T 1to3_A 180 IDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN----MPWVILSSGVDEKLFPRAVRVAMEAGASGFL 252 (304)
T ss_dssp HHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC----SCEEECCTTSCTTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC----CCeEEEecCCCHHHHHHHHHHHHHcCCeEEE
Confidence 88899999999999877653 243488899998888665443 33 3222222444456788888999997763
No 115
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=89.67 E-value=2.6 Score=41.85 Aligned_cols=163 Identities=21% Similarity=0.169 Sum_probs=108.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcc----cccccCCc--------cceEEeecc-----
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGN----AVDAESGY--------VPVICGLSR----- 156 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~----~~~~~~~l--------~~~i~~~~r----- 156 (620)
.-|.|+-++-.+...+.....+-+|--+-.|..|..+-.|+.+... .+....++ -..+-+|.+
T Consensus 69 y~tve~AV~~mk~y~~~~~~avSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~~~~T~VNaLVSPTG~~ 148 (275)
T 3m6y_A 69 YPTVEEAVTAMKAYGKEIDDAVSIGLGAGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLGEKDSWINSLVSPTGKV 148 (275)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCEEEECCTTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHTTCCCEEEEEEBCCSST
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcCCCccEEEEEEcCCCCc
Confidence 4568888999999988888789999877778888888887764311 10000000 001111111
Q ss_pred ------------cc----hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Q 007056 157 ------------CN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 220 (620)
Q Consensus 157 ------------~~----~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f 220 (620)
+. .-.++.|+..+++.|.+.|.+|-=--. +. ++.++.+++.|.+.|+ .+
T Consensus 149 G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffPM~Gl--------~~----leEl~avAkAca~~g~---~l 213 (275)
T 3m6y_A 149 GYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFPMKGL--------AH----EEEYRAVAKACAEEGF---AL 213 (275)
T ss_dssp TEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECCCTTT--------TT----HHHHHHHHHHHHHHTC---EE
T ss_pred ceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEeecCCc--------cc----HHHHHHHHHHHHHcCc---eE
Confidence 11 124788999999999999988731111 23 3445556666666776 23
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEe-------ecCCccccCHHHHHHHHHHHHHhC
Q 007056 221 SPEDAGRSDRKFLYEILGEVIKVGATTLN-------IPDTVGITMPTEFGKLIADIKANT 273 (620)
Q Consensus 221 ~~ed~~r~d~e~l~~~~~~~~~aGa~~I~-------L~DTvG~~~P~~v~~li~~l~~~~ 273 (620)
-| .+..|.+.+.++++.+.++|+..|. |=-..|...|+++.+++..+++-+
T Consensus 214 EP--TGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~ 271 (275)
T 3m6y_A 214 EP--TGGIDKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLV 271 (275)
T ss_dssp EE--BSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred CC--CCCccHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHH
Confidence 34 6678889999999999999986431 224689999999999999998765
No 116
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.62 E-value=1.4 Score=45.79 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=81.3
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-++ ++|+.--++..
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~l 121 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRTDEAVAL 121 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSHHHHHHH
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 4433 3589999999999999999999999999998 56899999999999987765 3555544 47888889999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.|=..---+- + .+-++++..++
T Consensus 122 a~~A~~~Gadavlv~~P~Y~-~---~s~~~l~~~f~ 153 (332)
T 2r8w_A 122 AKDAEAAGADALLLAPVSYT-P---LTQEEAYHHFA 153 (332)
T ss_dssp HHHHHHHTCSEEEECCCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999999999866543332 2 34466665544
No 117
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=89.52 E-value=18 Score=36.57 Aligned_cols=195 Identities=13% Similarity=0.101 Sum_probs=116.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 91 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-------KRVPVIAGTGTNDTEKSIQASI 91 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHHH
Confidence 467788889999999999998876 3 355566665 44455555432 3357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~aG 244 (620)
....+|++.+-+..|-. ++.+.++.++-..+..+.. ++.-+-|+.. .+...+++.+.++++ .
T Consensus 92 -~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~----~- 155 (292)
T 3daq_A 92 -QAKALGADAIMLITPYY-------NKTNQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMTIEPETVEILSQ----H- 155 (292)
T ss_dssp -HHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCCCCHHHHHHHHT----S-
T ss_pred -HHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEecccccCCCCCHHHHHHHhc----C-
Confidence 33456999887766632 2346666666555544433 4554566543 344566777666543 2
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++ ++..++. +..+ +-++++ ..+.++..|++.+ +.| .+|..-+
T Consensus 156 pnivgiK~ssgd--~~~~~~~----~~~~~~~-~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P~ 214 (292)
T 3daq_A 156 PYIVALKDATND--FEYLEEV----KKRIDTN-SFAL-YSGNDD------NVVEYYQRGGQGV---ISV----IANVIPK 214 (292)
T ss_dssp TTEEEEEECCCC--HHHHHHH----HTTSCTT-TSEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHH----HHHCCCC-CEEE-EECCHH------HHHHHHhcCCCEE---EeC----HHHhhHH
Confidence 579999999984 3444443 4444421 1222 233332 2566788898643 443 4677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 215 ~~~~l~~a 222 (292)
T 3daq_A 215 EFQALYDA 222 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665553
No 118
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=89.45 E-value=1.6 Score=45.89 Aligned_cols=148 Identities=17% Similarity=0.207 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE--------------------EEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe
Q 007056 94 TLTSKEKLDIARQLAKLGVDII--------------------EAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 153 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~I--------------------EvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 153 (620)
.|+.++=..+.+.-.+.|+..+ -+|+. .-+++..++.+++. + .|.|..
T Consensus 87 ~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~--~~~n~~LL~~va~~-g---------kPviLs 154 (349)
T 2wqp_A 87 ALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSG--ECNNYPLIKLVASF-G---------KPIILS 154 (349)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGG--GTTCHHHHHHHHTT-C---------SCEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcc--cccCHHHHHHHHhc-C---------CeEEEE
Confidence 3566666666665555555544 44332 22345666666652 1 267777
Q ss_pred ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEcCCCCCCCCHH
Q 007056 154 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRK 231 (620)
Q Consensus 154 ~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~~ed~~r~d~e 231 (620)
-+.+..++|+.|++.+...|.+ |.+.-.+|. +-.++++ ++ ..++..+|+. ++. |-|+-=..+
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~-iiLlhc~s~------Yp~~~~~-~n--L~ai~~lk~~f~~lp-Vg~sdHt~G----- 218 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVP-YALLHCTNI------YPTPYED-VR--LGGMNDLSEAFPDAI-IGLSDHTLD----- 218 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCC-EEEEECCCC------SSCCGGG-CC--THHHHHHHHHCTTSE-EEEECCSSS-----
T ss_pred CCCCCHHHHHHHHHHHHHcCCC-EEEEeccCC------CCCChhh-cC--HHHHHHHHHHCCCCC-EEeCCCCCc-----
Confidence 7778889999999888776764 333212221 1112221 11 1345555554 454 666321111
Q ss_pred HHHHHHHHHHHcCCcEEe--------e--cCCccccCHHHHHHHHHHHHH
Q 007056 232 FLYEILGEVIKVGATTLN--------I--PDTVGITMPTEFGKLIADIKA 271 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~--------L--~DTvG~~~P~~v~~li~~l~~ 271 (620)
..+..+++.+||+.|- + +|--=.++|+++.++++.++.
T Consensus 219 --~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~ 266 (349)
T 2wqp_A 219 --NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHA 266 (349)
T ss_dssp --SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHH
Confidence 5677888899998653 4 788888999999999999886
No 119
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.40 E-value=14 Score=38.00 Aligned_cols=195 Identities=11% Similarity=0.126 Sum_probs=118.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~~ai~la- 110 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-------KRVPVVAGAGSNSTSEAVELA- 110 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHH-
Confidence 478888899999999999999875 3 355556665 34455555432 3357888887655444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. .+.+.++.++-.....+. .++.-+-|+... +...+++.+.++++. .
T Consensus 111 ~~A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 176 (315)
T 3si9_A 111 KHAEKAGADAVLVVTPYY-------NRPNQRGLYTHFSSIAKA---ISIPIIIYNIPSRSVIDMAVETMRDLCRD---F- 176 (315)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHc---CCCCEEEEeCchhhCCCCCHHHHHHHHhh---C-
Confidence 334567999987766632 244666665554444333 355545665432 345567766555431 3
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++.. ++ +..+ +-+.+++ .+.++..|++.+ +.| ++|..-+
T Consensus 177 pnIvgiKdssgd--~~~~~~l~~~~----~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 234 (315)
T 3si9_A 177 KNIIGVKDATGK--IERASEQREKC----GK--DFVQ-LSGDDCT------ALGFNAHGGVGC---ISV----SSNVAPK 234 (315)
T ss_dssp TTEEEEEECSCC--THHHHHHHHHH----CS--SSEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHHc----CC--CeEE-EecCHHH------HHHHHHcCCCEE---Eec----HHHhhHH
Confidence 478999999885 35566665543 22 2223 3344332 466788898643 433 4677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 235 ~~~~l~~a 242 (315)
T 3si9_A 235 LCAQLHAA 242 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76655553
No 120
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.35 E-value=1.8 Score=44.13 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=79.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccHHHHHHHHHHHH
Confidence 35789999999999999999999999999985 7899999999999988765 3555444 5788889999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
++||+.+=..---+- + +.+-++++..++
T Consensus 96 ~~Gadavlv~~P~y~-~--~~s~~~l~~~f~ 123 (294)
T 3b4u_A 96 NAGARNILLAPPSYF-K--NVSDDGLFAWFS 123 (294)
T ss_dssp HTTCSEEEECCCCSS-C--SCCHHHHHHHHH
T ss_pred hcCCCEEEEcCCcCC-C--CCCHHHHHHHHH
Confidence 999999866544332 2 134556554443
No 121
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=89.33 E-value=1.2 Score=45.56 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHHHh
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACA 302 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv~a 302 (620)
..|.+-+.++++.+++.|++-|.++=|+|= ++.+|-.++++.+.+...+ +++|-+|+ +|+.--++..+..|-++
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK--RVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 789999999999999999999999999985 5789999999999887655 46777776 79999999999999999
Q ss_pred cCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 303 GARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 303 GA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
||+.+=..---+-. .+-++++..++.
T Consensus 97 Gadavlv~~P~y~~----~~~~~l~~~f~~ 122 (292)
T 3daq_A 97 GADAIMLITPYYNK----TNQRGLVKHFEA 122 (292)
T ss_dssp TCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 99998665433322 345666655543
No 122
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=89.30 E-value=18 Score=36.60 Aligned_cols=194 Identities=13% Similarity=0.093 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 89 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-------GRVPVIAGAGSNSTAEAIAFVR 89 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHHH
Confidence 367788889999999999999876 4 455666665 44455555432 2357888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.++++. .
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 154 (292)
T 2vc6_A 90 H-AQNAGADGVLIVSPYY-------NKPTQEGIYQHFKAIDA---ASTIPIIVYNIPGRSAIEIHVETLARIFED---C- 154 (292)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred H-HHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHhh---C-
Confidence 3 3567999887766632 23466666665554433 3345545665432 335677777776531 3
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++ ..++ +..+ +-+++++ .+.++..|++.+ +.| .+|...+
T Consensus 155 pnIvgiK~s~gd--~~~~~~~~~----~~~~--~f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2vc6_A 155 PNVKGVXDATGN--LLRPSLERM----ACGE--DFNL-LTGEDGT------ALGYMAHGGHGC---ISV----TANVAPA 212 (292)
T ss_dssp TTEEEEEECSCC--THHHHHHHH----HSCT--TSEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCC--HHHHHHHHH----HcCC--CEEE-EECchHH------HHHHHHcCCCEE---Eec----HHHhCHH
Confidence 579999999984 344555443 3442 2333 3344432 456778898642 333 4677777
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 213 ~~~~l~~ 219 (292)
T 2vc6_A 213 LCADFQQ 219 (292)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 123
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=89.27 E-value=17 Score=35.43 Aligned_cols=199 Identities=14% Similarity=0.062 Sum_probs=104.4
Q ss_pred HHHHHHhHcCCCEEEEec--C------CCChhHHHHHHHHHHHhcccccccCCccceEEee-------cccc-------h
Q 007056 102 DIARQLAKLGVDIIEAGF--P------AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-------SRCN-------E 159 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGf--P------~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-------~r~~-------~ 159 (620)
+.++.+.++|++.||+.. | ..++.+.+.++++.+..+-.+ ..++.+ +... .
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~h~~~~~~~~~~~~~~r~~~~ 88 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW-------ENAFCHSGYLINLASPKDDIWQKSV 88 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG-------GGEEEECCTTCCTTCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc-------ceeEEecccccccCCCCHHHHHHHH
Confidence 345666788999999932 1 123345666666655432211 012221 1111 1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCEEEEcCCCCC----CCCHHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAG----RSDRKFL 233 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~--~G~~~V~f~~ed~~----r~d~e~l 233 (620)
+.++.+++.....|.+.|.+..... .+.+.++.++.+.+.++.+-+ .|+. +.+-+.... -.+++.+
T Consensus 89 ~~~~~~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv~-l~lEn~~~~~~~~~~~~~~~ 160 (287)
T 2x7v_A 89 ELLKKEVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGVV-ILLENVSQKGGNIGYKLEQL 160 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSCE-EEEECCCCCTTEECSSHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCCE-EEEeCCCCCCCccCCCHHHH
Confidence 2344455555556888876643321 123567777777777766543 3543 444222111 1367777
Q ss_pred HHHHHHHHHcCC-cEEeec-CC-----ccc--cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcC
Q 007056 234 YEILGEVIKVGA-TTLNIP-DT-----VGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGA 304 (620)
Q Consensus 234 ~~~~~~~~~aGa-~~I~L~-DT-----vG~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA 304 (620)
.++++.+ +- +.+.++ || .|. ..|+.+.++++.+.+.++. +-...+|.||..+- .|.
T Consensus 161 ~~l~~~~---~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~--~~i~~vH~~D~~~~----------~~~ 225 (287)
T 2x7v_A 161 KKIRDLV---DQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGL--ERLKMIHLNDSKYP----------LGA 225 (287)
T ss_dssp HHHHHHC---SCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTC
T ss_pred HHHHHhc---CCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCc--cceeEEEEecCCCc----------cCC
Confidence 7776654 32 333333 54 222 2345677777777655430 13568899986541 011
Q ss_pred cEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 305 RQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 305 ~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
. -+- -..+|+ |..+...++..|+..+
T Consensus 226 ~-~~~-~~~~G~--G~id~~~~~~~L~~~g 251 (287)
T 2x7v_A 226 A-KDR-HERIGS--GFIGEEGFAVFFSFKE 251 (287)
T ss_dssp C-CCC-EECTTS--SSSHHHHHHHHHTCHH
T ss_pred c-ccc-cCCCCC--CCcCHHHHHHHHhccC
Confidence 1 010 112444 8899999999998654
No 124
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.25 E-value=17 Score=37.05 Aligned_cols=194 Identities=12% Similarity=0.133 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 92 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-------RRVPVVAGVASTSVADAVAQA- 92 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCBEEEEEESSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHH-
Confidence 478888899999999999998754 3 355556665 44555555432 3357888887655444 4443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--GRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~--~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+.... ...+++.+.++ .+.
T Consensus 93 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~L----a~~- 157 (300)
T 3eb2_A 93 KLYEKLGADGILAILEAY-------FPLKDAQIESYFRAIADA---VEIPVVIYTNPQFQRSDLTLDVIARL----AEH- 157 (300)
T ss_dssp HHHHHHTCSEEEEEECCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECTTTCSSCCCHHHHHHH----HTS-
T ss_pred HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHH---CCCCEEEEECccccCCCCCHHHHHHH----HcC-
Confidence 333456999987776642 245667666555444333 3455466754432 34456655554 233
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++.....+ .+ +-+++++ .+.++..|++. .+.| .+|..-+
T Consensus 158 pnIvgiKdssgd--~~~~~~~~~~~~~~f------~v-~~G~d~~------~~~~l~~G~~G---~is~----~an~~P~ 215 (300)
T 3eb2_A 158 PRIRYIKDASTN--TGRLLSIINRCGDAL------QV-FSASAHI------PAAVMLIGGVG---WMAG----PACIAPR 215 (300)
T ss_dssp TTEEEEEECSSB--HHHHHHHHHHHGGGS------EE-EECTTSC------HHHHHHTTCCE---EEEG----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHHcCCCe------EE-EeCcHHH------HHHHHhCCCCE---EEeC----hhhhhHH
Confidence 578999999884 456666666544332 22 2344442 35677889764 3443 4677666
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 216 ~~~~l~~a 223 (300)
T 3eb2_A 216 QSVALYEL 223 (300)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 125
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=89.25 E-value=1.6 Score=44.59 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 126 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 126 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
.++.++++++. + .|.+.--+. +..+++..+++.+...|.+.|.+.--.+.. +... ..++ .
T Consensus 123 n~~LLr~va~~-g---------kPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y------~~~~-~~vd--l 183 (285)
T 3sz8_A 123 QTDLVVAIAKA-G---------KPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSF------GYDN-LVVD--M 183 (285)
T ss_dssp CHHHHHHHHHT-S---------SCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEEC------SSSC-EECC--T
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCC------CCCc-CccC--H
Confidence 34567776652 1 145544444 478899999999888888777665322211 1100 0001 1
Q ss_pred HHHHHHHHc--CCCEEEEcCCCC----------CCCCHHHHHHHHHHHHHcCCcE--E--------eecCCccccCHHHH
Q 007056 205 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATT--L--------NIPDTVGITMPTEF 262 (620)
Q Consensus 205 ~~v~~a~~~--G~~~V~f~~ed~----------~r~d~e~l~~~~~~~~~aGa~~--I--------~L~DTvG~~~P~~v 262 (620)
.++...|+. |+. |.|++--+ +--..+++..+..+++.+||+- | .++|--=.++|+++
T Consensus 184 ~~i~~lk~~~~~~p-V~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el 262 (285)
T 3sz8_A 184 LGFRQMAETTGGCP-VIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQL 262 (285)
T ss_dssp THHHHHHHHTTSCC-EEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGH
T ss_pred HHHHHHHHhCCCCC-EEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHH
Confidence 234445555 776 88855222 1235689999999999999983 3 45788889999999
Q ss_pred HHHHHHHHHh
Q 007056 263 GKLIADIKAN 272 (620)
Q Consensus 263 ~~li~~l~~~ 272 (620)
.++++.+++-
T Consensus 263 ~~lv~~i~~i 272 (285)
T 3sz8_A 263 EGLLSQMKAI 272 (285)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998863
No 126
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=89.17 E-value=1.7 Score=45.88 Aligned_cols=107 Identities=19% Similarity=0.165 Sum_probs=84.4
Q ss_pred EcCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHH
Q 007056 220 FSPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTA 294 (620)
Q Consensus 220 f~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvA 294 (620)
+.|.+ .+..|.+-+.++++.+++.|++-|.++=|+| .++++|-.++++.+.+...+ +++|-+++ +|+.--++.
T Consensus 68 vTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~ 145 (360)
T 4dpp_A 68 KTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNTGSNSTREAIH 145 (360)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSHHHHHH
T ss_pred eCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCHHHHHH
Confidence 35543 4579999999999999999999999999999 56899999999999887765 46666665 689999999
Q ss_pred HHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 295 NTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 295 NslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
.+..|-++||+.+=..---+ -+ .+-++++..++.
T Consensus 146 la~~A~~~Gadavlvv~PyY-~k---~sq~gl~~hf~~ 179 (360)
T 4dpp_A 146 ATEQGFAVGMHAALHINPYY-GK---TSIEGLIAHFQS 179 (360)
T ss_dssp HHHHHHHTTCSEEEEECCCS-SC---CCHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCC-CC---CCHHHHHHHHHH
Confidence 99999999999986543322 22 456777766654
No 127
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.01 E-value=1.9 Score=44.23 Aligned_cols=105 Identities=21% Similarity=0.210 Sum_probs=81.1
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++=|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++..
T Consensus 26 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~st~~ai~l 103 (304)
T 3cpr_A 26 TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTNNTRTSVEL 103 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCCCHHHHHHH
Confidence 4542 3578999999999999999999999999988 56899999999999887665 3555554 47888999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=..---+- + .+-++++..++
T Consensus 104 a~~A~~~Gadavlv~~P~y~-~---~~~~~l~~~f~ 135 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYS-K---PSQEGLLAHFG 135 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999999999866544332 1 24566665544
No 128
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.98 E-value=5.6 Score=40.81 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 262 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v 262 (620)
.|.+|++..+...++- .... |..+.+.++ -+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 66 vt~~em~~~~~~I~r~---~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~ 140 (298)
T 3eoo_A 66 STMDDVLVDANRITNA---TNLP-LLVDIDTGW-GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEM 140 (298)
T ss_dssp CCHHHHHHHHHHHHHH---CCSC-EEEECTTCS-SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhh---cCCe-EEEECCCCC-CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 4688888777665543 3444 788886654 4899999999999999999999999986 3345666
Q ss_pred HHHHHHHHHhCCCCCceeEEEecCCC----cchHHHHHHHHHHhcCcEE
Q 007056 263 GKLIADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQV 307 (620)
Q Consensus 263 ~~li~~l~~~~~~~~~v~i~~H~HND----~GlAvANslaAv~aGA~~V 307 (620)
.+.|+..++.-.+. +..|-.-+-.- +--++.=+.+..+||||.|
T Consensus 141 ~~ri~Aa~~A~~~~-~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 141 VDRIKAAVDARTDE-TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMI 188 (298)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccCC-CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEE
Confidence 77777666654222 23333333221 2225666777788888876
No 129
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.96 E-value=14 Score=37.94 Aligned_cols=194 Identities=17% Similarity=0.148 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+-.+.++ |+.+
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~~t~~ai~la- 112 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA-------HRVPTIVSVSDLTTAKTVRRA- 112 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHH-
Confidence 478888999999999999998876 3 355566665 44455555432 2357888887655444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+.. .+...+++.+.+++ .+.
T Consensus 113 ~~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~L~---a~~- 178 (315)
T 3na8_A 113 QFAESLGAEAVMVLPISY-------WKLNEAEVFQHYRAVGEA---IGVPVMLYNNPGTSGIDMSVELILRIV---REV- 178 (315)
T ss_dssp HHHHHTTCSEEEECCCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH---HHS-
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCcEEEEeCcchhCcCCCHHHHHHHH---hcC-
Confidence 334567999987766642 245666666655544433 34554566543 23445666665553 233
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++. .++ +..+ +-+.+++ .+.++..|++.+ +.| .+|..-+
T Consensus 179 pnIvgiKdssgd--~~~~~~~~~~----~~~--~f~v-~~G~D~~------~l~~l~~G~~G~---is~----~an~~P~ 236 (315)
T 3na8_A 179 DNVTMVKESTGD--IQRMHKLRLL----GEG--RVPF-YNGCNPL------ALEAFVAGAKGW---CSA----APNLIPT 236 (315)
T ss_dssp TTEEEEEECSSC--HHHHHHHHHH----TTT--CSCE-EECCGGG------HHHHHHHTCSEE---EES----GGGTCHH
T ss_pred CCEEEEECCCCC--HHHHHHHHHH----cCC--CEEE-EeCchHH------HHHHHHCCCCEE---Eec----hhhhCHH
Confidence 478999999883 4555555543 332 1222 2234332 467778897643 433 4677666
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 237 ~~~~l~~ 243 (315)
T 3na8_A 237 LNGQLYQ 243 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 130
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.85 E-value=1.3 Score=45.62 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=81.7
Q ss_pred cCCC--CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHH
Q 007056 221 SPED--AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed--~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+++-++.--++..
T Consensus 21 TPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g--rvpViaGvg~~t~~ai~l 98 (316)
T 3e96_A 21 TPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG--RALVVAGIGYATSTAIEL 98 (316)
T ss_dssp CCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHHH
T ss_pred CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEEeCcCHHHHHHH
Confidence 5554 36899999999999999999999999999985 5899999999999887765 466666654588888889
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
+..|-++||+.+=...--+ - ..+-++++..++.
T Consensus 99 a~~A~~~Gadavlv~~P~y-~---~~s~~~l~~~f~~ 131 (316)
T 3e96_A 99 GNAAKAAGADAVMIHMPIH-P---YVTAGGVYAYFRD 131 (316)
T ss_dssp HHHHHHHTCSEEEECCCCC-S---CCCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCC-C---CCCHHHHHHHHHH
Confidence 9999999999986542222 1 2356666655543
No 131
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=88.75 E-value=3.5 Score=40.43 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=98.7
Q ss_pred HHHHHHHhHcCCCEEEEecCCC---------ChhHHHHHHHHHHHhcccccccCCccceEEeeccc------ch------
Q 007056 101 LDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC------NE------ 159 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGfP~~---------s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~------~~------ 159 (620)
.+.++.+.++|++.||+ |+.. ++.+.+.++.+.+.. ++ ..+++++.. .+
T Consensus 17 ~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------gl-~~~~~h~~~~~~l~s~~~~r~~~ 86 (270)
T 3aam_A 17 AGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREAS--------GG-LPAVIHASYLVNLGAEGELWEKS 86 (270)
T ss_dssp HHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHT--------TC-CCEEEECCTTCCTTCSSTHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHc--------CC-ceEEEecCcccCCCCCHHHHHHH
Confidence 44556667789999999 5421 234555666655542 22 012221110 11
Q ss_pred -hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCEEEEcCC--CCC--CCCHHHH
Q 007056 160 -RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEFSPE--DAG--RSDRKFL 233 (620)
Q Consensus 160 -~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~-~~G~~~V~f~~e--d~~--r~d~e~l 233 (620)
+.++.+++.....|.+.|.+..... +.+..++.+.+++++|+ +.|+. +.+-+. ..+ -.+++.+
T Consensus 87 ~~~~~~~i~~a~~lGa~~vv~h~g~~----------~~~~~~~~l~~l~~~a~~~~gv~-l~lEn~~~~~~~~~~~~~~~ 155 (270)
T 3aam_A 87 VASLADDLEKAALLGVEYVVVHPGSG----------RPERVKEGALKALRLAGVRSRPV-LLVENTAGGGEKVGARFEEL 155 (270)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBS----------CHHHHHHHHHHHHHHHTCCSSSE-EEEECCCCCTTBSCCSHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC----------CHHHHHHHHHHHHHhhcccCCCE-EEEecCCCCCCccCCCHHHH
Confidence 1223344444445777775543321 11566777778888887 77763 555222 111 2378888
Q ss_pred HHHHHHHHHcCCcEEeecCCc-----cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEe
Q 007056 234 YEILGEVIKVGATTLNIPDTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTv-----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 308 (620)
.++++.+ ..| + .-||. |.-....+.+.++.+.+.++. +-...+|.||..+- .|.. .|
T Consensus 156 ~~l~~~v-~vg---~-~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~-~d 217 (270)
T 3aam_A 156 AWLVADT-PLQ---V-CLDTCHAYAAGYDVAEDPLGVLDALDRAVGL--ERVPVVHLNDSVGG----------LGSR-VD 217 (270)
T ss_dssp HHHHTTS-SCE---E-EEEHHHHHHHTCCTTTCHHHHHHHHHHHTCG--GGCCEEECCEESSC----------TTCC-CC
T ss_pred HHHHHhC-CEE---E-EEehhhHHhccCCchhhHHHHHHHHHHhcCc--cceeEEEEecCCCc----------cccC-cc
Confidence 8888776 222 1 12443 322111245555555443320 12358899886541 0111 00
Q ss_pred eccccccCCcCcccHHHHHHHHHhcc
Q 007056 309 VTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 309 ~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
.-..+|+ |+.+ +.++..|+..+
T Consensus 218 -~h~~~G~--G~id-~~~~~~L~~~~ 239 (270)
T 3aam_A 218 -HHAHLLQ--GKIG-EGLKRVFLDPR 239 (270)
T ss_dssp -CEECTTS--SSST-THHHHHHTCGG
T ss_pred -cccCCCC--CCcC-HHHHHHHhccC
Confidence 0012454 8899 99999998754
No 132
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.74 E-value=1.8 Score=44.05 Aligned_cols=100 Identities=18% Similarity=0.103 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 301 (620)
+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 4789999999999999999999999999884 6899999999999887665 3566555 47888899999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (289)
T 2yxg_A 94 VGADAVLSITPYYN-K---PTQEGLRKHFG 119 (289)
T ss_dssp HTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred cCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999866543332 2 24456655444
No 133
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=88.71 E-value=8.4 Score=39.41 Aligned_cols=122 Identities=13% Similarity=0.094 Sum_probs=77.1
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCC-CCCCCHHHHHHHHHH
Q 007056 162 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED-AGRSDRKFLYEILGE 239 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed-~~r~d~e~l~~~~~~ 239 (620)
++.+++ .|++.|.+.+-..+ ....+.++.+.++++.+++.|+. +.. ++.. .-..|++.+...++.
T Consensus 131 ve~Av~----~GAdaV~~~i~~Gs--------~~~~~~l~~i~~v~~~a~~~Glp-vIie~~~G~~~~~d~e~i~~aari 197 (295)
T 3glc_A 131 MDDAVR----LNSCAVAAQVYIGS--------EYEHQSIKNIIQLVDAGMKVGMP-TMAVTGVGKDMVRDQRYFSLATRI 197 (295)
T ss_dssp HHHHHH----TTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHTTTCC-EEEEECC----CCSHHHHHHHHHH
T ss_pred HHHHHH----CCCCEEEEEEECCC--------CcHHHHHHHHHHHHHHHHHcCCE-EEEECCCCCccCCCHHHHHHHHHH
Confidence 455554 48887766543321 23467888999999999999986 333 2210 002577888889999
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+.++|||.|-.+=| ++.+ +.+.+..+ .+ +.+.==.+-+.--.+.+...|+++||+.+
T Consensus 198 A~elGAD~VKt~~t-----~e~~----~~vv~~~~-vP-Vv~~GG~~~~~~~~l~~v~~ai~aGA~Gv 254 (295)
T 3glc_A 198 AAEMGAQIIKTYYV-----EKGF----ERIVAGCP-VP-IVIAGGKKLPEREALEMCWQAIDQGASGV 254 (295)
T ss_dssp HHHTTCSEEEEECC-----TTTH----HHHHHTCS-SC-EEEECCSCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHhCCCEEEeCCC-----HHHH----HHHHHhCC-Cc-EEEEECCCCCHHHHHHHHHHHHHhCCeEE
Confidence 99999999998744 2333 44454432 11 32222223234456788899999999865
No 134
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=88.69 E-value=5.2 Score=42.52 Aligned_cols=176 Identities=14% Similarity=0.142 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec--CCCChh--------HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHH
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGF--PAASKE--------DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 165 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~~--------d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 165 (620)
+.+.-+++++.+.++|.+.|=.+. |..+|. .+..++.++++. |+ +.++- --....++..
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--------Gl-~~~te--~~d~~~~~~l 222 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--------GL-GVISE--IVTPADIEVA 222 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEEE--CCSGGGHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--------CC-EEEEe--cCCHHHHHHH
Confidence 899999999999999999998774 444432 233344444432 22 22221 1233444433
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
... ++.+.|- +.+.. + .+.++++.+.|.. |.++- +...+++.+...++.+.+.|.
T Consensus 223 ----~~~-vd~lkIg--s~~~~-----------n----~~LL~~~a~~gkP-Vilk~--G~~~t~~e~~~Ave~i~~~Gn 277 (385)
T 3nvt_A 223 ----LDY-VDVIQIG--ARNMQ-----------N----FELLKAAGRVDKP-ILLKR--GLSATIEEFIGAAEYIMSQGN 277 (385)
T ss_dssp ----TTT-CSEEEEC--GGGTT-----------C----HHHHHHHHTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTTTC
T ss_pred ----Hhh-CCEEEEC--ccccc-----------C----HHHHHHHHccCCc-EEEec--CCCCCHHHHHHHHHHHHHcCC
Confidence 233 6676653 22211 1 1556667778875 87753 334788888888998988998
Q ss_pred cEEeecCC--ccccC-H-HHHH-HHHHHHHHhCCCCCceeEEEecCC--CcchHHHHHHHHHHhcCc--EEeec
Q 007056 246 TTLNIPDT--VGITM-P-TEFG-KLIADIKANTPGIENVVISTHCQN--DLGLSTANTIAGACAGAR--QVEVT 310 (620)
Q Consensus 246 ~~I~L~DT--vG~~~-P-~~v~-~li~~l~~~~~~~~~v~i~~H~HN--D~GlAvANslaAv~aGA~--~Vd~T 310 (620)
..|.||.- ..+-+ | +.+- ..|..+++.+. .+ + ++=|.|. +..+-..-+++|+.+||+ .|+.=
T Consensus 278 ~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~-lp-V-~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 278 GKIILCERGIRTYEKATRNTLDISAVPILKKETH-LP-V-MVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS-SC-E-EEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred CeEEEEECCCCCCCCCCccccCHHHHHHHHHhcC-CC-E-EEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 87888774 33322 2 2221 12556776542 11 4 5667774 345556779999999999 77663
No 135
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=88.67 E-value=1.4 Score=44.96 Aligned_cols=82 Identities=17% Similarity=0.155 Sum_probs=54.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--Cc-c---ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--TV-G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~D--Tv-G---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
|+++. +++.+.+.++...+.||+.|-+.= |- | +...+|+.+++..++..... +++|++++.+ ..-+
T Consensus 21 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~-----~~va 93 (280)
T 1eye_A 21 DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMR-----ADVA 93 (280)
T ss_dssp SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSC-----HHHH
T ss_pred CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCC-----HHHH
Confidence 56654 789999999999999999988772 11 1 23346676666555442211 3789999887 4566
Q ss_pred HHHHHhcCcEEeeccc
Q 007056 297 IAGACAGARQVEVTIN 312 (620)
Q Consensus 297 laAv~aGA~~Vd~Ti~ 312 (620)
.+|+++||+.|+-.-.
T Consensus 94 ~aAl~aGa~iINdvsg 109 (280)
T 1eye_A 94 RAALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHHTTCCEEEETTT
T ss_pred HHHHHcCCCEEEECCC
Confidence 8899999999965433
No 136
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.48 E-value=2.1 Score=43.65 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHHHHHHHH-cCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIK-VGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAG 299 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~-aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaA 299 (620)
.+..|.+-+.++++.+++ .|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCHHHHHHHHHHH
Confidence 367899999999999999 99999999999985 7899999999999987765 3555554 478888999999999
Q ss_pred HHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 300 ACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 300 v~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
-++||+.+=..---+- + .+-++++..++
T Consensus 96 ~~~Gadavlv~~P~y~-~---~~~~~l~~~f~ 123 (293)
T 1f6k_A 96 TELGYDCLSAVTPFYY-K---FSFPEIKHYYD 123 (293)
T ss_dssp HHHTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 9999999866544332 1 23455554443
No 137
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=88.45 E-value=6.9 Score=38.71 Aligned_cols=114 Identities=12% Similarity=-0.006 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCC-------------------ccccCHHHHHHH
Q 007056 205 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT-------------------VGITMPTEFGKL 265 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DT-------------------vG~~~P~~v~~l 265 (620)
+..+.+|+.|...+.-.. -.+..+.+...+.++++.++|+|.|-|... .+.+++....++
T Consensus 7 ~~~~~~~~~~~~~~~~~i-~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~ 85 (262)
T 1rd5_A 7 DTMAALMAKGKTAFIPYI-TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEM 85 (262)
T ss_dssp HHHHHHHHTTCCEEEEEE-ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEe-eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 444555665544222111 123345688889999999999998888532 244688889999
Q ss_pred HHHHHHhCCCCCceeEEEecCCC----cchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 266 IADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 266 i~~l~~~~~~~~~v~i~~H~HND----~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
++.+++.. ++|+.+=...+ .|+ ..+.++||+.|...-..+ ..+++++..++.++
T Consensus 86 i~~ir~~~----~~Pv~~m~~~~~~~~~~~-----~~a~~aGadgv~v~d~~~------~~~~~~~~~~~~~g 143 (262)
T 1rd5_A 86 LREVTPEL----SCPVVLLSYYKPIMFRSL-----AKMKEAGVHGLIVPDLPY------VAAHSLWSEAKNNN 143 (262)
T ss_dssp HHHHGGGC----SSCEEEECCSHHHHSCCT-----HHHHHTTCCEEECTTCBT------TTHHHHHHHHHHTT
T ss_pred HHHHHhcC----CCCEEEEecCcHHHHHHH-----HHHHHcCCCEEEEcCCCh------hhHHHHHHHHHHcC
Confidence 99999874 25543311111 122 128899999887642222 23566666666543
No 138
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=88.42 E-value=1.7 Score=44.35 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=78.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 301 (620)
+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999999999988 56899999999999887665 3555555 47788889999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (294)
T 2ehh_A 94 VGADGALVVVPYYN-K---PTQRGLYEHFK 119 (294)
T ss_dssp TTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred cCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999866543331 2 24455554443
No 139
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=88.38 E-value=5 Score=40.62 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----ccCHHHHHHHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----ITMPTEFGKLIAD 268 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----~~~P~~v~~li~~ 268 (620)
.|.+|++..+...++-. ... |..+.+.++-.+++.+.+.++.+.++|+..|.|-|.++ ...++++.+.|+.
T Consensus 59 vt~~em~~~~~~I~~~~---~~p-viaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~a 134 (275)
T 2ze3_A 59 LTRDEMGREVEAIVRAV---AIP-VNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEA 134 (275)
T ss_dssp SCHHHHHHHHHHHHHHC---SSC-EEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhc---CCC-EEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHH
Confidence 57888888776655543 343 88888777556899999999999999999999999984 4566778888888
Q ss_pred HHHh
Q 007056 269 IKAN 272 (620)
Q Consensus 269 l~~~ 272 (620)
+++.
T Consensus 135 a~~a 138 (275)
T 2ze3_A 135 ARAA 138 (275)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 140
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=88.37 E-value=1.2 Score=45.49 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG--RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHH
Confidence 3578999999999999999999999999998 56899999999999887655 3455544 5778888899999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
++||+.+=..---+- + .+-++++..++.
T Consensus 94 ~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 121 (292)
T 2ojp_A 94 DSGIVGCLTVTPYYN-R---PSQEGLYQHFKA 121 (292)
T ss_dssp TSSCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred hcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 999999865543332 2 245666655543
No 141
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.35 E-value=1.5 Score=45.24 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=82.4
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+|+ +|+.--++..
T Consensus 34 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~~t~~ai~l 111 (315)
T 3na8_A 34 TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH--RVPTIVSVSDLTTAKTVRR 111 (315)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHH
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 4443 45789999999999999999999999999995 5889999999999887655 35666665 6889999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 112 a~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 144 (315)
T 3na8_A 112 AQFAESLGAEAVMVLPISYW-K---LNEAEVFQHYRA 144 (315)
T ss_dssp HHHHHHTTCSEEEECCCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999876543332 1 344666655543
No 142
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.34 E-value=1.3 Score=45.91 Aligned_cols=85 Identities=19% Similarity=0.068 Sum_probs=73.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++-|.++=|+|= ++.+|-.++++.+.+...+ +++|-+|+ +|+.--++..+..|-
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP--DFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT--TSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999994 7899999999999887655 45666665 789999999999999
Q ss_pred HhcCcEEeecc
Q 007056 301 CAGARQVEVTI 311 (620)
Q Consensus 301 ~aGA~~Vd~Ti 311 (620)
++||+.+=..-
T Consensus 104 ~~Gadavlv~~ 114 (318)
T 3qfe_A 104 VAGANYVLVLP 114 (318)
T ss_dssp HHTCSEEEECC
T ss_pred HcCCCEEEEeC
Confidence 99999986643
No 143
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=88.33 E-value=0.89 Score=45.06 Aligned_cols=213 Identities=15% Similarity=0.112 Sum_probs=101.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCC-Ch--hHHHHHHHHHHHhcccccccCCcc-ceEEeeccc-c-------hhhH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAA-SK--EDFEAVRTIAKEVGNAVDAESGYV-PVICGLSRC-N-------ERDI 162 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~--~d~e~v~~i~~~~~~~~~~~~~l~-~~i~~~~r~-~-------~~dI 162 (620)
++.++. ++.+.++|++.||+-.+.. .. .+.+.++.+.+.+... ++. ..++.+... . .+.+
T Consensus 15 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~-----gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (286)
T 3dx5_A 15 ISFTDI---VQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDK-----TLEITMISDYLDISLSADFEKTIEKC 86 (286)
T ss_dssp CCHHHH---HHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGG-----TCCEEEEECCCCCSTTSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHc-----CCeEEEEecCCCCCCchhHHHHHHHH
Confidence 566654 5556678999999943310 00 0012333343332211 332 122222110 0 1234
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCCCCCHHHHHHHHHHHH
Q 007056 163 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVI 241 (620)
Q Consensus 163 ~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~~r~d~e~l~~~~~~~~ 241 (620)
+++++.....|.+.|.++........ ......+...+.+.++.++|++.|+. +.+-+. ...-.+++.+.++++.+
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~l~~~~- 162 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKGSAD--FSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLELLGEV- 162 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSCGGG--SCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCccc--CcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHHHHHhc-
Confidence 45555555568888877543221000 00001345667777888888999974 555332 22234567777776654
Q ss_pred HcCCcEEeec-CCccccCH-HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH---HHH-HhcCcEEeecccccc
Q 007056 242 KVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI---AGA-CAGARQVEVTINGIG 315 (620)
Q Consensus 242 ~aGa~~I~L~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl---aAv-~aGA~~Vd~Ti~GlG 315 (620)
+...+.++ ||.=.... ....+.++.+.. -...+|.+|..+-.....+ ... ..|...- ..-+|
T Consensus 163 --~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~~---~~~~G 230 (286)
T 3dx5_A 163 --DHPNLKINLDFLHIWESGADPVDSFQQLRP-------WIQHYHFKNISSADYLHVFEPNNVYAAAGNRTG---MVPLF 230 (286)
T ss_dssp --CCTTEEEEEEHHHHHHTTCCHHHHHHHHGG-------GEEEEEECEESCGGGGGGGSHHHHHSTTCCCTT---EECGG
T ss_pred --CCCCeEEEeccccHhhcCCCHHHHHHHHHh-------HheEEEecCCcccccccccCccccccccCccee---eeccC
Confidence 33333332 44321100 112233333332 2468899987763210000 000 0121111 12234
Q ss_pred CCcCcccHHHHHHHHHhc
Q 007056 316 ERAGNASLEEVVMAFKCR 333 (620)
Q Consensus 316 ERaGNa~lEevv~~L~~~ 333 (620)
.|+.+...++..|+..
T Consensus 231 --~G~id~~~i~~~L~~~ 246 (286)
T 3dx5_A 231 --EGIVNYDEIIQEVRDT 246 (286)
T ss_dssp --GSSSCHHHHHHHHTTS
T ss_pred --CCcCCHHHHHHHHHhc
Confidence 5899999999999874
No 144
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=88.30 E-value=26 Score=36.35 Aligned_cols=198 Identities=17% Similarity=0.204 Sum_probs=120.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 120 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-------RRVPVLIGTGGTNARETIELSQ 120 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCSSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999998876 4 455566665 44455555432 2357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. ++-|.+++++-..+..+ ..++.-+-|+... +...+++.+.++++ +.
T Consensus 121 ~-A~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~---a~~lPiilYn~P~~tg~~l~~e~~~~La~---~~- 185 (343)
T 2v9d_A 121 H-AQQAGADGIVVINPYY-------WKVSEANLIRYFEQVAD---SVTLPVMLYNFPALTGQDLTPALVKTLAD---SR- 185 (343)
T ss_dssp H-HHHHTCSEEEEECCSS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHHH---HC-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCchhcCcCCCHHHHHHHHH---hC-
Confidence 3 3456999887776642 24466666665554433 3345545665432 33567787777653 23
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++.....-++ ..+ +-+.+++ .+.++..|++ +.|.| .+|...+
T Consensus 186 pnIvgiKdssgd--~~~~~~l~~~~~~~~~~---f~v-~~G~D~~------~l~~l~~Ga~---G~is~----~anv~P~ 246 (343)
T 2v9d_A 186 SNIIGIKDTIDS--VAHLRSMIHTVKGAHPH---FTV-LCGYDDH------LFNTLLLGGD---GAISA----SGNFAPQ 246 (343)
T ss_dssp TTEEEEEECCSC--HHHHHHHHHHHHHHCTT---CEE-EESSGGG------HHHHHHTTCC---EECCG----GGTTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHhcCCCCCC---EEE-EECcHHH------HHHHHHCCCC---EEEeC----HHHhHHH
Confidence 579999999984 45677777655421121 222 3344432 4567778875 44554 5677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 247 ~~~~l~~a 254 (343)
T 2v9d_A 247 VSVNLLKA 254 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 145
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.27 E-value=1.6 Score=44.29 Aligned_cols=114 Identities=14% Similarity=0.204 Sum_probs=73.9
Q ss_pred ceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEEcCCCC
Q 007056 149 PVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDA 225 (620)
Q Consensus 149 ~~i~~~~r~-~~~dI~~a~eal~~ag~~~v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~f~~ed~ 225 (620)
|.+.--+.. ..++++.|++.+...|.+.+++.- .++..= +.++ +.++. .++...++. |+. |.+.+ |=
T Consensus 147 PV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp-----~y~~-~~vdl--~~i~~lk~~~~lp-Vi~ds-sH 216 (276)
T 1vs1_A 147 PVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFE-----PSTR-FTLDV--AAVAVLKEATHLP-VIVDP-SH 216 (276)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSC-----CSSS-SBCBH--HHHHHHHHHBSSC-EEECC-HH
T ss_pred eEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCC-----CcCc-chhCH--HHHHHHHHHhCCC-EEEeC-CC
Confidence 555555553 779999999999888887777754 332100 0011 11221 234445553 776 65544 22
Q ss_pred CCCCHHHHHHHHHHHHHcCCc--EEe--------ecCCccccCHHHHHHHHHHHHHh
Q 007056 226 GRSDRKFLYEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~--~I~--------L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
+....+++..+..+++.+||+ .|- ++|-.=.+.|+++.++++.+++-
T Consensus 217 ~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 217 PAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWH 273 (276)
T ss_dssp HHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHHHT
T ss_pred CCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHHHH
Confidence 234457888888889999998 332 36988999999999999999863
No 146
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=88.27 E-value=18 Score=35.36 Aligned_cols=159 Identities=16% Similarity=0.075 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc----------cchhhHHHH
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR----------CNERDIKTA 165 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r----------~~~~dI~~a 165 (620)
+.++-.++++...+.|..-|++|. + +.++++.+.+. .|.+..+.+ ...++++.+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~~----~---~~i~~ir~~v~---------~Pvig~~k~~~~~~~~~I~~~~~~i~~~ 97 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIEG----I---ENLRTVRPHLS---------VPIIGIIKRDLTGSPVRITPYLQDVDAL 97 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES----H---HHHHHHGGGCC---------SCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCcEEEECC----H---HHHHHHHHhcC---------CCEEEEEeecCCCCceEeCccHHHHHHH
Confidence 567889999999999999999974 3 44555554421 133321111 123345554
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
++ +|++.|.+-... ..++ +.+.+.+++++++|+. +-.++ ++.+ .++.+.++|+
T Consensus 98 ~~----aGad~I~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~e----ea~~a~~~Ga 150 (229)
T 3q58_A 98 AQ----AGADIIAFDASF---------RSRP----VDIDSLLTRIRLHGLL-AMADC-----STVN----EGISCHQKGI 150 (229)
T ss_dssp HH----HTCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----SSHH----HHHHHHHTTC
T ss_pred HH----cCCCEEEECccc---------cCCh----HHHHHHHHHHHHCCCE-EEEec-----CCHH----HHHHHHhCCC
Confidence 44 499988553321 1111 2345678888888874 43333 3333 3456778999
Q ss_pred cEEee--cC-Ccc--ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEe
Q 007056 246 TTLNI--PD-TVG--ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVE 308 (620)
Q Consensus 246 ~~I~L--~D-TvG--~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd 308 (620)
|.|.+ -+ |.+ ...| . .++++.+++. + +|+-. .-|.. ..+...++++||+.|-
T Consensus 151 d~Ig~~~~g~t~~~~~~~~-~-~~li~~l~~~--~---ipvIA----~GGI~t~~d~~~~~~~GadgV~ 208 (229)
T 3q58_A 151 EFIGTTLSGYTGPITPVEP-D-LAMVTQLSHA--G---CRVIA----EGRYNTPALAANAIEHGAWAVT 208 (229)
T ss_dssp SEEECTTTTSSSSCCCSSC-C-HHHHHHHHTT--T---CCEEE----ESSCCSHHHHHHHHHTTCSEEE
T ss_pred CEEEecCccCCCCCcCCCC-C-HHHHHHHHHc--C---CCEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 99942 21 111 1122 1 2566666653 2 23332 23443 5778888889998874
No 147
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.25 E-value=1.7 Score=44.93 Aligned_cols=105 Identities=19% Similarity=0.162 Sum_probs=81.1
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ +++|-+|+ +|+.--++.-
T Consensus 32 TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~~ai~l 109 (315)
T 3si9_A 32 TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK--RVPVVAGAGSNSTSEAVEL 109 (315)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHH
Confidence 4543 45799999999999999999999999999985 5899999999999887655 35666665 7899999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=..---+- + .+-++++..++
T Consensus 110 a~~A~~~Gadavlv~~P~y~-~---~~~~~l~~~f~ 141 (315)
T 3si9_A 110 AKHAEKAGADAVLVVTPYYN-R---PNQRGLYTHFS 141 (315)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999999999865543222 2 23455555444
No 148
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=88.24 E-value=6.6 Score=43.84 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=91.9
Q ss_pred EeCC----CcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhHHH-HHHHHHHHhcccccccCCccce
Q 007056 80 FDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KEDFE-AVRTIAKEVGNAVDAESGYVPV 150 (620)
Q Consensus 80 ~DtT----LRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e-~v~~i~~~~~~~~~~~~~l~~~ 150 (620)
+.+| ++||.+. .+.+..++.++.+.+.|-|+|.+| |++. +++++ .++.+.+.. . +|
T Consensus 322 ~N~Tg~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~--------~-vp- 386 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVS--------N-VP- 386 (566)
T ss_dssp ECCTTCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHT--------C-SC-
T ss_pred ecCCCChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhC--------C-ce-
Confidence 5677 7777654 467999999999999999999999 5542 23332 333443321 1 12
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCC
Q 007056 151 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSD 229 (620)
Q Consensus 151 i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~-~r~d 229 (620)
|+ .--.+.+-++.++++.. |.+.|+ ++|- . + ++..++++.++++|.. |...+.+. ...+
T Consensus 387 is-IDT~~~~v~eaal~~~~--G~~iIN---dis~--------~---~--~~~~~~~~~~~~~g~~-vV~m~~~~~~p~t 446 (566)
T 1q7z_A 387 LS-LDIQNVDLTERALRAYP--GRSLFN---SAKV--------D---E--EELEMKINLLKKYGGT-LIVLLMGKDVPKS 446 (566)
T ss_dssp EE-EECCCHHHHHHHHHHCS--SCCEEE---EEES--------C---H--HHHHHHHHHHHHHCCE-EEEESCSSSCCCS
T ss_pred EE-EeCCCHHHHHHHHHhcC--CCCEEE---ECCc--------c---h--hhHHHHHHHHHHhCCe-EEEEeCCCCCcCC
Confidence 22 22236667787777642 666554 3321 0 1 3344667778888985 55544443 1111
Q ss_pred ----HHHHHHHHHHHHHcCC-cEEee---cCCccccC-HHHHHHHHHHHHH
Q 007056 230 ----RKFLYEILGEVIKVGA-TTLNI---PDTVGITM-PTEFGKLIADIKA 271 (620)
Q Consensus 230 ----~e~l~~~~~~~~~aGa-~~I~L---~DTvG~~~-P~~v~~li~~l~~ 271 (620)
.+++.+.++.+.++|. +.|.| ..|+|... -.++-+-++.+++
T Consensus 447 ~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk~~~~~l~~~~~~~~ 497 (566)
T 1q7z_A 447 FEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISS 497 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcHHHHHHHHHHHHHHh
Confidence 4678888888999998 44443 34557666 1222333444444
No 149
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.24 E-value=1.8 Score=44.64 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=82.4
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+|+ +|+.--++.-
T Consensus 33 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~eai~l 110 (314)
T 3qze_A 33 TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGANSTREAVAL 110 (314)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 4442 45789999999999999999999999999995 5899999999999887765 46666665 7889999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 111 a~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 143 (314)
T 3qze_A 111 TEAAKSGGADACLLVTPYYN-K---PTQEGMYQHFRH 143 (314)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999866543222 2 244566655543
No 150
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.23 E-value=1.9 Score=44.29 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 300 (620)
.+..|.+-+.+.++.+++.|++-|.++=|+|= ++++|-.++++.+.+...+ +++|-+|. +|+.--++.-+..|-
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK--NRLLLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT--TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999995 7899999999999998765 46776665 789999999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
++||+.+=..---+-. +..+-++++..++.
T Consensus 107 ~~Gadavlv~~P~y~~--~~~s~~~l~~~f~~ 136 (307)
T 3s5o_A 107 QVGADAAMVVTPCYYR--GRMSSAALIHHYTK 136 (307)
T ss_dssp HTTCSEEEEECCCTTG--GGCCHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCcCC--CCCCHHHHHHHHHH
Confidence 9999998664322211 11345555555543
No 151
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.22 E-value=2.5 Score=43.53 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=83.9
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++=|+|= ++++|-.++++.+.+.. + +++|-+++ +|+.--++.-
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~~t~~ai~l 94 (313)
T 3dz1_A 18 TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAPGFAAMRRL 94 (313)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCCCHHHHHHH
Confidence 4442 45789999999999999999999999999995 78999999999999888 5 47777776 7999999999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=. +-..- . .+-++++..++
T Consensus 95 a~~A~~~Gadavlv-~~P~~-~---~s~~~l~~~f~ 125 (313)
T 3dz1_A 95 ARLSMDAGAAGVMI-APPPS-L---RTDEQITTYFR 125 (313)
T ss_dssp HHHHHHHTCSEEEE-CCCTT-C---CSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEE-CCCCC-C---CCHHHHHHHHH
Confidence 99999999999866 44442 2 35666666554
No 152
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=88.20 E-value=1.1 Score=47.59 Aligned_cols=157 Identities=15% Similarity=0.145 Sum_probs=96.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec-CC----------------CChhHHHHHHHHHHHhcccccccCCccceEEeecc-
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGF-PA----------------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR- 156 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGf-P~----------------~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r- 156 (620)
++.+.-..+.+...+.|+..+---| |. ..-..++.++.+++. + .|.+..-+.
T Consensus 190 l~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~---------g-kPVilk~G~~ 259 (385)
T 3nvt_A 190 LGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRV---------D-KPILLKRGLS 259 (385)
T ss_dssp CTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTS---------S-SCEEEECCTT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHcc---------C-CcEEEecCCC
Confidence 4555555555666667876553222 11 011234556655542 1 256655555
Q ss_pred cchhhHHHHHHHHhcCCCCEEEEEec-CCHH--HHHHHhCCCHHHHHHHHHHHHHHHHH-cCCCEEEEcCCCCCCCCHHH
Q 007056 157 CNERDIKTAWEAVKYAKRPRIHTFIA-TSGI--HMEHKLRKTKQQVVEIARSMVKFARS-LGCDDVEFSPEDAGRSDRKF 232 (620)
Q Consensus 157 ~~~~dI~~a~eal~~ag~~~v~i~~~-~Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~-~G~~~V~f~~ed~~r~d~e~ 232 (620)
+..+++..|++.+...|.+.|.+.-- +|.. .-...+++ .++...|+ .|+. |.+++.- +--++++
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl----------~~i~~lk~~~~lp-V~~D~th-~~G~r~~ 327 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDI----------SAVPILKKETHLP-VMVDVTH-STGRKDL 327 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCT----------THHHHHHHHBSSC-EEEEHHH-HHCCGGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCH----------HHHHHHHHhcCCC-EEEcCCC-CCCccch
Confidence 78899999999998888876766532 3321 00011222 22333444 5776 7554421 1224578
Q ss_pred HHHHHHHHHHcCCc--EE--------eecCCccccCHHHHHHHHHHHHHhC
Q 007056 233 LYEILGEVIKVGAT--TL--------NIPDTVGITMPTEFGKLIADIKANT 273 (620)
Q Consensus 233 l~~~~~~~~~aGa~--~I--------~L~DTvG~~~P~~v~~li~~l~~~~ 273 (620)
+..+..+++.+||+ .| .++|---.+.|+++.++++.+++-.
T Consensus 328 v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i~ 378 (385)
T 3nvt_A 328 LLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASN 378 (385)
T ss_dssp HHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHHH
Confidence 88899999999999 44 4589999999999999999999753
No 153
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=88.12 E-value=22 Score=35.35 Aligned_cols=224 Identities=17% Similarity=0.171 Sum_probs=130.0
Q ss_pred CceEEEeCCCcccCCCCCC---CCCHHHHHHHHHHHhHcCCCEEEEe--cCCCChhHHHHH----HHHHHHhcccccccC
Q 007056 75 NYVRVFDTTLRDGEQSPGA---TLTSKEKLDIARQLAKLGVDIIEAG--FPAASKEDFEAV----RTIAKEVGNAVDAES 145 (620)
Q Consensus 75 ~~V~I~DtTLRDG~Qs~g~---~fs~~~Kl~Ia~~L~~~Gvd~IEvG--fP~~s~~d~e~v----~~i~~~~~~~~~~~~ 145 (620)
+.|+|-++++=+|.----+ .=+.++-++-++.+...|+|.||.= +-. ...+.+.+ ..+.+..+.
T Consensus 6 ~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~-~~~~~~~v~~~l~~lr~~~~~------ 78 (258)
T 4h3d_A 6 RKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFE-NVENIKEVKEVLYELRSYIHD------ 78 (258)
T ss_dssp CCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCT-TTTCHHHHHHHHHHHHHHCTT------
T ss_pred ceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecccc-ccCCHHHHHHHHHHHHHhcCC------
Confidence 3467777777666521112 3367888888888899999999994 221 22233333 333333211
Q ss_pred CccceEEeecccchhh---------HHHHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC
Q 007056 146 GYVPVICGLSRCNERD---------IKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC 215 (620)
Q Consensus 146 ~l~~~i~~~~r~~~~d---------I~~a~eal~~ag-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~ 215 (620)
.|.|..+ |+..++ -...++.+...+ ++.|-+-....+ +...+.++.+++.|.
T Consensus 79 --lPiI~T~-Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~l~~~a~~~~~ 140 (258)
T 4h3d_A 79 --IPLLFTF-RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDEVVNFAHKKEV 140 (258)
T ss_dssp --SCEEEEC-CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTC
T ss_pred --CCEEEEE-echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHHHHHHHHhCCC
Confidence 2445443 554332 111122222334 677777655432 233466778888887
Q ss_pred CEEEEcCCCCCCCC-HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHH---HHhCCCCCceeEEEecCCCcch
Q 007056 216 DDVEFSPEDAGRSD-RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADI---KANTPGIENVVISTHCQNDLGL 291 (620)
Q Consensus 216 ~~V~f~~ed~~r~d-~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l---~~~~~~~~~v~i~~H~HND~Gl 291 (620)
+ |..|.=|...++ .+.+.+.++.+.+.|||.+-|+=|. -.+.++.++.... ++..++ .|+-.-+ --.+
T Consensus 141 k-iI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~---~P~I~~~--MG~~ 212 (258)
T 4h3d_A 141 K-VIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYAD---RPIITMS--MSGM 212 (258)
T ss_dssp E-EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCS---SCBEEEE--CTGG
T ss_pred E-EEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCC---CCEEEEe--CCCC
Confidence 4 555444544543 5788899999999999999987444 3566777766554 333443 3333222 2223
Q ss_pred HHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 292 STANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 292 AvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
|.-.=+.+-..|--...+++ |-.-..|..+++++-..|+.
T Consensus 213 G~~SRi~~~~fGS~lTf~~~-~~~sAPGQl~~~el~~~l~l 252 (258)
T 4h3d_A 213 GVISRLCGEIFGSALTFGAA-KSVSAPGQISFKELNSVLNL 252 (258)
T ss_dssp GGGGGTCHHHHCBCEEECBC-C---CTTCCBHHHHHHHHHH
T ss_pred ChHHHHHHHHhCCceEeccC-CCCCCCCCCCHHHHHHHHHH
Confidence 33344555667777777776 33457899999998887775
No 154
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.00 E-value=25 Score=35.71 Aligned_cols=194 Identities=11% Similarity=0.164 Sum_probs=119.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCC-ccceEEeecccchhh-HHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESG-YVPVICGLSRCNERD-IKTA 165 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~-l~~~i~~~~r~~~~d-I~~a 165 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... + .+|.|++.+..+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------g~rvpviaGvg~~~t~~ai~la 96 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCK-------GTKVKVLAGAGSNATHEAVGLA 96 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEEECCCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHH
Confidence 478888899999999999999877 3 344455665 34455555432 3 357888887655444 4444
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHc
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~a 243 (620)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++.-+-|+.. .+...+++.+.+++ +.
T Consensus 97 -~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~ 161 (301)
T 3m5v_A 97 -KFAKEHGADGILSVAPYY-------NKPTQQGLYEHYKAIAQS---VDIPVLLYNVPGRTGCEISTDTIIKLF----RD 161 (301)
T ss_dssp -HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH----HH
T ss_pred -HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEeCchhhCcCCCHHHHHHHH----hc
Confidence 334567999987776642 244666666655544443 34554566543 24456777776654 34
Q ss_pred CCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccH
Q 007056 244 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 323 (620)
Q Consensus 244 Ga~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~l 323 (620)
-...+.+.||.|- ..++.++++.. ++ ..+ +-+++++ .+.++..|++.+ +.| .+|..-
T Consensus 162 ~pnivgiKdssgd--~~~~~~~~~~~----~~---f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P 218 (301)
T 3m5v_A 162 CENIYGVKEASGN--IDKCVDLLAHE----PR---MML-ISGEDAI------NYPILSNGGKGV---ISV----TSNLLP 218 (301)
T ss_dssp CTTEEEEEECSSC--HHHHHHHHHHC----TT---SEE-EECCGGG------HHHHHHTTCCEE---EES----GGGTCH
T ss_pred CCCEEEEEeCCCC--HHHHHHHHHhC----CC---eEE-EEccHHH------HHHHHHcCCCEE---Eeh----HHHhhH
Confidence 3478999999873 45566655443 32 223 4444433 456788897643 433 467777
Q ss_pred HHHHHHHHh
Q 007056 324 EEVVMAFKC 332 (620)
Q Consensus 324 Eevv~~L~~ 332 (620)
+.++...+.
T Consensus 219 ~~~~~l~~a 227 (301)
T 3m5v_A 219 DMISALTHF 227 (301)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776665553
No 155
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=87.92 E-value=5.3 Score=40.63 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=89.9
Q ss_pred HHHHHHHHHhcccccccCCccceEEeecccch-hhHHHHHHHHhcCCCCEEEEEec---CCHHHHHHHh---CCCHHHHH
Q 007056 128 EAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKRPRIHTFIA---TSGIHMEHKL---RKTKQQVV 200 (620)
Q Consensus 128 e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~ag~~~v~i~~~---~Sd~h~~~~l---~~t~ee~l 200 (620)
+.+..+++++...+. -.|++++.+-..+ .++...++.++++|+..| +-.| ..|-+.+.+| +++ +
T Consensus 79 ~iv~e~~~evlp~v~----~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~----~ 149 (286)
T 2p10_A 79 QIVVDMAREVLPVVR----HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMS----Y 149 (286)
T ss_dssp HHHHHHHHHHGGGCS----SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCC----H
T ss_pred HHHHHHHHhhhccCC----CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCC----H
Confidence 345555555433222 2477777665443 477888899999999988 4434 3343333333 455 4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe--ec----CCccccC-------HHHHHHHHH
Q 007056 201 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN--IP----DTVGITM-------PTEFGKLIA 267 (620)
Q Consensus 201 ~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~--L~----DTvG~~~-------P~~v~~li~ 267 (620)
++..++|+.|+++|+..+-|. .++ +-++++.++|+|.|. .+ -+.|.-+ |+.+.++++
T Consensus 150 ~~eve~I~~A~~~gL~Ti~~v------~~~----eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 150 AQEVEMIAEAHKLDLLTTPYV------FSP----EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp HHHHHHHHHHHHTTCEECCEE------CSH----HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEec------CCH----HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHH
Confidence 556788999999998543221 122 334566789999765 44 3333321 667778888
Q ss_pred HHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHh--cCcEE
Q 007056 268 DIKANTPGIENVVISTHCQNDLGLS-TANTIAGACA--GARQV 307 (620)
Q Consensus 268 ~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~a--GA~~V 307 (620)
.+++.-|+ +.+-.|.= |.+ ---...+++. |++.+
T Consensus 220 a~~~vnpd---vivLc~gG---pIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 220 AARTIRDD---IIILSHGG---PIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHHHCSC---CEEEEEST---TCCSHHHHHHHHHHCTTCCEE
T ss_pred HHHHhCCC---cEEEecCC---CCCCHHHHHHHHhcCCCccEE
Confidence 88887664 66665641 121 2245666677 77654
No 156
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=87.89 E-value=20 Score=35.06 Aligned_cols=158 Identities=15% Similarity=0.060 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-----------cchhhHHH
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-----------CNERDIKT 164 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-----------~~~~dI~~ 164 (620)
+.++-.++++...+.|..-|++|. + +.++++.+.+. .|.+ +..| ...++++.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~~----~---~~i~~ir~~v~---------~Pvi-g~~k~d~~~~~~~I~~~~~~i~~ 96 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRIEG----I---DNLRMTRSLVS---------VPII-GIIKRDLDESPVRITPFLDDVDA 96 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES----H---HHHHHHHTTCC---------SCEE-EECBCCCSSCCCCBSCSHHHHHH
T ss_pred CcchHHHHHHHHHHCCCeEEEECC----H---HHHHHHHHhcC---------CCEE-EEEeecCCCcceEeCccHHHHHH
Confidence 477889999999999999999963 3 45566555421 1332 2111 12234555
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG 244 (620)
+++ +|++.|.+-... ..++ +.+.+.+++++++|+. +-.+. ++.+ .++.+.++|
T Consensus 97 ~~~----~Gad~V~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~e----ea~~a~~~G 149 (232)
T 3igs_A 97 LAQ----AGAAIIAVDGTA---------RQRP----VAVEALLARIHHHHLL-TMADC-----SSVD----DGLACQRLG 149 (232)
T ss_dssp HHH----HTCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----CSHH----HHHHHHHTT
T ss_pred HHH----cCCCEEEECccc---------cCCH----HHHHHHHHHHHHCCCE-EEEeC-----CCHH----HHHHHHhCC
Confidence 444 499988553321 1111 2345678888888874 43333 3333 345677899
Q ss_pred CcEEee--cC--Ccc-ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEe
Q 007056 245 ATTLNI--PD--TVG-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVE 308 (620)
Q Consensus 245 a~~I~L--~D--TvG-~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd 308 (620)
+|.|.+ -. +.+ ...| --++++.+++. + +|+-. .-|.. ..+...++++||+.|-
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~---ipvIA----~GGI~t~~d~~~~~~~GadgV~ 208 (232)
T 3igs_A 150 ADIIGTTMSGYTTPDTPEEP--DLPLVKALHDA--G---CRVIA----EGRYNSPALAAEAIRYGAWAVT 208 (232)
T ss_dssp CSEEECTTTTSSSSSCCSSC--CHHHHHHHHHT--T---CCEEE----ESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCEEEEcCccCCCCCCCCCC--CHHHHHHHHhc--C---CcEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 999842 21 111 1122 12455666653 2 22321 24553 6788888899999874
No 157
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=87.84 E-value=1.9 Score=44.28 Aligned_cols=105 Identities=17% Similarity=0.153 Sum_probs=79.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHH
Q 007056 221 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANT 296 (620)
Q Consensus 221 ~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANs 296 (620)
.|.+.+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-++ ++|+.--++..+
T Consensus 23 TPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st~~ai~la 100 (306)
T 1o5k_A 23 TPFKNGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNSTEKTLKLV 100 (306)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccHHHHHHHH
Confidence 33333578999999999999999999999999988 56899999999999887654 3455444 578888899999
Q ss_pred HHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 297 IAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 297 laAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
..|-++||+.+=..---+- + .+-++++..++
T Consensus 101 ~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~ 131 (306)
T 1o5k_A 101 KQAEKLGANGVLVVTPYYN-K---PTQEGLYQHYK 131 (306)
T ss_dssp HHHHHHTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 9999999999866544332 2 24455555444
No 158
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.73 E-value=2 Score=42.19 Aligned_cols=185 Identities=18% Similarity=0.144 Sum_probs=99.6
Q ss_pred HHHHHHHHHhHcCCCEEEEec------CCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-hhhHHHHHHHHhc
Q 007056 99 EKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKY 171 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGf------P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~ 171 (620)
.-.+.++.+.+.|+|.|+++. |..+. -.+.++.+.+.. +. +..+-|--.+ .+.++.+.++
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~-g~~~v~~lr~~~-~~--------~~~vhlmv~dp~~~i~~~~~a--- 84 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDGRFVPNITI-GPLIVDAIRPLT-KK--------TLDVHLMIVEPEKYVEDFAKA--- 84 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCB-CHHHHHHHGGGC-CS--------EEEEEEESSSGGGTHHHHHHH---
T ss_pred HHHHHHHHHHHcCCCEEEEEEEecCCCcchhh-hHHHHHHHHhhc-CC--------cEEEEEEccCHHHHHHHHHHc---
Confidence 334567788899999999974 32221 235666665432 10 1111111122 2346666665
Q ss_pred CCCCEEEEEec--CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 007056 172 AKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 172 ag~~~v~i~~~--~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~ 249 (620)
|++.|++-.- ..+ ...+.++.+++.|+. +-++.. ..++.+.+..++ .++|.|.
T Consensus 85 -Gadgv~vh~e~~~~~----------------~~~~~~~~i~~~g~~-~gv~~~--p~t~~e~~~~~~-----~~~D~v~ 139 (230)
T 1tqj_A 85 -GADIISVHVEHNASP----------------HLHRTLCQIRELGKK-AGAVLN--PSTPLDFLEYVL-----PVCDLIL 139 (230)
T ss_dssp -TCSEEEEECSTTTCT----------------THHHHHHHHHHTTCE-EEEEEC--TTCCGGGGTTTG-----GGCSEEE
T ss_pred -CCCEEEECcccccch----------------hHHHHHHHHHHcCCc-EEEEEe--CCCcHHHHHHHH-----hcCCEEE
Confidence 8999987643 322 234677888889975 444331 023334333222 2678663
Q ss_pred e----cCCccccCHHHHHHHHHHHHHhCC--CCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee--ccccccCCcCcc
Q 007056 250 I----PDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQVEV--TINGIGERAGNA 321 (620)
Q Consensus 250 L----~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~--Ti~GlGERaGNa 321 (620)
+ +-+.|...+....+.++.+++..+ +. +++|.+ |.|.-..|.-...++||+.+=+ +|. +..
T Consensus 140 ~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~-~~~I~v----~GGI~~~~~~~~~~aGad~vvvGSai~------~a~ 208 (230)
T 1tqj_A 140 IMSVNPGFGGQSFIPEVLPKIRALRQMCDERGL-DPWIEV----DGGLKPNNTWQVLEAGANAIVAGSAVF------NAP 208 (230)
T ss_dssp EESSCC----CCCCGGGHHHHHHHHHHHHHHTC-CCEEEE----ESSCCTTTTHHHHHHTCCEEEESHHHH------TSS
T ss_pred EEEeccccCCccCcHHHHHHHHHHHHHHHhcCC-CCcEEE----ECCcCHHHHHHHHHcCCCEEEECHHHH------CCC
Confidence 3 233343334455566666666542 00 255665 6788888888999999988622 122 223
Q ss_pred cHHHHHHHHHh
Q 007056 322 SLEEVVMAFKC 332 (620)
Q Consensus 322 ~lEevv~~L~~ 332 (620)
+.++.+..|+.
T Consensus 209 d~~~~~~~l~~ 219 (230)
T 1tqj_A 209 NYAEAIAGVRN 219 (230)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 45666666653
No 159
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.71 E-value=4.4 Score=41.53 Aligned_cols=109 Identities=21% Similarity=0.173 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 262 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v 262 (620)
.|.+|++..+....+- .... |..+.+.++-.+++.+.+.++.+.++|+..|.|-|..+ ....++.
T Consensus 61 vt~~em~~~~~~I~~~---~~~P-viaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~ 136 (295)
T 1xg4_A 61 STLDDVLTDIRRITDV---CSLP-LLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEM 136 (295)
T ss_dssp SCHHHHHHHHHHHHHH---CCSC-EEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhh---CCCC-EEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHH
Confidence 5788888877665543 2344 78888767555899999999999999999999999974 3444566
Q ss_pred HHHHHHHHHhCCCCCceeEEEec----CCCcchHHHHHHHHHHhcCcEE
Q 007056 263 GKLIADIKANTPGIENVVISTHC----QNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 263 ~~li~~l~~~~~~~~~v~i~~H~----HND~GlAvANslaAv~aGA~~V 307 (620)
.+.|+.+++.-.+. +..|-.-+ .+.+--++.-+.+..+|||+.|
T Consensus 137 ~~~I~Aa~~a~~~~-~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 137 VDRIRAAVDAKTDP-DFVIMARTDALAVEGLDAAIERAQAYVEAGAEML 184 (295)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccCC-CcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 67777777653221 23333222 1122346777788888888876
No 160
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=87.60 E-value=1.6 Score=44.48 Aligned_cols=100 Identities=20% Similarity=0.154 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 301 (620)
+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+| ++|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG--RVPVIAGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHHH
Confidence 578999999999999999999999999988 56899999999999887654 2444443 57788889999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (292)
T 2vc6_A 94 AGADGVLIVSPYYN-K---PTQEGIYQHFK 119 (292)
T ss_dssp TTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 99999855443331 2 24455555443
No 161
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=87.59 E-value=17 Score=37.10 Aligned_cols=199 Identities=18% Similarity=0.244 Sum_probs=105.1
Q ss_pred eEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccC
Q 007056 77 VRVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAES 145 (620)
Q Consensus 77 V~I~DtTL---RDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~ 145 (620)
+-|+.+|. =||.+ .++.+..++.++.+.+.|.|+|.+|. |.+. ++|++.+.-+.+.+....
T Consensus 43 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~---- 114 (297)
T 1tx2_A 43 MGILNVTPDSFSDGGS----YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV---- 114 (297)
T ss_dssp EEECCCCCCTTCSSCB----HHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----
T ss_pred EEEEeCCCCccccCCc----cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----
Confidence 44666665 45543 46789999999999999999999995 4322 234443322222221110
Q ss_pred CccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC
Q 007056 146 GYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA 225 (620)
Q Consensus 146 ~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~ 225 (620)
+ +| |+.= -.+.+-++.++++ |.+.|+ .+|-. +.. .++++.+++.|+. |......+
T Consensus 115 ~-vp-iSID-T~~~~V~~aAl~a----Ga~iIN---dvsg~------~~d--------~~m~~~aa~~g~~-vVlmh~~G 169 (297)
T 1tx2_A 115 K-LP-ISID-TYKAEVAKQAIEA----GAHIIN---DIWGA------KAE--------PKIAEVAAHYDVP-IILMHNRD 169 (297)
T ss_dssp C-SC-EEEE-CSCHHHHHHHHHH----TCCEEE---ETTTT------SSC--------THHHHHHHHHTCC-EEEECCCS
T ss_pred C-ce-EEEe-CCCHHHHHHHHHc----CCCEEE---ECCCC------CCC--------HHHHHHHHHhCCc-EEEEeCCC
Confidence 1 12 2222 2356667777776 777664 44320 011 1445666778876 44433211
Q ss_pred C-C-CC-----HHHHHHHHHHHHHcCCc--EEeecCCccc-cCHHHHHHHHHHHHHhC-CCCCceeEEEe----------
Q 007056 226 G-R-SD-----RKFLYEILGEVIKVGAT--TLNIPDTVGI-TMPTEFGKLIADIKANT-PGIENVVISTH---------- 284 (620)
Q Consensus 226 ~-r-~d-----~e~l~~~~~~~~~aGa~--~I~L~DTvG~-~~P~~v~~li~~l~~~~-~~~~~v~i~~H---------- 284 (620)
. + .+ .+++.+.++.+.++|++ .|.|==-+|. -+.++-.++++.++.-- .+. .+-+++.
T Consensus 170 ~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~-Pvl~G~Srksfig~~~g 248 (297)
T 1tx2_A 170 NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGY-PVLLGTSRKSFIGHVLD 248 (297)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCS-CBEEECTTCHHHHHHHT
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCC-CEEEEeccchhhhhhcC
Confidence 1 1 11 37888888889999986 3433212222 24455556666554311 121 1344433
Q ss_pred --cCCCcchHHHHHHHHHHhcCcEEee
Q 007056 285 --CQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 285 --~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..+-.+-.+|-+..|+..||+.|.+
T Consensus 249 ~~~~~r~~~t~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 249 LPVEERLEGTGATVCLGIEKGCEFVRV 275 (297)
T ss_dssp CCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHhHHHHHHHHHHHHHCCCcEEEe
Confidence 1122233344556677778888765
No 162
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=87.49 E-value=15 Score=38.41 Aligned_cols=178 Identities=18% Similarity=0.181 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 164 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~--------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 164 (620)
=+.+.-+++++.+.++|.+.+=.++ |..++ +.++.+++.+++. |+ +.++ .-.....++.
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--------Gl-~~~t--e~~d~~~~~~ 185 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--------GM-YVVT--EALGEDDLPK 185 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEE--ECSSGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--------CC-cEEE--EeCCHHHHHH
Confidence 3899999999999999999987764 55554 2344455555443 22 2222 1224455555
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG 244 (620)
..+. ++.+.| ++.+.. +. +.++++-..|.. |.++- +.-.+++.+...++.+...|
T Consensus 186 l~~~-----vd~lkI--gAr~~~-----------n~----~LL~~va~~~kP-Vilk~--G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 186 VAEY-----ADIIQI--GARNAQ-----------NF----RLLSKAGSYNKP-VLLKR--GFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp HHHH-----CSEEEE--CGGGTT-----------CH----HHHHHHHTTCSC-EEEEC--CTTCCHHHHHHHHHHHHHTT
T ss_pred HHHh-----CCEEEE--Cccccc-----------CH----HHHHHHHccCCc-EEEcC--CCCCCHHHHHHHHHHHHHCC
Confidence 4442 466665 332211 11 233444457775 77753 22347788888888888999
Q ss_pred CcEEeecC--Cccc--cCHHHHH-HHHHHHHHhCCCCCceeEEE---ecCCCcchHHHHHHHHHHhcCc--EEeeccc
Q 007056 245 ATTLNIPD--TVGI--TMPTEFG-KLIADIKANTPGIENVVIST---HCQNDLGLSTANTIAGACAGAR--QVEVTIN 312 (620)
Q Consensus 245 a~~I~L~D--TvG~--~~P~~v~-~li~~l~~~~~~~~~v~i~~---H~HND~GlAvANslaAv~aGA~--~Vd~Ti~ 312 (620)
...+.||. +..+ .+++.+. ..|..+++.+. ++|.+ |.=.+.-+...-+++|+.+||+ .|+.=+.
T Consensus 241 N~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~----lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 241 NTKIILCERGIRTFEKATRNTLDISAVPIIRKESH----LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS----SCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhC----CCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 88888885 2222 1223222 23466777642 44644 6534444557778889999999 8877654
No 163
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=87.47 E-value=2.5 Score=41.32 Aligned_cols=169 Identities=17% Similarity=0.160 Sum_probs=88.4
Q ss_pred HHHHHHHHHhHcCCCEEEEe----cCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 99 EKLDIARQLAKLGVDIIEAG----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvG----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
+-+++++.+.+.|++.|.+= ........ +.++.+++... .|.++...-.++++++.+++ +|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggI~~~~~~~~~l~----~Ga 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMD---------IKVELSGGIRDDDTLAAALA----TGC 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcC---------CcEEEECCcCCHHHHHHHHH----cCC
Confidence 56788999999999999982 21123344 77888877531 13444333234566666655 488
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-EEEEcCCC------CC-CCCHHHHHHHHHHHHHcCCc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPED------AG-RSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~-~V~f~~ed------~~-r~d~e~l~~~~~~~~~aGa~ 246 (620)
+.|++-.. .+.......+..+.+|.. .+..++.+ .+ .... ...+.++.+.+.|++
T Consensus 99 d~V~lg~~----------------~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 99 TRVNLGTA----------------ALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCA 161 (244)
T ss_dssp SEEEECHH----------------HHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTTCC
T ss_pred CEEEECch----------------HhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCCCC
Confidence 98875221 111111222333344421 12223210 00 1111 344666777889999
Q ss_pred EEeecCCc--cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH-HHHHHHHHh---cCcEE
Q 007056 247 TLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 307 (620)
Q Consensus 247 ~I~L~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a---GA~~V 307 (620)
.|.+-++. |..... --++++.+++... +|+-. +-|... .|...++++ ||+.|
T Consensus 162 ~i~~~~~~~~~~~~g~-~~~~~~~i~~~~~----ipvia----~GGI~~~~d~~~~~~~~~~Gadgv 219 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGP-NLELLKNVCAATD----RPVVA----SGGVSSLDDLRAIAGLVPAGVEGA 219 (244)
T ss_dssp CEEEEEC-------CC-CHHHHHHHHHTCS----SCEEE----ESCCCSHHHHHHHHTTGGGTEEEE
T ss_pred EEEEeccCcccccCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHhhccCCCcee
Confidence 88775532 211111 1345666666542 34432 356664 777778888 87765
No 164
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=87.39 E-value=3.6 Score=42.22 Aligned_cols=205 Identities=13% Similarity=0.080 Sum_probs=120.6
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhcccccccCCccceEE----eecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 165 (620)
++.++++|++.|=+|. |...+ +....++.|++.... |.++ |++ ....+.+.
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------PviaD~d~Gyg--~~~~v~~~ 103 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNL---------PLLVDIDTGWG--GAFNIART 103 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCS---------CEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCC---------eEEEECCCCCC--CHHHHHHH
Confidence 5667888999998863 32221 224566777664311 3232 233 45555566
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhC---CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLR---KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 241 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~---~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~-r~d~e~l~~~~~~~~ 241 (620)
.+.+..+|+..|++-..+++-.+-+.-+ .+.+|..++++.+++..+ |.+.+...=.|+. ....+..++-+++..
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTDa~~~~gldeai~Ra~ay~ 181 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTDAAAAEGIDAAIERAIAYV 181 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeehhhhhcCHHHHHHHHHhhH
Confidence 6666778999999988776421111011 367888888876665432 3331221111221 112456777778888
Q ss_pred HcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcc
Q 007056 242 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 321 (620)
Q Consensus 242 ~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa 321 (620)
++|||.|.+. |..+++++.++.+.+. .| +.+-+-..+...+ -+.-.--+.|+++|-....+ =|+-+.
T Consensus 182 ~AGAD~if~~---~~~~~ee~~~~~~~~~--~P----l~~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~--~raa~~ 248 (298)
T 3eoo_A 182 EAGADMIFPE---AMKTLDDYRRFKEAVK--VP----ILANLTEFGSTPL--FTLDELKGANVDIALYCCGA--YRAMNK 248 (298)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHHHC--SC----BEEECCTTSSSCC--CCHHHHHHTTCCEEEECSHH--HHHHHH
T ss_pred hcCCCEEEeC---CCCCHHHHHHHHHHcC--CC----eEEEeccCCCCCC--CCHHHHHHcCCeEEEEchHH--HHHHHH
Confidence 9999999876 3457898888888774 33 2222222221111 13445556799998544443 478888
Q ss_pred cHHHHHHHHHhcc
Q 007056 322 SLEEVVMAFKCRG 334 (620)
Q Consensus 322 ~lEevv~~L~~~~ 334 (620)
++++++..|...|
T Consensus 249 a~~~~~~~i~~~g 261 (298)
T 3eoo_A 249 AALNFYETVRRDG 261 (298)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 9999998888765
No 165
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=87.39 E-value=2.2 Score=43.95 Aligned_cols=101 Identities=11% Similarity=0.032 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
.+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-+++=.+.--++.-+..|-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~st~~ai~la~~A~~ 104 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGYSVDTAIELGKSAID 104 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCcCHHHHHHHHHHHHH
Confidence 3589999999999999999999999999988 57899999999999987665 355555543266778888999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+- + .+-++++..++
T Consensus 105 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 130 (314)
T 3d0c_A 105 SGADCVMIHQPVHP-Y---ITDAGAVEYYR 130 (314)
T ss_dssp TTCSEEEECCCCCS-C---CCHHHHHHHHH
T ss_pred cCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999866544332 1 23455554443
No 166
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=87.32 E-value=8.8 Score=38.47 Aligned_cols=176 Identities=15% Similarity=0.146 Sum_probs=104.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 163 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~--------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 163 (620)
.=+.+.-+++++.|.++|.+.+=.++ |..++ +.+..+++++++.+ + +.++- --....++
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--------l-~~~te--~~d~~~~~ 101 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--------L-VTVTE--VMDTRHVE 101 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--------C-EEEEE--CCCGGGHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--------C-cEEEe--eCCHHhHH
Confidence 34799999999999999999988775 44443 23445555554432 2 22221 12334455
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHc
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~a 243 (620)
...+. ++.+.|-.. +.. +. +.++++-+.|.. |.++- +.-.+++.+...++.+...
T Consensus 102 ~l~~~-----vd~~kIga~--~~~-----------n~----~ll~~~a~~~kP-V~lk~--G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 102 LVAKY-----SDILQIGAR--NSQ-----------NF----ELLKEVGKVENP-VLLKR--GMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HHHHH-----CSEEEECGG--GTT-----------CH----HHHHHHTTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTT
T ss_pred HHHhh-----CCEEEECcc--ccc-----------CH----HHHHHHHhcCCc-EEEec--CCCCCHHHHHHHHHHHHHC
Confidence 44332 566665322 111 11 233444447875 77743 2233788888888888888
Q ss_pred CCcEEeecC----Cc-cccCHHHHH-HHHHHHHHhCCCCCceeE-EEecCCCcch---HHHHHHHHHHhcCc--EEeecc
Q 007056 244 GATTLNIPD----TV-GITMPTEFG-KLIADIKANTPGIENVVI-STHCQNDLGL---STANTIAGACAGAR--QVEVTI 311 (620)
Q Consensus 244 Ga~~I~L~D----Tv-G~~~P~~v~-~li~~l~~~~~~~~~v~i-~~H~HND~Gl---AvANslaAv~aGA~--~Vd~Ti 311 (620)
|...+.|+- |+ ++ .++.+. .-+..+++.+. ++| +.=.|- .|. .-.-+.+|+..||+ .|+.=+
T Consensus 157 Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk~~~~----~pVi~d~sH~-~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 157 GNENVILCERGIRTFETA-TRFTLDISAVPVVKELSH----LPIIVDPSHP-AGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp TCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBS----SCEEECSSTT-TCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHHhhhC----CCEEEEcCCC-CCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 987777776 54 55 455444 56677887642 344 444443 232 22446679999999 887654
No 167
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.26 E-value=9.8 Score=39.09 Aligned_cols=106 Identities=20% Similarity=0.178 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 262 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v 262 (620)
.|.+|++..+...++-+ ... |..+.+.++ -+++.+.+.++.+.++|+..|.|-|.++ ...++++
T Consensus 72 vt~~em~~~~~~I~r~~---~~p-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~ 146 (305)
T 3ih1_A 72 VTSTEVAERARDLVRAT---DLP-VLVDIDTGF-GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEEL 146 (305)
T ss_dssp SCHHHHHHHHHHHHHHH---CCC-EEEECTTCS-SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHHhc---CCC-EEEECCCCC-CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHH
Confidence 46888888776665543 344 778886654 5688899999999999999999999874 3455678
Q ss_pred HHHHHHHHHhCCCCCceeEEEecC----CCcchHHHHHHHHHHhcCcEE
Q 007056 263 GKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 263 ~~li~~l~~~~~~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~V 307 (620)
.+.|+.+++.-++ ..|-.=+- +.+--++.-+.+..+|||+.|
T Consensus 147 ~~rI~Aa~~A~~~---~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i 192 (305)
T 3ih1_A 147 VQKIKAIKEVAPS---LYIVARTDARGVEGLDEAIERANAYVKAGADAI 192 (305)
T ss_dssp HHHHHHHHHHCTT---SEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCC---eEEEEeeccccccCHHHHHHHHHHHHHcCCCEE
Confidence 8888888877322 33332221 123456777788888888876
No 168
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.24 E-value=1.8 Score=44.30 Aligned_cols=100 Identities=25% Similarity=0.220 Sum_probs=78.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHHHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 301 (620)
+..|.+-+.++++.+++.|++-|.++-|+| .++++|-.++++.+.+...+ +++|-++ ++|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG--RVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEccCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999999999988 57899999999999887655 3444444 57888889999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (297)
T 2rfg_A 94 AGADAVLCVAGYYN-R---PSQEGLYQHFK 119 (297)
T ss_dssp HTCSEEEECCCTTT-C---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 99999866544332 2 24566665544
No 169
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.21 E-value=2 Score=44.33 Aligned_cols=105 Identities=16% Similarity=0.108 Sum_probs=81.0
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCcc---ccCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-+|. +|+.--++..
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 94 (311)
T 3h5d_A 17 TPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG--RVPLIAGVGTNDTRDSIEF 94 (311)
T ss_dssp CCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS--SSCEEEECCCSSHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 4442 3578999999999999999999999999999 57999999999999998765 46666665 7888899999
Q ss_pred HHHHHHhcC-cEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGA-RQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA-~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++|+ +.+=..---+- + .+-++++..++
T Consensus 95 a~~A~~~Ga~davlv~~P~y~-~---~s~~~l~~~f~ 127 (311)
T 3h5d_A 95 VKEVAEFGGFAAGLAIVPYYN-K---PSQEGMYQHFK 127 (311)
T ss_dssp HHHHHHSCCCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 999999997 88755433221 2 24455555444
No 170
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=87.18 E-value=18 Score=36.50 Aligned_cols=148 Identities=12% Similarity=0.184 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 164 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 164 (620)
..++.+..++-++.+.+-|.|+|++|- |++. .+|++.+.-+.+.+... + ..|+ .--.+.+-++.
T Consensus 25 ~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~-----~--v~iS-IDT~~~~Va~~ 96 (270)
T 4hb7_A 25 KFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGF-----D--VKIS-VDTFRSEVAEA 96 (270)
T ss_dssp --CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTS-----S--SEEE-EECSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcC-----C--CeEE-EECCCHHHHHH
Confidence 346889999999999999999999994 5433 23455554444443221 1 1222 22234555666
Q ss_pred HHHHHhcCCCCEEEEEec-CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCCCCC------HHHHHHH
Q 007056 165 AWEAVKYAKRPRIHTFIA-TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSD------RKFLYEI 236 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~-~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~~r~d------~e~l~~~ 236 (620)
|+++ |++.|+-.-. ..| .++.+.+.++|+. ++.... ...+++ .+|+.+-
T Consensus 97 al~a----Ga~iINDVs~g~~d------------------~~m~~~va~~~~~-~vlMH~~~~p~~~~vv~ev~~~l~~~ 153 (270)
T 4hb7_A 97 CLKL----GVDMINDQWAGLYD------------------HRMFQIVAKYDAE-IILMHNGNGNRDEPVVEEMLTSLLAQ 153 (270)
T ss_dssp HHHH----TCCEEEETTTTSSC------------------THHHHHHHHTTCE-EEEECCCSSCCSSCHHHHHHHHHHHH
T ss_pred HHHh----ccceeccccccccc------------------hhHHHHHHHcCCC-eEEeccccCCccccchhHHHHHHHHH
Confidence 7765 8877764211 111 1344556667775 444221 111222 2566666
Q ss_pred HHHHHHcCCc--EEeecCCcccc-CHHHHHHHHHHHHH
Q 007056 237 LGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIKA 271 (620)
Q Consensus 237 ~~~~~~aGa~--~I~L~DTvG~~-~P~~v~~li~~l~~ 271 (620)
++.+.++|++ .|.|==-.|.. ++++=.++++.+.+
T Consensus 154 i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 154 AHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDE 191 (270)
T ss_dssp HHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHH
Confidence 7778888874 45443344544 56666667666543
No 171
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=87.17 E-value=6.7 Score=38.09 Aligned_cols=198 Identities=15% Similarity=0.159 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe-cCCC----ChhHHHHHHHHHHHhcccccccCCccc-eEEe---ecccc-------
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAG-FPAA----SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG---LSRCN------- 158 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvG-fP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~---~~r~~------- 158 (620)
++.++.++. +.++|++.||+. .+.. .+.+.+.++++.+.. ++.. .+.. |....
T Consensus 14 ~~~~~~l~~---~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~ 82 (278)
T 1i60_A 14 SNLKLDLEL---CEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTH--------HIKPLALNALVFFNNRDEKGHNEI 82 (278)
T ss_dssp CCHHHHHHH---HHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTS--------SCEEEEEEEEECCSSCCHHHHHHH
T ss_pred CCHHHHHHH---HHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHc--------CCCeeeeccccccccCCHHHHHHH
Confidence 566665544 567799999997 4321 223445555555532 2321 1222 11111
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCEEEEcCCCC---CCCCHH
Q 007056 159 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPEDA---GRSDRK 231 (620)
Q Consensus 159 ~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~a~~~G~~~V~f~~ed~---~r~d~e 231 (620)
.+.++++++.....|.+.|.+.....+- +.+. +...+.+.++.++|++.|+. +.+-+... .-.+++
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~------~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~ 155 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQ------KIVKEEIKKSSVDVLTELSDIAEPYGVK-IALEFVGHPQCTVNTFE 155 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSS------CCCHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCTTBSSCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCE-EEEEecCCccchhcCHH
Confidence 1234455555555688888774332210 2232 34556666777778888874 55533221 234677
Q ss_pred HHHHHHHHHHHcCCcEEee-cCCccc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 232 FLYEILGEVIKVGATTLNI-PDTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L-~DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.+.++++.+ +...+.+ -||.=. ..|.+ . .+.+. +-...+|.||..+.. .|-.
T Consensus 156 ~~~~l~~~~---~~~~~g~~~D~~h~~~~g~d~~~------~-~~~~~---~~i~~vHl~D~~~~~---------~g~~- 212 (278)
T 1i60_A 156 QAYEIVNTV---NRDNVGLVLDSFHFHAMGSNIES------L-KQADG---KKIFIYHIDDTEDFP---------IGFL- 212 (278)
T ss_dssp HHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHH------H-HTSCG---GGEEEEEECEECCCC---------TTTC-
T ss_pred HHHHHHHHh---CCCCeeEEEEeEEEeecCCCHHH------H-HhcCc---ceEEEEEecCCCCCC---------ccch-
Confidence 777777655 3333333 254211 13332 2 22232 235689999865431 0100
Q ss_pred EeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 307 VEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 307 Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.+.--.-+|+ |..+.+.++..|+..++
T Consensus 213 ~~~~~~~~G~--G~id~~~~~~~L~~~gy 239 (278)
T 1i60_A 213 TDEDRVWPGQ--GAIDLDAHLSALKEIGF 239 (278)
T ss_dssp CGGGEESTTS--SSSCHHHHHHHHHHTTC
T ss_pred hhccCCCCCC--CCCcHHHHHHHHHHcCC
Confidence 0000123454 89999999999998663
No 172
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=87.08 E-value=2.2 Score=43.40 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=55.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC-Cc--c---ccCHHHHH---HHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--G---ITMPTEFG---KLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~D-Tv--G---~~~P~~v~---~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
|+++. +++.+.+.++...+.||+.|-+.= +. | +...+|.. .+|+.+++.+ +++|++++.+ .
T Consensus 30 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~~piSIDT~~-----~ 100 (282)
T 1aj0_A 30 DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----EVWISVDTSK-----P 100 (282)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----CCEEEEECCC-----H
T ss_pred cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----CCeEEEeCCC-----H
Confidence 55654 578999999999999999987763 22 2 11134554 4555566655 3789999987 4
Q ss_pred HHHHHHHHhcCcEEeecc
Q 007056 294 ANTIAGACAGARQVEVTI 311 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti 311 (620)
.-+.+|+++|++.|+-.-
T Consensus 101 ~va~aAl~aGa~iINdvs 118 (282)
T 1aj0_A 101 EVIRESAKVGAHIINDIR 118 (282)
T ss_dssp HHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 556789999999996543
No 173
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.96 E-value=2.3 Score=44.47 Aligned_cols=90 Identities=14% Similarity=0.052 Sum_probs=74.6
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +++|-+++ +|+.--++..
T Consensus 41 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~l 118 (343)
T 2v9d_A 41 TIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR--RVPVLIGTGGTNARETIEL 118 (343)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCSSCHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 5543 35899999999999999999999999999985 7899999999999887655 35565554 6888899999
Q ss_pred HHHHHHhcCcEEeeccc
Q 007056 296 TIAGACAGARQVEVTIN 312 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~ 312 (620)
+..|-++||+.|=..--
T Consensus 119 a~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 119 SQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHTCSEEEEECC
T ss_pred HHHHHhcCCCEEEECCC
Confidence 99999999999866543
No 174
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.95 E-value=3.9 Score=40.96 Aligned_cols=73 Identities=14% Similarity=0.249 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc-----cccCHHHHHHHHH
Q 007056 193 RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV-----GITMPTEFGKLIA 267 (620)
Q Consensus 193 ~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv-----G~~~P~~v~~li~ 267 (620)
..|.+|++..+...++-.. .. |..+.++++..++ .+.++.+.++|+..|.|-|.+ ....++++.+.|+
T Consensus 62 ~vt~~em~~~~~~I~r~~~---~p-viaD~~~Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~ 134 (255)
T 2qiw_A 62 NMNFADYMAVVKKITSAVS---IP-VSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIA 134 (255)
T ss_dssp CSCHHHHHHHHHHHHHHCS---SC-EEEECTTCTTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhcCC---CC-EEeccCCCcCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHH
Confidence 3578888887766554432 43 7888877755566 788888889999999999997 2345678888998
Q ss_pred HHHHh
Q 007056 268 DIKAN 272 (620)
Q Consensus 268 ~l~~~ 272 (620)
.+++.
T Consensus 135 a~~~a 139 (255)
T 2qiw_A 135 AARQA 139 (255)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
No 175
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=86.93 E-value=2.7 Score=40.21 Aligned_cols=172 Identities=13% Similarity=0.051 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhHcCCCEEEEec-CCC---C-hhHHHHHHHHHHHhcccccccCCccceEEeec-ccchhhHHHHHHHHh
Q 007056 97 SKEKLDIARQLAKLGVDIIEAGF-PAA---S-KEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNERDIKTAWEAVK 170 (620)
Q Consensus 97 ~~~Kl~Ia~~L~~~Gvd~IEvGf-P~~---s-~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~~dI~~a~eal~ 170 (620)
..+-.+.++.+.+.|++++++.. .++ . ..-.+.+++|.+..+ . +..+.+. +-..+.++.+.++
T Consensus 15 ~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~--------~-~~~v~l~v~d~~~~i~~~~~~-- 83 (220)
T 2fli_A 15 YANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSK--------L-VFDCHLMVVDPERYVEAFAQA-- 83 (220)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC--------S-EEEEEEESSSGGGGHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCC--------C-CEEEEEeecCHHHHHHHHHHc--
Confidence 34556778888999999988864 222 1 111567777765321 1 2233333 3233456666554
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
|++.|++-....+ ...+.++.+++.|.. +.++. +. .++.+.+.++ ..+++.|.+
T Consensus 84 --gad~v~vh~~~~~----------------~~~~~~~~~~~~g~~-i~~~~-~~-~t~~e~~~~~-----~~~~d~vl~ 137 (220)
T 2fli_A 84 --GADIMTIHTESTR----------------HIHGALQKIKAAGMK-AGVVI-NP-GTPATALEPL-----LDLVDQVLI 137 (220)
T ss_dssp --TCSEEEEEGGGCS----------------CHHHHHHHHHHTTSE-EEEEE-CT-TSCGGGGGGG-----TTTCSEEEE
T ss_pred --CCCEEEEccCccc----------------cHHHHHHHHHHcCCc-EEEEE-cC-CCCHHHHHHH-----HhhCCEEEE
Confidence 8999876543321 223456666777764 44433 11 2343433222 245776643
Q ss_pred cCCc-----cccCHHHHHHHHHHHHHhCCCC-CceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 251 PDTV-----GITMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 251 ~DTv-----G~~~P~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
||+ |...++..-+.++.+++..+.. .++++.+ +.|....|.-.++++||+.|.+.
T Consensus 138 -~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 138 -MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp -ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred -EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
Confidence 333 3222222233344444432100 0133333 35555578888889999988653
No 176
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=86.81 E-value=4.5 Score=39.64 Aligned_cols=170 Identities=13% Similarity=0.175 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-hhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~ag 173 (620)
.+.++-+++++.+.. .++.+++|.+---..-.+.++.|.+..+. ..+.-+-+.. .+-++...+....+|
T Consensus 22 ~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~~G~~~v~~l~~~~g~---------~v~lD~Kl~DipnTv~~~~~~~~~~g 91 (228)
T 3m47_A 22 MNRDDALRVTGEVRE-YIDTVKIGYPLVLSEGMDIIAEFRKRFGC---------RIIADFKVADIPETNEKICRATFKAG 91 (228)
T ss_dssp CSHHHHHHHHHTTTT-TCSEEEEEHHHHHHHCTHHHHHHHHHHCC---------EEEEEEEECSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCC-cccEEEEcHHHHHhcCHHHHHHHHhcCCC---------eEEEEEeecccHhHHHHHHHHHHhCC
Confidence 356666666665421 28999999642111112566666652111 2344444442 222455666666789
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCC--CCCC-HHHHHHHHHHHHHcCCcEEe
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDA--GRSD-RKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~--~r~d-~e~l~~~~~~~~~aGa~~I~ 249 (620)
++.|.+...... +++..+++.+++.|.. |.. ...+. .... .+++.++++.+.+.|.+-+.
T Consensus 92 ad~vtvh~~~G~---------------~~l~~~~~~~~~~g~~-v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV 155 (228)
T 3m47_A 92 ADAIIVHGFPGA---------------DSVRACLNVAEEMGRE-VFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYV 155 (228)
T ss_dssp CSEEEEESTTCH---------------HHHHHHHHHHHHHTCE-EEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEeccCCH---------------HHHHHHHHHHHhcCCC-eEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 998776443322 3455667777777753 433 22111 1111 25667788888899988765
Q ss_pred ecCCccccCHHHHHHHHHHHHHhCCCCCceeE---EEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 250 IPDTVGITMPTEFGKLIADIKANTPGIENVVI---STHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 250 L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i---~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
. |...|+++.++ |+..++ +..+ |+-. .-++. .++++||+.+
T Consensus 156 ~----~at~~~e~~~i----r~~~~~--~~~iv~PGI~~------~g~~p-~~~~aGad~i 199 (228)
T 3m47_A 156 G----PSTRPERLSRL----REIIGQ--DSFLISPGVGA------QGGDP-GETLRFADAI 199 (228)
T ss_dssp C----CSSCHHHHHHH----HHHHCS--SSEEEECC----------------CGGGTCSEE
T ss_pred E----CCCChHHHHHH----HHhcCC--CCEEEecCcCc------CCCCH-hHHHcCCCEE
Confidence 2 44467776544 443332 1111 1111 11244 8899999875
No 177
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=86.60 E-value=1.9 Score=44.72 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=52.6
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeec--CC---ccccCHHHHHHH---HHHHHHhCCCCCceeEEEecCCCcchHHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIP--DT---VGITMPTEFGKL---IADIKANTPGIENVVISTHCQNDLGLSTA 294 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~--DT---vG~~~P~~v~~l---i~~l~~~~~~~~~v~i~~H~HND~GlAvA 294 (620)
|++++ +.+.+.+.++...+.||+.|-+. -| ......+|+.++ |+.+++.+| +++|++=+=+ ..
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~---~vpISIDT~~-----~~ 128 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP---DQLISVDTWR-----AQ 128 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST---TCEEEEECSC-----HH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC---CCeEEEeCCC-----HH
Confidence 56654 67889999999999999998876 22 224446677666 677777765 3789885443 34
Q ss_pred HHHHHHHhcCcEEeeccc
Q 007056 295 NTIAGACAGARQVEVTIN 312 (620)
Q Consensus 295 NslaAv~aGA~~Vd~Ti~ 312 (620)
-+.+|+++||+.|+-.-.
T Consensus 129 VaeaAl~aGa~iINDVsg 146 (318)
T 2vp8_A 129 VAKAACAAGADLINDTWG 146 (318)
T ss_dssp HHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHhCCCEEEECCC
Confidence 457889999999965433
No 178
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.56 E-value=4.7 Score=41.74 Aligned_cols=130 Identities=16% Similarity=0.101 Sum_probs=83.3
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhC------CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHc
Q 007056 170 KYAKRPRIHTFIATSGIHMEHKLR------KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 170 ~~ag~~~v~i~~~~Sd~h~~~~l~------~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~a 243 (620)
..+|++.|.+- .|-+-+ ..+| .|.+|++..+..+.+-.++ . .|..+.+.++- +++.+.+.++.++++
T Consensus 56 e~aGfdai~vs--~~~~a~-~~lG~pD~~~vt~~em~~~~~~I~r~~~~--~-PviaD~d~Gyg-~~~~v~~tv~~l~~a 128 (318)
T 1zlp_A 56 EKTGFHAAFVS--GYSVSA-AMLGLPDFGLLTTTEVVEATRRITAAAPN--L-CVVVDGDTGGG-GPLNVQRFIRELISA 128 (318)
T ss_dssp HHTTCSEEEEC--HHHHHH-HHHCCCSSSCSCHHHHHHHHHHHHHHSSS--S-EEEEECTTCSS-SHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEEC--cHHHhh-HhcCCCCCCCCCHHHHHHHHHHHHhhccC--C-CEEEeCCCCCC-CHHHHHHHHHHHHHc
Confidence 34688876442 211111 2233 5788888877766654432 3 47888876654 899999999999999
Q ss_pred CCcEEeecCCcc-----------ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCc----chHHHHHHHHHHhcCcEE
Q 007056 244 GATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDL----GLSTANTIAGACAGARQV 307 (620)
Q Consensus 244 Ga~~I~L~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~----GlAvANslaAv~aGA~~V 307 (620)
|+..|.|-|.++ ....+++.+.|+.+++..... +..|-.-+-... --++.-+.+..+|||+.|
T Consensus 129 Gaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~-~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i 206 (318)
T 1zlp_A 129 GAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDS-DFFLVARTDARAPHGLEEGIRRANLYKEAGADAT 206 (318)
T ss_dssp TCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTS-CCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccC-CcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 999999999974 344456667888777653211 233333321111 136667778888888876
No 179
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=86.55 E-value=10 Score=38.81 Aligned_cols=205 Identities=8% Similarity=-0.031 Sum_probs=117.7
Q ss_pred HHHHhHcCCCEEEEe-c--------CCCC----hhHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHHH
Q 007056 104 ARQLAKLGVDIIEAG-F--------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTAW 166 (620)
Q Consensus 104 a~~L~~~Gvd~IEvG-f--------P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a~ 166 (620)
++.++++|++.|=+| + |... .+..+.++.|++.... |.++- |+ ....+.+..
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~---------PviaD~d~Gyg--~~~~v~~~v 100 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDV---------PILLDADTGYG--NFNNARRLV 100 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSS---------CEEEECCSSCS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCC---------CEEecCCCCCC--CHHHHHHHH
Confidence 667788899999887 2 2111 1223556666664221 32322 33 334455555
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC--CCCHHHHHHHHHH
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLR-----KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGE 239 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~-----~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~--r~d~e~l~~~~~~ 239 (620)
..+..+|+..|++-...++-.+-+--+ .+.+|..++++.+++....-++. |.--. |+. ....+.+++-+++
T Consensus 101 ~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~-i~aRt-da~~a~~g~~~ai~Ra~a 178 (295)
T 1s2w_A 101 RKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFC-IVARV-EAFIAGWGLDEALKRAEA 178 (295)
T ss_dssp HHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCE-EEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcE-EEEee-hHHhccccHHHHHHHHHH
Confidence 556678999999988876433222111 46677777776665544332331 22211 221 2346888899999
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcC
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAG 319 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaG 319 (620)
..++|||.|.+.= |.-.++++.++.+.+...+| +-+-. ..+|.- ..-.--+.|+++|-....+ -|+-
T Consensus 179 y~eAGAd~i~~e~--~~~~~~~~~~i~~~~~~~~P------~i~~~-~~~~~~--~~~eL~~lGv~~v~~~~~~--~raa 245 (295)
T 1s2w_A 179 YRNAGADAILMHS--KKADPSDIEAFMKAWNNQGP------VVIVP-TKYYKT--PTDHFRDMGVSMVIWANHN--LRAS 245 (295)
T ss_dssp HHHTTCSEEEECC--CSSSSHHHHHHHHHHTTCSC------EEECC-STTTTS--CHHHHHHHTCCEEEECSHH--HHHH
T ss_pred HHHcCCCEEEEcC--CCCCHHHHHHHHHHcCCCCC------EEEeC-CCCCCC--CHHHHHHcCCcEEEEChHH--HHHH
Confidence 9999999999851 34557888888887764344 32211 112221 1345556799998554443 3677
Q ss_pred cccHHHHHHHHHhcc
Q 007056 320 NASLEEVVMAFKCRG 334 (620)
Q Consensus 320 Na~lEevv~~L~~~~ 334 (620)
+..+++++..|...|
T Consensus 246 ~~a~~~~~~~i~~~g 260 (295)
T 1s2w_A 246 VSAIQQTTKQIYDDQ 260 (295)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 788888888887755
No 180
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=86.54 E-value=7.2 Score=40.86 Aligned_cols=141 Identities=15% Similarity=0.185 Sum_probs=86.0
Q ss_pred HHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecC
Q 007056 104 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIAT 183 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~ 183 (620)
++.|.++|++.+-+|+. .-+++..++.+++. + .|.|..-+.+..++|+.|++.+...|.+ |.+.-.+
T Consensus 104 vd~l~~~~v~~~KI~S~--~~~N~pLL~~va~~-g---------KPviLstGmstl~Ei~~Ave~i~~~g~~-viLlhC~ 170 (350)
T 3g8r_A 104 VDLIEAHGIEIIKIASC--SFTDWPLLERIARS-D---------KPVVASTAGARREDIDKVVSFMLHRGKD-LTIMHCV 170 (350)
T ss_dssp HHHHHHTTCCEEEECSS--STTCHHHHHHHHTS-C---------SCEEEECTTCCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred HHHHHHcCCCEEEECcc--cccCHHHHHHHHhh-C---------CcEEEECCCCCHHHHHHHHHHHHHcCCC-EEEEecC
Confidence 44556667777777654 33567788887763 1 2678888888999999999998877765 4442122
Q ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEE---------eecC
Q 007056 184 SGIHMEHKLRKTKQQVVEIARSMVKFARS-L-GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL---------NIPD 252 (620)
Q Consensus 184 Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~-~-G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I---------~L~D 252 (620)
|. +-..+ +.++ ..++..+++ . ++. |-||-=..+... .+..+++.+||+.| ..+|
T Consensus 171 s~------YPt~~-~~~n--L~aI~~Lk~~fp~lp-VG~SdHt~g~~~-----~~~~AAvAlGA~vIEkH~tldr~~g~D 235 (350)
T 3g8r_A 171 AE------YPTPD-DHLH--LARIKTLRQQYAGVR-IGYSTHEDPDLM-----EPIMLAVAQGATVFEKHVGLPTDQYGI 235 (350)
T ss_dssp CC------SSCCG-GGCC--TTHHHHHHHHCTTSE-EEEEECCCSSCC-----HHHHHHHHTTCCEEEEEBCCCBTTBCC
T ss_pred CC------CCCCc-ccCC--HHHHHHHHHHCCCCC-EEcCCCCCCCcc-----HHHHHHHHcCCCEEEEecCcccCCCCc
Confidence 21 11111 1111 134555555 4 453 766521111111 34557888999644 2455
Q ss_pred CccccCHHHHHHHHHHHHHh
Q 007056 253 TVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 253 TvG~~~P~~v~~li~~l~~~ 272 (620)
.-=.++|+++.++++.++.-
T Consensus 236 ~~~Sl~P~ef~~lv~~ir~i 255 (350)
T 3g8r_A 236 NNYSANPEQVRRWLAAAARA 255 (350)
T ss_dssp CTTCBCHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHH
Confidence 55678999999999999863
No 181
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.47 E-value=2 Score=44.06 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=56.0
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeec--CC----ccccCHHHHHHHH---HHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIP--DT----VGITMPTEFGKLI---ADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~--DT----vG~~~P~~v~~li---~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
|+++. +++.+.+.++...+.||+.|-+. -| ......+++.+++ +.+++.+ +++|++.+.+ .
T Consensus 55 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~----~vpiSIDT~~-----~ 125 (297)
T 1tx2_A 55 DGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV----KLPISIDTYK-----A 125 (297)
T ss_dssp SSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----CSCEEEECSC-----H
T ss_pred cCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----CceEEEeCCC-----H
Confidence 45544 57888899999999999998876 22 2334467777666 6666655 3789998875 4
Q ss_pred HHHHHHHHhcCcEEeec
Q 007056 294 ANTIAGACAGARQVEVT 310 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~T 310 (620)
.-..+|+++|++.|+-.
T Consensus 126 ~V~~aAl~aGa~iINdv 142 (297)
T 1tx2_A 126 EVAKQAIEAGAHIINDI 142 (297)
T ss_dssp HHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 55678888999999543
No 182
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.46 E-value=6.6 Score=40.10 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-------------ccCHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-------------ITMPT 260 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-------------~~~P~ 260 (620)
.|.+|++..+....+- .... |..+.+.++- +++.+.+.++.+.++|+..|.|-|.++ ....+
T Consensus 58 vt~~em~~~~~~I~~~---~~~P-viaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~ 132 (290)
T 2hjp_A 58 LSMSTHLEMMRAIAST---VSIP-LIADIDTGFG-NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIE 132 (290)
T ss_dssp SCHHHHHHHHHHHHTT---CSSC-EEEECTTTTS-SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHH
T ss_pred CCHHHHHHHHHHHHhc---CCCC-EEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHH
Confidence 5678877766654432 2344 7788876754 899999999999999999999999973 33344
Q ss_pred HHHHHHHHHHHhCCCCCceeEEEecCCC-----cchHHHHHHHHHHhcCcEE
Q 007056 261 EFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQV 307 (620)
Q Consensus 261 ~v~~li~~l~~~~~~~~~v~i~~H~HND-----~GlAvANslaAv~aGA~~V 307 (620)
++.+.|+.+++.-... +..|-.-+-.. +--++.-+.+..+|||+.|
T Consensus 133 e~~~kI~Aa~~a~~~~-~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i 183 (290)
T 2hjp_A 133 EFQGKIAAATAARADR-DFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAI 183 (290)
T ss_dssp HHHHHHHHHHHHCSST-TSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcccC-CcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEE
Confidence 6777888777653211 23333333222 2345566667777777765
No 183
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.32 E-value=19 Score=36.88 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=115.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+. +.++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~-st~~ai~la~ 100 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-------GRATVVAGIGY-SVDTAIELGK 100 (314)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECS-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-------CCCeEEecCCc-CHHHHHHHHH
Confidence 478888899999999999999876 3 455666665 44455555432 33578888887 5444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCc
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~ 246 (620)
. ...+|++.+-+..|-. .+-+.++.++-..+..+ ..++.-+-|+ -.+. .+++.+.+++ +. ..
T Consensus 101 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn-~tg~-l~~~~~~~La----~~-pn 162 (314)
T 3d0c_A 101 S-AIDSGADCVMIHQPVH-------PYITDAGAVEYYRNIIE---ALDAPSIIYF-KDAH-LSDDVIKELA----PL-DK 162 (314)
T ss_dssp H-HHHTTCSEEEECCCCC-------SCCCHHHHHHHHHHHHH---HSSSCEEEEE-CCTT-SCTHHHHHHT----TC-TT
T ss_pred H-HHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEe-CCCC-cCHHHHHHHH----cC-CC
Confidence 3 3567999887766532 23466666555544433 3345546677 2333 5666666554 22 57
Q ss_pred EEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHH
Q 007056 247 TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEV 326 (620)
Q Consensus 247 ~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEev 326 (620)
.+.+.||.|- ..++.++++. .++..+..+ +-+.++ -..+.++..|++. .+.| .+|...+.+
T Consensus 163 IvgiKdssgd--~~~~~~~~~~----~~~~~~f~v-~~G~d~-----~~~~~~l~~G~~G---~is~----~an~~P~~~ 223 (314)
T 3d0c_A 163 LVGIKYAIND--IQRVTQVMRA----VPKSSNVAF-ICGTAE-----KWAPFFYHAGAVG---FTSG----LVNVFPQKS 223 (314)
T ss_dssp EEEEEECCCC--HHHHHHHHHH----SCGGGCCEE-EETTHH-----HHHHHHHHHTCCE---EEES----GGGTCHHHH
T ss_pred EEEEEeCCCC--HHHHHHHHHh----cCCCCCEEE-EEeCcH-----HHHHHHHHcCCCE---EEec----HHHhhHHHH
Confidence 8999999983 4555555443 331001222 222221 1567778889764 3443 456766666
Q ss_pred HHHHH
Q 007056 327 VMAFK 331 (620)
Q Consensus 327 v~~L~ 331 (620)
+...+
T Consensus 224 ~~l~~ 228 (314)
T 3d0c_A 224 FALLE 228 (314)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65444
No 184
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=86.30 E-value=2.3 Score=43.50 Aligned_cols=141 Identities=14% Similarity=0.146 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 126 DFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 126 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
.++.++++++. + .|.+.--+.. ..+++..|++.+...|.+.+++.--.+.. .+.. ..-.+.
T Consensus 121 n~~Ll~~~a~~-~---------kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~----~y~~-~~~dl~--- 182 (292)
T 1o60_A 121 QTDLVEAMAKT-G---------AVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF----GYDN-LIVDML--- 182 (292)
T ss_dssp CHHHHHHHHHT-T---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTC-EECCTT---
T ss_pred CHHHHHHHHcC-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc-cccCHH---
Confidence 45677777752 1 1555554543 77899999999888898877776543321 1110 000111
Q ss_pred HHHHHHHHc--CCCEEEEcCCCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCCccccCHHHH
Q 007056 205 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 262 (620)
Q Consensus 205 ~~v~~a~~~--G~~~V~f~~ed~----------~r~d~e~l~~~~~~~~~aGa~~I~----------L~DTvG~~~P~~v 262 (620)
.+...|+. |+. |.|++--+ +.-.++++..++.++..+||+-+. ++|-.=.+.|+++
T Consensus 183 -~i~~lk~~~~~~p-V~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l 260 (292)
T 1o60_A 183 -GFSVMKKASKGSP-VIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNPNQAKCDGPSALPLSAL 260 (292)
T ss_dssp -HHHHHHHHTTSCC-EEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESSGGGCSSCCTTCEEGGGH
T ss_pred -HHHHHHhhCCCCC-EEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCcccCCchhhcCCCHHHH
Confidence 22234554 675 88854211 012235678888899999998222 4699999999999
Q ss_pred HHHHHHHHHh------CCCCCceeEEEecCC
Q 007056 263 GKLIADIKAN------TPGIENVVISTHCQN 287 (620)
Q Consensus 263 ~~li~~l~~~------~~~~~~v~i~~H~HN 287 (620)
.++++.+++- .++. +..|+-|-|.
T Consensus 261 ~~lv~~ir~i~~a~g~~~~~-~~~~~~~~~~ 290 (292)
T 1o60_A 261 EGFVSQMKAIDDLVKSFPEL-DTSIGSHHHH 290 (292)
T ss_dssp HHHHHHHHHHHHHHHHSCCC-CC--------
T ss_pred HHHHHHHHHHHHHhCCchhc-cccccccccc
Confidence 9999988752 3443 3567777664
No 185
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.15 E-value=1.7 Score=44.50 Aligned_cols=101 Identities=11% Similarity=0.100 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ +++|-+|+ +|+.--++.-+..|-
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR--RVPVVAGVASTSVADAVAQAKLYE 96 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCBEEEEEESSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999999995 7899999999999887665 35555554 788999999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
++||+.+=..---+- + .+-++++..++
T Consensus 97 ~~Gadavlv~~P~y~-~---~~~~~l~~~f~ 123 (300)
T 3eb2_A 97 KLGADGILAILEAYF-P---LKDAQIESYFR 123 (300)
T ss_dssp HHTCSEEEEEECCSS-C---CCHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 999999866433222 1 34455555444
No 186
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=86.11 E-value=25 Score=35.42 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHHH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 167 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 167 (620)
+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pvi~Gvg~~~t~~ai~la~- 90 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-------KRIPVIAGTGSNNTAASIAMSK- 90 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHHH-
Confidence 77888889999999999999877 4 466666665 44455555432 2357888888755444 44443
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcCC
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aGa 245 (620)
....+|++.+-+..|-. .+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.+++ +. .
T Consensus 91 ~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~-p 155 (291)
T 3a5f_A 91 WAESIGVDGLLVITPYY-------NKTTQKGLVKHFKAVSD---AVSTPIIIYNVPGRTGLNITPGTLKELC----ED-K 155 (291)
T ss_dssp HHHHTTCSEEEEECCCS-------SCCCHHHHHHHC-CTGG---GCCSCEEEEECHHHHSCCCCHHHHHHHT----TS-T
T ss_pred HHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----cC-C
Confidence 33567999887766632 23466655544433322 3345545665432 3345677776664 22 5
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHH
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 325 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEe 325 (620)
..+.+.||.|- ..++.++++..... ..+ +-+++++ .+.++..|++. .+.| .+|...+.
T Consensus 156 nivgiK~s~gd--~~~~~~~~~~~~~~------f~v-~~G~d~~------~~~~l~~G~~G---~is~----~an~~P~~ 213 (291)
T 3a5f_A 156 NIVAVXEASGN--ISQIAQIKALCGDK------LDI-YSGNDDQ------IIPILALGGIG---VISV----LANVIPED 213 (291)
T ss_dssp TEEEEEECSCC--HHHHHHHHHHHGGG------SEE-EESCGGG------HHHHHHTTCCE---EEES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCC------eEE-EeCcHHH------HHHHHHCCCCE---EEec----HHHhcHHH
Confidence 78999999984 45666666554322 222 3455433 45577789764 3444 46777776
Q ss_pred HHHHHH
Q 007056 326 VVMAFK 331 (620)
Q Consensus 326 vv~~L~ 331 (620)
++...+
T Consensus 214 ~~~l~~ 219 (291)
T 3a5f_A 214 VHNMCE 219 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 187
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.04 E-value=4.2 Score=41.31 Aligned_cols=139 Identities=10% Similarity=0.070 Sum_probs=81.9
Q ss_pred cchhhHHHHHHHHhcCCCC-EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCCCCCCCCHHHH
Q 007056 157 CNERDIKTAWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFL 233 (620)
Q Consensus 157 ~~~~dI~~a~eal~~ag~~-~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~ed~~r~d~e~l 233 (620)
...++...+++.+..+|.+ .|.+-+++........++.+.+. +.+.++.+++. ++. .|-.++. .+.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~----~~~iv~~vr~~~~~Pv~vKi~~~----~~~~~~ 174 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEA----TEKLLKEVFTFFTKPLGVKLPPY----FDLVHF 174 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHH----HHHHHHHHTTTCCSCEEEEECCC----CSHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHH----HHHHHHHHHHhcCCCEEEEECCC----CCHHHH
Confidence 3556777777777778888 76664431111111123334443 45566666654 333 1233542 366778
Q ss_pred HHHHHHHHHcCCcEEeecCCcc----------------------ccCH---HHHHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 234 YEILGEVIKVGATTLNIPDTVG----------------------ITMP---TEFGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG----------------------~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
.++++.+.++|+|.|.+.+|.+ +.-| ...-++++.+++.+++ +++|-.=+
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~--~ipvi~~G--- 249 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKP--EIQIIGTG--- 249 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCT--TSEEEEES---
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCC--CCCEEEEC---
Confidence 8899999999999999988752 1111 1234678888887753 35655433
Q ss_pred cchH-HHHHHHHHHhcCcEEee
Q 007056 289 LGLS-TANTIAGACAGARQVEV 309 (620)
Q Consensus 289 ~GlA-vANslaAv~aGA~~Vd~ 309 (620)
|.. -..+..++.+||+.|..
T Consensus 250 -GI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 250 -GIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp -SCCSHHHHHHHHHHTCSEEEE
T ss_pred -CCCCHHHHHHHHHcCCCEEEE
Confidence 332 34666777889998854
No 188
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=85.91 E-value=31 Score=34.77 Aligned_cols=193 Identities=12% Similarity=0.153 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHHH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 167 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 167 (620)
+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~~ 90 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-------GRIKVIAGTGGNATHEAVHLTAH 90 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHHH
Confidence 67777889999999999998877 4 455566665 44455555432 3357888888755444 444433
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcCC
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aGa 245 (620)
...+|++.+-+..|-. .+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ +. .
T Consensus 91 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~~-p 155 (294)
T 2ehh_A 91 -AKEVGADGALVVVPYY-------NKPTQRGLYEHFKTVAQ---EVDIPIIIYNIPSRTCVEISVDTMFKLAS---EC-E 155 (294)
T ss_dssp -HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSCCCCHHHHHHHHH---HC-T
T ss_pred -HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCCcccCcCCCHHHHHHHHh---hC-C
Confidence 3567999887766632 24566776665554443 3345545665432 34567787777753 22 5
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHH
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 325 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEe 325 (620)
..+.+.||.|- ..++.++++.. ++ +..+ +-++++ ..+.++..|++.+ +.| .+|...+.
T Consensus 156 nivgiKds~gd--~~~~~~~~~~~----~~--~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~an~~P~~ 213 (294)
T 2ehh_A 156 NIVASKESTPN--MDRISEIVKRL----GE--SFSV-LSGDDS------LTLPMMALGAKGV---ISV----ANNVMPRE 213 (294)
T ss_dssp TEEEEEECCSC--HHHHHHHHHHH----CT--TSEE-EESSGG------GHHHHHHTTCCEE---EES----GGGTCHHH
T ss_pred CEEEEEeCCCC--HHHHHHHHHhc----CC--CeEE-EECcHH------HHHHHHHCCCCEE---EeC----HHHhhHHH
Confidence 78999999984 45555555443 32 2223 334443 2556777897643 444 46777766
Q ss_pred HHHHHH
Q 007056 326 VVMAFK 331 (620)
Q Consensus 326 vv~~L~ 331 (620)
++...+
T Consensus 214 ~~~l~~ 219 (294)
T 2ehh_A 214 VKELIR 219 (294)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665444
No 189
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=85.89 E-value=27 Score=34.98 Aligned_cols=161 Identities=11% Similarity=0.115 Sum_probs=97.9
Q ss_pred CCCCHHHHHHHHHHHhHc--CCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc--cc----hhhHHH
Q 007056 93 ATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--CN----ERDIKT 164 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~--Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~~----~~dI~~ 164 (620)
...|.++..++.+...+. |+..+-+ +|... ..+++..+.. .. . . ..+..+.+|-. .. ...++.
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV-~p~~v----~~a~~~L~~~-g~-~-~-v~v~tVigFP~G~~~~~~Kv~E~~~ 93 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICI-YPRFI----PIARKTLKEQ-GT-P-E-IRIATVTNFPHGNDDIDIALAETRA 93 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEEC-CGGGH----HHHHHHHHHT-TC-T-T-SEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEE-CHHHH----HHHHHHhhhc-CC-C-C-ceEEEEeCCCCCCCcHHHHHHHHHH
Confidence 345889999999988888 8888876 45422 2222211100 11 0 0 01122334311 11 122334
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG 244 (620)
|++. |.+.|.+++....+ .....+++.+.+.+.++.+.+.|.. +-+-.|...-++.+.+...++.+.++|
T Consensus 94 Av~~----GAdEIDmVinig~l-----~~g~~~~v~~ei~~v~~a~~~~g~~-lKvIlEt~~L~d~e~i~~a~~ia~eaG 163 (260)
T 1p1x_A 94 AIAY----GADEVDVVFPYRAL-----MAGNEQVGFDLVKACKEACAAANVL-LKVIIETGELKDEALIRKASEISIKAG 163 (260)
T ss_dssp HHHH----TCSEEEEECCHHHH-----HTTCCHHHHHHHHHHHHHHHHTTCE-EEEECCHHHHCSHHHHHHHHHHHHHTT
T ss_pred HHHc----CCCEEEEeccHHhh-----hCCCHHHHHHHHHHHHHHhcccCCe-EEEEEecccCCcHHHHHHHHHHHHHhC
Confidence 4443 89999998865421 2344578888888888888876652 333344444577777889999999999
Q ss_pred CcEEeecC--CccccCHHHHHHHHHHHHHh
Q 007056 245 ATTLNIPD--TVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 245 a~~I~L~D--TvG~~~P~~v~~li~~l~~~ 272 (620)
||.|--.- +.|.++|+.+.-+-+.+++.
T Consensus 164 ADfVKTSTGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 164 ADFIKTSTGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 99887552 23567999888776666654
No 190
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.87 E-value=34 Score=35.08 Aligned_cols=196 Identities=16% Similarity=0.163 Sum_probs=114.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 100 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-------PDFPIMAGVGAHSTRQVLEHIN 100 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-------TTSCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 478888899999999999998766 3 355566665 34455555432 3357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhC--CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC---CCCCCHHHHHHHHHHHH
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLR--KTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILGEVI 241 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~--~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed---~~r~d~e~l~~~~~~~~ 241 (620)
. ...+|++.+-+..|.. ++ .+.++.++-..+..+ ..++.-+-|+... +...+++.+.++++
T Consensus 101 ~-a~~~Gadavlv~~P~y-------~~kp~~~~~l~~~f~~ia~---a~~lPiilYn~P~~t~g~~l~~~~~~~La~--- 166 (318)
T 3qfe_A 101 D-ASVAGANYVLVLPPAY-------FGKATTPPVIKSFFDDVSC---QSPLPVVIYNFPGVCNGIDLDSDMITTIAR--- 166 (318)
T ss_dssp H-HHHHTCSEEEECCCCC----------CCCHHHHHHHHHHHHH---HCSSCEEEEECCC----CCCCHHHHHHHHH---
T ss_pred H-HHHcCCCEEEEeCCcc-------cCCCCCHHHHHHHHHHHHh---hCCCCEEEEeCCcccCCCCCCHHHHHHHHh---
Confidence 3 3456999887765532 12 355666655554444 2345545675543 23456676665543
Q ss_pred HcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcc
Q 007056 242 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 321 (620)
Q Consensus 242 ~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa 321 (620)
+. ...+.+.||.| ...++.++++.+. ++ +.. -+-+++++ .+.++..|++.+ +.| .+|.
T Consensus 167 ~~-pnIvgiKdssg--d~~~~~~~~~~~~---~~--~f~-v~~G~d~~------~l~~l~~G~~G~---is~----~an~ 224 (318)
T 3qfe_A 167 KN-PNVVGVKLTCA--SVGKITRLAATLP---PA--AFS-VFGGQSDF------LIGGLSVGSAGC---IAA----FANV 224 (318)
T ss_dssp HC-TTEEEEEESSC--CHHHHHHHHHHSC---GG--GCE-EEESCGGG------HHHHHHTTCCEE---ECG----GGGT
T ss_pred hC-CCEEEEEeCCC--CHHHHHHHHHhcC---CC--CEE-EEEecHHH------HHHHHHCCCCEE---Eec----HHHh
Confidence 13 47999999988 3455555554332 11 111 22344432 357788898643 443 4677
Q ss_pred cHHHHHHHHHh
Q 007056 322 SLEEVVMAFKC 332 (620)
Q Consensus 322 ~lEevv~~L~~ 332 (620)
.-+.++...+.
T Consensus 225 ~P~~~~~l~~a 235 (318)
T 3qfe_A 225 FPKTVSKIYEL 235 (318)
T ss_dssp CHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 77776655553
No 191
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.82 E-value=5.5 Score=41.85 Aligned_cols=129 Identities=14% Similarity=0.122 Sum_probs=81.6
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--EEEEcCCCC------CCC
Q 007056 168 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA------GRS 228 (620)
Q Consensus 168 al~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~--~V~f~~ed~------~r~ 228 (620)
..+.+|.+.|.+-.+. |+. ++...++-+.++-.+.+.+.++.+|+. |-+ .|.+++.+. ...
T Consensus 169 ~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~ 248 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPN 248 (364)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTT
T ss_pred HHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCC
Confidence 3456899999986653 121 112235556777777788888877764 311 245577531 244
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCCc---cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-C
Q 007056 229 DRKFLYEILGEVIKVGATTLNIPDTV---GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 304 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~DTv---G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 304 (620)
+.+...++++.+.++|++.|.+.... +...|. ++++.+++.++ ++|..=.- . -..++..+++.| |
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~v~~~~~----iPvi~~Gg--i--t~~~a~~~l~~g~a 317 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKPYSE---AFRQKVRERFH----GVIIGAGA--Y--TAEKAEDLIGKGLI 317 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCC----SEEEEESS--C--CHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccH---HHHHHHHHHCC----CCEEEECC--c--CHHHHHHHHHCCCc
Confidence 67778899999999999999887521 011232 46777888774 44443221 2 267788888888 7
Q ss_pred cEE
Q 007056 305 RQV 307 (620)
Q Consensus 305 ~~V 307 (620)
+.|
T Consensus 318 D~V 320 (364)
T 1vyr_A 318 DAV 320 (364)
T ss_dssp SEE
T ss_pred cEE
Confidence 776
No 192
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.61 E-value=6.7 Score=39.24 Aligned_cols=177 Identities=16% Similarity=0.140 Sum_probs=98.4
Q ss_pred HHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHH
Q 007056 103 IARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 165 (620)
Q Consensus 103 Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 165 (620)
-++.++++|||.|=+|. |...+ +....++.+++.... |.++- |+... .+.+
T Consensus 32 sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------pviaD~~~Gyg~~~---~~~~ 99 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSI---------PVSVDVESGYGLSP---ADLI 99 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSS---------CEEEECTTCTTCCH---HHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCC---------CEEeccCCCcCcHH---HHHH
Confidence 36778889999998872 32111 224566666664321 22322 22111 3333
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCC---CCC----CHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDA---GRS----DRKFLYEIL 237 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~---~r~----d~e~l~~~~ 237 (620)
.+.+ .+|+..|++-... |...+-=.+.+|..++++.+++.+++.|... .... .|. ++. ..+.+++-+
T Consensus 100 ~~l~-~aGa~gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~-~v~aRtd~~~~g~~~~~~~~~~ai~ra 174 (255)
T 2qiw_A 100 AQIL-EAGAVGINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDV-VINGRTDAVKLGADVFEDPMVEAIKRI 174 (255)
T ss_dssp HHHH-HTTCCEEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCC-EEEEEECHHHHCTTTSSSHHHHHHHHH
T ss_pred HHHH-HcCCcEEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCe-EEEEEechhhccCCcchHHHHHHHHHH
Confidence 3333 4799999997664 3322212467888899888888888778752 2221 121 222 257888888
Q ss_pred HHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcc-hHHHHHHHHHHhcCcEEe
Q 007056 238 GEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLG-LSTANTIAGACAGARQVE 308 (620)
Q Consensus 238 ~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~G-lAvANslaAv~aGA~~Vd 308 (620)
++..++||+.|.+. |.-.++++.++ .+.++ +|+-+-+... + .-.-..-.--+.|+++|-
T Consensus 175 ~a~~eAGAd~i~~e---~~~~~~~~~~i----~~~~~----~P~n~~~~~~-~~~p~~~~~eL~~lGv~~v~ 234 (255)
T 2qiw_A 175 KLMEQAGARSVYPV---GLSTAEQVERL----VDAVS----VPVNITAHPV-DGHGAGDLATLAGLGVRRVT 234 (255)
T ss_dssp HHHHHHTCSEEEEC---CCCSHHHHHHH----HTTCS----SCBEEECBTT-TBBTTBCHHHHHHTTCCEEE
T ss_pred HHHHHcCCcEEEEc---CCCCHHHHHHH----HHhCC----CCEEEEecCC-CCCCCCCHHHHHHcCCCEEE
Confidence 89999999999985 33334555444 44443 2333333322 1 001122344566877773
No 193
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=85.49 E-value=3.3 Score=41.34 Aligned_cols=154 Identities=14% Similarity=0.119 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHhHcC--CCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe-ec-cc-chhhHHHHHHHH
Q 007056 95 LTSKEKLDIARQLAKLG--VDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LS-RC-NERDIKTAWEAV 169 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~G--vd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~-r~-~~~dI~~a~eal 169 (620)
|+... +-..|.-+| ||.+=.||-.+.-.+.+.+++..+..... +..+-.-+ |. .+ ...-++.-++..
T Consensus 23 lg~~~---~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~-----gV~v~~GGTl~E~~~~qg~~~~yl~~~ 94 (251)
T 1qwg_A 23 LPPKF---VEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDW-----GIKVYPGGTLFEYAYSKGKFDEFLNEC 94 (251)
T ss_dssp CCHHH---HHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTT-----TCEEEECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHH---HHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHc-----CCeEECCcHHHHHHHHcCcHHHHHHHH
Confidence 56444 334444555 89999998655444445666655532111 11111111 00 00 012344445555
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE--cC---CCCCCCCHHHHHHHHHHHHHcC
Q 007056 170 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SP---EDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 170 ~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f--~~---ed~~r~d~e~l~~~~~~~~~aG 244 (620)
+..|.+.|.+...+-+ ++.+ .-.+.|+.+++.|+. |-+ +- +.....+++.+.+.++.-.++|
T Consensus 95 k~lGf~~iEiS~G~i~--------l~~~----~~~~~I~~~~~~G~~-v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 95 EKLGFEAVEISDGSSD--------ISLE----ERNNAIKRAKDNGFM-VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp HHHTCCEEEECCSSSC--------CCHH----HHHHHHHHHHHTTCE-EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEECCCccc--------CCHH----HHHHHHHHHHHCCCE-EeeeccccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 6669999998766543 3433 345688999999985 533 32 2235678999999999999999
Q ss_pred CcEE-----------eecCCccccCHHHHHHHHHHH
Q 007056 245 ATTL-----------NIPDTVGITMPTEFGKLIADI 269 (620)
Q Consensus 245 a~~I-----------~L~DTvG~~~P~~v~~li~~l 269 (620)
|+.| .|+|..|-.....+.++++.+
T Consensus 162 A~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l 197 (251)
T 1qwg_A 162 ADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNV 197 (251)
T ss_dssp CSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTS
T ss_pred CcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhC
Confidence 9754 667788888877776665543
No 194
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=85.46 E-value=25 Score=38.67 Aligned_cols=159 Identities=20% Similarity=0.186 Sum_probs=105.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|.+++..|.+.-.+.|+|+|=+.|.. +++|...+|++.+..+.. ..|.+-. -+.+.++..-+-+..
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~~~~--------~~iiaKI-E~~eav~nldeIl~~-- 271 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFVQ-SADDVRYIRGLLGPRGRH--------IRIIPKI-ENVEGLVNFDEILAE-- 271 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTCC-SHHHHHHHHHHHTGGGTT--------CEEEEEE-CSHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCC--------CeEEEEE-CCHHHHHhHHHHHHh--
Confidence 4788999888777889999999998874 788888888776543221 1222211 123333322121221
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. ++++-.|+=++ ...+++.....++++.|+..|.. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 272 sDg--imVaRGDLgve----i~~e~v~~~qk~ii~~~~~~gkp-vi~ATQmLeSMi~~p~PTRAEvsDVAnAV~d-GaDa 343 (511)
T 3gg8_A 272 ADG--IMIARGDLGME----IPPEKVFLAQKMMIAKCNVVGKP-VITATQMLESMIKNPRPTRAEAADVANAVLD-GTDC 343 (511)
T ss_dssp CSC--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHTTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCe--EEEecchhcCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 233 44555554443 35688888889999999999976 555 2324445667888888888764 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
+-|. .|.-.-.|.+.-+.+..+...
T Consensus 344 vMLSgETA~G~yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 344 VMLSGETANGEFPVITVETMARICYE 369 (511)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHH
Confidence 9995 677778998887777777654
No 195
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=85.42 E-value=16 Score=36.91 Aligned_cols=201 Identities=14% Similarity=0.036 Sum_probs=119.9
Q ss_pred HHHHhHcCCCEEEEe-c--------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEeeccc---chhhHHHHHH
Q 007056 104 ARQLAKLGVDIIEAG-F--------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC---NERDIKTAWE 167 (620)
Q Consensus 104 a~~L~~~Gvd~IEvG-f--------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~---~~~dI~~a~e 167 (620)
++.++++||+.|=+| + |...+ +....++.|++.... |.++-.--. ....+-+...
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~---------pviaD~d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAI---------PVNADIEAGYGHAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSS---------CEEEECTTCSSSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCC---------CEEeecCCCCCCCHHHHHHHHH
Confidence 667788999999887 2 32222 224566777664321 333322111 2344444445
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC--------CHHHHHHHHHH
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS--------DRKFLYEILGE 239 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~--------d~e~l~~~~~~ 239 (620)
.+..+|+..|++-.... | ..+-=.+.+|..++++.+++.+++.|.+.+...=.|+.-. ..+.+++-+++
T Consensus 100 ~l~~aGaagv~iED~~~--~-~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~a 176 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATG--L-TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQA 176 (275)
T ss_dssp HHHHTTCSEEEEECBCS--S-SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcC--C-CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHH
Confidence 55568999999988765 2 1111147888899988888888877876322211133211 25778888888
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcC
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAG 319 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaG 319 (620)
..++|||.|.+.= .-.++++.++.+.+ + +|+-+-+.. + .-..-.--+.|+++|-.... +-|+-
T Consensus 177 y~eAGAd~i~~e~---~~~~~~~~~i~~~~----~----~P~n~~~~~--~--~~~~~eL~~lGv~~v~~~~~--~~raa 239 (275)
T 2ze3_A 177 YADAGADGIFVPL---ALQSQDIRALADAL----R----VPLNVMAFP--G--SPVPRALLDAGAARVSFGQS--LMLAT 239 (275)
T ss_dssp HHHTTCSEEECTT---CCCHHHHHHHHHHC----S----SCEEEECCT--T--SCCHHHHHHTTCSEEECTTH--HHHHH
T ss_pred HHHCCCCEEEECC---CCCHHHHHHHHHhc----C----CCEEEecCC--C--CCCHHHHHHcCCcEEEEChH--HHHHH
Confidence 9999999999754 34456666655544 2 234333432 1 12234556779999854333 24677
Q ss_pred cccHHHHHHHHHhc
Q 007056 320 NASLEEVVMAFKCR 333 (620)
Q Consensus 320 Na~lEevv~~L~~~ 333 (620)
+.++++++..|...
T Consensus 240 ~~a~~~~~~~i~~~ 253 (275)
T 2ze3_A 240 LGLVQRMAAELHAA 253 (275)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77888888777763
No 196
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.41 E-value=6.8 Score=40.71 Aligned_cols=132 Identities=14% Similarity=0.032 Sum_probs=82.2
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCCCC--CCCCHHHHH
Q 007056 169 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDA--GRSDRKFLY 234 (620)
Q Consensus 169 l~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~ed~--~r~d~e~l~ 234 (620)
.+.+|.+.|.+-.+. |+. ++...+|-+.+.-.+.+.+.++.+|+. .+. .|.+++.|. ...+.+...
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~ 232 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYV 232 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHH
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHH
Confidence 456799998887763 332 223345667777777777777777765 222 356677542 124567788
Q ss_pred HHHHHHHHcCCcEEeecCC--ccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcEE
Q 007056 235 EILGEVIKVGATTLNIPDT--VGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 307 (620)
Q Consensus 235 ~~~~~~~~aGa~~I~L~DT--vG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 307 (620)
++++.+.++|+|.|.+.+. ... ..|....++++.+++.+. ++|..=.-- .-...+..+++.| |+.|
T Consensus 233 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~----iPVi~~GgI---~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD----IPTGAVGLI---TSGWQAEEILQNGRADLV 304 (340)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT----CCEEEESSC---CCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC----CcEEeeCCC---CCHHHHHHHHHCCCeeEE
Confidence 9999999999999998652 110 112223467788888763 344332211 0245667788888 7766
No 197
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=85.41 E-value=23 Score=35.98 Aligned_cols=219 Identities=13% Similarity=0.091 Sum_probs=114.0
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHc--CCCEEEEecCCCChhHHHHHH-HHHHHhcccccccCCccceEEee
Q 007056 78 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVR-TIAKEVGNAVDAESGYVPVICGL 154 (620)
Q Consensus 78 ~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~--Gvd~IEvGfP~~s~~d~e~v~-~i~~~~~~~~~~~~~l~~~i~~~ 154 (620)
..+|-|+= +...|.++..++.+...+- |+..+-+ +|...+ .++ .+... .... . ..+..+.+|
T Consensus 34 ~~IDhTlL------~p~~T~~dI~~lc~eA~~~~~~~aaVCV-~p~~V~----~a~~~L~~~--gs~~-~-v~v~tVigF 98 (281)
T 2a4a_A 34 CLTDHTFL------DENGTEDDIRELCNESVKTCPFAAAVCV-YPKFVK----FINEKIKQE--INPF-K-PKIACVINF 98 (281)
T ss_dssp TTEEEECC------CTTCCHHHHHHHHHHHHSSSSCCSEEEE-CGGGHH----HHHHHHHHH--SSSC-C-SEEEEEEST
T ss_pred HHcchhcC------CCCCCHHHHHHHHHHHHhccCCccEEEE-CHHHHH----HHHHHhhcc--CCCC-C-ceEEEEeCC
Confidence 45666653 2345899999999999999 9999987 554322 222 22211 1100 0 011223343
Q ss_pred cc--cc----hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHH---HHHHHHHHHHHHHHHcCCCEEEEcCCCC
Q 007056 155 SR--CN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ---QVVEIARSMVKFARSLGCDDVEFSPEDA 225 (620)
Q Consensus 155 ~r--~~----~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~e---e~l~~~~~~v~~a~~~G~~~V~f~~ed~ 225 (620)
=. .. ...++.|++. |++.|.+++....+.. ...+ ++.+.+.+.++.+.. . .+-+-.|..
T Consensus 99 P~G~~~~~~Kv~E~~~Av~~----GAdEIDmVinig~lks-----g~~~~~~~v~~eI~~v~~a~~~--~-~lKVIlEt~ 166 (281)
T 2a4a_A 99 PYGTDSMEKVLNDTEKALDD----GADEIDLVINYKKIIE-----NTDEGLKEATKLTQSVKKLLTN--K-ILKVIIEVG 166 (281)
T ss_dssp TTCCSCHHHHHHHHHHHHHH----TCSEEEEECCHHHHHH-----SHHHHHHHHHHHHHHHHTTCTT--S-EEEEECCHH
T ss_pred CCCCCCHHHHHHHHHHHHHc----CCCEEEEecchHhhhC-----CChhHHHHHHHHHHHHHHHhcC--C-ceEEEEecc
Confidence 11 11 1233444443 9999999886543211 1223 555555555554432 2 233333444
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecC--CccccCHHHHHHHHHHHHHh------CCCCCceeEEEecCCCcchHHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKAN------TPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~D--TvG~~~P~~v~~li~~l~~~------~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
.-++.+.+...++.+.++|||.|--.- +.|.++|+.+.-+-+.+++. .++.-.+..+==.+ ++--+++-..
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIr-t~e~al~~i~ 245 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGIS-DLNTASHYIL 245 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCC-SHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCC-CHHHHHHHHH
Confidence 457777788999999999999888552 33678999888777766532 12100122221112 3333333222
Q ss_pred HHH-HhcCcEEeeccccccCCcCcccHH
Q 007056 298 AGA-CAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 298 aAv-~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
++. ..|.+|++-...=||...|-.+|+
T Consensus 246 aga~~lG~~w~~~~~~RiGtSs~~~~l~ 273 (281)
T 2a4a_A 246 LARRFLSSLACHPDNFRIGSSSLVIKLR 273 (281)
T ss_dssp HHHHHTC------CCEEEEESSHHHHHH
T ss_pred HhhhhccccccccCceEEecCccHHHHH
Confidence 222 246677777777777766655554
No 198
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=85.14 E-value=1.7 Score=44.71 Aligned_cols=126 Identities=14% Similarity=0.192 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 126 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 126 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
.++.++.+++. + .|.+.--+. +..+++..+++.+...|.+.|.+.--.+.. .... ..++ .
T Consensus 144 n~~LLr~va~~-g---------kPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y------~~~~-~~vd--l 204 (298)
T 3fs2_A 144 QTDLLIAAART-G---------RVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSF------GYNT-LVSD--M 204 (298)
T ss_dssp CHHHHHHHHHT-T---------SEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEEC------SSSC-EECC--T
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC------CCCC-CccC--H
Confidence 45667776652 1 145544444 478899999999988888777665332211 1000 0000 0
Q ss_pred HHHHHHHHcCCCEEEEcCCCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eecCCccccCHHHHHH
Q 007056 205 SMVKFARSLGCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTEFGK 264 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f~~ed~----------~r~d~e~l~~~~~~~~~aGa~~I----------~L~DTvG~~~P~~v~~ 264 (620)
.++...|+.++. |.|++--. +--.++++..+..+++.+||+-+ .++|--=.++|+++.+
T Consensus 205 ~~i~~lk~~~~P-V~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~ 283 (298)
T 3fs2_A 205 RALPIMAGLGAP-VIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPA 283 (298)
T ss_dssp THHHHHHTTTSC-EEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHH
T ss_pred HHHHHHHHcCCc-EEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHHHH
Confidence 124444556775 87844211 12346889999999999999833 3478888999999999
Q ss_pred HHHHHHH
Q 007056 265 LIADIKA 271 (620)
Q Consensus 265 li~~l~~ 271 (620)
+++.+++
T Consensus 284 lv~~ir~ 290 (298)
T 3fs2_A 284 LLEKLMA 290 (298)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999886
No 199
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=84.93 E-value=3.2 Score=40.78 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=51.5
Q ss_pred HHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc
Q 007056 237 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 314 (620)
Q Consensus 237 ~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl 314 (620)
++.+.++|||.|.| |+.....|..+.++++.+++. + +.+..=+|+ ...+..|.++||+.|=+++.|+
T Consensus 94 i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g---~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 94 VDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--G---LLAMADCST-----VNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--T---CEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--C---CEEEEecCC-----HHHHHHHHhCCCCEEEecCccC
Confidence 45677899998854 777777898999999999874 2 456666675 5677899999999996666665
No 200
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=84.82 E-value=2.5 Score=41.12 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=68.1
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceE-Eeecccc-------hhhHHHHHHHHh
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI-CGLSRCN-------ERDIKTAWEAVK 170 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i-~~~~r~~-------~~dI~~a~eal~ 170 (620)
.-.+.++.+.++|++ ||+.+......+...++++.+..+..+. ...+-. ..++... .+.++.+++...
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~ 86 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFSGKLS---VHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRAA 86 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCCSCEE---EECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhCCCeE---EecCccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345667777888999 9995321101111256666665421110 000000 0111111 123455666666
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHH
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 240 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~ 240 (620)
..|.+.|.+.................+...+.+.++.++|++.|+. +.+-+.. ..+++.+.++++.+
T Consensus 87 ~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~--~~~~~~~~~l~~~v 153 (254)
T 3ayv_A 87 ELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVR-LLLENSH--EPHPEALRPVLEAH 153 (254)
T ss_dssp HTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCE-EEEECSS--CSSGGGTHHHHHHH
T ss_pred HhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCE-EEEcCCC--CCCHHHHHHHHHhc
Confidence 6799988775432211000000112355667777888889999974 5553322 23667777777665
No 201
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=84.74 E-value=9.1 Score=38.88 Aligned_cols=139 Identities=18% Similarity=0.207 Sum_probs=82.3
Q ss_pred HHHHHHHhHcCCCEEEEec---------CCC----ChhHHHHHHHHHHHhcccccccCCccceEEeecc--c--chhh-H
Q 007056 101 LDIARQLAKLGVDIIEAGF---------PAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--C--NERD-I 162 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGf---------P~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~--~~~d-I 162 (620)
-.-|+.++++|||.|=+|. |.. -.+....++.+++-.... +.++.+.- . +.++ +
T Consensus 44 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 44 YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHA--------LVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTS--------EEEEECCTTSSTTCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCC--------eEEEECCCCcccCCHHHHH
Confidence 3458888999999998874 221 223356677777653221 22232222 1 2222 3
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE----EcCCC---------CCCCC
Q 007056 163 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRSD 229 (620)
Q Consensus 163 ~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~----f~~ed---------~~r~d 229 (620)
+.+.+.++++|+..|++-... ...+.|+.+.+.|+. |. +.|.+ .+|++
T Consensus 116 ~na~rl~~eaGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPqsv~~~ggf~v~grt~ 176 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE------------------RVAEQIACLTAAGIP-VMAHIGFTPQSVNTLGGFRVQGRGD 176 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG------------------GGHHHHHHHHHHTCC-EEEEEECCC--------------CH
T ss_pred HHHHHHHHHhCCeEEEECCcH------------------HHHHHHHHHHHCCCC-EEeeecCCcceecccCCeEEEeCcH
Confidence 446677778999999987651 234556666777875 43 22221 12343
Q ss_pred -HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCC
Q 007056 230 -RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 274 (620)
Q Consensus 230 -~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~ 274 (620)
.+.+++-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 214 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM-----VPA---ELATQITGKLT 214 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 36677778888999999999853 354 34556666664
No 202
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=84.63 E-value=3 Score=42.36 Aligned_cols=126 Identities=15% Similarity=0.068 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 007056 126 DFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 204 (620)
Q Consensus 126 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 204 (620)
+++.++++++. + .|.+.--+.. ..+++..|++.+...|.+.+++.--.+.. .+.. +.++.
T Consensus 118 n~~ll~~~a~~-~---------kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~----~~~~---~~~dl-- 178 (280)
T 2qkf_A 118 QTDLVVAMAKT-G---------NVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF----GYDN---LVVDM-- 178 (280)
T ss_dssp BHHHHHHHHHT-C---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTC---EECCT--
T ss_pred CHHHHHHHHcC-C---------CcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc---cccCH--
Confidence 34566766542 1 1455444443 77899999999888898878777544321 1110 00000
Q ss_pred HHHHHHHHc--CCCEEEEcCCCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCCccccCHHHH
Q 007056 205 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 262 (620)
Q Consensus 205 ~~v~~a~~~--G~~~V~f~~ed~----------~r~d~e~l~~~~~~~~~aGa~~I~----------L~DTvG~~~P~~v 262 (620)
.++...|+. |+. |.|++--+ +.-.++++..++.++..+||+-+. ++|-.=.+.|+++
T Consensus 179 ~~i~~lk~~~~~~p-V~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l 257 (280)
T 2qkf_A 179 LGFGVMKQTCGNLP-VIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLL 257 (280)
T ss_dssp THHHHHHHHTTTCC-EEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------CCHH
T ss_pred HHHHHHHHhCCCCC-EEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCCHHHH
Confidence 123345554 675 88854211 134567889999999999996332 4588888999999
Q ss_pred HHHHHHHHH
Q 007056 263 GKLIADIKA 271 (620)
Q Consensus 263 ~~li~~l~~ 271 (620)
.++++.+++
T Consensus 258 ~~lv~~i~~ 266 (280)
T 2qkf_A 258 EDFLIRIKA 266 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999885
No 203
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=84.56 E-value=6.9 Score=41.10 Aligned_cols=129 Identities=11% Similarity=0.052 Sum_probs=80.2
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-EEEEcCCCC-----CCCC
Q 007056 168 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSD 229 (620)
Q Consensus 168 al~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~-~-~V~f~~ed~-----~r~d 229 (620)
..+.+|.+.|.|-.+. |+. ++...++-+.++-.+.+.+.++.+|+. |. . .|.+++.+. ...+
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 3456899999986543 221 122234556666666666777766653 31 1 255687421 2345
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCc--c-ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-Cc
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTV--G-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-AR 305 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTv--G-~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~ 305 (620)
.+...++++.+.++|++.|.+.... | -..|. ++++.+++.++ ++|..=.- . -..++..++++| |+
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~----iPvi~~Gg--i--~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQ----GVLIYAGR--Y--NAEKAEQAINDGLAD 317 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCC----SEEEEESS--C--CHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCC----CcEEEeCC--C--CHHHHHHHHHCCCcc
Confidence 6788899999999999999886531 1 11233 56778888874 34432221 2 257788889998 88
Q ss_pred EE
Q 007056 306 QV 307 (620)
Q Consensus 306 ~V 307 (620)
.|
T Consensus 318 ~V 319 (365)
T 2gou_A 318 MI 319 (365)
T ss_dssp EE
T ss_pred ee
Confidence 77
No 204
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=84.50 E-value=4.4 Score=39.73 Aligned_cols=162 Identities=15% Similarity=0.175 Sum_probs=89.2
Q ss_pred HHHHHHHhHcCCCEEEE----e-c-CCCChhHHHHHHHHHHHh-cccccccCCccceEEeecccch-hhHHHHHHHHhcC
Q 007056 101 LDIARQLAKLGVDIIEA----G-F-PAASKEDFEAVRTIAKEV-GNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYA 172 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEv----G-f-P~~s~~d~e~v~~i~~~~-~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~a 172 (620)
-+-++.|.++|.|++-+ | | |.-+- -.+.++.|.+.. .+. +.-+-+--.++ +-++.+.+ +
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~-G~~~v~~ir~~~~~~~--------~~dvhLmv~~p~~~i~~~~~----a 86 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITF-GHPVVESLRKQLGQDP--------FFDMHMMVSKPEQWVKPMAV----A 86 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCB-CHHHHHHHHHHHCSSS--------CEEEEEECSCGGGGHHHHHH----H
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCccccc-CHHHHHHHHHhhCCCC--------cEEEEEEeCCHHHHHHHHHH----c
Confidence 34456677889986665 3 4 43221 125677776642 221 11111111222 23444444 4
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee-
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI- 250 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L- 250 (620)
|++.|++-.-.. +.+.+.++.+|++|++. |..+| .++.+.+.+++. .+|.|.+
T Consensus 87 Gad~itvH~Ea~----------------~~~~~~i~~i~~~G~k~gval~p----~t~~e~l~~~l~-----~~D~Vl~m 141 (228)
T 3ovp_A 87 GANQYTFHLEAT----------------ENPGALIKDIRENGMKVGLAIKP----GTSVEYLAPWAN-----QIDMALVM 141 (228)
T ss_dssp TCSEEEEEGGGC----------------SCHHHHHHHHHHTTCEEEEEECT----TSCGGGTGGGGG-----GCSEEEEE
T ss_pred CCCEEEEccCCc----------------hhHHHHHHHHHHcCCCEEEEEcC----CCCHHHHHHHhc-----cCCeEEEe
Confidence 899888743222 12346778888999752 34455 244454444432 2565543
Q ss_pred ---cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 251 ---PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 251 ---~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
|-.-|...-.+.-+.|+.+++..++ .+|.+ |.|.-..|.-.++++||+.+
T Consensus 142 sv~pGf~Gq~f~~~~l~ki~~lr~~~~~---~~I~V----dGGI~~~t~~~~~~aGAd~~ 194 (228)
T 3ovp_A 142 TVEPGFGGQKFMEDMMPKVHWLRTQFPS---LDIEV----DGGVGPDTVHKCAEAGANMI 194 (228)
T ss_dssp SSCTTTCSCCCCGGGHHHHHHHHHHCTT---CEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCC---CCEEE----eCCcCHHHHHHHHHcCCCEE
Confidence 3333332223344558888887653 44554 56777789999999999986
No 205
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=84.47 E-value=8.8 Score=39.95 Aligned_cols=133 Identities=12% Similarity=0.026 Sum_probs=83.1
Q ss_pred HHhcCCCCEEEEEecCC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---EEEEcCCCC--CCCCHH
Q 007056 168 AVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDRK 231 (620)
Q Consensus 168 al~~ag~~~v~i~~~~S--------d~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~---~V~f~~ed~--~r~d~e 231 (620)
..+.+|.+.|.+-.+.- +. ++...+|-+.++-.+.+.+.++.+|+. |-+ .|.+++.+. ...+.+
T Consensus 160 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~ 239 (349)
T 3hgj_A 160 RALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLE 239 (349)
T ss_dssp HHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHH
T ss_pred HHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHH
Confidence 34568999988876641 21 222345667787778888888888775 322 256677542 235677
Q ss_pred HHHHHHHHHHHcCCcEEeecC--Cccc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-C
Q 007056 232 FLYEILGEVIKVGATTLNIPD--TVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 304 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~D--TvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 304 (620)
...++++.+.++|++.|.+.. +... ..|....++++.+++.++ ++|..=.-- .-..++..+++.| |
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG----LRTGAVGLI---TTPEQAETLLQAGSA 312 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC----CEEEECSSC---CCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC----ceEEEECCC---CCHHHHHHHHHCCCc
Confidence 888999999999999998875 1111 012223456777777652 455432210 1256677888888 7
Q ss_pred cEE
Q 007056 305 RQV 307 (620)
Q Consensus 305 ~~V 307 (620)
+.|
T Consensus 313 D~V 315 (349)
T 3hgj_A 313 DLV 315 (349)
T ss_dssp SEE
T ss_pred eEE
Confidence 766
No 206
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=84.43 E-value=2.6 Score=44.53 Aligned_cols=175 Identities=13% Similarity=0.139 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-----hhHHHHHHHHHHHhcccccccCCccceEEe-----------
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG----------- 153 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----------- 153 (620)
.++.+++++.+. ++|++.||+. +|... +.+.+.++++.+..+-.+ ..++.
T Consensus 32 ~~~~~e~l~~aa---~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~f~~p~~~~g 101 (393)
T 1xim_A 32 ALDPVEAVHKLA---EIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIV-------PMVTTNLFTHPVFKDG 101 (393)
T ss_dssp CCCHHHHHHHHH---HHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTC
T ss_pred CCCHHHHHHHHH---HhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEE-------EEEecCCcCCcccccC
Confidence 357777766665 4599999998 67543 345566666665433221 11221
Q ss_pred -ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHc--CCCEEE
Q 007056 154 -LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSL--GCDDVE 219 (620)
Q Consensus 154 -~~r~~~-------~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~a~~~--G~~~V~ 219 (620)
++...+ +.++++++.....|.+.|.+....... ..-...+ .+...+.+.++++++++. |+. +.
T Consensus 102 ~l~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~-l~ 178 (393)
T 1xim_A 102 GFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGA--EYDSAKDVSAALDRYREALNLLAQYSEDRGYGLR-FA 178 (393)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCC--cCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcE-EE
Confidence 111111 234455555556688888765431000 0001122 345666777788888888 653 44
Q ss_pred EcCCCC------CCCCHHHHHHHHHHHHHcCCcE-Ee-ecCCccccCHH-HHHHHHHHHHHhCCCCCceeEEEecCCCc
Q 007056 220 FSPEDA------GRSDRKFLYEILGEVIKVGATT-LN-IPDTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDL 289 (620)
Q Consensus 220 f~~ed~------~r~d~e~l~~~~~~~~~aGa~~-I~-L~DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~ 289 (620)
+-+... .-.+.+.+.++++ +.+... +. ..||.=...+. .+.+.++.+... + -...+|+++..
T Consensus 179 lE~~~~~~~~~~~~~t~~~~~~ll~---~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~-~----~i~~vHl~D~~ 249 (393)
T 1xim_A 179 IEPKPNEPRGDILLPTAGHAIAFVQ---ELERPELFGINPETGHEQMSNLNFTQGIAQALWH-K----KLFHIDLNGQH 249 (393)
T ss_dssp EECCSSSSSSEESSCSHHHHHHHHT---TSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHH-T----CBCCCEECBCC
T ss_pred EecCCCCCCCCCcCCCHHHHHHHHH---HhCCccceEEEEccCCccccCCCHHHHHHHhhhc-C----CEEEEEeCCCC
Confidence 422211 2245566666654 345433 43 34664332221 234445544411 1 23477888763
No 207
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=84.16 E-value=39 Score=34.36 Aligned_cols=197 Identities=9% Similarity=0.046 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHHH-HHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFE-AVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~e-~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+. .++...+... +.+|.|++.+-.+.++ |+.+-
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 103 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-------KNRLLLAGSGCESTQATVEMTV 103 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888889999999999998866 3 4555666654 4444444322 3457888877654444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
....+|++.+-+..|-.- +-+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.+++ +.
T Consensus 104 -~A~~~Gadavlv~~P~y~-----~~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 169 (307)
T 3s5o_A 104 -SMAQVGADAAMVVTPCYY-----RGRMSSAALIHHYTKVAD---LSPIPVVLYSVPANTGLDLPVDAVVTLS----QH- 169 (307)
T ss_dssp -HHHHTTCSEEEEECCCTT-----GGGCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHH----TS-
T ss_pred -HHHHcCCCEEEEcCCCcC-----CCCCCHHHHHHHHHHHHh---hcCCCEEEEeCCcccCCCCCHHHHHHHh----cC-
Confidence 335679999877666421 112466776666555433 3355545665432 3356677766654 33
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++... ++ +..+ +-++++ ..+.++..|++. .+.| .+|..-+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~~~---~~--~f~v-~~G~d~------~~l~~l~~G~~G---~is~----~an~~P~ 228 (307)
T 3s5o_A 170 PNIVGMXDSGGD--VTRIGLIVHKTR---KQ--DFQV-LAGSAG------FLMASYALGAVG---GVCA----LANVLGA 228 (307)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHTT---TS--SCEE-EESSGG------GHHHHHHHTCCE---EECG----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHhcc---CC--CeEE-EeCcHH------HHHHHHHcCCCE---EEec----hhhhhHH
Confidence 579999999884 345555544321 11 2233 344543 256678889854 3444 5677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 229 ~~~~l~~a 236 (307)
T 3s5o_A 229 QVCQLERL 236 (307)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 208
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=84.11 E-value=12 Score=37.83 Aligned_cols=156 Identities=12% Similarity=0.161 Sum_probs=86.8
Q ss_pred HHHHHHHHhHcCCCEEEE----ecCCCChhHHHHHHHHHHHhcccccccCCccceEEe-ecccchhhHHHHHHHHhcCCC
Q 007056 100 KLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 100 Kl~Ia~~L~~~Gvd~IEv----GfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~ag~ 174 (620)
-.++++...+.|.+.|-+ +|..-+. +.++.+++.+. .|.++- |.+ .+..|..+. .+|+
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~---~~L~~ir~~v~---------lPVl~Kdfi~-d~~qi~ea~----~~GA 143 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAP---EFLTAARQACS---------LPALRKDFLF-DPYQVYEAR----SWGA 143 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCH---HHHHHHHHTSS---------SCEEEESCCC-STHHHHHHH----HTTC
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCH---HHHHHHHHhcC---------CCEEECCccC-CHHHHHHHH----HcCC
Confidence 367899999999999988 3443344 44555554321 133321 221 222454443 4699
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecC--
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD-- 252 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~D-- 252 (620)
+.|.+-.+.- +. +.+.+.+++++++|++ +-+.. ++.+.+ +.+.++|++.|.+--
T Consensus 144 D~VlLi~a~L----------~~----~~l~~l~~~a~~lGl~-~lvev-----h~~eEl----~~A~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 144 DCILIIMASV----------DD----DLAKELEDTAFALGMD-ALIEV-----HDEAEM----ERALKLSSRLLGVNNRN 199 (272)
T ss_dssp SEEEEETTTS----------CH----HHHHHHHHHHHHTTCE-EEEEE-----CSHHHH----HHHTTSCCSEEEEECBC
T ss_pred CEEEEccccc----------CH----HHHHHHHHHHHHcCCe-EEEEe-----CCHHHH----HHHHhcCCCEEEECCCC
Confidence 9998765431 21 3567888999999985 43333 344433 455678999876652
Q ss_pred --CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHHHhcCcEE
Q 007056 253 --TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQV 307 (620)
Q Consensus 253 --TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~V 307 (620)
|.+. .+..+.+++ +.+|. ++++-.= .|. ...+...+.++||+.|
T Consensus 200 l~t~~~-dl~~~~~L~----~~ip~--~~~vIae----sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 200 LRSFEV-NLAVSERLA----KMAPS--DRLLVGE----SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp TTTCCB-CTHHHHHHH----HHSCT--TSEEEEE----SSCCSHHHHHHHHTTTCCEE
T ss_pred CccCCC-ChHHHHHHH----HhCCC--CCcEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 2221 233444444 34543 2222211 222 2456667778888776
No 209
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.06 E-value=12 Score=37.76 Aligned_cols=99 Identities=12% Similarity=0.052 Sum_probs=64.0
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCH-------HHH----HHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEcCCCCCC
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSG-------IHM----EHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAGR 227 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd-------~h~----~~~l~~t~ee~l~~~~~~v~~a~~~G--~~~V~f~~ed~~r 227 (620)
.....++++..+|++.|++=+|-|| ++. --+.|.+.+..++ .++..|+.+ .. +.+- +.
T Consensus 33 ~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~----~v~~ir~~~~~~P-ivlm----~Y 103 (267)
T 3vnd_A 33 LSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFD----IITKVRAQHPDMP-IGLL----LY 103 (267)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH----HHHHHHHHCTTCC-EEEE----EC
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH----HHHHHHhcCCCCC-EEEE----ec
Confidence 3344456677789999999888777 221 1135677665554 455555542 33 3221 12
Q ss_pred CCHHH---HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHh
Q 007056 228 SDRKF---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 228 ~d~e~---l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
.++-| +.++++.+.++|++.+.++| +.|++..+++..++++
T Consensus 104 ~npv~~~g~e~f~~~~~~aGvdgvii~D----lp~ee~~~~~~~~~~~ 147 (267)
T 3vnd_A 104 ANLVFANGIDEFYTKAQAAGVDSVLIAD----VPVEESAPFSKAAKAH 147 (267)
T ss_dssp HHHHHHHCHHHHHHHHHHHTCCEEEETT----SCGGGCHHHHHHHHHT
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEeCC----CCHhhHHHHHHHHHHc
Confidence 33322 25678888999999999998 6678888888888875
No 210
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=84.06 E-value=42 Score=34.61 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCCCC---------CCCCHHHHHHHHHHHHHcCCcEEeec-CCccc-c-CHHHHHH
Q 007056 197 QQVVEIARSMVKFARSLGCDDVEFSPEDA---------GRSDRKFLYEILGEVIKVGATTLNIP-DTVGI-T-MPTEFGK 264 (620)
Q Consensus 197 ee~l~~~~~~v~~a~~~G~~~V~f~~ed~---------~r~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~-~-~P~~v~~ 264 (620)
+...+.+.+++++|++.|+. +.+-+.+. .-.+++.+.++++. .+...+.++ ||.=. . .-....+
T Consensus 194 ~~~~~~l~~l~~~A~~~Gv~-l~lE~~~~~~~~~g~~~~~~t~~~~~~l~~~---v~~~~vgl~~D~~h~~~~~g~d~~~ 269 (367)
T 1tz9_A 194 ENLRYFLERVIPVCEEENIK-MGIHPDDPPWEIFGLPRITKNLADLKRILSL---VDSPANGITFCTGSLGADPTNDLPT 269 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTCE-EEECCCSSSSCBTTBCCCTTSHHHHHHHHHH---TCSTTEECCEETTHHHHSTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCE-EEEEECCCcccccCCCcccCCHHHHHHHHHh---cCCCCEEEEEecCchhhhcCCCHHH
Confidence 44556677788889999984 77744321 12356666666654 344333333 66333 1 1123344
Q ss_pred HHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 265 LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 265 li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.++.+...+ ..+|.+|.... .+-...+..-.+ +.|..+..+++..|+..++
T Consensus 270 ~i~~~~~rI-------~~vHlkD~~~~----------~~~~~~~~~~~~---G~G~id~~~il~~L~~~gy 320 (367)
T 1tz9_A 270 MIREIGHRI-------NFVHFRNVKYL----------GEHRFEETAHPS---VAGSLDMAELMQALVDVGY 320 (367)
T ss_dssp HHHHHGGGC-------CCEEECCEEEC----------SSSEEEECCSSG---GGSSSCHHHHHHHHHHHTC
T ss_pred HHHHHhhhE-------EEEEEecCCCC----------CCCccccccCCC---CCCCcCHHHHHHHHHHcCC
Confidence 555554443 47888886421 011112221121 3589999999999997653
No 211
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=84.02 E-value=3.8 Score=41.89 Aligned_cols=103 Identities=14% Similarity=0.098 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 300 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 300 (620)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+. +++|-+|+ +|+.--++.-+..|-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~-rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGT-KVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTS-SCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC-CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999994 58999999999998876541 25666665 789999999999999
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
++||+.+=..---+- + .+-++++..++.
T Consensus 101 ~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 128 (301)
T 3m5v_A 101 EHGADGILSVAPYYN-K---PTQQGLYEHYKA 128 (301)
T ss_dssp HTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 999999866543332 2 244566655543
No 212
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=83.93 E-value=9.3 Score=39.30 Aligned_cols=188 Identities=16% Similarity=0.089 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh-hHHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 171 (620)
..+.+.-..+++.-.+++-+.|=-.+|.... ...+.+..+....... . .-+|...=+-.+ ..+.+..++++
T Consensus 24 v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~---~-~~VPValHLDHg~~~e~~~~ai~~--- 96 (307)
T 3n9r_A 24 FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCER---Y-PHIPVALHLDHGTTFESCEKAVKA--- 96 (307)
T ss_dssp CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHH---S-TTSCEEEEEEEECSHHHHHHHHHH---
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHh---c-CCCcEEEECCCCCCHHHHHHHHHh---
Confidence 4678899999999999999976444443211 0113333332211000 0 013444333333 34566666665
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCC--------CCCCCHHHHHHHH
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--------AGRSDRKFLYEIL 237 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed--------~~r~d~e~l~~~~ 237 (620)
|...|.+=.| ..+.||+++..++.+++|+..|+. |+- +-|| ...|+|+.+.+++
T Consensus 97 -GFtSVMiDgS----------~~p~eeNi~~Tk~vv~~ah~~gvs-VEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv 164 (307)
T 3n9r_A 97 -GFTSVMIDAS----------HHAFEENLELTSKVVKMAHNAGVS-VEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFV 164 (307)
T ss_dssp -TCSEEEECCT----------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCC----------CCSCCHHHHHHHH
T ss_pred -CCCcEEEECC----------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcccccccccCCCHHHHHHHH
Confidence 8888754232 247799999999999999999974 542 2222 3468999888877
Q ss_pred HHHHHcCCcEEeec--CCcccc----CHHHHHHHHHHHHHhCCCCCceeEEEecCC-------------------CcchH
Q 007056 238 GEVIKVGATTLNIP--DTVGIT----MPTEFGKLIADIKANTPGIENVVISTHCQN-------------------DLGLS 292 (620)
Q Consensus 238 ~~~~~aGa~~I~L~--DTvG~~----~P~~v~~li~~l~~~~~~~~~v~i~~H~HN-------------------D~GlA 292 (620)
++ .|+|.+-++ -.=|.- .|.==.++++.+++ ++ ++||-+|+=. ..|..
T Consensus 165 ~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~-~~---~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p 237 (307)
T 3n9r_A 165 KE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR-LT---NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVP 237 (307)
T ss_dssp HH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHH-HH---CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCC
T ss_pred HH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHh-cC---CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCC
Confidence 64 688866554 222322 12212234444443 33 3679999732 34555
Q ss_pred HHHHHHHHHhcCcEE
Q 007056 293 TANTIAGACAGARQV 307 (620)
Q Consensus 293 vANslaAv~aGA~~V 307 (620)
...-..|+..|+.-|
T Consensus 238 ~e~i~~ai~~GV~Ki 252 (307)
T 3n9r_A 238 FEFLQESVKGGINKV 252 (307)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHcCceEE
Confidence 666666666665555
No 213
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.89 E-value=3.8 Score=40.35 Aligned_cols=67 Identities=19% Similarity=0.385 Sum_probs=51.0
Q ss_pred HHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc
Q 007056 237 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 314 (620)
Q Consensus 237 ~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl 314 (620)
++.+.++|||.|.| |+.-...|..+.++++.+++. ++.+..=+|+ ...+..|.++||+.|=+++.|+
T Consensus 94 i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~-----g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH-----HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT-----TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC-----CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 45677899998854 777777898899999999874 2456666675 5667889999999996556554
No 214
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.82 E-value=4 Score=40.19 Aligned_cols=159 Identities=19% Similarity=0.180 Sum_probs=89.3
Q ss_pred HHHHhHcCCCEEEEe-----c-CCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchh-hHHHHHHHHhcCCCCE
Q 007056 104 ARQLAKLGVDIIEAG-----F-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER-DIKTAWEAVKYAKRPR 176 (620)
Q Consensus 104 a~~L~~~Gvd~IEvG-----f-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~-dI~~a~eal~~ag~~~ 176 (620)
++.+ +.|+|++++. | |.-+- -...++.|++.. +. +..+-|--.+++ -++.+.++ |++.
T Consensus 19 i~~~-~~gad~lHvDvmDG~fvpn~t~-G~~~v~~lr~~~-~~--------~~dvhLmv~dp~~~i~~~~~a----GAd~ 83 (231)
T 3ctl_A 19 IEFI-DSHADYFHIDIMDGHFVPNLTL-SPFFVSQVKKLA-TK--------PLDCHLMVTRPQDYIAQLARA----GADF 83 (231)
T ss_dssp HHHH-HTTCSCEEEEEECSSSSSCCCB-CHHHHHHHHTTC-CS--------CEEEEEESSCGGGTHHHHHHH----TCSE
T ss_pred HHHH-HcCCCEEEEEEEeCccCccchh-cHHHHHHHHhcc-CC--------cEEEEEEecCHHHHHHHHHHc----CCCE
Confidence 4555 8898876664 3 43221 235677766531 11 112222222333 35555554 8898
Q ss_pred EEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee----
Q 007056 177 IHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---- 250 (620)
Q Consensus 177 v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L---- 250 (620)
|.+-.-+ ++ | +.++++.+|++|++. |.++|. ++.+.+.++++ ++|.|.+
T Consensus 84 itvh~Ea~~~-~---------------~~~~i~~i~~~G~k~gv~lnp~----tp~~~~~~~l~-----~~D~VlvmsV~ 138 (231)
T 3ctl_A 84 ITLHPETING-Q---------------AFRLIDEIRRHDMKVGLILNPE----TPVEAMKYYIH-----KADKITVMTVD 138 (231)
T ss_dssp EEECGGGCTT-T---------------HHHHHHHHHHTTCEEEEEECTT----CCGGGGTTTGG-----GCSEEEEESSC
T ss_pred EEECcccCCc-c---------------HHHHHHHHHHcCCeEEEEEECC----CcHHHHHHHHh-----cCCEEEEeeec
Confidence 8764322 21 2 346788899999852 344552 44455544433 6787753
Q ss_pred cCCccccCHHHHHHHHHHHHHhCC--CCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 251 PDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 251 ~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
|-+-|-......-+.|+.+++..+ +. +++|++ |.|.-..|.-.++++||+.+
T Consensus 139 pGfggQ~f~~~~l~kI~~lr~~~~~~~~-~~~I~V----dGGI~~~~~~~~~~aGAd~~ 192 (231)
T 3ctl_A 139 PGFAGQPFIPEMLDKLAELKAWREREGL-EYEIEV----DGSCNQATYEKLMAAGADVF 192 (231)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTC-CCEEEE----ESCCSTTTHHHHHHHTCCEE
T ss_pred cCcCCccccHHHHHHHHHHHHHHhccCC-CceEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 223343334355556666665442 11 255665 78888889999999999986
No 215
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=83.78 E-value=36 Score=33.70 Aligned_cols=96 Identities=17% Similarity=0.080 Sum_probs=61.8
Q ss_pred HHHHHHhcCCCCEEEEEecCCHH-----HHH------HHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEcCCCCCCCCH
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGI-----HME------HKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDR 230 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~-----h~~------~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~~ed~~r~d~ 230 (620)
..++.+..+|++.|.+=+|.||- .++ .+-|.+.+..++ .++..|+. ... +.+- +.+++
T Consensus 35 ~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~----~v~~ir~~~~~~P-i~~m----~y~n~ 105 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLE----LSETLRKEFPDIP-FLLM----TYYNP 105 (262)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHH----HHHHHHHHCTTSC-EEEE----CCHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHH----HHHHHHhhcCCCC-EEEE----ecCcH
Confidence 33556777899999998888751 111 234566555444 45555554 444 3331 23333
Q ss_pred HHH---HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHh
Q 007056 231 KFL---YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 231 e~l---~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
-+- .+.++.+.++|++.+.++| +.+++..++++.++++
T Consensus 106 v~~~g~~~f~~~~~~aG~dgvii~d----l~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 106 IFRIGLEKFCRLSREKGIDGFIVPD----LPPEEAEELKAVMKKY 146 (262)
T ss_dssp HHHHCHHHHHHHHHHTTCCEEECTT----CCHHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHHHHc
Confidence 333 4678888999999999998 4578888899888875
No 216
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=83.58 E-value=20 Score=36.27 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=79.9
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEeecc--c--chh-hHH
Q 007056 102 DIARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--C--NER-DIK 163 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~--~~~-dI~ 163 (620)
.-|+.++++|||.|=+|. |...+ +....++.+++..... +.++.+.- . +.+ -++
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNA--------MIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSS--------EEEEECCTTSSSSCHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCC--------eEEEECCCCCccCCHHHHHH
Confidence 347888999999998874 32222 2234566666643221 23333222 1 222 234
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE----EcCCC---------CCCC-C
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRS-D 229 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~----f~~ed---------~~r~-d 229 (620)
.+.+.++ +|+..|++-... .+.+.|+.+.+.|+. |. +.|.+ .+|+ .
T Consensus 100 na~rl~k-aGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPQs~~~~ggf~v~grt~~ 159 (275)
T 1o66_A 100 AAAELMA-AGAHMVKLEGGV------------------WMAETTEFLQMRGIP-VCAHIGLTPQSVFAFGGYKVQGRGGK 159 (275)
T ss_dssp HHHHHHH-TTCSEEEEECSG------------------GGHHHHHHHHHTTCC-EEEEEESCGGGTTC-----------C
T ss_pred HHHHHHH-cCCcEEEECCcH------------------HHHHHHHHHHHcCCC-eEeeeccCceeecccCCeEEEeChHH
Confidence 3445555 899999987651 234556677778875 43 22221 1232 3
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCC
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 274 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~ 274 (620)
.+.+++-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (275)
T 1o66_A 160 AQALLNDAKAHDDAGAAVVLMEC-----VLA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 47888888899999999999853 354 34556666664
No 217
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=83.51 E-value=5.1 Score=42.34 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=79.4
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-EEEEcCCCC-----CCCCH
Q 007056 169 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSDR 230 (620)
Q Consensus 169 l~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~-~-~V~f~~ed~-----~r~d~ 230 (620)
.+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.|+.+|+. |. . .|.+++.+. ...+.
T Consensus 175 a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 175 AKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCH
Confidence 356799999886653 221 222345667777777777777777764 32 1 356677431 23456
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCc-cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcEE
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTV-GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 307 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTv-G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 307 (620)
+...++++.+.++|++.|.+..-. ....|..-.++++.+++.++ ++|..=. +. -...+..+++.| |+.|
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~----iPvi~~G--gi--~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK----GGLIYCG--NY--DAGRAQARLDDNTADAV 325 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC----CCEEEEC--CC--CHHHHHHHHHCCCceEE
Confidence 788899999999999999885411 00001001246677888774 4444322 22 267778888887 7766
No 218
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=83.33 E-value=11 Score=39.48 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=63.0
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee--cCCccccCHHHHHH--HHHHHHHhCCCCCceeE
Q 007056 206 MVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFGK--LIADIKANTPGIENVVI 281 (620)
Q Consensus 206 ~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L--~DTvG~~~P~~v~~--li~~l~~~~~~~~~v~i 281 (620)
+++++.+.|.. |..+- +.++.+.+...++.+.+.|.+ |.| | |.++-+|.+-.+ .|..+++.+|+ ++|
T Consensus 127 LL~~va~~gKP-viLst---Gmstl~Ei~~Ave~i~~~g~~-viLlhC-~s~YPt~~~~~nL~aI~~Lk~~fp~---lpV 197 (350)
T 3g8r_A 127 LLERIARSDKP-VVAST---AGARREDIDKVVSFMLHRGKD-LTIMHC-VAEYPTPDDHLHLARIKTLRQQYAG---VRI 197 (350)
T ss_dssp HHHHHHTSCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCC-EEEEEC-CCCSSCCGGGCCTTHHHHHHHHCTT---SEE
T ss_pred HHHHHHhhCCc-EEEEC---CCCCHHHHHHHHHHHHHcCCC-EEEEec-CCCCCCCcccCCHHHHHHHHHHCCC---CCE
Confidence 45555567765 66653 235777777777777777765 555 5 446666654332 57788998974 678
Q ss_pred EEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 282 STHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 282 ~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
++=-|-.-+ ..+-+++|+.+||+.|+.=+
T Consensus 198 G~SdHt~g~-~~~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 198 GYSTHEDPD-LMEPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp EEEECCCSS-CCHHHHHHHHTTCCEEEEEB
T ss_pred EcCCCCCCC-ccHHHHHHHHcCCCEEEEec
Confidence 876676422 13456899999999986533
No 219
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=83.11 E-value=42 Score=34.56 Aligned_cols=195 Identities=10% Similarity=0.080 Sum_probs=116.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 123 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-------GRRTLMAGIGALRTDEAVALAK 123 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888889999999999999877 4 455566665 44455555432 3357888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+.+.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ .
T Consensus 124 ~-A~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~---a~~lPiilYn~P~~tg~~l~~e~~~~La~----~- 187 (332)
T 2r8w_A 124 D-AEAAGADALLLAPVSY-------TPLTQEEAYHHFAAVAG---ATALPLAIYNNPTTTRFTFSDELLVRLAY----I- 187 (332)
T ss_dssp H-HHHHTCSEEEECCCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEECCHHHHCCCCCHHHHHHHHT----S-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHc----C-
Confidence 3 3456999887765532 24576776665554443 3345545665432 33457777766653 2
Q ss_pred CcEEeecCCccccC--HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCccc
Q 007056 245 ATTLNIPDTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 322 (620)
Q Consensus 245 a~~I~L~DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~ 322 (620)
...+.+.|+.|-.. ..++.+++ +..++ +..+ +-+ +| ...+.++..|++.+ +.| .+|..
T Consensus 188 pnIvgiKdssgd~~~~~~~~~~l~----~~~~~--~f~v-~~G-~D-----~~~l~~l~~G~~G~---is~----~anv~ 247 (332)
T 2r8w_A 188 PNIRAIKMPLPADADYAGELARLR----PKLSD--DFAI-GYS-GD-----WGCTDATLAGGDTW---YSV----VAGLL 247 (332)
T ss_dssp TTEEEEEECCCTTCCHHHHHHHHT----TTSCT--TCEE-EEC-CH-----HHHHHHHHTTCSEE---EES----GGGTC
T ss_pred CCEEEEEeCCCCchhHHHHHHHHH----HhcCC--CEEE-EeC-ch-----HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 57899999998421 33444443 33432 2222 122 22 35677888998654 443 45776
Q ss_pred HHHHHHHHH
Q 007056 323 LEEVVMAFK 331 (620)
Q Consensus 323 lEevv~~L~ 331 (620)
.+.++...+
T Consensus 248 P~~~~~l~~ 256 (332)
T 2r8w_A 248 PVPALQLMR 256 (332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665444
No 220
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=82.97 E-value=12 Score=38.55 Aligned_cols=202 Identities=15% Similarity=0.108 Sum_probs=115.9
Q ss_pred HHHHHhHcCCCEEEEec---------CCCCh---h-HHHHHHHHHHHhcccccccCCccceEE----eecccchhhHHHH
Q 007056 103 IARQLAKLGVDIIEAGF---------PAASK---E-DFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 165 (620)
Q Consensus 103 Ia~~L~~~Gvd~IEvGf---------P~~s~---~-d~e~v~~i~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 165 (620)
-++.++++||+.|=+|. |...+ + ....++.+++.... |.++ ||+ ....+.++
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------pviaD~d~Gyg--~~~~v~~~ 109 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDL---------PVLVDIDTGFG--GVLNVART 109 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCC---------CEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCC---------CEEEECCCCCC--CHHHHHHH
Confidence 36777889999998873 43222 2 24556666664321 2222 232 34556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCCC-CCCHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAG-RSDRKFLYEILGEV 240 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~~-r~d~e~l~~~~~~~ 240 (620)
.+.+..+|+..|++-..+++- |...+-=.+.+|..++++.+++. |...+ ..+ .|+. ....+.+++-+++.
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A----~~~~~-I~ARtda~~~~g~~~ai~Ra~ay 184 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV----APSLY-IVARTDARGVEGLDEAIERANAY 184 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH----CTTSE-EEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc----CCCeE-EEEeeccccccCHHHHHHHHHHH
Confidence 777777899999998876532 21111113567777766555444 54422 222 1111 12267888888999
Q ss_pred HHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHHHhcCcEEeeccccccCCcC
Q 007056 241 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQVEVTINGIGERAG 319 (620)
Q Consensus 241 ~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~Vd~Ti~GlGERaG 319 (620)
.++|||.|.+.= .-.++++.++.+. ++ +|+-+-.-. .|. ..-+.-.--+.|+++|-..... =|+-
T Consensus 185 ~eAGAD~i~~e~---~~~~~~~~~i~~~----~~----~P~~~n~~~-~g~tp~~~~~eL~~lGv~~v~~~~~~--~raa 250 (305)
T 3ih1_A 185 VKAGADAIFPEA---LQSEEEFRLFNSK----VN----APLLANMTE-FGKTPYYSAEEFANMGFQMVIYPVTS--LRVA 250 (305)
T ss_dssp HHHTCSEEEETT---CCSHHHHHHHHHH----SC----SCBEEECCT-TSSSCCCCHHHHHHTTCSEEEECSHH--HHHH
T ss_pred HHcCCCEEEEcC---CCCHHHHHHHHHH----cC----CCEEEeecC-CCCCCCCCHHHHHHcCCCEEEEchHH--HHHH
Confidence 999999999852 3455665555554 43 223221100 111 0113445556799998544433 4788
Q ss_pred cccHHHHHHHHHhcc
Q 007056 320 NASLEEVVMAFKCRG 334 (620)
Q Consensus 320 Na~lEevv~~L~~~~ 334 (620)
+.++++++..|...|
T Consensus 251 ~~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 251 AKAYENVFTLIKETG 265 (305)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcC
Confidence 888999888888765
No 221
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=82.87 E-value=7.2 Score=38.08 Aligned_cols=199 Identities=12% Similarity=0.056 Sum_probs=106.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.|-.+-...+-+.+.+.|++.+-.-.......+.+.++.+... .+ ..|..+. .....+...++.+...+
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~v-------dgiI~~~-~~~~~~~~~~~~~~~~~ 89 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHL---KV-------DAIFITT-LDDVYIGSAIEEAKKAG 89 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHT---TC-------SEEEEEC-SCTTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc---CC-------CEEEEec-CChHHHHHHHHHHHHcC
Confidence 3555666777888889999876553322222334566665542 11 1122221 23344444555566678
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCC-----EEEE-cCCCCCCCCHHHHHHHHHHHHHc-C
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-L-GCD-----DVEF-SPEDAGRSDRKFLYEILGEVIKV-G 244 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~-~-G~~-----~V~f-~~ed~~r~d~e~l~~~~~~~~~a-G 244 (620)
++.|.+-....+.........+.. +....+++++.+ + |.. .+.| +.........+...-+.+++.+. |
T Consensus 90 iPvV~~~~~~~~~~~~~~V~~D~~---~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g 166 (293)
T 3l6u_A 90 IPVFAIDRMIRSDAVVSSITSNNQ---MIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPT 166 (293)
T ss_dssp CCEEEESSCCCCTTCSEEEEECHH---HHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTT
T ss_pred CCEEEecCCCCCCcceeEEecCHH---HHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCC
Confidence 887765332221000011223333 344555666665 3 444 5555 32222223345555566666666 6
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
...... -.+...++...+.+..+.+..|+.+ .+=|.||. +|++-..+.-++|-+ |.+|.|++
T Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~--di~vig~d 228 (293)
T 3l6u_A 167 LSIVDS--VSGNYDPVTSERVMRQVIDSGIPFD----AVYCHNDD-IAMGVLEALKKAKIS--GKIVVGID 228 (293)
T ss_dssp EEEEEE--EECTTCHHHHHHHHHHHHHTTCCCS----EEEESSHH-HHHHHHHHHHHTTCC--CCEEEEEE
T ss_pred cEEeee--ccCCCCHHHHHHHHHHHHHhCCCCC----EEEECCch-HHHHHHHHHHhCCCC--CeEEEEec
Confidence 554322 3455678888888888777666432 34466653 344444455577887 99999976
No 222
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=82.75 E-value=11 Score=36.66 Aligned_cols=194 Identities=14% Similarity=0.135 Sum_probs=100.2
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 98 KEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 98 ~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
++-+++++.|.+.|++.|.+--+... ...++.++++++... .|.+.+-.-...++++.++++ |
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------iPvi~~Ggi~~~~~~~~~~~~----G 97 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVF---------IPLTVGGGVRSLEDARKLLLS----G 97 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCC---------SCEEEESSCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCC---------CCEEEECCcCCHHHHHHHHHc----C
Confidence 45688999999999998887433221 234566777665321 244443222345677777665 8
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC--EEEEcCC----------CCCCC-CHHHHHHHHHHH
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD--DVEFSPE----------DAGRS-DRKFLYEILGEV 240 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~--~V~f~~e----------d~~r~-d~e~l~~~~~~~ 240 (620)
++.|++-.. . +. . -+.+.++.+. .|.+ .+..++- +.+.. ......+.++.+
T Consensus 98 ad~V~lg~~--~--l~-----~----p~~~~~~~~~---~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 161 (252)
T 1ka9_F 98 ADKVSVNSA--A--VR-----R----PELIRELADH---FGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKG 161 (252)
T ss_dssp CSEEEECHH--H--HH-----C----THHHHHHHHH---HCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChH--H--Hh-----C----cHHHHHHHHH---cCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHH
Confidence 888876321 1 00 0 0112233332 2211 1222220 11100 001234556677
Q ss_pred HHcCCcEEeecCC--ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEeeccccccCC
Q 007056 241 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 317 (620)
Q Consensus 241 ~~aGa~~I~L~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Ti~GlGER 317 (620)
.+.|++.|.+.++ .|...... .++++.+++.++ +|+-.- .|.. ..+.....++||+.|- .|=+=-
T Consensus 162 ~~~G~~~i~~~~~~~~g~~~g~~-~~~i~~l~~~~~----ipvia~----GGI~~~~d~~~~~~~Gadgv~---vgsal~ 229 (252)
T 1ka9_F 162 VELGAGEILLTSMDRDGTKEGYD-LRLTRMVAEAVG----VPVIAS----GGAGRMEHFLEAFQAGAEAAL---AASVFH 229 (252)
T ss_dssp HHHTCCEEEEEETTTTTTCSCCC-HHHHHHHHHHCS----SCEEEE----SCCCSHHHHHHHHHTTCSEEE---ESHHHH
T ss_pred HHcCCCEEEEecccCCCCcCCCC-HHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHCCCHHHH---HHHHHH
Confidence 7789998887643 34332211 456677777652 333321 3444 3677777788988762 221111
Q ss_pred cCcccHHHHHHHHHh
Q 007056 318 AGNASLEEVVMAFKC 332 (620)
Q Consensus 318 aGNa~lEevv~~L~~ 332 (620)
.+.-+++++...|..
T Consensus 230 ~~~~~~~~~~~~l~~ 244 (252)
T 1ka9_F 230 FGEIPIPKLKRYLAE 244 (252)
T ss_dssp TTSSCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 233477777777765
No 223
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=82.73 E-value=16 Score=37.00 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=66.8
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCCccccC---HH---HHHHHHHHHHHhCCCCC-ceeEEEecCCCcchHHHHHHHH
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNIPDTVGITM---PT---EFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAG 299 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~---P~---~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaA 299 (620)
..+.+--..-++.+++.||+.|-+.=-.|.+. -. .+.+-|..+++..++.. +++|+.-.=+|.-.=..-+..|
T Consensus 102 ~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia 181 (281)
T 2a4a_A 102 TDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAV 181 (281)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHH
Confidence 45555555556777788999988777777543 33 56677777777654321 2345544445554333567889
Q ss_pred HHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 300 ACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 300 v~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+++||+.|-++- |. ..|++.+|++..+.+
T Consensus 182 ~eaGADfVKTST-Gf--~~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 182 LNGNADFIKTST-GK--VQINATPSSVEYIIK 210 (281)
T ss_dssp HTTTCSEEECCC-SC--SSCCCCHHHHHHHHH
T ss_pred HHhCCCEEEeCC-CC--CCCCCCHHHHHHHHH
Confidence 999999999885 22 248899998766554
No 224
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.67 E-value=13 Score=38.20 Aligned_cols=96 Identities=7% Similarity=0.018 Sum_probs=41.9
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCc
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~ 246 (620)
+.+...|++.|-+..++.+.. -.|.+|-.+.+..+++.+ |...|..+. +..+.....+.++.+.++|||
T Consensus 36 ~~li~~Gv~Gl~v~GtTGE~~-----~Lt~~Er~~v~~~~v~~~---grvpViaGv---g~~~t~~ai~la~~A~~~Gad 104 (313)
T 3dz1_A 36 DFYAEVGCEGVTVLGILGEAP-----KLDAAEAEAVATRFIKRA---KSMQVIVGV---SAPGFAAMRRLARLSMDAGAA 104 (313)
T ss_dssp HHHHHTTCSEEEESTGGGTGG-----GSCHHHHHHHHHHHHHHC---TTSEEEEEC---CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHCCCCEEEeCccCcChh-----hCCHHHHHHHHHHHHHHc---CCCcEEEec---CCCCHHHHHHHHHHHHHcCCC
Confidence 333444555555544444432 244555444444444443 111233321 223444555555555555555
Q ss_pred EEeecCCccccCHHHHHHHHHHHHHhC
Q 007056 247 TLNIPDTVGITMPTEFGKLIADIKANT 273 (620)
Q Consensus 247 ~I~L~DTvG~~~P~~v~~li~~l~~~~ 273 (620)
.+.+.=-.-..+++++.+.++.+.+..
T Consensus 105 avlv~~P~~~~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 105 GVMIAPPPSLRTDEQITTYFRQATEAI 131 (313)
T ss_dssp EEEECCCTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHhC
Confidence 443322222234445555555555444
No 225
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=82.62 E-value=8.1 Score=41.76 Aligned_cols=128 Identities=10% Similarity=0.103 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAW 166 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~ 166 (620)
++.++.++.++.+.+.|.|+|++|. |++. ++|.+.+.-+.+.+....... .. ......--.+.+-+++|+
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~-~~-~vpISIDT~~~~VaeaAL 286 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANL-IY-KPLVSIDTRKLEVMQKIL 286 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTC-SS-CCEEEEECCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc-CC-CCeEEEeCCCHHHHHHHH
Confidence 6788899999999999999999996 4322 133443322222221100000 00 011223334566677777
Q ss_pred HHHhcCCCCE-EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-------------CHHH
Q 007056 167 EAVKYAKRPR-IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS-------------DRKF 232 (620)
Q Consensus 167 eal~~ag~~~-v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~-------------d~e~ 232 (620)
+.. +|++. |+ .+|- ..+ .++++.+++.|+. |......+... =.+|
T Consensus 287 ~~~--aGa~i~IN---DVsg---------~~d------~~m~~v~a~~g~~-vVlMh~~G~P~tmq~~~y~dvv~ev~~~ 345 (442)
T 3mcm_A 287 AKH--HDIIWMIN---DVEC---------NNI------EQKAQLIAKYNKK-YVIIHNLGITDRNQYLDKENAIDNVCDY 345 (442)
T ss_dssp HHH--GGGCCEEE---ECCC---------TTH------HHHHHHHHHHTCE-EEEECC----------------CTHHHH
T ss_pred hhC--CCCCEEEE---cCCC---------CCC------hHHHHHHHHhCCe-EEEECCCCCCccccccCcccHHHHHHHH
Confidence 632 36665 54 3331 011 2456667778875 44433222110 1478
Q ss_pred HHHHHHHHHHcCC
Q 007056 233 LYEILGEVIKVGA 245 (620)
Q Consensus 233 l~~~~~~~~~aGa 245 (620)
+.+.++.+.++|+
T Consensus 346 l~~~i~~a~~aGI 358 (442)
T 3mcm_A 346 IEQKKQILLKHGI 358 (442)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 8888899999998
No 226
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=82.47 E-value=42 Score=33.46 Aligned_cols=171 Identities=15% Similarity=0.175 Sum_probs=94.1
Q ss_pred CcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHH
Q 007056 84 LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 163 (620)
Q Consensus 84 LRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 163 (620)
+.||.+ ..+.+.-++.++.+.+.|-|+|.+|.......+.|.++++...+... . + +| |+. --.+.+-++
T Consensus 15 Fsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~-~---~-~p-isI-DT~~~~v~~ 83 (262)
T 1f6y_A 15 IKRAIQ----ERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEV-S---N-LT-LCL-DSTNIKAIE 83 (262)
T ss_dssp HHHHHH----HTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTT-C---C-SE-EEE-ECSCHHHHH
T ss_pred HHHhhh----cCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHh-C---C-Ce-EEE-eCCCHHHHH
Confidence 455544 36889999999999999999999996222122334444444333211 1 1 12 222 223566677
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCC----CHHHHHHHH
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRS----DRKFLYEIL 237 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~----d~e~l~~~~ 237 (620)
.++++. .|.+.| +++|- . + +...++++.++++|+. +...+.+ +... ..+++.+.+
T Consensus 84 aAl~a~--~Ga~iI---Ndvs~--------~--~---d~~~~~~~~~a~~~~~-vvlmh~~~~G~p~t~~~~~~~~~~~~ 144 (262)
T 1f6y_A 84 AGLKKC--KNRAMI---NSTNA--------E--R---EKVEKLFPLAVEHGAA-LIGLTMNKTGIPKDSDTRLAFAMELV 144 (262)
T ss_dssp HHHHHC--SSCEEE---EEECS--------C--H---HHHHHHHHHHHHTTCE-EEEESCCSSCSCSSHHHHHHHHHHHH
T ss_pred HHHhhC--CCCCEE---EECCC--------C--c---ccHHHHHHHHHHhCCc-EEEEcCCCCCCCCCHHHHHHHHHHHH
Confidence 777753 255544 44441 1 1 2333566777888985 5554432 1111 247788888
Q ss_pred HHHHHcCCc--EEeec---CCccccC--HHHHHHHHHHHHHhC-CCCCceeEEEecCC
Q 007056 238 GEVIKVGAT--TLNIP---DTVGITM--PTEFGKLIADIKANT-PGIENVVISTHCQN 287 (620)
Q Consensus 238 ~~~~~aGa~--~I~L~---DTvG~~~--P~~v~~li~~l~~~~-~~~~~v~i~~H~HN 287 (620)
+.+.++|.. .|.|= .+.|... ..++-+.++.+++.+ |+ .|+.+=.+|
T Consensus 145 ~~a~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg---~pvl~G~Sr 199 (262)
T 1f6y_A 145 AAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPA---PKTVLGLSN 199 (262)
T ss_dssp HHHHHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSC---CEEEEEGGG
T ss_pred HHHHHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCC---CCEEEeecC
Confidence 889999985 34332 1233322 245555666666655 44 455554444
No 227
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=82.47 E-value=8.2 Score=37.49 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=72.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 239 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~ 239 (620)
.+++.+++.++.+|.+.|.++.. |. ....+.+ .+.+..+.+++.|++.+.+++... ...+++.+.++.
T Consensus 30 ~~~~~~l~~~~~~G~~~vEl~~~----~~--~~~~~~~----~~~~~~~~l~~~gl~i~~~~~~~~--~~~~~~~~~i~~ 97 (257)
T 3lmz_A 30 FDLDTTLKTLERLDIHYLCIKDF----HL--PLNSTDE----QIRAFHDKCAAHKVTGYAVGPIYM--KSEEEIDRAFDY 97 (257)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTT----TS--CTTCCHH----HHHHHHHHHHHTTCEEEEEEEEEE--CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEecc----cC--CCCCCHH----HHHHHHHHHHHcCCeEEEEecccc--CCHHHHHHHHHH
Confidence 46788888888899999998754 11 1223332 345666778889986333433211 568899999999
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCC
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 287 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN 287 (620)
+.+.|+..|.+.- | .+.+.++.....+. ++.|.+|.|+
T Consensus 98 A~~lGa~~v~~~p--~---~~~l~~l~~~a~~~-----gv~l~lEn~~ 135 (257)
T 3lmz_A 98 AKRVGVKLIVGVP--N---YELLPYVDKKVKEY-----DFHYAIHLHG 135 (257)
T ss_dssp HHHHTCSEEEEEE--C---GGGHHHHHHHHHHH-----TCEEEEECCC
T ss_pred HHHhCCCEEEecC--C---HHHHHHHHHHHHHc-----CCEEEEecCC
Confidence 9999999988741 2 34566666655543 3779999996
No 228
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=82.32 E-value=46 Score=33.89 Aligned_cols=193 Identities=15% Similarity=0.177 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la- 95 (311)
T 3h5d_A 24 SINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-------GRVPLIAGVGTNDTRDSIEFV- 95 (311)
T ss_dssp SBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-------SSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 356677788999999999998776 4 355556665 34455555432 3357888887655444 4444
Q ss_pred HHHhcCCC-CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHc
Q 007056 167 EAVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 167 eal~~ag~-~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~a 243 (620)
+....+|. +.+-+..|-. .+.+.++.++-.....+. .++.-+-|+.. .+...+++.+.+++ +.
T Consensus 96 ~~A~~~Ga~davlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~ 161 (311)
T 3h5d_A 96 KEVAEFGGFAAGLAIVPYY-------NKPSQEGMYQHFKAIADA---SDLPIIIYNIPGRVVVELTPETMLRLA----DH 161 (311)
T ss_dssp HHHHHSCCCSEEEEECCCS-------SCCCHHHHHHHHHHHHHS---CSSCEEEEECHHHHSSCCCHHHHHHHH----TS
T ss_pred HHHHhcCCCcEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEecccccCCCCCHHHHHHHh----cC
Confidence 33355675 8887766542 234666655544433332 34554566543 24456677766654 33
Q ss_pred CCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccH
Q 007056 244 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 323 (620)
Q Consensus 244 Ga~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~l 323 (620)
...+.+.|+. ...++.++++ ..++ +..+ +-+++++ .+.++..|++.+ +.| .+|..-
T Consensus 162 -pnIvgiKdss---d~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~Ga~G~---is~----~an~~P 217 (311)
T 3h5d_A 162 -PNIIGVKECT---SLANMAYLIE----HKPE--EFLI-YTGEDGD------AFHAMNLGADGV---ISV----ASHTNG 217 (311)
T ss_dssp -TTEEEEEECS---CHHHHHHHHH----HCCS--SCEE-EECCGGG------HHHHHHHTCCEE---EES----THHHHH
T ss_pred -CCEEEEEeCC---CHHHHHHHHH----HcCC--CEEE-EECcHHH------HHHHHHcCCCEE---Eec----hhhhCH
Confidence 5789999987 4556655544 3442 2222 2233322 455677897644 443 457766
Q ss_pred HHHHHHHHh
Q 007056 324 EEVVMAFKC 332 (620)
Q Consensus 324 Eevv~~L~~ 332 (620)
+.++...+.
T Consensus 218 ~~~~~l~~a 226 (311)
T 3h5d_A 218 DEMHEMFTA 226 (311)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 229
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=82.31 E-value=2 Score=42.29 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=43.1
Q ss_pred HHHHHHHHHhHcCCCEEEEecCC----CChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~----~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
+-+++++.+.+.|++.|-+-... ....+++.++++++... .|.+.+-.-...++++.+++ .|+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------ipvi~~Ggi~~~~~~~~~l~----~Ga 102 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFL----RGA 102 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCC---------CCEEEeCCCCCHHHHHHHHH----cCC
Confidence 45789999999999999874321 12235778888776431 24444433335566766654 488
Q ss_pred CEEEE
Q 007056 175 PRIHT 179 (620)
Q Consensus 175 ~~v~i 179 (620)
+.|++
T Consensus 103 d~V~i 107 (247)
T 3tdn_A 103 DKVSI 107 (247)
T ss_dssp SEECC
T ss_pred Ceeeh
Confidence 88765
No 230
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=82.29 E-value=46 Score=33.80 Aligned_cols=197 Identities=14% Similarity=0.148 Sum_probs=120.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHHH
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 167 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 167 (620)
+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-------GKIPVIVGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEcCCCccHHHHHHHHHH
Confidence 67888889999999999999877 4 466667665 44455555432 2357888888755444 444433
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcCC
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aGa 245 (620)
...+|++.+-+..|-. .+-|.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ +. .
T Consensus 103 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~~-p 167 (306)
T 1o5k_A 103 -AEKLGANGVLVVTPYY-------NKPTQEGLYQHYKYISE---RTDLGIVVYNVPGRTGVNVLPETAARIAA---DL-K 167 (306)
T ss_dssp -HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEEECHHHHSCCCCHHHHHHHHH---HC-T
T ss_pred -HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHH---hC-C
Confidence 3456999887766632 23466666555544433 2345545665432 33567787777653 23 5
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHH
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 325 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEe 325 (620)
..+.+.||.|- ..++.++++.....-++ ..+ +-+.+++ .+.++..|++.+ +.| .+|...+.
T Consensus 168 nIvgiKdssgd--~~~~~~~~~~~~~~~~~---f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~~ 228 (306)
T 1o5k_A 168 NVVGIXEANPD--IDQIDRTVSLTKQARSD---FMV-WSGNDDR------TFYLLCAGGDGV---ISV----VSNVAPKQ 228 (306)
T ss_dssp TEEEEEECCCC--HHHHHHHHHHHHHHCTT---CEE-EESSGGG------HHHHHHHTCCEE---EES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCCCCc---EEE-EECcHHH------HHHHHHCCCCEE---Eec----HHHhhHHH
Confidence 79999999984 45777777665541112 222 3344432 555677887644 443 46777777
Q ss_pred HHHHHHh
Q 007056 326 VVMAFKC 332 (620)
Q Consensus 326 vv~~L~~ 332 (620)
++...+.
T Consensus 229 ~~~l~~a 235 (306)
T 1o5k_A 229 MVELCAE 235 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 231
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=82.21 E-value=19 Score=33.88 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=85.2
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCChhH-HHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 177 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v 177 (620)
+-.+.++.+.+.|++.|++..|..++.+ .+.++.+.+..... + ++.+ . .++++.+.++ |.+.|
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~-----~-v~v~-v-----~~~~~~a~~~----gad~v 90 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY-----D-ALFF-V-----DDRVDVALAV----DADGV 90 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT-----T-CEEE-E-----ESCHHHHHHH----TCSEE
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc-----C-CeEE-E-----cChHHHHHHc----CCCEE
Confidence 4567788899999999999988766654 34455554422110 1 1122 1 2456666655 88998
Q ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee---cCCc
Q 007056 178 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PDTV 254 (620)
Q Consensus 178 ~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L---~DTv 254 (620)
++-.. + ...+ .+ +..+ .+. .+.+++ .+++.+ ..+.+.|+|.|.+ -+|.
T Consensus 91 ~l~~~--~--------~~~~----~~----~~~~-~~~-~~~v~~-----~t~~e~----~~~~~~g~d~i~~~~~~~~~ 141 (215)
T 1xi3_A 91 QLGPE--D--------MPIE----VA----KEIA-PNL-IIGASV-----YSLEEA----LEAEKKGADYLGAGSVFPTK 141 (215)
T ss_dssp EECTT--S--------CCHH----HH----HHHC-TTS-EEEEEE-----SSHHHH----HHHHHHTCSEEEEECSSCC-
T ss_pred EECCc--c--------CCHH----HH----HHhC-CCC-EEEEec-----CCHHHH----HHHHhcCCCEEEEcCCccCC
Confidence 76321 1 1111 11 1112 343 244443 234433 2355789998875 2332
Q ss_pred cc--cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 255 GI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 255 G~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
+. ..|.. -+.++.+++.++ +++.. .-|....|...++++||+.|...
T Consensus 142 ~~~~~~~~~-~~~l~~l~~~~~----~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 142 TKEDARVIG-LEGLRKIVESVK----IPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp ---CCCCCH-HHHHHHHHHHCS----SCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred CCCCCCCcC-HHHHHHHHHhCC----CCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 11 12222 234566665542 33432 35666678888889999988653
No 232
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=82.18 E-value=3.1 Score=40.53 Aligned_cols=170 Identities=15% Similarity=0.165 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHcCCCEEEEe----cCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 99 EKLDIARQLAKLGVDIIEAG----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvG----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
+-+++++.+.+.|++.|.+= +....+.. +.++++++... .|.++...-..+++++.+++ +|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggi~~~~~~~~~l~----~Ga 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD---------VQVELSGGIRDDESLAAALA----TGC 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC---------CcEEEECCCCCHHHHHHHHH----cCC
Confidence 56788999999999999982 22223334 77888877531 14444333234556666555 488
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-EEEEcCC----C------CCCCCHHHHHHHHHHHHHc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPE----D------AGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~-~V~f~~e----d------~~r~d~e~l~~~~~~~~~a 243 (620)
+.|++-... + ...+.+.+.+ +..|.. .+..++- + ....+.+...+.++.+.++
T Consensus 98 d~V~lg~~~----l---------~~p~~~~~~~---~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 98 ARVNVGTAA----L---------ENPQWCARVI---GEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp SEEEECHHH----H---------HCHHHHHHHH---HHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CEEEECchH----h---------hChHHHHHHH---HHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 988762211 0 0012233333 333321 1122221 0 0000000345667778889
Q ss_pred CCcEEeecCCc--cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH-HHHHHHHHh---cCcEE
Q 007056 244 GATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 307 (620)
Q Consensus 244 Ga~~I~L~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a---GA~~V 307 (620)
|++.|.+-+.. |...+. -.++++.+++.. ++||-. +-|... .|...+.++ ||+.|
T Consensus 162 G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~----~ipvia----~GGI~~~~d~~~~~~~~~~Gad~v 222 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGP-NLDLLAGVADRT----DAPVIA----SGGVSSLDDLRAIATLTHRGVEGA 222 (244)
T ss_dssp TCCCEEEEETTTTTTTSCC-CHHHHHHHHTTC----SSCEEE----ESCCCSHHHHHHHHTTGGGTEEEE
T ss_pred CCCEEEEEecCCccccCCC-CHHHHHHHHHhC----CCCEEE----ECCCCCHHHHHHHHhhccCCCCEE
Confidence 99988765421 221111 234555666543 234432 245554 677777777 87665
No 233
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=82.01 E-value=12 Score=38.04 Aligned_cols=108 Identities=19% Similarity=0.105 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc----------ccCHHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG----------ITMPTEFG 263 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG----------~~~P~~v~ 263 (620)
.|.+|++..+...++- .... |..+.+.++- +++.+.+.++.+.++|+..|.|-|.++ ...++++.
T Consensus 65 vt~~em~~~~~~I~r~---~~~P-viaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~ 139 (287)
T 3b8i_A 65 ITLSEFVEQATRIGRV---ARLP-VIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGV 139 (287)
T ss_dssp SCHHHHHHHHHHHHTT---CSSC-EEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHH
T ss_pred CCHHHHHHHHHHHHhc---CCCC-EEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHH
Confidence 5788877766654432 2344 7788876644 899999999999999999999999974 34566788
Q ss_pred HHHHHHHHhCCCCCceeEEEecCC---CcchHHHHHHHHHHhcCcEE
Q 007056 264 KLIADIKANTPGIENVVISTHCQN---DLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 264 ~li~~l~~~~~~~~~v~i~~H~HN---D~GlAvANslaAv~aGA~~V 307 (620)
+.|+.+++.-.+. +..|-.-+-. .+--++.-+.+..+|||+.|
T Consensus 140 ~~I~aa~~a~~~~-~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i 185 (287)
T 3b8i_A 140 GKIRAALEARVDP-ALTIIARTNAELIDVDAVIQRTLAYQEAGADGI 185 (287)
T ss_dssp HHHHHHHHHCCST-TSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCC-CcEEEEechhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 8898888763211 2333333222 22247777778888888875
No 234
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=81.90 E-value=42 Score=34.27 Aligned_cols=200 Identities=15% Similarity=0.167 Sum_probs=104.9
Q ss_pred EEeCC----CcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee
Q 007056 79 VFDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 154 (620)
Q Consensus 79 I~DtT----LRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 154 (620)
.+.+| ++||.+. .+.+..++.++.+.+.|-++|++|.....-.+.+.++++...+.. +.+... +| | ..
T Consensus 18 riNvTg~~sf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~-~~~~~~-vp-i-sI 89 (300)
T 3k13_A 18 RCNVAGSRKFLRLVNE----KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMS-EPEIAR-VP-V-MI 89 (300)
T ss_dssp EEETTTCHHHHHHHHT----TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHT-CHHHHT-SC-E-EE
T ss_pred eccCCCCHHHHHHHhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH-hhhcCC-Ce-E-EE
Confidence 45677 6777654 478999999999999999999998632211112222222222110 000000 12 2 12
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCH--
Q 007056 155 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDR-- 230 (620)
Q Consensus 155 ~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~-- 230 (620)
--.+.+-++.++++. +|.+.|+ ++|- ...++.+ .++++.++++|+. |...+.| +...+.
T Consensus 90 DT~~~~V~eaaL~~~--~Ga~iIN---dIs~--------~~~d~~~---~~~~~l~a~~ga~-vV~mh~d~~G~p~t~~~ 152 (300)
T 3k13_A 90 DSSKWEVIEAGLKCL--QGKSIVN---SISL--------KEGEEVF---LEHARIIKQYGAA-TVVMAFDEKGQADTAAR 152 (300)
T ss_dssp ECSCHHHHHHHHHHC--SSCCEEE---EECS--------TTCHHHH---HHHHHHHHHHTCE-EEEESEETTEECCSHHH
T ss_pred eCCCHHHHHHHHHhc--CCCCEEE---eCCc--------ccCChhH---HHHHHHHHHhCCe-EEEEeeCCCCCCCCHHH
Confidence 223556677777642 4766554 4431 1112323 3566777788885 5443322 222222
Q ss_pred --HHHHHHHHHH-HHcCC--cEEee-cC--CccccCHH------HHHHHHHHHHHhCCCCCceeEEEecCC-CcchH---
Q 007056 231 --KFLYEILGEV-IKVGA--TTLNI-PD--TVGITMPT------EFGKLIADIKANTPGIENVVISTHCQN-DLGLS--- 292 (620)
Q Consensus 231 --e~l~~~~~~~-~~aGa--~~I~L-~D--TvG~~~P~------~v~~li~~l~~~~~~~~~v~i~~H~HN-D~GlA--- 292 (620)
++..++.+.+ .++|. +.|.| |= ++|....+ ++-+-++.+++.+|+ +++.+=..| .+|+-
T Consensus 153 ~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg---~pvl~G~SnkSfglp~~~ 229 (300)
T 3k13_A 153 KIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPG---AHVSGGVSNLSFSFRGNN 229 (300)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTT---CEECCBGGGGGGGGTTCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCC---CCEEEEECcccccCCCCc
Confidence 3444555554 67898 33443 22 34433332 455666777777875 445443444 24442
Q ss_pred ----HHHH---HHHHHhcCcE
Q 007056 293 ----TANT---IAGACAGARQ 306 (620)
Q Consensus 293 ----vANs---laAv~aGA~~ 306 (620)
..|+ ..|+++|.+.
T Consensus 230 ~~R~~~n~~fl~~ai~~Gld~ 250 (300)
T 3k13_A 230 YIREAMHAVFLYHAIQQGMDM 250 (300)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE
T ss_pred chhHHHHHHHHHHHHHcCCCE
Confidence 2233 4578888876
No 235
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=81.86 E-value=15 Score=35.77 Aligned_cols=199 Identities=12% Similarity=0.013 Sum_probs=107.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
+|-.+-...+-+.+.+.|++.+-.........+.+.++.+...- + ..|... .......+..++.+...+
T Consensus 18 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~---v-------dgiIi~-~~~~~~~~~~~~~~~~~~ 86 (291)
T 3l49_A 18 DWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQK---P-------DAIIEQ-LGNLDVLNPWLQKINDAG 86 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHC---C-------SEEEEE-SSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcC---C-------CEEEEe-CCChhhhHHHHHHHHHCC
Confidence 35556677788888999998766543322223345666665531 1 112211 122223344555566678
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHc-CCcEEe
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEF-SPEDAGRSDRKFLYEILGEVIKV-GATTLN 249 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~--~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~a-Ga~~I~ 249 (620)
++.|.+-....+ . ......+ +.+....+++++.+ .|...+.| ..........+.+.-+.+++.+. |...+.
T Consensus 87 iPvV~~~~~~~~-~-~~~V~~D---~~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 161 (291)
T 3l49_A 87 IPLFTVDTATPH-A-INNTTSN---NYSIGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIE 161 (291)
T ss_dssp CCEEEESCCCTT-C-SEEEEEC---HHHHHHHHHHHHHHHHTTCEEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECS
T ss_pred CcEEEecCCCCC-c-CceEecC---hHHHHHHHHHHHHHHcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEe
Confidence 997765332211 0 0011222 23456677888888 78766655 22222222234455555666666 332211
Q ss_pred ec-CCccccCHHHHHHHHHHHHHhCC---CCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 250 IP-DTVGITMPTEFGKLIADIKANTP---GIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 250 L~-DTvG~~~P~~v~~li~~l~~~~~---~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
-. -..+...+....+.+..+.+..| +.+ .+=|.||. +|.+-..+.-++|-+ |.+|.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~--di~vvg~d 224 (291)
T 3l49_A 162 PELRDVIPNTIQSAYSNVTDMLTKYPNEGDVG----AIWACWDV-PMIGATQALQAAGRT--DIRTYGVD 224 (291)
T ss_dssp SCBCCCSSSHHHHHHHHHHHHHHHCCSTTSCC----EEEESSHH-HHHHHHHHHHHTTCC--SCEEEEEE
T ss_pred eeccCCCCCCHHHHHHHHHHHHHhCCCcCCcC----EEEECCCc-hHHHHHHHHHHcCCC--CeEEEEec
Confidence 00 01233457777788887777766 432 33477663 555555556678988 99999876
No 236
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=81.82 E-value=39 Score=34.00 Aligned_cols=176 Identities=18% Similarity=0.208 Sum_probs=104.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHH
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 165 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~--------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 165 (620)
+.+.-+++++.|.++|.+.+=.++ |..++ +.++.+++.+++. |+ +.++- --....++..
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--------Gl-~~~te--~~d~~~~~~l 118 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--------GL-PVVTE--VLDPRHVETV 118 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-CEEEE--CCCGGGHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--------CC-cEEEe--cCCHHHHHHH
Confidence 899999999999999999987664 55544 2234444554443 22 12221 1234455544
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
.+. ++.+.| ++.+.. +. +.++++-..|.. |.++- +.-.+++.+...++.+...|.
T Consensus 119 ~~~-----vd~~kI--gs~~~~-----------n~----~ll~~~a~~~kP-V~lk~--G~~~t~~ei~~Ave~i~~~Gn 173 (276)
T 1vs1_A 119 SRY-----ADMLQI--GARNMQ-----------NF----PLLREVGRSGKP-VLLKR--GFGNTVEELLAAAEYILLEGN 173 (276)
T ss_dssp HHH-----CSEEEE--CGGGTT-----------CH----HHHHHHHHHTCC-EEEEC--CTTCCHHHHHHHHHHHHHTTC
T ss_pred HHh-----CCeEEE--Cccccc-----------CH----HHHHHHHccCCe-EEEcC--CCCCCHHHHHHHHHHHHHcCC
Confidence 332 466655 322211 11 234444457875 87753 223478888888888889998
Q ss_pred cEEeecC----CccccCHHHHHHH-HHHHHHhCCCCCceeEE---EecCCCcchHHHHHHHHHHhcCc--EEeecc
Q 007056 246 TTLNIPD----TVGITMPTEFGKL-IADIKANTPGIENVVIS---THCQNDLGLSTANTIAGACAGAR--QVEVTI 311 (620)
Q Consensus 246 ~~I~L~D----TvG~~~P~~v~~l-i~~l~~~~~~~~~v~i~---~H~HND~GlAvANslaAv~aGA~--~Vd~Ti 311 (620)
..+.|+- |.-...++.+.-. +..+++.+. ++|. -|.=.+.-+...-+++|+..||+ .|+.=+
T Consensus 174 ~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~----lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 174 WQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATH----LPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBS----SCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhC----CCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 7777766 2212244444433 677887642 3453 34423333446677888999999 887655
No 237
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=81.80 E-value=18 Score=37.35 Aligned_cols=135 Identities=13% Similarity=0.026 Sum_probs=83.0
Q ss_pred HHHHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCCCC--CCCCH
Q 007056 165 AWEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDA--GRSDR 230 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~ed~--~r~d~ 230 (620)
+.+..+.+|.+.|.+-.+. |+. ++...++-+.+.-.+.+.+.++.+++. .+. .|.+++.|. ...+.
T Consensus 149 aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~ 228 (338)
T 1z41_A 149 AAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDI 228 (338)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCH
T ss_pred HHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCH
Confidence 3344567899998887653 221 122335556776677777777777764 222 255677432 23567
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCcc--c---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHHHhc-
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVG--I---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 303 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG--~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aG- 303 (620)
+...++++.+.++|++.|.+.+..- . ..|....++++.+++.+. ++|..= -|. -...+..+++.|
T Consensus 229 ~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~----Ggi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 229 ADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD----MATGAV----GMITDGSMAEEILQNGR 300 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC----CEEEEC----SSCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC----CCEEEE----CCCCCHHHHHHHHHcCC
Confidence 8889999999999999999876421 1 112223456777777662 445432 122 256777888888
Q ss_pred CcEE
Q 007056 304 ARQV 307 (620)
Q Consensus 304 A~~V 307 (620)
|+.|
T Consensus 301 aD~V 304 (338)
T 1z41_A 301 ADLI 304 (338)
T ss_dssp CSEE
T ss_pred ceEE
Confidence 8876
No 238
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=81.71 E-value=3.6 Score=43.38 Aligned_cols=72 Identities=14% Similarity=0.078 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEE-ecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~-H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
+...+.++++.++|++.|.+-=+.|. +..+.+.|+++++.+|+ ++|.. -+ .....+..++++|||.|.+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~--~~~~~e~I~~ir~~~~~---~~Vi~G~V-----~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH--AKYVGKTLKSLRQLLGS---RCIMAGNV-----ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS--SHHHHHHHHHHHHHHTT---CEEEEEEE-----CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC--cHhHHHHHHHHHHhcCC---CeEEEcCc-----CCHHHHHHHHHcCCCEEEE
Confidence 55678899999999997766333453 56678899999998874 44443 12 2356789999999999998
Q ss_pred ccc
Q 007056 310 TIN 312 (620)
Q Consensus 310 Ti~ 312 (620)
++.
T Consensus 169 g~g 171 (361)
T 3r2g_A 169 GIG 171 (361)
T ss_dssp CCS
T ss_pred cCC
Confidence 644
No 239
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=81.50 E-value=21 Score=35.17 Aligned_cols=203 Identities=11% Similarity=0.088 Sum_probs=109.2
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..|-.+-...+-+.+.+.|++.+-.........+.+.++.+... .+. .|... ......+...++.+...
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~---~vd-------giIi~-~~~~~~~~~~~~~~~~~ 82 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR---GVD-------VLVII-PYNGQVLSNVVKEAKQE 82 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHT---TCS-------EEEEE-CSSTTSCHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc---CCC-------EEEEe-CCChhhhHHHHHHHHHC
Confidence 34667778888899999999877654432222334566665543 111 12211 12333334455666667
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCC-cEEe
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGA-TTLN 249 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~-~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa-~~I~ 249 (620)
|++.|.+-....+.......+.+ +.+....+++++. +.|...+.| +.........+.+.-+.+++.+.|. ..+.
T Consensus 83 ~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~~G~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~ 159 (313)
T 3m9w_A 83 GIKVLAYDRMINDADIDFYISFD---NEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 159 (313)
T ss_dssp TCEEEEESSCCTTSCCSEEEEEC---HHHHHHHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEECCcCCCCCceEEEecC---HHHHHHHHHHHHHHhCCCCcEEEEECCCCCccHHHHHHHHHHHHHhhccCCCEE
Confidence 88877653322211000011222 3445667777777 788766655 2222222233455555566666531 0122
Q ss_pred e-cCC-ccccCHHHHHHHHHHHHHhC-CCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 250 I-PDT-VGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 250 L-~DT-vG~~~P~~v~~li~~l~~~~-~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
+ ... .+-..+....+.+..+.+.. |+.+ .+=|.||. +|++-..+.-++|-+ =|.+|.|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----ai~~~~d~-~a~g~~~al~~~G~~-~di~vig~d 222 (313)
T 3m9w_A 160 VVGDQWVDGWLPENALKIMENALTANNNKID----AVVASNDA-TAGGAIQALSAQGLS-GKVAISGQD 222 (313)
T ss_dssp EEEEEECGGGCHHHHHHHHHHHHHHTTTCCC----EEEESSHH-HHHHHHHHHHTTTCT-TTSEECCCS
T ss_pred EEeeccCCCcCHHHHHHHHHHHHHhCCCCee----EEEECCCc-hHHHHHHHHHHcCCC-CCcEEEecC
Confidence 2 111 44567888888887777666 4432 44577764 455555555677876 468888876
No 240
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=81.44 E-value=31 Score=35.15 Aligned_cols=105 Identities=8% Similarity=0.024 Sum_probs=62.2
Q ss_pred HHHHhcCC--CCEEEEEecCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE--cCCC-CCCCCHHHHHHHHH
Q 007056 166 WEAVKYAK--RPRIHTFIATS--GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPED-AGRSDRKFLYEILG 238 (620)
Q Consensus 166 ~eal~~ag--~~~v~i~~~~S--d~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f--~~ed-~~r~d~e~l~~~~~ 238 (620)
++.+..+| .+.+.+.+-.. +.|.+.. +......++.+.+.++.+++.|.. |.+ ..-. ....+ +.++++
T Consensus 185 l~~L~~~g~~~~~l~isld~~~~e~~~~i~-~~~~~~~~~~~~~~i~~l~~~g~~-v~i~~~l~~g~n~~~---~~~l~~ 259 (342)
T 2yx0_A 185 LEEMIKEDKLPTQLYVSITAPDIETYNSVN-IPMIPDGWERILRFLELMRDLPTR-TVVRLTLVKGENMHS---PEKYAK 259 (342)
T ss_dssp HHHHHHTTCCCSEEEEEECCSSHHHHHHHH-CBSSSCHHHHHHHHHHHHTTCSSE-EEEEEEECTTTTCCC---HHHHHH
T ss_pred HHHHHhcCCCCCEEEEEccCCCHHHHHHHh-CCCcccHHHHHHHHHHHHHhCCCC-EEEEEEEECCccHHH---HHHHHH
Confidence 44455556 78888876653 3343222 211123456777888888888864 433 2111 12223 566666
Q ss_pred HHHHcCCcEEeec------CC------ccccCHHHHHHHHHHHHHhCCC
Q 007056 239 EVIKVGATTLNIP------DT------VGITMPTEFGKLIADIKANTPG 275 (620)
Q Consensus 239 ~~~~aGa~~I~L~------DT------vG~~~P~~v~~li~~l~~~~~~ 275 (620)
.+.+.|++.|.+- .+ ....+++++.++.+.+++.+|+
T Consensus 260 ~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~ 308 (342)
T 2yx0_A 260 LILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPG 308 (342)
T ss_dssp HHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTT
T ss_pred HHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccC
Confidence 6777898876641 11 2245678899999999988865
No 241
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=81.40 E-value=66 Score=35.19 Aligned_cols=158 Identities=20% Similarity=0.240 Sum_probs=102.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|..++..| +...+.|+|+|=+.|.. +++|...++.+.+..+.. ..|.+-. -+.+.++..-+-+..
T Consensus 189 ~ltekD~~dl-~~~~~~~vD~i~~sfVr-~a~dv~~~r~~l~~~~~~--------i~IiaKI-E~~eav~nldeIl~~-- 255 (499)
T 3hqn_D 189 AVSAKDRVDL-QFGVEQGVDMIFASFIR-SAEQVGDVRKALGPKGRD--------IMIICKI-ENHQGVQNIDSIIEE-- 255 (499)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETTCC-SHHHHHHHHHHHCGGGTT--------SEEEEEE-CSHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHH-HHHHHcCCCEEEecCCC-CHHHHHHHHHHHHhcCCC--------CeEEEEE-CCHHHHHhHHHHHHh--
Confidence 4678888887 66678999999998864 788887777766542211 1222211 123333322111211
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. ++++-.|+=++ +..+++.....++++.|+..|.. |.. |.....+-....+.+++.++.+ |+|.
T Consensus 256 sDg--ImVaRGDLgvE----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQmLeSMi~~p~PTRAEvsDVanaV~d-G~Da 327 (499)
T 3hqn_D 256 SDG--IMVARGDLGVE----IPAEKVVVAQKILISKCNVAGKP-VICATQMLESMTYNPRPTRAEVSDVANAVFN-GADC 327 (499)
T ss_dssp SSE--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCC-EEEESSSSGGGGTSSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCc--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEeehhHHHhccCCCccHHHHHHHHHHHHc-CCcE
Confidence 344 45555565443 35778888889999999999976 554 2334445667888888887764 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
+-|. .|.-.-.|-+.-+.+..+...
T Consensus 328 vMLSgETA~G~yPveaV~~m~~I~~~ 353 (499)
T 3hqn_D 328 VMLSGETAKGKYPNEVVQYMARICLE 353 (499)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCHHHHHHHHHHHHHH
Confidence 9995 677778998877777666543
No 242
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.19 E-value=41 Score=32.52 Aligned_cols=180 Identities=17% Similarity=0.132 Sum_probs=94.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEee--ccc-chhhHHHHHHHHh
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL--SRC-NERDIKTAWEAVK 170 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~r~-~~~dI~~a~eal~ 170 (620)
..|.++-.++.+...+.|++.+-+ +|. +++...+.+. .+ .+..+.++ +.. ....+..+-+++
T Consensus 16 ~~t~~~i~~l~~~a~~~g~~~v~v-~~~-------~v~~~~~~l~-~v-----~v~~v~~~P~g~~~~~~k~~~~~~A~- 80 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGIYAVCV-NPY-------HVKLASSIAK-KV-----KVCCVIGFPLGLNKTSVKVKEAVEAV- 80 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEE-CGG-------GHHHHHHHCS-SS-----EEEEEESTTTCCSCHHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEE-CHH-------HHHHHHHHhc-CC-----ceeeEecCCCCccchhhhHHHHHHHH-
Confidence 468999999999999999998775 442 2333333221 10 01111121 111 111222222332
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
..|.+.|.+++..+-. .....++.++.+....+.+. ++ .+-+-.|.. ..+.+.+.++++.+.++|+|.| -
T Consensus 81 ~~Gad~Id~viN~g~~-----~~~~~~~~~~~i~~v~~a~~--pv-~vKvi~e~~-~l~~~~~~~~a~~a~eaGad~I-~ 150 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAF-----KSEKYDFVVEELKEIFRETP--SA-VHKVIVETP-YLNEEEIKKAVEICIEAGADFI-K 150 (225)
T ss_dssp HTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHTCT--TS-EEEEECCGG-GCCHHHHHHHHHHHHHHTCSEE-E
T ss_pred HcCCCEEEEEecHHHH-----hcCChHHHHHHHHHHHHHhc--Cc-eEEEEEeCC-CCCHHHHHHHHHHHHHhCCCEE-E
Confidence 3589999876655431 11233444444333333222 33 244422211 2466779999999999999999 3
Q ss_pred cCC---ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 251 PDT---VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 251 ~DT---vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
..| .|..+++.++.+. +.+++ +++|-.=.=-.. ...++..+++||++|
T Consensus 151 tstg~~~gga~~~~i~~v~----~~v~~--~ipVia~GGI~t---~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 151 TSTGFAPRGTTLEEVRLIK----SSAKG--RIKVKASGGIRD---LETAISMIEAGADRI 201 (225)
T ss_dssp CCCSCSSSCCCHHHHHHHH----HHHTT--SSEEEEESSCCS---HHHHHHHHHTTCSEE
T ss_pred ECCCCCCCCCCHHHHHHHH----HHhCC--CCcEEEECCCCC---HHHHHHHHHhCchHH
Confidence 344 2444555555444 33321 234433221111 467788888999976
No 243
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=81.12 E-value=16 Score=34.71 Aligned_cols=158 Identities=16% Similarity=0.130 Sum_probs=85.1
Q ss_pred HHHHHHHHhHcCCCEEEEecCCCChhHH----HHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 100 KLDIARQLAKLGVDIIEAGFPAASKEDF----EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 100 Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~----e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
-++.++.+.+.|++.|++..+..++.++ +.++.+.+.... . + ++.+ . .+.++.+.++ |.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~--~---~-v~v~-v-----~~~~~~a~~~----gad 96 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACRE--A---G-VPFI-V-----NDDVELALNL----KAD 96 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHH--H---T-CCEE-E-----ESCHHHHHHH----TCS
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHH--c---C-CeEE-E-----cCHHHHHHHc----CCC
Confidence 4677888999999999999776555443 334444332110 0 1 1222 1 2456666655 889
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee---cC
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PD 252 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L---~D 252 (620)
.||+ +..+. . +. +..+..|...+.+++ .+++. +..+.+.|+|.|.+ -|
T Consensus 97 ~v~l--~~~~~--------~----~~------~~~~~~g~~~~~~s~-----~t~~e----~~~a~~~g~d~v~~~~v~~ 147 (227)
T 2tps_A 97 GIHI--GQEDA--------N----AK------EVRAAIGDMILGVSA-----HTMSE----VKQAEEDGADYVGLGPIYP 147 (227)
T ss_dssp EEEE--CTTSS--------C----HH------HHHHHHTTSEEEEEE-----CSHHH----HHHHHHHTCSEEEECCSSC
T ss_pred EEEE--CCCcc--------C----HH------HHHHhcCCcEEEEec-----CCHHH----HHHHHhCCCCEEEECCCcC
Confidence 9987 32221 1 11 111223421244444 23443 33455789999885 35
Q ss_pred Cccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 253 TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 253 TvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
|..- ..|.. -+.++.+++.+++ +++.. .-|....|...++++||+.|.+.
T Consensus 148 t~~~~~~~~~~~-~~~l~~~~~~~~~---~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 148 TETKKDTRAVQG-VSLIEAVRRQGIS---IPIVG----IGGITIDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp CCSSSSCCCCCT-THHHHHHHHTTCC---CCEEE----ESSCCTTTSHHHHHTTCSEEEES
T ss_pred CCCCCCCCCccC-HHHHHHHHHhCCC---CCEEE----EcCCCHHHHHHHHHcCCCEEEEh
Confidence 4321 22222 2455666665531 33432 25666677878888999988653
No 244
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=80.81 E-value=51 Score=33.33 Aligned_cols=193 Identities=12% Similarity=0.125 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 89 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-------GRVPVIAGAGSNNPVEAVRYAQ 89 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEccCCCCHHHHHHHHH
Confidence 367777889999999999999876 4 465666665 44455555432 2357888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ .
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~----~- 153 (297)
T 2rfg_A 90 H-AQQAGADAVLCVAGYY-------NRPSQEGLYQHFKMVHD---AIDIPIIVYNIPPRAVVDIKPETMARLAA----L- 153 (297)
T ss_dssp H-HHHHTCSEEEECCCTT-------TCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHT----S-
T ss_pred H-HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHHc----C-
Confidence 3 3456999887766532 24577776665554443 3345545665432 34557777766652 2
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|-. .++.++ ++..++ +..+ +-+.+++ .+.++..|++.+ +.| .+|...+
T Consensus 154 pnIvgiKds~gd~--~~~~~~----~~~~~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 211 (297)
T 2rfg_A 154 PRIVGVKDATTDL--ARISRE----RMLINK--PFSF-LSGDDMT------AIAYNASGGQGC---ISV----SANIAPA 211 (297)
T ss_dssp TTEEEEEECSCCT--THHHHH----HTTCCS--CCEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCCH--HHHHHH----HHhcCC--CEEE-EeCcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 5789999999853 244443 333442 2322 3344432 455777897643 443 4677666
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 212 ~~~~l~~ 218 (297)
T 2rfg_A 212 LYGQMQT 218 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 245
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=80.72 E-value=22 Score=36.25 Aligned_cols=108 Identities=14% Similarity=0.057 Sum_probs=71.3
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCH------HHHHHHHHHHHHhCCCC-CceeEEEecCCCcchHH
Q 007056 221 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMP------TEFGKLIADIKANTPGI-ENVVISTHCQNDLGLST 293 (620)
Q Consensus 221 ~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P------~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAv 293 (620)
+.+ .+..+.+--..-++.+++.||+.|-+.=-.|.+.- +.+.+-|+.+++..++. =+++|+.-.=+|.-.=.
T Consensus 91 gFP-~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~ 169 (297)
T 4eiv_A 91 NFP-EGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIIS 169 (297)
T ss_dssp STT-TCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHH
T ss_pred cCC-CCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHH
Confidence 444 33445554444566677789998887777777554 34566666666654321 14666655555555434
Q ss_pred HHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 294 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
.-+..|+++||+.|-+|-+ . ..|++.+|++..+++.
T Consensus 170 ~A~~ia~~AGADFVKTSTG-f--~~~gAT~edV~lM~~~ 205 (297)
T 4eiv_A 170 RAAVAALEGGADFLQTSSG-L--GATHATMFTVHLISIA 205 (297)
T ss_dssp HHHHHHHHHTCSEEECCCS-S--SSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEcCCC-C--CCCCCCHHHHHHHHHH
Confidence 5678899999999998864 3 3688999998877665
No 246
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=80.62 E-value=54 Score=33.57 Aligned_cols=196 Identities=16% Similarity=0.076 Sum_probs=117.0
Q ss_pred cccCCCCCC--CCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhcccccccCCccceEEeeccc-
Q 007056 85 RDGEQSPGA--TLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC- 157 (620)
Q Consensus 85 RDG~Qs~g~--~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~- 157 (620)
+.+.++-+. ..+.+.-..+++.-.+++-+.|=-.+|... ..-...++.+++.. -+|...=+-.+
T Consensus 23 ~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~---------~VPVaLHlDHg~ 93 (306)
T 3pm6_A 23 RTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAA---------SVPITLHLDHAQ 93 (306)
T ss_dssp HHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHC---------SSCEEEEEEEEC
T ss_pred HHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHC---------CCCEEEEcCCCC
Confidence 445555443 468899999999999999997644344211 11123444444431 13544444333
Q ss_pred chhhHHHHHHHH----hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCC---
Q 007056 158 NERDIKTAWEAV----KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--- 224 (620)
Q Consensus 158 ~~~dI~~a~eal----~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed--- 224 (620)
..+.+..++++. ...|...|.+ .. | ..+.||+++..++.+++|+..|+. |+- +-||
T Consensus 94 ~~e~i~~ai~~~~~~~~~~GFtSVMi-Dg-S--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaElG~igG~Edgv~ 162 (306)
T 3pm6_A 94 DPEIIKRAADLSRSETHEPGFDSIMV-DM-S--------HFSKEENLRLTRELVAYCNARGIA-TEAEPGRIEGGEDGVQ 162 (306)
T ss_dssp CHHHHHHHHHTC------CCCSEEEE-CC-T--------TSCHHHHHHHHHHHHHHHHTTTCE-EEECSSBCCCCBTTBC
T ss_pred CHHHHHHHHHhhhhccCCCCCCEEEE-eC-C--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcc
Confidence 345555555420 0117777644 32 2 246899999999999999999874 553 2232
Q ss_pred ------CCCCCHHHHHHHHHHHHHcCCcEEeec--CCccccC---HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 225 ------AGRSDRKFLYEILGEVIKVGATTLNIP--DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 225 ------~~r~d~e~l~~~~~~~~~aGa~~I~L~--DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
...|+|+.+.+++ +.|+|.+-++ -.=|... |.==.++++.+++.++. ++||-+|+= .|..-
T Consensus 163 ~~~~~~~~yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~--~vpLVlHGg--SG~p~ 234 (306)
T 3pm6_A 163 DTVDLEGVLTTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGE--RVGLVLHGA--DPFTK 234 (306)
T ss_dssp CCTTCCCBCCCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTT--TSEEEECSC--TTCCH
T ss_pred ccccccccCCCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCC--CCCEEeeCC--CCCCH
Confidence 2368999888876 3788854433 1112222 22123566667776632 378887764 56667
Q ss_pred HHHHHHHHhcCcEEe
Q 007056 294 ANTIAGACAGARQVE 308 (620)
Q Consensus 294 ANslaAv~aGA~~Vd 308 (620)
..-..|+..|+.-|+
T Consensus 235 e~i~~ai~~GV~KiN 249 (306)
T 3pm6_A 235 EIFEKCIERGVAKVN 249 (306)
T ss_dssp HHHHHHHHTTEEEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 778888888877663
No 247
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=80.57 E-value=35 Score=35.37 Aligned_cols=138 Identities=11% Similarity=0.062 Sum_probs=78.9
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEE----cCCCCCCCCHH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEF----SPEDAGRSDRK 231 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~f----~~ed~~r~d~e 231 (620)
.++++..+.+.+..+|.+.|.+-.++ ++..+...+|-+.+...+.+.++++..++. ++. |.+ +..+. .+.+
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~P-V~vKiR~g~~~~--~~~~ 144 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP-VTVKMRLGLEGK--ETYR 144 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSC-EEEEEESCBTTC--CCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCc-eEEEEecCcCcc--ccHH
Confidence 45667777777777899988876542 122223334434333445555555655553 543 433 33222 3456
Q ss_pred HHHHHHHHHHHcCCcEEeecCCc---cccCHH-------HHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHH
Q 007056 232 FLYEILGEVIKVGATTLNIPDTV---GITMPT-------EFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGA 300 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTv---G~~~P~-------~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv 300 (620)
...++++.+.++|++.|.+-+-. |+ .|. --.+++..+++.+|+ ++|..=+ |.. ...+..++
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~-~g~~~~~~~~~~~~~i~~ik~~~~~---iPVianG----gI~s~eda~~~l 216 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLAL-STKANREIPPLRHDWVHRLKGDFPQ---LTFVTNG----GIRSLEEALFHL 216 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTT---SEEEEES----SCCSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhccc-CcccccCCCcccHHHHHHHHHhCCC---CeEEEEC----CcCCHHHHHHHH
Confidence 78899999999999999987633 22 221 135678888888753 5555433 221 23334444
Q ss_pred HhcCcEE
Q 007056 301 CAGARQV 307 (620)
Q Consensus 301 ~aGA~~V 307 (620)
+ ||+.|
T Consensus 217 ~-GaD~V 222 (350)
T 3b0p_A 217 K-RVDGV 222 (350)
T ss_dssp T-TSSEE
T ss_pred h-CCCEE
Confidence 4 88776
No 248
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=80.49 E-value=51 Score=33.14 Aligned_cols=224 Identities=17% Similarity=0.155 Sum_probs=133.6
Q ss_pred ceEEEeCCCcccCCCCCCCC---CHHHHHHHHHHHhHcCCCEEEEe---cCCCCh-hH-HHHHHHHHHHhcccccccCCc
Q 007056 76 YVRVFDTTLRDGEQSPGATL---TSKEKLDIARQLAKLGVDIIEAG---FPAASK-ED-FEAVRTIAKEVGNAVDAESGY 147 (620)
Q Consensus 76 ~V~I~DtTLRDG~Qs~g~~f---s~~~Kl~Ia~~L~~~Gvd~IEvG---fP~~s~-~d-~e~v~~i~~~~~~~~~~~~~l 147 (620)
.|.|-++++-+|.-.--+++ +.++.+..++.+...|.|.||.= +....+ ++ .+.++.+.+..+.
T Consensus 27 ~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~-------- 98 (276)
T 3o1n_A 27 TVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITD-------- 98 (276)
T ss_dssp CEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCS--------
T ss_pred EEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCC--------
Confidence 47777888877764333333 45677777788888999999994 222121 12 1333444443211
Q ss_pred cceEEeecccchhh---------HHHHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE
Q 007056 148 VPVICGLSRCNERD---------IKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD 217 (620)
Q Consensus 148 ~~~i~~~~r~~~~d---------I~~a~eal~~ag-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~ 217 (620)
.|.|..+ |+..++ -...++.+...| ++-|-+-....+ +.+.+.++.++..|.+
T Consensus 99 ~PiI~T~-Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~l~~~a~~~~~k- 161 (276)
T 3o1n_A 99 KPLLFTF-RSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKATVGYAHQHNVA- 161 (276)
T ss_dssp SCEEEEC-CBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCE-
T ss_pred CCEEEEE-EEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHHHHHHHHhCCCE-
Confidence 2445433 443221 111122222336 677777544322 2345677778888874
Q ss_pred EEEcCCCCCCC-CHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHH---hCCCCCceeEEEecCCCcchHH
Q 007056 218 VEFSPEDAGRS-DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKA---NTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 218 V~f~~ed~~r~-d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~---~~~~~~~v~i~~H~HND~GlAv 293 (620)
|..|--|...+ +.+.+.+.++.+.+.|||.+-|+=+. -.+.++.++.....+ ..++ .|+-. -|--.+|.
T Consensus 162 vI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~a--~s~~Dvl~Ll~~~~~~~~~~~~---~PlIa--~~MG~~G~ 234 (276)
T 3o1n_A 162 VIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMP--QTKADVLTLLTATVEMQERYAD---RPIIT--MSMSKTGV 234 (276)
T ss_dssp EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCC---SCCEE--EECSGGGT
T ss_pred EEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC--CChHHHHHHHHHHHHHHhcCCC---CCEEE--EECCCchh
Confidence 54443333333 35788899999999999999987443 456777777765433 3343 33332 23444555
Q ss_pred HHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 294 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
-.=+.+-..|--...+++ |---..|..+++++-..|..
T Consensus 235 ~SRi~~~~~GS~vTf~~l-~~~sAPGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 235 ISRLAGEVFGSAATFGAV-KKASAPGAISVADLRTVLTI 272 (276)
T ss_dssp HHHHCHHHHTCCEEECBS-SCCSSTTCCBHHHHHHHHHH
T ss_pred hHHHHHHHhCCceEecCC-CCCCCCCCCCHHHHHHHHHH
Confidence 566666777888888887 44457899999999887764
No 249
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=80.44 E-value=3.4 Score=42.15 Aligned_cols=181 Identities=15% Similarity=0.054 Sum_probs=99.5
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 165 (620)
++.++++||+.|=+|. |...+ +....++.|++... .|.++- |+ ....+.+.
T Consensus 34 A~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~---------~PviaD~d~Gyg--~~~~~~~~ 102 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR---------LPVIADADHGYG--NALNVMRT 102 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS---------SCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHHH
Confidence 6777889999998863 32222 12345555555321 133322 33 44455555
Q ss_pred HHHHhcCCCCEEEEEecCCH---HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSG---IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIK 242 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd---~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~ 242 (620)
...+..+|+..|++-....+ -|...+ =.+.+|..++++.+++....-++. |.--. |+.....+.+++-+++..+
T Consensus 103 v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~-i~aRt-daa~~gl~~ai~Ra~ay~e 179 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALT-IIART-NAELIDVDAVIQRTLAYQE 179 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSE-EEEEE-ETTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcE-EEEec-hhhhcCHHHHHHHHHHHHH
Confidence 55555579999999887643 133223 246677777666555544322231 22211 2333456888899999999
Q ss_pred cCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 243 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 243 aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
+|||.|.+. |.-.++++.++.+. ++ +|+-+-..+..++ -+.-.--+.|+++|-...
T Consensus 180 AGAd~i~~e---~~~~~~~~~~i~~~----~~----~P~ii~~~g~~~~--~~~~eL~~lGv~~v~~~~ 235 (287)
T 3b8i_A 180 AGADGICLV---GVRDFAHLEAIAEH----LH----IPLMLVTYGNPQL--RDDARLARLGVRVVVNGH 235 (287)
T ss_dssp TTCSEEEEE---CCCSHHHHHHHHTT----CC----SCEEEECTTCGGG--CCHHHHHHTTEEEEECCC
T ss_pred cCCCEEEec---CCCCHHHHHHHHHh----CC----CCEEEeCCCCCCC--CCHHHHHHcCCcEEEECh
Confidence 999999987 44445666555544 42 2222322221211 223445566877774433
No 250
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=80.14 E-value=44 Score=35.86 Aligned_cols=202 Identities=14% Similarity=0.100 Sum_probs=116.8
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCC-HHHHHHHhC---CCHHHHHHHHHHHHHHHHHcCCCEEEE---cCCC---------
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATS-GIHMEHKLR---KTKQQVVEIARSMVKFARSLGCDDVEF---SPED--------- 224 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~S-d~h~~~~l~---~t~ee~l~~~~~~v~~a~~~G~~~V~f---~~ed--------- 224 (620)
.+.+.++.+..+|+..|||-..+. +-.+-+.-+ .+.+|.++++..+...+...|.+.|.. +..-
T Consensus 161 nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d 240 (433)
T 3eol_A 161 DAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDID 240 (433)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCS
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcc
Confidence 455556666677999999988775 432222223 478999999988877777667542222 2211
Q ss_pred ----------CC---------CCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEec
Q 007056 225 ----------AG---------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 285 (620)
Q Consensus 225 ----------~~---------r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 285 (620)
+. +...+..++-+++..+ |||.|.+ .+ |.-.++++.++.+.++..+|. ..+..-+
T Consensus 241 ~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~-e~-~~~~~eei~~f~~~v~~~~P~---~~L~~~~ 314 (433)
T 3eol_A 241 ERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWM-ET-SKPDLAQARRFAEAVHKAHPG---KLLAYNC 314 (433)
T ss_dssp TTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEE-CC-SSCCHHHHHHHHHHHHHHSTT---CCEEEEC
T ss_pred cccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEE-eC-CCCCHHHHHHHHHHhcccCCC---cccccCC
Confidence 11 1346777777777777 9999976 22 346899999999999988874 2344333
Q ss_pred CCCcchH-------HHH-HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHH
Q 007056 286 QNDLGLS-------TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMV 357 (620)
Q Consensus 286 HND~GlA-------vAN-slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v 357 (620)
--.+..- +.+ .-.--+.|+.+|-.++.+ =|+-|.++.+++..+...| ....++ |. --++-
T Consensus 315 sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~--~raa~~A~~~~a~~i~~~G------~~ayve---~Q-~~e~~ 382 (433)
T 3eol_A 315 SPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAG--FHQLNYGMFELARGYKDRQ------MAAYSE---LQ-QAEFA 382 (433)
T ss_dssp CSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHH--HHHHHHHHHHHHHHHHHHT------HHHHHH---HH-HHHHH
T ss_pred CCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHH--HHHHHHHHHHHHHHHHHcC------CHHHHH---HH-HHhhh
Confidence 2222211 111 123335799988666554 4788889999988887643 111122 11 11223
Q ss_pred HHHhCCCCCCCCcccCccceeee
Q 007056 358 EEYTGLHVQPHKAIVGANAFAHE 380 (620)
Q Consensus 358 ~~~~g~~v~~~~pivG~naF~h~ 380 (620)
.+..|+..-.|+-.+|.+-|-.-
T Consensus 383 ~~~~g~~~~~hq~~~g~~y~d~~ 405 (433)
T 3eol_A 383 AEADGYTATKHQREVGTGYFDAV 405 (433)
T ss_dssp HGGGTCCCC--------CHHHHH
T ss_pred hhccCceeeecccccccchHHHH
Confidence 45788888888888998776443
No 251
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=80.11 E-value=13 Score=36.08 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=71.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCC--HHHHHH--HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATS--GIHMEH--KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 235 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~S--d~h~~~--~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~ 235 (620)
.+++.+++.++.+|.+.|.++.... .-|... ....+.+ .+.+..+.+++.|++.+.+++. . ....+.+.+
T Consensus 22 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gl~i~~~~~~-~-~~~~~~~~~ 95 (262)
T 3p6l_A 22 FPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQ----TQKEIKELAASKGIKIVGTGVY-V-AEKSSDWEK 95 (262)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHH----HHHHHHHHHHHTTCEEEEEEEE-C-CSSTTHHHH
T ss_pred CCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHH----HHHHHHHHHHHcCCeEEEEecc-C-CccHHHHHH
Confidence 4677788888889999999874311 000000 1122322 3456667788899863344332 1 134567889
Q ss_pred HHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 236 ILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
.++.+.+.|+..|.+.- | ++.+.++.....+. ++.|.+|.|+.
T Consensus 96 ~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~~-----gv~l~~En~~~ 138 (262)
T 3p6l_A 96 MFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQY-----NIKISVHNHPQ 138 (262)
T ss_dssp HHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHHH-----TCEEEEECCSS
T ss_pred HHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHHh-----CCEEEEEeCCC
Confidence 99999999999999863 2 35566666655543 37799999853
No 252
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=80.08 E-value=29 Score=34.35 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=46.3
Q ss_pred HHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCC-ceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 236 ILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
-++.+++.||+.|-+.=-+|. ..-+.+.+-|..+++..++.. +++|+.-.=+|- .=..-+..|.++||+.|.+|-
T Consensus 100 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~e-ei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNE-EKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHH-HHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHH-HHHHHHHHHHHHCcCEEECCC
Confidence 344444556655554444443 223344444445544432210 223332221111 112233456799999999984
Q ss_pred ccccCCcCcccHHHHHHHHHh
Q 007056 312 NGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 312 ~GlGERaGNa~lEevv~~L~~ 332 (620)
+ .+ .|++.+|++-...+.
T Consensus 179 G-f~--~ggAt~~dv~lmr~~ 196 (239)
T 3ngj_A 179 G-FG--THGATPEDVKLMKDT 196 (239)
T ss_dssp S-SS--SCCCCHHHHHHHHHH
T ss_pred C-CC--CCCCCHHHHHHHHHh
Confidence 3 22 478999887655543
No 253
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=80.01 E-value=10 Score=37.29 Aligned_cols=196 Identities=16% Similarity=0.098 Sum_probs=91.6
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
+-+++++.+.+.|++.|++--+... ..+++.++.+++... .|.+.+-.-...++++.++++ |+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~---------iPvi~~ggi~~~~~i~~~~~~----Ga 97 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFLA----GA 97 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSTHHHHHHHHH----TC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC---------CCEEEECCCCCHHHHHHHHHc----CC
Confidence 4578899999999999999654321 234677777765421 244443222345667766654 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEE--cCC----------CCCCC-CHHHHHHHHHH
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEF--SPE----------DAGRS-DRKFLYEILGE 239 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G--~~~V~f--~~e----------d~~r~-d~e~l~~~~~~ 239 (620)
+.|++-...- .. +...+.+.+.++ ..| ...+.+ ++- ..+.. ......+.++.
T Consensus 98 d~v~lg~~~~--~~--------~~~~~~~~~~~~---~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 98 DKALAASVFH--FR--------EIDMRELKEYLK---KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp SEEECCCCC----------------CHHHHHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred cHhhhhHHHH--hC--------CCCHHHHHHHHH---HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 8877643221 00 001222333332 333 222222 210 00000 00013456677
Q ss_pred HHHcCCcEEeecC--CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEeeccccccC
Q 007056 240 VIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGE 316 (620)
Q Consensus 240 ~~~aGa~~I~L~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Ti~GlGE 316 (620)
+.++|++.|.+-+ ..|...+.. -++++.+++.++ +|+-.= .|.. ..+...+.++||+.|-. |=+=
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~----ipvia~----GGI~~~ed~~~~~~~Gadgv~v---gsal 232 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLTT----LPIIAS----GGAGKMEHFLEAFLAGADAALA---ASVF 232 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCCC-HHHHHHHGGGCC----SCEEEE----SCCCSHHHHHHHHHHTCSEEEE---STTT
T ss_pred HHHcCCCEEEEEeecCCCCcCCCC-HHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHcCCHHHHc---cHHH
Confidence 7789999999854 335432211 356677776542 233221 4555 36777777889887532 2111
Q ss_pred CcCcccHHHHHHHHHh
Q 007056 317 RAGNASLEEVVMAFKC 332 (620)
Q Consensus 317 RaGNa~lEevv~~L~~ 332 (620)
-.+.-+++++...|..
T Consensus 233 ~~~~~~~~~~~~~l~~ 248 (266)
T 2w6r_A 233 HFREIDMRELKEYLKK 248 (266)
T ss_dssp C---------------
T ss_pred HcCCCCHHHHHHHHHH
Confidence 1123356666655554
No 254
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=79.86 E-value=5.6 Score=40.98 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
.+++.+.+.++...+.|++.|.+.-+-| ..+|+++.++++..++. ++++.+|+|.+.+ .
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~~-----i 233 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA-----GIKVAAHAHGASG-----I 233 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT-----TCEEEEEECSHHH-----H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC-----CCEEEEEeCCHHH-----H
Confidence 4566777777777777887777664432 47889999999988874 3679999988753 4
Q ss_pred HHHHHhcCcEEe
Q 007056 297 IAGACAGARQVE 308 (620)
Q Consensus 297 laAv~aGA~~Vd 308 (620)
..++++|++.|+
T Consensus 234 ~~~~~~g~~~i~ 245 (403)
T 3gnh_A 234 REAVRAGVDTIE 245 (403)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHhCCCEEe
Confidence 567788998764
No 255
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=79.64 E-value=57 Score=33.22 Aligned_cols=76 Identities=13% Similarity=0.101 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCcc----------------ccCH---HHHHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVG----------------ITMP---TEFGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG----------------~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
.+.+.+.++++.+.++|+|.|.+..|.. +.-| ...-++++.+++.+++ +++|-.=.--.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~--~ipVi~~GGI~ 299 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG--RLPIIGVGGID 299 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTT--SSCEEEESSCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCC--CCCEEEECCCC
Confidence 4567788999999999999999887641 1111 1223566777776542 24443322222
Q ss_pred cchHHHHHHHHHHhcCcEEe
Q 007056 289 LGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 289 ~GlAvANslaAv~aGA~~Vd 308 (620)
. -..+..++.+||+.|.
T Consensus 300 ~---~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 300 S---VIAAREKIAAGASLVQ 316 (336)
T ss_dssp S---HHHHHHHHHHTCSEEE
T ss_pred C---HHHHHHHHHCCCCEEE
Confidence 2 2344556667888774
No 256
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=79.39 E-value=11 Score=38.74 Aligned_cols=110 Identities=11% Similarity=0.079 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 262 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v 262 (620)
.|.+|++..+....+-. ..... |..+.++++ .+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 69 vt~~em~~~~~~i~r~~-~~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~ 145 (307)
T 3lye_A 69 AQLHDMRDNADMIANLD-PFGPP-LIADMDTGY-GGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEY 145 (307)
T ss_dssp SCHHHHHHHHHHHHTSS-TTSCC-EEEECTTCS-SSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHH
T ss_pred CCHHHHHHHHHhhhccC-CCCCc-EEEECCCCC-CCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHH
Confidence 56777776655443211 11233 778886654 5788899999999999999999999986 3345566
Q ss_pred HHHHHHHHHhCC--CCCceeEEEecCC----CcchHHHHHHHHHHhcCcEE
Q 007056 263 GKLIADIKANTP--GIENVVISTHCQN----DLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 263 ~~li~~l~~~~~--~~~~v~i~~H~HN----D~GlAvANslaAv~aGA~~V 307 (620)
.+.|+..++.-. +. +..|-.=+-. ++--++.=+.+..+||||.|
T Consensus 146 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 146 LVRIRAAVATKRRLRS-DFVLIARTDALQSLGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp HHHHHHHHHHHHHTTC-CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhcCC-CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEE
Confidence 666766654321 11 2333322222 23346667777788888876
No 257
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=79.26 E-value=56 Score=32.87 Aligned_cols=194 Identities=12% Similarity=0.136 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la- 89 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-------GRIPVIAGTGANATAEAISLT- 89 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHH-
Confidence 478888889999999999999877 4 455566665 44455555432 2357888887755444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. .+.+.++.++-..+..+ ..++.-+-|+... +...+++.+.+++ +.
T Consensus 90 ~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 154 (292)
T 2ojp_A 90 QRFNDSGIVGCLTVTPYY-------NRPSQEGLYQHFKAIAE---HTDLPQILYNVPSRTGCDLLPETVGRLA----KV- 154 (292)
T ss_dssp HHTTTSSCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEECCHHHHSCCCCHHHHHHHH----TS-
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCcchhccCCCHHHHHHHH----cC-
Confidence 334567999887766632 23466666655544433 2345545665432 3345777776664 22
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.+++ +..++ +..+ +-+++++ .+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiK~s~gd--~~~~~~~~----~~~~~--~f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2ojp_A 155 KNIIGIXEATGN--LTRVNQIK----ELVSD--DFVL-LSGDDAS------ALDFMQYGGHGV---ISV----TANVAAR 212 (292)
T ss_dssp TTEEEC-CCSCC--THHHHHHH----TTSCT--TSBC-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEeCCCCC--HHHHHHHH----HhcCC--CEEE-EECcHHH------HHHHHHCCCcEE---EeC----HHHhhHH
Confidence 579999999985 33444443 33432 2222 3344432 456678898643 444 4677777
Q ss_pred HHHHHHHh
Q 007056 325 EVVMAFKC 332 (620)
Q Consensus 325 evv~~L~~ 332 (620)
.++...+.
T Consensus 213 ~~~~l~~a 220 (292)
T 2ojp_A 213 DMAQMCKL 220 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 258
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=79.21 E-value=13 Score=36.14 Aligned_cols=195 Identities=15% Similarity=0.157 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 98 KEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 98 ~~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+-+++++.+.+.|++.|.+--+... +..++.++.+++... .|.++.-.-...++++.+++ +|
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------ipvi~~ggI~~~~~~~~~~~----~G 96 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID---------IPFTVGGGIHDFETASELIL----RG 96 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC---------SCEEEESSCCSHHHHHHHHH----TT
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC---------CCEEEeCCCCCHHHHHHHHH----cC
Confidence 35678899999999999987433221 234566666665321 24444433334566666554 48
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC--EEEEcCC----------CCCCC-CHHHHHHHHHHH
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD--DVEFSPE----------DAGRS-DRKFLYEILGEV 240 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~--~V~f~~e----------d~~r~-d~e~l~~~~~~~ 240 (620)
++.|++-... + +..+.+.+.++ ..|.+ .+..++- ..... ......+.++.+
T Consensus 97 ad~V~lg~~~----l---------~~p~~~~~~~~---~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 97 ADKVSINTAA----V---------ENPSLITQIAQ---TFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp CSEEEESHHH----H---------HCTHHHHHHHH---HHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChHH----H---------hChHHHHHHHH---HcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 8888652211 0 00112223333 33321 1222321 00000 001234666777
Q ss_pred HHcCCcEEeecCC--ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEeeccccccCC
Q 007056 241 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 317 (620)
Q Consensus 241 ~~aGa~~I~L~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Ti~GlGER 317 (620)
.++|++.|.+-++ .|..... -.++++.+++.++ +|+-. .-|.. ..|...+.++||+.|- .|=+=-
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~----ipvia----~GGI~~~~d~~~~~~~Gadgv~---vGsal~ 228 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTT----LPIIA----SGGAGKMEHFLEAFLAGADAAL---AASVFH 228 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCC----SCEEE----ESCCCSHHHHHHHHHTTCSEEE---ESHHHH
T ss_pred HHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCChHHH---HHHHHH
Confidence 7899998887643 2433221 1345666666542 33332 25555 3788888889998763 221101
Q ss_pred cCcccHHHHHHHHHhc
Q 007056 318 AGNASLEEVVMAFKCR 333 (620)
Q Consensus 318 aGNa~lEevv~~L~~~ 333 (620)
.+.-++++....|+..
T Consensus 229 ~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 229 FREIDVRELKEYLKKH 244 (253)
T ss_dssp TTCSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHc
Confidence 1222677777777653
No 259
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=79.11 E-value=5 Score=41.24 Aligned_cols=109 Identities=15% Similarity=0.115 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 262 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v 262 (620)
.|.+|++..+..+.+-+. ... |..+.++++ .+++.+.+.++.+.++|+..|.|-|.++ ...++++
T Consensus 62 vt~~em~~~~~~I~~~~~--~~P-viaD~d~Gy-g~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~ 137 (302)
T 3fa4_A 62 CTLNDMRANAEMISNISP--STP-VIADADTGY-GGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTY 137 (302)
T ss_dssp CCHHHHHHHHHHHHTTST--TSC-EEEECTTTT-SSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhhcc--CCC-EEEECCCCC-CCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 567787776554443222 333 788887654 4788899999999999999999999985 2355667
Q ss_pred HHHHHHHHHhCC--CCCceeEEEecC----CCcchHHHHHHHHHHhcCcEE
Q 007056 263 GKLIADIKANTP--GIENVVISTHCQ----NDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 263 ~~li~~l~~~~~--~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~V 307 (620)
.+.|+..++... +. +..|-.-+- ..+--|+.=+.+..+||||.|
T Consensus 138 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 138 VTRIRAAVQARQRIGS-DIVVIARTDSLQTHGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp HHHHHHHHHHHHHHTC-CCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHHHhcCC-CEEEEEEecccccCCHHHHHHHHHHHHHcCCCEE
Confidence 777777664321 11 233333222 223336666777788888876
No 260
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=78.97 E-value=21 Score=35.05 Aligned_cols=156 Identities=13% Similarity=0.165 Sum_probs=89.7
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC--ChhHH----HHHHHHHHHhcccccccCCccce
Q 007056 77 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA--SKEDF----EAVRTIAKEVGNAVDAESGYVPV 150 (620)
Q Consensus 77 V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~--s~~d~----e~v~~i~~~~~~~~~~~~~l~~~ 150 (620)
|++.-++ |. |.-..+++.|+.=++. .+.|-|.|++-.+.. -..++ +.++++.+..+. ...+.
T Consensus 51 v~v~tvi---gF--P~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~------~~lKv 118 (226)
T 1vcv_A 51 VKLCVVA---DF--PFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG------RVVKV 118 (226)
T ss_dssp SEEEEEE---ST--TTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT------SEEEE
T ss_pred CeEEEEe---CC--CCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC------CCceE
Confidence 6666553 33 2233689999999999 999999999976432 01233 344444444321 12345
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 151 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHK----LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 151 i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~----l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
|.-.+-...+.|..+.+...++|.+-|.....-++.-.+.. -+-|.+. ++.+++.++ +.|.. +-+-+ .++
T Consensus 119 IlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~d-v~lm~~~i~---~~g~~-v~vKa-aGG 192 (226)
T 1vcv_A 119 ITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPER-AAAIARYIK---EKGYR-LGVKM-AGG 192 (226)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHH-HHHHHHHHH---HHTCC-CEEEE-ESS
T ss_pred EEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHH-HHHHHHHHH---HhCCC-ceEEE-eCC
Confidence 66666667777888888777889998776432221101111 1344444 344454444 33422 33322 233
Q ss_pred CCCHHHHHHHHHHHHHcCCc----EEeec
Q 007056 227 RSDRKFLYEILGEVIKVGAT----TLNIP 251 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~----~I~L~ 251 (620)
--+.+.++++++++ ++|++ ||.-.
T Consensus 193 irt~~~al~~i~a~-~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 193 IRTREQAKAIVDAI-GWGEDPARVRLGTS 220 (226)
T ss_dssp CCSHHHHHHHHHHH-CSCSCTTTEEEEES
T ss_pred CCCHHHHHHHHHHH-HCCCCcCCceEecC
Confidence 33478888888888 68999 77643
No 261
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=78.78 E-value=29 Score=38.24 Aligned_cols=159 Identities=19% Similarity=0.225 Sum_probs=102.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|.+++..|.+.-.+.|+|+|=+.|.. +++|...++.+.+..+.. ..|.+-. -+.+.++..-+-+..
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~g~~--------i~IIAKI-E~~eav~nldeIl~~-- 280 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASFIQ-SADDVRLIRNLLGPRGRH--------IKIIPKI-ENIEGIIHFDKILAE-- 280 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETTCC-SHHHHHHHHHHHTTTTTT--------SEEEEEE-CSHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHhcCCC--------CcEEEEE-CCHHHHHhHHHHHHh--
Confidence 4788999999788889999999998874 788887787766542211 1222211 123333322121211
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. ++++-.|+=+ -...+++...-.++++.|+..|.. |.. |.....+-....+.+++.++.+ |+|.
T Consensus 281 sDG--IMVARGDLgv----Ei~~e~vp~~Qk~iI~~c~~aGKP-Vi~ATQMLeSMi~~p~PTRAEvsDVanAVld-GaDa 352 (520)
T 3khd_A 281 SDG--IMIARGDLGM----EISPEKVFLAQKLMISKCNLQGKP-IITATQMLESMTKNPRPTRAEVTDVANAVLD-GTDC 352 (520)
T ss_dssp SSC--EEECHHHHTT----TSCGGGHHHHHHHHHHHHHHHTCC-EEECCCCCGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCc--EEEccccccc----cCCHHHHHHHHHHHHHHHHHcCCC-eEEeehhhHHHhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 233 3444333221 134567777778999999999975 544 2334445667888888888764 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
+-|. .|.-.-.|-+.-+.+..+...
T Consensus 353 vMLSgETA~G~yPveaV~~M~~I~~~ 378 (520)
T 3khd_A 353 VMLSGETAGGKFPVEAVTIMSKICLE 378 (520)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHH
T ss_pred EEecccccCCcCHHHHHHHHHHHHHH
Confidence 9995 677778998887777777654
No 262
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=78.74 E-value=32 Score=33.43 Aligned_cols=122 Identities=14% Similarity=0.084 Sum_probs=64.6
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE--EEE-cCC--CCCCCC------
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEF-SPE--DAGRSD------ 229 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~--V~f-~~e--d~~r~d------ 229 (620)
+++..++.++..|.+.|.++... + +....-..+. +.+.+..+.+++.|++. +.. .+. +....+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~-~-~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~ 86 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHN-A-RSWSAKLPSD----EAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQK 86 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCC-C-SSSCCCCCCH----HHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCC-c-ccccccCCCH----HHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHH
Confidence 45555666667799999886421 1 0000001121 23445566778888851 222 232 111122
Q ss_pred -HHHHHHHHHHHHHcCCcEEeecCC--ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 230 -RKFLYEILGEVIKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 230 -~e~l~~~~~~~~~aGa~~I~L~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
.+++.+.++.+.+.|+..|.+.-. .+......+..+++.+++-.....++.|.+|.|+.
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~ 148 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQ 148 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCC
Confidence 357778888888999998876311 12112233444455554432211258899999974
No 263
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=78.73 E-value=51 Score=32.18 Aligned_cols=188 Identities=15% Similarity=0.049 Sum_probs=110.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHH-HHHHHh
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKT-AWEAVK 170 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~-a~eal~ 170 (620)
...+.++..++.+...+.|+..+-+ +|. +++...+.+.. + .+..+.+|-. .....++. ..+. .
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv-~p~-------~v~~a~~~l~g-v-----~v~tvigFP~G~~~~~~k~~E~~~-i 76 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCV-NPI-------YAPVVRPLLRK-V-----KLCVVADFPFGALPTASRIALVSR-L 76 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-CGG-------GHHHHGGGCSS-S-----EEEEEESTTTCCSCHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE-CHH-------HHHHHHHHhCC-C-----eEEEEeCCCCCCCchHHHHHHHHH-H
Confidence 3468999999999999999999988 554 34333333211 1 0122333311 11111111 1233 4
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
..|++.|.+++....+ .....+++.+.+.+.++.+.+.+++ |.+ |...- +.+.+...++.+.++|||.|--
T Consensus 77 ~~GAdEID~Vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lK-vIl--Et~~L-t~eei~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 77 AEVADEIDVVAPIGLV-----KSRRWAEVRRDLISVVGAAGGRVVK-VIT--EEPYL-RDEERYTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp TTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEE-EEC--CGGGC-CHHHHHHHHHHHHHHTCSEEEC
T ss_pred HCCCCEEEEecchhhh-----cCCCHHHHHHHHHHHHHHHcCCCce-EEE--eccCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 5699999998865421 2345677888888888877654443 444 33333 3678999999999999998886
Q ss_pred c--CC----------ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh---cCc----EEeec
Q 007056 251 P--DT----------VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA---GAR----QVEVT 310 (620)
Q Consensus 251 ~--DT----------vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a---GA~----~Vd~T 310 (620)
. =+ .|.++|+.+.-+-+.++. .++.-.+..+==.++ ...+++-+++ ||+ +|=+|
T Consensus 148 STGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~-~g~~v~vKaaGGirt-----~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 148 STGFAEEAYAARQGNPVHSTPERAAAIARYIKE-KGYRLGVKMAGGIRT-----REQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH-HTCCCEEEEESSCCS-----HHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCCCCccccccccCCCCCCCHHHHHHHHHHHHH-hCCCceEEEeCCCCC-----HHHHHHHHHHHHCCCCcCCceEecC
Confidence 5 22 367889888655444443 332101333211222 4455555666 999 77443
No 264
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=78.59 E-value=13 Score=38.50 Aligned_cols=205 Identities=14% Similarity=0.014 Sum_probs=116.6
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 165 (620)
++.++++||+.|=+|. |...+ +..+.++.|++..++ .|.++- |+ ....+.+.
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~--------~PviaD~d~Gyg--~~~~v~~t 121 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPN--------LCVVVDGDTGGG--GPLNVQRF 121 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSS--------SEEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccC--------CCEEEeCCCCCC--CHHHHHHH
Confidence 6677889999998873 32111 224566777765322 133332 33 44455555
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 241 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~-r~d~e~l~~~~~~~~ 241 (620)
...+..+|+..|+|-...++- |+.-+-=.+.++..++++.+++....-++. |.--. |+. ....+.+++-+++..
T Consensus 122 v~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~-I~ARt-da~a~~gl~~ai~Ra~Ay~ 199 (318)
T 1zlp_A 122 IRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFF-LVART-DARAPHGLEEGIRRANLYK 199 (318)
T ss_dssp HHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCE-EEEEE-CTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcE-EEEee-HHhhhcCHHHHHHHHHHHH
Confidence 555556899999998776421 111000035677777777666655443332 22111 111 112356778888899
Q ss_pred HcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHHHhcCcEEeeccccccCCcCc
Q 007056 242 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQVEVTINGIGERAGN 320 (620)
Q Consensus 242 ~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~Vd~Ti~GlGERaGN 320 (620)
++|||.|.+. |.-.++++.++.+. ++ +|+-+-+-. +|. ..-+.-.--+.|+++|-....++ |+-+
T Consensus 200 eAGAd~i~~e---~~~~~e~~~~i~~~----l~----~P~lan~~~-~g~~~~~~~~eL~~lGv~~v~~~~~~~--raa~ 265 (318)
T 1zlp_A 200 EAGADATFVE---APANVDELKEVSAK----TK----GLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHSLTAV--YATA 265 (318)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHH----SC----SEEEEEECT-TSSSCCCCHHHHHHHTCCEEEECSHHH--HHHH
T ss_pred HcCCCEEEEc---CCCCHHHHHHHHHh----cC----CCEEEEecc-CCCCCCCCHHHHHHcCCeEEEEchHHH--HHHH
Confidence 9999999986 33455666555554 43 344332211 110 01123455567999986555543 7788
Q ss_pred ccHHHHHHHHHhcc
Q 007056 321 ASLEEVVMAFKCRG 334 (620)
Q Consensus 321 a~lEevv~~L~~~~ 334 (620)
.++++++..|...|
T Consensus 266 ~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 266 RALVNIMKILKEKG 279 (318)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcC
Confidence 88888888888765
No 265
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=78.47 E-value=34 Score=35.78 Aligned_cols=163 Identities=16% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccC------------HHHHHHHHHH
Q 007056 201 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITM------------PTEFGKLIAD 268 (620)
Q Consensus 201 ~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~------------P~~v~~li~~ 268 (620)
+...++++.|++.|+-.-.|+. .+.+.+..+++++.+.+...|.-.-..+... ...+..++..
T Consensus 7 ~~~~~ll~~A~~~~yAV~AfNv-----~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~ 81 (349)
T 3elf_A 7 EVYAEMLGQAKQNSYAFPAINC-----TSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHV 81 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHH
Q ss_pred HHHhCCCCCceeEEEec-CC-Ccch----------HHHHHHHHHHhcCcE--Eeeccccc--------------------
Q 007056 269 IKANTPGIENVVISTHC-QN-DLGL----------STANTIAGACAGARQ--VEVTINGI-------------------- 314 (620)
Q Consensus 269 l~~~~~~~~~v~i~~H~-HN-D~Gl----------AvANslaAv~aGA~~--Vd~Ti~Gl-------------------- 314 (620)
+.++++ +||.+|. |- +..+ .......++++|.+- +|+|-..+
T Consensus 82 ~A~~~~----VPVaLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvs 157 (349)
T 3elf_A 82 IAAKYP----VNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKII 157 (349)
T ss_dssp HHTTSS----SCEEEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHCC----CCEEEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCe
Q ss_pred -----cCCcCc-------------ccHHHHHHHHHhcc-----ccccC-------cccc----CCChhhHHHHHHHHHHH
Q 007056 315 -----GERAGN-------------ASLEEVVMAFKCRG-----EHILG-------GLYT----GINTRHIVMASKMVEEY 360 (620)
Q Consensus 315 -----GERaGN-------------a~lEevv~~L~~~~-----~~~~~-------G~~t----~idl~~L~~~s~~v~~~ 360 (620)
|.=.|. ++.|+.....+..+ .+.+. |.+. .+|++.|.++.+.+.+-
T Consensus 158 VEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~ 237 (349)
T 3elf_A 158 LEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAK 237 (349)
T ss_dssp EEEEESCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHH
T ss_pred EEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhh
Q ss_pred hCCC-CCCCCccc
Q 007056 361 TGLH-VQPHKAIV 372 (620)
Q Consensus 361 ~g~~-v~~~~piv 372 (620)
.|++ -....|+|
T Consensus 238 ~~~~~~~~~vpLV 250 (349)
T 3elf_A 238 LGLPADAKPFDFV 250 (349)
T ss_dssp HTCCTTCCCCCEE
T ss_pred cCCccccCCCcEE
No 266
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=78.36 E-value=8 Score=39.17 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +..+ -.+|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaG-vg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQ-VGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEE-CCCSCHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEe-eCCCCHHHHHHHHHHHHh
Confidence 35789999999999999999999999999985 6899999999999887754 4433 468888999999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+-.+ .+-++++..++
T Consensus 90 ~Gadavlv~~P~y~~~---~s~~~l~~~f~ 116 (288)
T 2nuw_A 90 MDILGVSSHSPYYFPR---LPEKFLAKYYE 116 (288)
T ss_dssp SCCSEEEECCCCSSCS---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCC---CCHHHHHHHHH
Confidence 9999986654433221 34566665444
No 267
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=77.99 E-value=11 Score=37.97 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=78.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 302 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a 302 (620)
+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +..+ -.+|+.--++..+..|-++
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~G-vg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQ-VASLNADEAIALAKYAESR 89 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEE-CCCSSHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEe-eCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999985 7899999999999988764 4444 4688889999999999999
Q ss_pred cCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 303 GARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 303 GA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
||+.+=..---+- + -.+-++++..++
T Consensus 90 Gadavlv~~P~y~-~--~~s~~~l~~~f~ 115 (286)
T 2r91_A 90 GAEAVASLPPYYF-P--RLSERQIAKYFR 115 (286)
T ss_dssp TCSEEEECCSCSS-T--TCCHHHHHHHHH
T ss_pred CCCEEEEcCCcCC-C--CCCHHHHHHHHH
Confidence 9999866544332 1 024566665444
No 268
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=77.96 E-value=16 Score=37.04 Aligned_cols=99 Identities=8% Similarity=0.031 Sum_probs=64.6
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHH
Q 007056 169 VKYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVI 241 (620)
Q Consensus 169 l~~ag~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r-~d~e~l~~~~~~~~ 241 (620)
+..+|++.|- +..|-. + ..+ ..|.+|++..+....+-+ ....|..+.++++. .+++...+-+.++.
T Consensus 33 ~e~aG~d~il--vGdSl~-~-~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 33 MDDAGVEMLL--VGDSLG-M-AVQGRKSTLPVSLRDMCYHTECVARGA---KNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHTTCCEEE--ECTTHH-H-HTTCCSSSTTCCHHHHHHHHHHHHHHC---SSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHcCCCEEE--ECHHHH-H-HHcCCCCCCCCCHHHHHHHHHHHHhhC---CCCeEEEECCCCCccCCHHHHHHHHHHHH
Confidence 3457999773 333322 2 233 357888777665544432 22235567766555 57999999999999
Q ss_pred HcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEec
Q 007056 242 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 285 (620)
Q Consensus 242 ~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 285 (620)
++||+.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 106 kaGa~aVklEdg------~e~~~~I~al~~a-----gIpV~gHi 138 (275)
T 1o66_A 106 AAGAHMVKLEGG------VWMAETTEFLQMR-----GIPVCAHI 138 (275)
T ss_dssp HTTCSEEEEECS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred HcCCcEEEECCc------HHHHHHHHHHHHc-----CCCeEeee
Confidence 999999999997 3677788888764 24555553
No 269
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=77.89 E-value=25 Score=41.82 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=78.1
Q ss_pred cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCCCCCCCCHHHHH
Q 007056 157 CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFLY 234 (620)
Q Consensus 157 ~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~ed~~r~d~e~l~ 234 (620)
.+.++...+.+.+..+|.+.|.+-++.........+|.+..+..+.+.+.++.+++. ++. .|-..+ +. +.+.
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~-~~-----~~~~ 718 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP-NV-----TDIV 718 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS-CS-----SCHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC-Ch-----HHHH
Confidence 356777777777777899988775432111112223333223345556666666654 443 123344 22 2367
Q ss_pred HHHHHHHHcCCcEEeecCCc-------------------------cccCHHH---HHHHHHHHHHhCCCCCceeEEEecC
Q 007056 235 EILGEVIKVGATTLNIPDTV-------------------------GITMPTE---FGKLIADIKANTPGIENVVISTHCQ 286 (620)
Q Consensus 235 ~~~~~~~~aGa~~I~L~DTv-------------------------G~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~H 286 (620)
++++.+.++|++.|.+.-|. |+.-|.. ..+++..+++.+++ ++|..=.-
T Consensus 719 ~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~---ipvi~~GG 795 (1025)
T 1gte_A 719 SIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPG---FPILATGG 795 (1025)
T ss_dssp HHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTT---CCEEEESS
T ss_pred HHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCC---CCEEEecC
Confidence 78889999999999884322 2222211 13677888877753 45544333
Q ss_pred CCcchHHHHHHHHHHhcCcEEee
Q 007056 287 NDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 287 ND~GlAvANslaAv~aGA~~Vd~ 309 (620)
=..+ ..+..++.+||+.|..
T Consensus 796 I~s~---~da~~~l~~Ga~~v~v 815 (1025)
T 1gte_A 796 IDSA---ESGLQFLHSGASVLQV 815 (1025)
T ss_dssp CCSH---HHHHHHHHTTCSEEEE
T ss_pred cCCH---HHHHHHHHcCCCEEEE
Confidence 3333 3445556689888754
No 270
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=77.72 E-value=51 Score=32.18 Aligned_cols=211 Identities=14% Similarity=0.069 Sum_probs=106.9
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc--------cchhhHH
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--------CNERDIK 163 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--------~~~~dI~ 163 (620)
+..++.++.++.+ .++|++.||+..+. + +.+.++.+.+..+ +......+.. ...+.++
T Consensus 28 ~~~~~~~~~l~~~---~~~G~~~vEl~~~~--~-~~~~~~~~l~~~g--------l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (301)
T 3cny_A 28 GKDNNLQQLLSDI---VVAGFQGTEVGGFF--P-GPEKLNYELKLRN--------LEIAGQWFSSYIIRDGIEKASEAFE 93 (301)
T ss_dssp TTTCCHHHHHHHH---HHHTCCEECCCTTC--C-CHHHHHHHHHHTT--------CEECEEEEEECHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHH---HHhCCCEEEecCCC--C-CHHHHHHHHHHCC--------CeEEEEeccCCCChhhHHHHHHHHH
Confidence 3457777766655 56699999997432 3 5566666665432 2111111110 0123345
Q ss_pred HHHHHHhcCCCCEEEEEecCCHH--HHHHHh----C----CCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCCCCCHHH
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGI--HMEHKL----R----KTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKF 232 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~--h~~~~l----~----~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~~r~d~e~ 232 (620)
++++.....|.+.|.+....... .....+ + ...+...+.+.+++++|++.|+. +.+-+. ...-.+++.
T Consensus 94 ~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~ 172 (301)
T 3cny_A 94 KHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLK-VAYHHHMGTGIQTKEE 172 (301)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSSSCSHHH
T ss_pred HHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCE-EEEecCCCcccCCHHH
Confidence 56666667799987765310000 000000 0 01245567777888889999974 666332 222346676
Q ss_pred HHHHHHHHHHcCCcEEeec-CCccccCHH-HHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHH-------HHHhc
Q 007056 233 LYEILGEVIKVGATTLNIP-DTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-------GACAG 303 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~-DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla-------Av~aG 303 (620)
+.++++. .+...+.++ ||.=...-. ...+.++.+.. -...+|.||..+-...+... +...+
T Consensus 173 ~~~l~~~---~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T 3cny_A 173 TDRLMAN---TDPKLVGLLYDTGHIAVSDGDYMALLNAHID-------RVVHVHFKDVRRSKEEECRAKGLTFQGSFLNG 242 (301)
T ss_dssp HHHHHHT---SCTTTCEEEEEHHHHHHHHSCSHHHHHHHGG-------GEEEEEECEECHHHHHHHHHHTCCHHHHHHTT
T ss_pred HHHHHHh---CCccceeEEechHHHHHcCCCHHHHHHHHHh-------heeEEEeecCCcchhhhhhhcccchhhHhhcC
Confidence 6666654 343333332 542211100 11223333322 34689999876542211100 01111
Q ss_pred CcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 304 ARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 304 A~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
. ..-+|+ |..+...++..|+..++
T Consensus 243 -~-----~~~~G~--G~id~~~i~~~L~~~gy 266 (301)
T 3cny_A 243 -M-----FTVPGD--GDLDFKPVYDKLIANNY 266 (301)
T ss_dssp -C-----EECTTT--SSCCCHHHHHHHHHTTC
T ss_pred -c-----cccCCC--CCccHHHHHHHHHhcCC
Confidence 1 123444 88999999999998764
No 271
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=77.65 E-value=61 Score=32.49 Aligned_cols=192 Identities=17% Similarity=0.168 Sum_probs=116.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 89 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-------GRVQVIAGAGSNCTEEAIELSV 89 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 367788889999999999999876 4 455566665 44455555432 2357888888655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ +.
T Consensus 90 ~-a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~~- 154 (289)
T 2yxg_A 90 F-AEDVGADAVLSITPYY-------NKPTQEGLRKHFGKVAE---SINLPIVLYNVPSRTAVNLEPKTVKLLAE---EY- 154 (289)
T ss_dssp H-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHH---HC-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHH---hC-
Confidence 3 3456999887766632 23466776665554443 3345545665432 34567787777653 22
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|-. .++.++++.. + ..+ +-+++++ .+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiK~s~gd~--~~~~~~~~~~-----~---f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P~ 210 (289)
T 2yxg_A 155 SNISAVKEANPNL--SQVSELIHDA-----K---ITV-LSGNDEL------TLPIIALGGKGV---ISV----VANIVPK 210 (289)
T ss_dssp TTEEEEEECCSCT--HHHHHHHHHT-----C---SEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCCH--HHHHHHHHhC-----C---eEE-EECcHHH------HHHHHHCCCCEE---EeC----hhhhhHH
Confidence 5789999999853 4555555432 2 122 3344432 455778897643 443 4677776
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 211 ~~~~l~~ 217 (289)
T 2yxg_A 211 EFVEMVN 217 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 272
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=77.54 E-value=16 Score=35.16 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCcEEeecCCccccCH--HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 235 EILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 235 ~~~~~~~~aGa~~I~L~DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
+.++.+.++||+.|.+-=.. ...| ..+.++++.+++.+|+ .++.+-+|+ ...+..+.++||+.|..++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~-~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~ 162 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK-RDRHDGLDIASFIRQVKEKYPN---QLLMADIST-----FDEGLVAHQAGIDFVGTTLS 162 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS-SCCTTCCCHHHHHHHHHHHCTT---CEEEEECSS-----HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEEcccc-cCCCCCccHHHHHHHHHHhCCC---CeEEEeCCC-----HHHHHHHHHcCCCEEeeecc
Confidence 34566778999988763221 1123 2457889999988864 556666665 34478899999999976777
Q ss_pred ccc
Q 007056 313 GIG 315 (620)
Q Consensus 313 GlG 315 (620)
|+.
T Consensus 163 g~~ 165 (234)
T 1yxy_A 163 GYT 165 (234)
T ss_dssp TSS
T ss_pred ccC
Confidence 763
No 273
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=77.34 E-value=7.4 Score=40.80 Aligned_cols=89 Identities=17% Similarity=0.240 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCc
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 305 (620)
...|.+...+-++++.++|++.|.++ +-. .+-.+-+..+++.++ +||..-.|-|.-+|++ |+++|++
T Consensus 41 ~T~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~----vPlvaDiHf~~~lal~----a~e~G~d 107 (366)
T 3noy_A 41 KTHDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP----MPVIADIHFAPSYAFL----SMEKGVH 107 (366)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS----SCEEEECCSCHHHHHH----HHHTTCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC----CCEEEeCCCCHHHHHH----HHHhCCC
Confidence 34678888899999999999988872 222 345788899999874 7898888989888765 8999999
Q ss_pred EEeeccccccCCcCcc----cHHHHHHHHHhcc
Q 007056 306 QVEVTINGIGERAGNA----SLEEVVMAFKCRG 334 (620)
Q Consensus 306 ~Vd~Ti~GlGERaGNa----~lEevv~~L~~~~ 334 (620)
. ..||. ||. ..++|+...+.++
T Consensus 108 k--lRINP-----GNig~~~~~~~vv~~ak~~~ 133 (366)
T 3noy_A 108 G--IRINP-----GNIGKEEIVREIVEEAKRRG 133 (366)
T ss_dssp E--EEECH-----HHHSCHHHHHHHHHHHHHHT
T ss_pred e--EEECC-----cccCchhHHHHHHHHHHHcC
Confidence 9 56674 776 3567777777665
No 274
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=77.21 E-value=8.2 Score=39.16 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 225 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 225 ~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
.+..|.+-+.++++.+++.|++-|.++-|+|= ++++|-.++++.+.+...+ +..+ -++|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaG-vg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQ-VGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEE-CCCSCHHHHHHHHHHGGG
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEe-cCCCCHHHHHHHHHHHHh
Confidence 35789999999999999999999999999985 6899999999999987754 4433 478888899999999999
Q ss_pred hcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 302 AGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+||+.+=..---+-.+ .+-++++..++
T Consensus 90 ~Gadavlv~~P~y~~~---~s~~~l~~~f~ 116 (293)
T 1w3i_A 90 FDIVGIASYAPYYYPR---MSEKHLVKYFK 116 (293)
T ss_dssp SCCSEEEEECCCSCSS---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCC---CCHHHHHHHHH
Confidence 9999986654433221 24556655444
No 275
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=77.16 E-value=17 Score=38.14 Aligned_cols=80 Identities=8% Similarity=0.042 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCCccccCHHH---HHHHHHHHHHhCCCCCceeEEE-----
Q 007056 231 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMPTE---FGKLIADIKANTPGIENVVIST----- 283 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L-------------------~DTvG~~~P~~---v~~li~~l~~~~~~~~~v~i~~----- 283 (620)
+.+.+.++.+.++|.|.|-| .|-.|....++ +.++|+.+|+.++. + +|++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-~v~vrls~~ 237 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSA--D-RIGIRVSPI 237 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCG--G-GEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCC--C-cEEEEEccc
Confidence 45556677778999998877 15556554333 66789999999864 2 4555
Q ss_pred ecCCCc---chHH----HHHHHHHHhcCcEEeecccc
Q 007056 284 HCQNDL---GLST----ANTIAGACAGARQVEVTING 313 (620)
Q Consensus 284 H~HND~---GlAv----ANslaAv~aGA~~Vd~Ti~G 313 (620)
..+++. +... .-+...-++|++.|+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 274 (364)
T 1vyr_A 238 GTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 274 (364)
T ss_dssp SCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 233321 2233 23455567899999987543
No 276
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=77.13 E-value=14 Score=38.14 Aligned_cols=136 Identities=16% Similarity=0.165 Sum_probs=82.1
Q ss_pred HHHHHHHHHh-HcCCCEEEEec----CCC---ChhH-HHHHHHHHHHhcccccccCCccceEEee--c--ccchhhHHHH
Q 007056 99 EKLDIARQLA-KLGVDIIEAGF----PAA---SKED-FEAVRTIAKEVGNAVDAESGYVPVICGL--S--RCNERDIKTA 165 (620)
Q Consensus 99 ~Kl~Ia~~L~-~~Gvd~IEvGf----P~~---s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~--r~~~~dI~~a 165 (620)
+..++++.+. +.|.|+|.+|. |.+ ++++ .+.++.+.+... +| |+.- + -.+.+-++.+
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~---------vP-lsIDg~~~~T~~~eV~eaA 150 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG---------VP-LVVVGCGDVEKDHEVLEAV 150 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC---------SC-EEEECCSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC---------ce-EEEECCCCCCCCHHHHHHH
Confidence 4788888888 99999999985 432 2223 345666655421 12 2222 1 1234556667
Q ss_pred HHHHhcCCC-CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHc
Q 007056 166 WEAVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 166 ~eal~~ag~-~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~a 243 (620)
+++. ++. +.|. +.+. + +..++++.++++|.. |.. .+. |.+++.++.+.+.++
T Consensus 151 leag--ag~~~lIN---sv~~------------~---~~~~m~~laa~~g~~-vVlmh~~-----d~~~~~~l~~~a~~~ 204 (323)
T 4djd_D 151 AEAA--AGENLLLG---NAEQ------------E---NYKSLTAACMVHKHN-IIARSPL-----DINICKQLNILINEM 204 (323)
T ss_dssp HHHT--TTSCCEEE---EEBT------------T---BCHHHHHHHHHHTCE-EEEECSS-----CHHHHHHHHHHHHTT
T ss_pred HHhc--CCCCCeEE---ECCc------------c---cHHHHHHHHHHhCCe-EEEEccc-----hHHHHHHHHHHHHHc
Confidence 7762 222 2333 3332 0 122556677788875 444 442 478999999999999
Q ss_pred CC--cEEeecC---CccccCHHHHHHHHHHHHH
Q 007056 244 GA--TTLNIPD---TVGITMPTEFGKLIADIKA 271 (620)
Q Consensus 244 Ga--~~I~L~D---TvG~~~P~~v~~li~~l~~ 271 (620)
|. +.|.|== ++| ...++-.++++.++.
T Consensus 205 GI~~e~IIlDPg~g~fg-k~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 205 NLPLDHIVIDPSIGGLG-YGIEYSFSIMERIRL 236 (323)
T ss_dssp TCCGGGEEEECCCCCTT-TTHHHHHHHHHHHHH
T ss_pred CCCHHHEEEeCCCcccc-CCHHHHHHHHHHHHH
Confidence 98 5666532 334 367788888888875
No 277
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=77.06 E-value=66 Score=32.55 Aligned_cols=191 Identities=14% Similarity=0.178 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~st~~ai~la~ 105 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-------DRAKLIAGVGTNNTRTSVELAE 105 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEecCCCCCHHHHHHHHH
Confidence 478888899999999999998866 4 455666665 44455555432 3357888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. .+.+.++.++-..+..+ ..++.-+-|+... +...+++.+.++++ .
T Consensus 106 ~-A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~----~- 169 (304)
T 3cpr_A 106 A-AASAGADGLLVVTPYY-------SKPSQEGLLAHFGAIAA---ATEVPICLYDIPGRSGIPIESDTMRRLSE----L- 169 (304)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSSCCCHHHHHHHTT----S-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHc----C-
Confidence 3 3567999887776632 24566666665554433 3355545665432 33457777766642 2
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++.. .+ .+ +-+++++ .+.++..|++.+ +.| .+|...+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~~--~f------~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 225 (304)
T 3cpr_A 170 PTILAVXDAKGD--LVAATSLIKET--GL------AW-YSGDDPL------NLVWLALGGSGF---ISV----IGHAAPT 225 (304)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHH--CC------EE-EECSGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCC--HHHHHHHHHhc--CE------EE-EECcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 579999999984 45666666543 22 12 3344433 355677887643 443 4677766
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 226 ~~~~l~~ 232 (304)
T 3cpr_A 226 ALRELYT 232 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 278
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=77.02 E-value=12 Score=37.46 Aligned_cols=140 Identities=19% Similarity=0.102 Sum_probs=97.1
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC---CCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~---ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
++.+.+-..+|-++- ++ .+++-++.++++|+. |.++- |.+... ..+.++++.+.+.|-+.|-+
T Consensus 39 ID~lKfg~Gt~~l~~--------~~---~l~eki~l~~~~gV~-v~~GGTl~E~~~~q--g~~~~yl~~~k~lGf~~iEi 104 (251)
T 1qwg_A 39 IDFVKFGWGTSAVID--------RD---VVKEKINYYKDWGIK-VYPGGTLFEYAYSK--GKFDEFLNECEKLGFEAVEI 104 (251)
T ss_dssp CSEEEECTTGGGGSC--------HH---HHHHHHHHHHTTTCE-EEECHHHHHHHHHT--TCHHHHHHHHHHHTCCEEEE
T ss_pred cceEEecCceeeecC--------HH---HHHHHHHHHHHcCCe-EECCcHHHHHHHHc--CcHHHHHHHHHHcCCCEEEE
Confidence 566777666654432 22 355788999999984 66632 211111 25567777888899999999
Q ss_pred cCCccccCHHHHHHHHHHHHHh-CCCCCceeEEEecC-------CCcchHHHHHHHHHHhcCcEE--ee---c-cccccC
Q 007056 251 PDTVGITMPTEFGKLIADIKAN-TPGIENVVISTHCQ-------NDLGLSTANTIAGACAGARQV--EV---T-INGIGE 316 (620)
Q Consensus 251 ~DTvG~~~P~~v~~li~~l~~~-~~~~~~v~i~~H~H-------ND~GlAvANslaAv~aGA~~V--d~---T-i~GlGE 316 (620)
.|-.--+.+++-.++|+.+++. + .+.-++.-- -|...-+-.....++|||+.| ++ . ..||=+
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~G~----~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~ 180 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDNGF----MVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFD 180 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTC----EEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBC
T ss_pred CCCcccCCHHHHHHHHHHHHHCCC----EEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCC
Confidence 9999999999999999999887 3 233444322 244566778889999999996 33 2 237778
Q ss_pred CcCcccHHHHHHHHH
Q 007056 317 RAGNASLEEVVMAFK 331 (620)
Q Consensus 317 RaGNa~lEevv~~L~ 331 (620)
..||.-...+-..+.
T Consensus 181 ~~g~~r~d~v~~i~~ 195 (251)
T 1qwg_A 181 KEGKVKENELDVLAK 195 (251)
T ss_dssp TTSCBCHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHH
Confidence 999999887654444
No 279
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=77.01 E-value=33 Score=33.74 Aligned_cols=102 Identities=16% Similarity=0.149 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCC-ceeEEEecC----CCcchHHHHHHHH
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQ----NDLGLSTANTIAG 299 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~-~v~i~~H~H----ND~GlAvANslaA 299 (620)
.+.+--..-++.+++.||+.|-+.=-+|. ..-+.+.+-|..+++..++.. +++|+...- ++- .=..-+..|
T Consensus 77 ~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~e-ei~~a~~ia 155 (231)
T 3ndo_A 77 HVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEP-LLADVCRVA 155 (231)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHH-HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHH-HHHHHHHHH
Confidence 34454455566788899999988877887 456778888888887765321 344443222 222 223355778
Q ss_pred HHhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 300 ACAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 300 v~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
.++||+.|-+|-+ .+. .|++.+|++-.+.+.
T Consensus 156 ~~aGADfVKTSTG-f~~-~~gAt~edv~lm~~~ 186 (231)
T 3ndo_A 156 RDAGADFVKTSTG-FHP-SGGASVQAVEIMART 186 (231)
T ss_dssp HHTTCSEEECCCS-CCT-TCSCCHHHHHHHHHH
T ss_pred HHHCcCEEEcCCC-CCC-CCCCCHHHHHHHHHH
Confidence 8999999988852 221 477888887654443
No 280
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=76.83 E-value=13 Score=39.01 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=64.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~a 172 (620)
.++.++-+++++.|.+.|++.||-.+| +.|++..+++.+... +| |++=.+. ...+++..++ ..
T Consensus 200 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iP-I~~de~i~~~~~~~~~i~---~~ 263 (384)
T 2pgw_A 200 GWSVHDAINMCRKLEKYDIEFIEQPTV---SWSIPAMAHVREKVG---------IP-IVADQAAFTLYDVYEICR---QR 263 (384)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHCS---------SC-EEESTTCCSHHHHHHHHH---TT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCcCCHHHHHHHHH---cC
Confidence 468899999999999999999996543 567888888877532 13 3332222 3455555544 33
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
.++.|.+=. .+---+..+.+++++|+++|+. +..+.
T Consensus 264 ~~d~v~ik~-------------~~~GGit~~~~i~~~A~~~g~~-~~~~~ 299 (384)
T 2pgw_A 264 AADMICIGP-------------REIGGIQPMMKAAAVAEAAGLK-ICIHS 299 (384)
T ss_dssp CCSEEEECH-------------HHHTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCCEEEEcc-------------hhhCCHHHHHHHHHHHHHCCCe-Eeecc
Confidence 466665411 1111255677889999999986 66654
No 281
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=76.71 E-value=18 Score=36.38 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCC----hhHHHHHHHHHHHhcccccccCCccceEEeeccc---chhh-HHH
Q 007056 102 DIARQLAKLGVDIIEAGF---------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC---NERD-IKT 164 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGf---------P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~---~~~d-I~~ 164 (620)
.-++.++++|||.|=+|. |... .+....++.+++..... +.++.+.-. +.++ ++.
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNC--------LLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTS--------EEEEECCTTSSSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCC--------cEEEECCCCCcCCHHHHHHH
Confidence 347888999999999984 2222 22244566666643221 223333221 2222 333
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE----EcCCC---------CCCCC--
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRSD-- 229 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~----f~~ed---------~~r~d-- 229 (620)
+.+.++ +|+..|++-... ...+.|+.+.+.|+. |. +.|.+ .+|++
T Consensus 100 a~rl~k-aGa~aVklEgg~------------------e~~~~I~al~~agip-V~gHiGLtPq~v~~~ggf~v~grt~~~ 159 (264)
T 1m3u_A 100 AATVMR-AGANMVKIEGGE------------------WLVETVQMLTERAVP-VCGHLGLTPQSVNIFGGYKVQGRGDEA 159 (264)
T ss_dssp HHHHHH-TTCSEEECCCSG------------------GGHHHHHHHHHTTCC-EEEEEESCGGGHHHHTSSCCCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCcH------------------HHHHHHHHHHHCCCC-eEeeecCCceeecccCCeEEEeCCHHH
Confidence 344555 899999876541 234566777778875 43 22221 23554
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCC
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 274 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~ 274 (620)
.+.+++-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLEC-----VPV---ELAKRITEALA 196 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 36788888889999999999853 354 34556666664
No 282
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=76.46 E-value=17 Score=37.80 Aligned_cols=125 Identities=6% Similarity=0.049 Sum_probs=82.2
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCC-EEEEcCCCCCCCCHHHHHHHHHHHHHc--CCcE
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRKFLYEILGEVIKV--GATT 247 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~-~G~~-~V~f~~ed~~r~d~e~l~~~~~~~~~a--Ga~~ 247 (620)
-|+..+.++. ++ +....-|.+.+++++-+.+.++.+++ .|+. .+.+++. -..+++...+.++.+.+. ++..
T Consensus 93 dgV~y~Eir~--~P-~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~~a~~~l~~a~~~~~~vvG 167 (343)
T 3rys_A 93 GGVRHAEIMM--DP-QAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL--RDMSEDSALEVLDQLLAMHAPIAG 167 (343)
T ss_dssp TTEEEEEEEE--CH-HHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE--TTSCHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCEEEEEEe--cH-HHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC--CCCCHHHHHHHHHHHHhCCCCEEE
Confidence 3555455543 33 22334578999999999999987764 5753 2344543 234677788888887775 3444
Q ss_pred EeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEEe
Q 007056 248 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 308 (620)
Q Consensus 248 I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd 308 (620)
|.|+=.=....|..+.+.++..++. ++++-+|+.-..+ ..|...|+. .|+++|.
T Consensus 168 ~dL~g~E~~~~~~~~~~~~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 168 IGLDSAEVGNPPSKFERLYQRAAEA-----GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp EEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred EecCCcccCCCHHHHHHHHHHHHHC-----CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 5443222345788888888887764 3678999987654 457788897 8999863
No 283
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=76.30 E-value=79 Score=35.01 Aligned_cols=158 Identities=19% Similarity=0.197 Sum_probs=100.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|.+++..| +.-.+.|+|+|=+.|.. +++|...++.+.+..+.. ..|.+-. -+.+.++..-+-+..
T Consensus 239 alTekD~~dl-~f~~~~~vD~ia~SfVr-~a~Dv~~~r~~L~~~g~~--------i~IIAKI-E~~eav~nldeIl~~-- 305 (550)
T 3gr4_A 239 AVSEKDIQDL-KFGVEQDVDMVFASFIR-KASDVHEVRKVLGEKGKN--------IKIISKI-ENHEGVRRFDEILEA-- 305 (550)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETTCC-SHHHHHHHHHHHTTTTTT--------SEEEEEE-CSHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHH-HHHHHcCCCEEEecCCC-CHHHHHHHHHHHHhcCCC--------ceEEEEe-CCHHHHHHHHHHHHh--
Confidence 4677887777 46678899999998764 788887787766542211 1222211 123333322121211
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. ++++-.|+=++ +..+++.....++++.|+..|.. |.. |.....+-....+.+++.++.+ |+|.
T Consensus 306 sDg--ImVaRGDLgve----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQMLeSMi~~p~PTRAEvsDVanAvld-G~Da 377 (550)
T 3gr4_A 306 SDG--IMVARGDLGIE----IPAEKVFLAQKMMIGRCNRAGKP-VICATQMLESMIKKPRPTRAEGSDVANAVLD-GADC 377 (550)
T ss_dssp SSE--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSTTGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEccchhccc----CCHHHHHHHHHHHHHHHHHhCCC-EEEEehhhHHhhcCCCccHHHHHHHHHHHHc-CCcE
Confidence 343 45555565443 23466777778899999999976 544 2334445667888888888764 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
+-|. .|.-.-.|-+.-+.+..+...
T Consensus 378 vMLSgETA~G~yPveaV~~M~~I~~~ 403 (550)
T 3gr4_A 378 IMLSGETAKGDYPLEAVRMQHLIARE 403 (550)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHHH
Confidence 9995 577778998877777766644
No 284
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=76.25 E-value=20 Score=37.85 Aligned_cols=131 Identities=10% Similarity=0.029 Sum_probs=81.4
Q ss_pred HHHHHh-cCCCCEEEEEecC--------CHHH--H-HHHhCC-CHHHHHHHHHHHHHHHHHc-CCC--EEEEcCCCC---
Q 007056 165 AWEAVK-YAKRPRIHTFIAT--------SGIH--M-EHKLRK-TKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA--- 225 (620)
Q Consensus 165 a~eal~-~ag~~~v~i~~~~--------Sd~h--~-~~~l~~-t~ee~l~~~~~~v~~a~~~-G~~--~V~f~~ed~--- 225 (620)
+.+..+ .+|.+.|.|-.+. |+.. + ...+|- +.+.-.+.+.+.++.+|+. |-+ .|.+++.+.
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 334456 7899999887653 2221 1 223444 7777777778888877764 321 356677531
Q ss_pred --CCCCHHHHHHHHHHHHHcCCcEEeecCCc--cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 226 --GRSDRKFLYEILGEVIKVGATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 226 --~r~d~e~l~~~~~~~~~aGa~~I~L~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
...+.+...++++.+.++|++.|.+.-.. +-..|. + ++.+++.++ ++|..=.- + -...+..+++
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~----iPvi~~G~--i--t~~~a~~~l~ 326 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYS----GVKISNLR--Y--DFEEADQQIR 326 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCC----SCEEEESS--C--CHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCC----CcEEEECC--C--CHHHHHHHHH
Confidence 24567888899999999999999887521 011232 4 677787763 34432221 1 2566777888
Q ss_pred hc-CcEE
Q 007056 302 AG-ARQV 307 (620)
Q Consensus 302 aG-A~~V 307 (620)
.| |+.|
T Consensus 327 ~g~aD~V 333 (379)
T 3aty_A 327 EGKVDAV 333 (379)
T ss_dssp TTSCSEE
T ss_pred cCCCeEE
Confidence 87 7766
No 285
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=76.22 E-value=42 Score=33.73 Aligned_cols=143 Identities=13% Similarity=0.016 Sum_probs=77.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec--CCC-C-----hhH-HHHHHHHHHHhcccccccCCccceEEeecccchhhHH
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGF--PAA-S-----KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 163 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf--P~~-s-----~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 163 (620)
...+.++.++-++.|.+.|++.|-+.. +.. . ..+ .+.++.+.+. . ++ ..+. +.-+++..+.
T Consensus 31 r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~-----~---gi-~~ir-~~~~~p~~l~ 100 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL-----N---GE-FWIR-VMYLHPDHLT 100 (304)
T ss_dssp CBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS-----S---SS-CEEE-ECCCCGGGCC
T ss_pred eeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc-----C---CC-cEEE-EeeeecccCC
Confidence 457899999999999999999876531 110 1 111 2334444331 1 11 1221 2223444432
Q ss_pred -HHHHHHhcCC--CCEEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCEEEEcCCCCC-CCCHHHHHHH
Q 007056 164 -TAWEAVKYAK--RPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAG-RSDRKFLYEI 236 (620)
Q Consensus 164 -~a~eal~~ag--~~~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~--~G~~~V~f~~ed~~-r~d~e~l~~~ 236 (620)
..++.++.+| .+.+++-+-+ |+ .+...+++. ...+.+.+.++.+++ .|+. +..+..-+. .-+.+.+.+.
T Consensus 101 ~e~l~~l~~~g~~~~~l~i~lqs~s~-~vl~~m~r~--~t~e~~~~~i~~l~~~~~gi~-i~~~~IvG~PgEt~ed~~~t 176 (304)
T 2qgq_A 101 EEIISAMLELDKVVKYFDVPVQHGSD-KILKLMGRT--KSSEELKKMLSSIRERFPDAV-LRTSIIVGFPGETEEDFEEL 176 (304)
T ss_dssp HHHHHHHHHCTTBCCEEECCCBCSCH-HHHHHTTCC--SCHHHHHHHHHHHHHHCTTCE-EEEEEEECCTTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCccEEEEecccCCH-HHHHHhCCC--CCHHHHHHHHHHHHhhCCCCE-EEEEEEEeCCCCCHHHHHHH
Confidence 3356677778 7888886544 44 333445542 113445556777777 4553 322211111 3455677778
Q ss_pred HHHHHHcCCcEEe
Q 007056 237 LGEVIKVGATTLN 249 (620)
Q Consensus 237 ~~~~~~aGa~~I~ 249 (620)
++.+.+.+.+.+.
T Consensus 177 ~~~l~~l~~~~v~ 189 (304)
T 2qgq_A 177 KQFVEEIQFDKLG 189 (304)
T ss_dssp HHHHHHHCCSEEE
T ss_pred HHHHHHcCCCEEE
Confidence 8888888876554
No 286
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=75.91 E-value=4.4 Score=41.98 Aligned_cols=71 Identities=15% Similarity=0.229 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHH----HHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 303 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li----~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG 303 (620)
+++.+.+++.+++||+.|.+.|+.|. +.|+.+.+++ +.+.+.+. ++++ +|+.-+.+.- --.-.+.|
T Consensus 190 ~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~---~~~i-ih~~g~~~~~---l~~~~~~g 262 (348)
T 4ay7_A 190 EASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN---SVTV-LHICGNVNPI---LSDMADCG 262 (348)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS---SEEE-EECCSCCHHH---HHHHHTSC
T ss_pred HHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc---CCcE-EEecCCcHHH---HHHHHHhc
Confidence 45566677788899999999999875 8899988765 44445554 3443 6766443221 11223568
Q ss_pred CcEEe
Q 007056 304 ARQVE 308 (620)
Q Consensus 304 A~~Vd 308 (620)
++.++
T Consensus 263 ~d~i~ 267 (348)
T 4ay7_A 263 FEGLS 267 (348)
T ss_dssp CSEEE
T ss_pred ccccc
Confidence 87764
No 287
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=75.67 E-value=3.1 Score=41.45 Aligned_cols=163 Identities=14% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHhHcCCCEEEE----ecCCCChhH-HHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCE
Q 007056 102 DIARQLAKLGVDIIEA----GFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 176 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEv----GfP~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~ 176 (620)
+-++.|.++|+|++.+ |...-+-.. .+.++.|.+..++. +--+-+- ..+.+..++....+|++.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~--------~ldvHLm---v~~p~~~i~~~~~aGAd~ 112 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA--------GMDVHLM---VKPVDALIESFAKAGATS 112 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCS--------CEEEEEE---CSSCHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCC--------eEEEEEe---eCCHHHHHHHHHHcCCCE
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee----c
Q 007056 177 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI----P 251 (620)
Q Consensus 177 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L----~ 251 (620)
|++-. |..+.+.+.++.+|+.|++. |..+| .++.+.+.+++. .+|.|.+ |
T Consensus 113 itvH~----------------Ea~~~~~~~i~~ir~~G~k~Gvalnp----~Tp~e~l~~~l~-----~vD~VlvMsV~P 167 (246)
T 3inp_A 113 IVFHP----------------EASEHIDRSLQLIKSFGIQAGLALNP----ATGIDCLKYVES-----NIDRVLIMSVNP 167 (246)
T ss_dssp EEECG----------------GGCSCHHHHHHHHHTTTSEEEEEECT----TCCSGGGTTTGG-----GCSEEEEECSCT
T ss_pred EEEcc----------------ccchhHHHHHHHHHHcCCeEEEEecC----CCCHHHHHHHHh-----cCCEEEEeeecC
Q ss_pred CCccccCHHHHHHHHHHHHHhCCCCCc----eeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 252 DTVGITMPTEFGKLIADIKANTPGIEN----VVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 252 DTvG~~~P~~v~~li~~l~~~~~~~~~----v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
..-|-..-.+.-+.|+.+++..+ + ++|++ |-|....|.-.++++||+.+
T Consensus 168 GfgGQ~fi~~~l~KI~~lr~~~~---~~~~~~~I~V----DGGI~~~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 168 GFGGQKFIPAMLDKAKEISKWIS---STDRDILLEI----DGGVNPYNIAEIAVCGVNAF 220 (246)
T ss_dssp TC--CCCCTTHHHHHHHHHHHHH---HHTSCCEEEE----ESSCCTTTHHHHHTTTCCEE
T ss_pred CCCCcccchHHHHHHHHHHHHHH---hcCCCeeEEE----ECCcCHHHHHHHHHcCCCEE
No 288
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=75.65 E-value=31 Score=35.22 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCC---CCCCHHHHHHHHHHHHHc
Q 007056 203 ARSMVKFARSLGCDDVEFSPEDA---GRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~ed~---~r~d~e~l~~~~~~~~~a 243 (620)
+.+.++.|++.|.+.+-.-+..- .+.+.+.+.+.++++.++
T Consensus 92 ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a 135 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA 135 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHh
Confidence 34455566666665444433332 344556666666555543
No 289
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=75.62 E-value=16 Score=37.81 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSP--EDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIA 267 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~--ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~ 267 (620)
++.+|+++.+ +.+++.|+..|.|+. .+....+.+++.++++.+.+.|.. +.+ |.|.++++.+..+.+
T Consensus 99 ~s~eei~~~~----~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~-i~~--t~G~l~~e~l~~L~~ 167 (369)
T 1r30_A 99 MEVEQVLESA----RKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLE-ACM--TLGTLSESQAQRLAN 167 (369)
T ss_dssp CCHHHHHHHH----HHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSE-EEE--ECSSCCHHHHHHHHH
T ss_pred CCHHHHHHHH----HHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCe-EEE--ecCCCCHHHHHHHHH
Confidence 5667766544 445567877777732 122346789999999999988875 343 899988876655543
No 290
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=75.52 E-value=13 Score=39.03 Aligned_cols=125 Identities=14% Similarity=0.076 Sum_probs=78.8
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--EEEEcCCCCC----C-CCH
Q 007056 169 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDAG----R-SDR 230 (620)
Q Consensus 169 l~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~--~V~f~~ed~~----r-~d~ 230 (620)
.+.+|.+.|.|-.+. |+. ++...+|-|.+.-.+.+.+.|+.+|+. |.+ .|.+++.+.. . .+.
T Consensus 162 a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~ 241 (362)
T 4ab4_A 162 AKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRA 241 (362)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHH
T ss_pred HHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcH
Confidence 456899999987764 332 223345667777777777777777764 321 3667876421 1 225
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcEE
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 307 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 307 (620)
+...++++.+.++|++.|.+.... .-| ++++.+++.++ ++|-.=. |.-...+..+++.| ||.|
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~----iPvi~~G----git~e~a~~~l~~g~aD~V 305 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFG----GPYIVNE----RFDKASANAALASGKADAV 305 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHC----SCEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCC----CCEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 678899999999999999886533 112 45677777764 2332211 12356677888887 7765
No 291
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=75.49 E-value=1e+02 Score=33.94 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=105.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|.+++.++.+.-.+.|||+|=+.|.. +++|...+|.+.+..+........-...|+-.. +.+.++..-+-+..
T Consensus 212 ~lTekD~~D~l~fa~~~~vD~ialSFVr-~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE--~~~av~NldeIi~~-- 286 (526)
T 4drs_A 212 IIGDKDRHDIVDFALKYNLDFIALSFVQ-NGADVQLCRQIISENTQYSNGIPSSIKIISKIE--NLEGVINFDSICSE-- 286 (526)
T ss_dssp SSCHHHHHHHHHTTTTTTCSEEEETTCC-SHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEEC--SHHHHHTHHHHHHH--
T ss_pred cccchhHHHHHHHHHHhccCeeeecccC-chhhHHHHHHHHHhhCcccccccccceeeeehh--ccHHHHHHHHHHhh--
Confidence 5677888888888889999999998875 788888888877653211000000011222222 22333221111221
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. +.++=-|+=++ ...|++-..-++.++.|+..|.. |.. |.....+-....+-+++.++.+ |+|.
T Consensus 287 sDg--IMVARGDLgvE----ip~e~vp~~QK~II~~c~~~gKP-VI~ATQmLeSMi~np~PTRAEvsDVAnAV~D-GaDa 358 (526)
T 4drs_A 287 SDG--IMVARGDLGME----IPPEKIFVAQKCMISKCNVAGKP-VVTATQMLESMIKSNRPTRAEMTDVANAVLD-GSDC 358 (526)
T ss_dssp SSE--EEEECTTHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESCTTGGGGSSSSCCHHHHHHHHHHHHH-TCSE
T ss_pred ccE--EEEECCccccc----CCHHHHHHHHHHHHHHHHHcCCe-EEEhhhhhHHHhhCCCCCCchHHHHHHHHHh-CCce
Confidence 244 34455554443 34566667778899999999986 554 2224446667888888888765 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
|.|. -|.=.-.|-+.-+.+..+...
T Consensus 359 vMLSgETA~G~yPveaV~~m~~I~~~ 384 (526)
T 4drs_A 359 VMLSGETANGAFPFDAVNVMSRVCAQ 384 (526)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHH
T ss_pred EEEcchhhcccCHHHHHHHHHHHHHH
Confidence 9998 677778898877777776654
No 292
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.49 E-value=71 Score=32.13 Aligned_cols=193 Identities=12% Similarity=0.078 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHHH-HHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFE-AVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~e-~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+. .++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 92 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-------APSRIVTGVLVDSIEDAADQSA 92 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-------CGGGEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCccHHHHHHHHH
Confidence 478888899999999999999877 4 4555666653 4454444322 3457888888755444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHc
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~a 243 (620)
. ...+|++.+-+..|-. ++ .+.++.++-..+..+..-.-++.-+-|+.. .+...+++.+.++++ +.
T Consensus 93 ~-A~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~---~~ 161 (294)
T 3b4u_A 93 E-ALNAGARNILLAPPSY-------FKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKA---AF 161 (294)
T ss_dssp H-HHHTTCSEEEECCCCS-------SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHH---HC
T ss_pred H-HHhcCCCEEEEcCCcC-------CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHH---hC
Confidence 3 3567999887766532 23 477776666555444320003554566543 233567777777653 23
Q ss_pred CCc-EEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCccc
Q 007056 244 GAT-TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 322 (620)
Q Consensus 244 Ga~-~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~ 322 (620)
.. .+.+.||.|- ..++.+++... ++ ..+ +-+++ ...+.++..|++.+ +.| .+|..
T Consensus 162 -pn~ivgiKds~gd--~~~~~~~~~~~----~~---f~v-~~G~d------~~~l~~l~~G~~G~---is~----~~n~~ 217 (294)
T 3b4u_A 162 -PGIVTGVKDSSGN--WSHTERLLKEH----GD---LAI-LIGDE------RDLARGVRLGGQGA---ISG----VANFL 217 (294)
T ss_dssp -TTTEEEEEECCCC--HHHHHHHHHHH----TT---SEE-EECCH------HHHHHHHHTTCCEE---EES----GGGTC
T ss_pred -CCcEEEEEECCCC--HHHHHHHHHhC----CC---eEE-EEccH------HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 46 8999999984 34566655443 21 222 22332 23566788997543 444 45666
Q ss_pred HHHHHH
Q 007056 323 LEEVVM 328 (620)
Q Consensus 323 lEevv~ 328 (620)
.+.++.
T Consensus 218 P~~~~~ 223 (294)
T 3b4u_A 218 TQEVRA 223 (294)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 293
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=75.35 E-value=39 Score=35.42 Aligned_cols=140 Identities=15% Similarity=0.052 Sum_probs=79.3
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-----CCC-EEEEcCCCCCCCCHHH
Q 007056 159 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-----GCD-DVEFSPEDAGRSDRKF 232 (620)
Q Consensus 159 ~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-----G~~-~V~f~~ed~~r~d~e~ 232 (620)
.+|...+++.+.. ..+.|.+-+++-...-.. +-.+ .+.+..+.+.++.+++. .+. .|-..| ..+.+.
T Consensus 163 ~~dy~~~~~~~~~-~ad~ielNisCPn~~G~~-~l~~-~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p----~~~~~~ 235 (367)
T 3zwt_A 163 AEDYAEGVRVLGP-LADYLVVNVSSPNTAGLR-SLQG-KAELRRLLTKVLQERDGLRRVHRPAVLVKIAP----DLTSQD 235 (367)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGG-GGGS-HHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS----CCCHHH
T ss_pred HHHHHHHHHHHhh-hCCEEEEECCCCCCCCcc-ccCC-HHHHHHHHHHHHHHHhhccccCCceEEEEeCC----CCCHHH
Confidence 4555555555533 356666554432111000 1122 34455566666555432 222 133455 245678
Q ss_pred HHHHHHHHHHcCCcEEeecCCc---------------ccc----CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 233 LYEILGEVIKVGATTLNIPDTV---------------GIT----MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTv---------------G~~----~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
+.++++.+.++|+|.|.+-.|. |.+ .+....++|+.+++.+++ +++|-.=.-=.. .
T Consensus 236 ~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~--~ipvI~~GGI~s---~ 310 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG--RVPIIGVGGVSS---G 310 (367)
T ss_dssp HHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT--CSCEEEESSCCS---H
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC--CceEEEECCCCC---H
Confidence 8999999999999999988775 211 122345788999988864 355543222221 3
Q ss_pred HHHHHHHHhcCcEEeec
Q 007056 294 ANTIAGACAGARQVEVT 310 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~T 310 (620)
.-++.++++||+.|...
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 56778888999988643
No 294
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=75.17 E-value=74 Score=32.17 Aligned_cols=193 Identities=13% Similarity=0.108 Sum_probs=115.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 100 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-------GKIKLIAHVGCVSTAESQQLAA 100 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888889999999999999887 3 455566665 44455555432 2357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~aG 244 (620)
. ...+|++.+-+..|-. ++.|.++.++-..+..+.. + ++.-+-|+... +...+++.+.++++ .
T Consensus 101 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~-~-~lPiilYn~P~~tg~~l~~~~~~~La~----~- 165 (303)
T 2wkj_A 101 S-AKRYGFDAVSAVTPFY-------YPFSFEEHCDHYRAIIDSA-D-GLPMVVYNIPALSGVKLTLDQINTLVT----L- 165 (303)
T ss_dssp H-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH-T-TCCEEEEECHHHHCCCCCHHHHHHHHT----S-
T ss_pred H-HHhCCCCEEEecCCCC-------CCCCHHHHHHHHHHHHHhC-C-CCCEEEEeCccccCCCCCHHHHHHHhc----C-
Confidence 3 3456999887766632 2447777666665554433 2 15545665332 33456777766642 2
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.|- ..++.++++. .++ ..+ +-+.+++ .+.++..|++.+ +.| .+|..-+
T Consensus 166 pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~v-~~G~d~~------~~~~l~~G~~G~---is~----~an~~P~ 222 (303)
T 2wkj_A 166 PGVGALXQTSGD--LYQMEQIRRE----HPD---LVL-YNGYDNI------FASGLLAGADGG---IGS----TYNIMGW 222 (303)
T ss_dssp TTEEEEEECCCC--HHHHHHHHHH----CTT---CEE-EECCGGG------HHHHHHHTCCEE---EET----THHHHHH
T ss_pred CCEEEEeCCCCC--HHHHHHHHHh----CCC---eEE-EeCcHHH------HHHHHHCCCCEE---EeC----HHHhCHH
Confidence 579999999984 4455555542 232 222 2234332 456677787644 443 3566666
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 223 ~~~~l~~ 229 (303)
T 2wkj_A 223 RYQGIVK 229 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555443
No 295
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=75.14 E-value=9.3 Score=38.15 Aligned_cols=166 Identities=14% Similarity=0.131 Sum_probs=78.9
Q ss_pred HHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC-CCCEEEEEec
Q 007056 104 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA-KRPRIHTFIA 182 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a-g~~~v~i~~~ 182 (620)
.+.|++.|.|.||+|.|.+.+... .++.+.+.+.. + .. .+.|+..+ ..+.++..+..+..+.+ +.+.|.+.+.
T Consensus 29 ~~~l~~~Gad~ielg~pr~~~~g~-~~~~~~~~l~~-~-~~-~~~pn~~~--~~~~~~~~~f~~~a~~agg~~~i~l~i~ 102 (264)
T 1xm3_A 29 KEAVAVSESDILTFAVRRMNIFEA-SQPNFLEQLDL-S-KY-TLLPNTAG--ASTAEEAVRIARLAKASGLCDMIKVEVI 102 (264)
T ss_dssp HHHHHHHTCSEEEEETTSSTTC--------CTTCCG-G-GS-EEEEECTT--CSSHHHHHHHHHHHHHTTCCSSEEECCB
T ss_pred HHHHHHcCCeEEEEcccccccCCC-CHHHHHHHHHh-c-CC-eEcCCccc--cCCHHHHHHHHHHHHHcCCCCeEEEeec
Confidence 368899999999999986643111 11111111111 0 00 11122221 12233222223333333 3445555332
Q ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc---CCCEEE-EcCCCCCCCCHHHHHHHHHHHHHcCCcEEee-cCCcc--
Q 007056 183 TSGIHMEHKLRKTKQQVVEIARSMVKFARSL---GCDDVE-FSPEDAGRSDRKFLYEILGEVIKVGATTLNI-PDTVG-- 255 (620)
Q Consensus 183 ~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~---G~~~V~-f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG-- 255 (620)
... ... ++...+.++.++++ |+. +. ++.. +.+ .++++.++|++.|.- .-..|
T Consensus 103 ~d~-------~~~----~~e~~~~~~~a~~~~~~g~~-vi~~~~~-----~~~----~a~~~~~~gad~v~~~~~~~Gt~ 161 (264)
T 1xm3_A 103 GCS-------RSL----LPDPVETLKASEQLLEEGFI-VLPYTSD-----DVV----LARKLEELGVHAIMPGASPIGSG 161 (264)
T ss_dssp CCT-------TTC----CBCHHHHHHHHHHHHHTTCC-EEEEECS-----CHH----HHHHHHHHTCSCBEECSSSTTCC
T ss_pred CCC-------ccc----ccchHHHHHHHHHHHCCCeE-EEEEcCC-----CHH----HHHHHHHhCCCEEEECCcccCCC
Confidence 211 000 12233556666666 876 44 3331 233 356667789887622 11122
Q ss_pred --ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEe
Q 007056 256 --ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVE 308 (620)
Q Consensus 256 --~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd 308 (620)
...|+ .++.+++.. + +|+.+- .|.. -.++..++++||+.|-
T Consensus 162 ~~~~~~~----~l~~i~~~~-~---iPviv~----gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 162 QGILNPL----NLSFIIEQA-K---VPVIVD----AGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp CCCSCHH----HHHHHHHHC-S---SCBEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCCHH----HHHHHHhcC-C---CCEEEE----eCCCCHHHHHHHHHcCCCEEE
Confidence 22333 666666643 2 333332 5665 5788888999999863
No 296
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.07 E-value=22 Score=36.81 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=23.6
Q ss_pred EEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 176 RIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 176 ~v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
.|.++. ..-|-|......++.++.++.+..+ -+.|++.++++
T Consensus 8 ~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L----~~~Gvd~IEvG 50 (345)
T 1nvm_A 8 KLYISDVTLRDGSHAIRHQYTLDDVRAIARAL----DKAKVDSIEVA 50 (345)
T ss_dssp BCEEEECTTTHHHHHTTTCCCHHHHHHHHHHH----HHHTCSEEECS
T ss_pred CcEEEECCCCcccCCCCCCCCHHHHHHHHHHH----HHcCCCEEEEe
Confidence 344443 3345555555567777665544433 34688777773
No 297
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=75.03 E-value=55 Score=32.67 Aligned_cols=103 Identities=18% Similarity=0.117 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCC--CC-CceeEEEecCCCcchHHHHHHHHH
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTP--GI-ENVVISTHCQNDLGLSTANTIAGA 300 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~--~~-~~v~i~~H~HND~GlAvANslaAv 300 (620)
..+.+--..-++.+++.||+.|-+.=-.|. ..-..+.+-|..+++..+ +. =+++|+.-.=+|.-.=..-+..|+
T Consensus 81 ~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~ 160 (260)
T 1p1x_A 81 NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISI 160 (260)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHH
Confidence 345554445556677788887766666663 334556666666665432 11 134555554455543335677899
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHHHh
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 332 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~ 332 (620)
++||+.|-+|- |. ..|++.+|++..+.+.
T Consensus 161 eaGADfVKTST-Gf--~~~gAt~e~v~lm~~~ 189 (260)
T 1p1x_A 161 KAGADFIKTST-GK--VAVNATPESARIMMEV 189 (260)
T ss_dssp HTTCSEEECCC-SC--SSCCCCHHHHHHHHHH
T ss_pred HhCCCEEEeCC-CC--CCCCCCHHHHHHHHHH
Confidence 99999999885 22 2488999987765554
No 298
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=74.95 E-value=75 Score=32.16 Aligned_cols=191 Identities=13% Similarity=0.155 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 166 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 166 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ ++.+
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 103 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-------DRARVIAGAGTYDTAHSIRLA- 103 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHH-
Confidence 578888999999999999998876 3 344456665 44455555432 3357888877555444 3433
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--CCCCCCHHHHHHHHHHHHHcC
Q 007056 167 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--d~~r~d~e~l~~~~~~~~~aG 244 (620)
+....+|++.+-+..|-. ++-+.++.++-..+..+. .++.-+-|+.. .+...+++.+.+++ +.
T Consensus 104 ~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 168 (304)
T 3l21_A 104 KACAAEGAHGLLVVTPYY-------SKPPQRGLQAHFTAVADA---TELPMLLYDIPGRSAVPIEPDTIRALA----SH- 168 (304)
T ss_dssp HHHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHTS---CSSCEEEEECHHHHSSCCCHHHHHHHH----TS-
T ss_pred HHHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----cC-
Confidence 333456999887766642 234666655544433332 24554566543 24456677776654 23
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHH
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
...+.+.||.| ...++.+++. . ++ ..+ +-+++++ .+.++..|++.+ +.+ .+|..-+
T Consensus 169 pnIvgiKdssg--d~~~~~~~~~--~---~~---f~v-~~G~d~~------~l~~l~~Ga~G~---is~----~~n~~P~ 224 (304)
T 3l21_A 169 PNIVGVXDAKA--DLHSGAQIMA--D---TG---LAY-YSGDDAL------NLPWLRMGATGF---ISV----IAHLAAG 224 (304)
T ss_dssp TTEEEEEECSC--CHHHHHHHHH--H---HC---CEE-EESSGGG------HHHHHHHTCCEE---EES----THHHHHH
T ss_pred CCEEEEECCCC--CHHHHHHHhc--C---CC---eEE-EeCchHH------HHHHHHcCCCEE---Eec----HHhhhHH
Confidence 47999999998 4566666661 2 22 222 3344322 456788898654 333 4677666
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 225 ~~~~l~~ 231 (304)
T 3l21_A 225 QLRELLS 231 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 299
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=74.89 E-value=30 Score=34.95 Aligned_cols=136 Identities=17% Similarity=0.178 Sum_probs=80.6
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEeecc---cchhhH-HH
Q 007056 102 DIARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSR---CNERDI-KT 164 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r---~~~~dI-~~ 164 (620)
.-|+.++++|||.|=+|. |...+ +....++.+++..++. +.++.+-- .+.+++ +.
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~--------~vvaD~pfgsY~s~~~a~~~ 111 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRA--------LIVADLPFGTYGTPADAFAS 111 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSS--------EEEEECCTTSCSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCC--------CEEEecCCCCCCCHHHHHHH
Confidence 357888999999998883 32222 2234566666643221 23333221 244443 34
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE----EcCC-----C----CCCCC--
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPE-----D----AGRSD-- 229 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~----f~~e-----d----~~r~d-- 229 (620)
+.+.++ +|+..|++-...+ ..+.|+.+.+.|+. |+ +.|. . .+|++
T Consensus 112 a~rl~k-aGa~aVklEdg~~------------------~~~~i~~l~~~GIp-v~gHlgltPq~~~~~gg~~vqgrt~~~ 171 (275)
T 3vav_A 112 AVKLMR-AGAQMVKFEGGEW------------------LAETVRFLVERAVP-VCAHVGLTPQSVHAFGGFKVQGKTEAG 171 (275)
T ss_dssp HHHHHH-TTCSEEEEECCGG------------------GHHHHHHHHHTTCC-EEEEEESCGGGHHHHC---CCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCchh------------------HHHHHHHHHHCCCC-EEEecCCCceEEeccCCeEEEcCCHHH
Confidence 445555 5999999876532 23566677778886 43 1221 1 23554
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhC
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANT 273 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~ 273 (620)
.+.+++-++++.++||+.|.+. +.|.+ +++.+.+.+
T Consensus 172 a~~~i~rA~a~~eAGA~~ivlE-----~vp~~---~a~~It~~l 207 (275)
T 3vav_A 172 AAQLLRDARAVEEAGAQLIVLE-----AVPTL---VAAEVTREL 207 (275)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-----SCCHH---HHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCEEEec-----CCCHH---HHHHHHHhC
Confidence 3677788888899999999986 34654 455555555
No 300
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=74.78 E-value=34 Score=34.34 Aligned_cols=198 Identities=11% Similarity=0.055 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
+|-.+-...+-+.+.+.|++.+-. .....++ +.+.++.+... .+. | |..+..... +..++.+...
T Consensus 81 ~~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~i~~l~~~---~vd---G----iIi~~~~~~---~~~~~~l~~~ 146 (344)
T 3kjx_A 81 MVFPEVLTGINQVLEDTELQPVVG-VTDYLPEKEEKVLYEMLSW---RPS---G----VIIAGLEHS---EAARAMLDAA 146 (344)
T ss_dssp SSHHHHHHHHHHHHTSSSSEEEEE-ECTTCHHHHHHHHHHHHTT---CCS---E----EEEECSCCC---HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEE-eCCCCHHHHHHHHHHHHhC---CCC---E----EEEECCCCC---HHHHHHHHhC
Confidence 455666777888889999987543 3333332 34455554432 111 2 211221111 1334445567
Q ss_pred CCCEEEEEec-CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCC-CCCCCHHHHHHHHHHHHHcCCcEEe
Q 007056 173 KRPRIHTFIA-TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED-AGRSDRKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 173 g~~~v~i~~~-~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~ 249 (620)
+++.|.+... ..+.. .....+ +.+....+++++.++|...+.| +... ......+.+.-+.+++.+.|.....
T Consensus 147 ~iPvV~i~~~~~~~~~--~~V~~D---~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~ 221 (344)
T 3kjx_A 147 GIPVVEIMDSDGKPVD--AMVGIS---HRRAGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKNGVEIED 221 (344)
T ss_dssp SSCEEEEEECSSCCSS--EEEEEC---HHHHHHHHHHHHHHHTCCSCCEEESSTTTCHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCEEEEeCCCCCCCC--CEEEEC---cHHHHHHHHHHHHHCCCCeEEEEecCcccCccHHHHHHHHHHHHHHcCCCCCh
Confidence 8998876321 11100 011222 3345667788888888865554 3221 1222345666677778888854211
Q ss_pred ecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 250 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 250 L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
..--.|-..++.-++.+..+.+..|+.+ .+=|.|| .+|+.-..++-++|.+. =|.+|.|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nd-~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 222 REFYSGGSALAKGREMTQAMLERSPDLD----FLYYSND-MIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHSTTCC----EEEESSH-HHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred heEEeCCCCHHHHHHHHHHHHhcCCCCC----EEEECCH-HHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 1111244567777777777766655432 3447776 45555555566788753 267788876
No 301
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=74.36 E-value=63 Score=31.66 Aligned_cols=198 Identities=11% Similarity=0.024 Sum_probs=99.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCC-CChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPA-ASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
|-.+....+-+.+.+.|++.+-. .+. ..++ +.+.++.+... .+ ..|.... .....+...++.+...
T Consensus 14 ~~~~~~~gi~~~~~~~g~~~~~~-~~~~~~~~~~~~~i~~l~~~---~v-------dgiIi~~-~~~~~~~~~~~~~~~~ 81 (313)
T 2h3h_A 14 YWSQVEQGVKAAGKALGVDTKFF-VPQKEDINAQLQMLESFIAE---GV-------NGIAIAP-SDPTAVIPTIKKALEM 81 (313)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEE-CCSSSCHHHHHHHHHHHHHT---TC-------SEEEECC-SSTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEE-CCCCCCHHHHHHHHHHHHHc---CC-------CEEEEeC-CChHHHHHHHHHHHHC
Confidence 44455566777788899875433 332 2332 33455555442 11 1122211 2223333344545556
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~ 249 (620)
+++.|.+-....+.........+- .+....+++++.+. |...|.| ..........+...-+.+++.+.|...+.
T Consensus 82 ~iPvV~~~~~~~~~~~~~~V~~d~---~~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~ 158 (313)
T 2h3h_A 82 GIPVVTLDTDSPDSGRYVYIGTDN---YQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVD 158 (313)
T ss_dssp TCCEEEESSCCTTSCCSCEEECCH---HHHHHHHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCeEEEeCCCCCCcceeEEECcCH---HHHHHHHHHHHHHHcCCCCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEE
Confidence 888776532211100000122232 34455677777777 7766655 22112222234454555666666765433
Q ss_pred ecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 250 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 250 L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
.. .+-..+....+.+..+.+..|+.+ .+=|.||. +|+.-..+.-++|.. =|.+|.|++
T Consensus 159 ~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~G~p-~dv~vvg~d 216 (313)
T 2h3h_A 159 IL--NDEEDGARAVSLAEAALNAHPDLD----AFFGVYAY-NGPAQALVVKNAGKV-GKVKIVCFD 216 (313)
T ss_dssp EE--ECSSCHHHHHHHHHHHHHHCTTCC----EEEECSTT-HHHHHHHHHHHTTCT-TTSEEEEEC
T ss_pred ee--cCCCCHHHHHHHHHHHHHHCcCce----EEEEcCCC-ccHHHHHHHHHcCCC-CCeEEEEeC
Confidence 21 234567777788877776666432 44477775 555444444566731 156777765
No 302
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=74.09 E-value=36 Score=34.56 Aligned_cols=107 Identities=14% Similarity=0.108 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHcCCC--EEEEcCCCCCCCCHHHHH-HHHHHHHH--cCCcEEeecCCccccCHHHHHHHHHHHHH
Q 007056 197 QQVVEIARSMVKFARSLGCD--DVEFSPEDAGRSDRKFLY-EILGEVIK--VGATTLNIPDTVGITMPTEFGKLIADIKA 271 (620)
Q Consensus 197 ee~l~~~~~~v~~a~~~G~~--~V~f~~ed~~r~d~e~l~-~~~~~~~~--aGa~~I~L~DTvG~~~P~~v~~li~~l~~ 271 (620)
+..++.+.+.++.+..+|.. .+.|.|-... .+.+..+ .+++.+.+ .-..+|.|--|.|..+++++.++++.+.
T Consensus 138 e~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~-~~~e~~~~r~~e~l~~~~~a~~~l~lEn~~~~~t~~el~~l~~~~~- 215 (301)
T 2j6v_A 138 ERSLAELRYSARLLSLLGAEDGVLVLHLGGAY-GEKGKALRRFVENLRGEEEVLRYLALENDERLWNVEEVLKAAEALG- 215 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEECCCCT-TCHHHHHHHHHHHHTTCHHHHHHEEEECCSSSCCHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEECCCcCC-CCHHHHHHHHHHHHhHHHhhcceEEEEeCCCCCCHHHHHHHHhcCC-
Confidence 45567777888888888854 5666553211 1133222 22222222 1012788888888888988888888763
Q ss_pred hCCCCCceeEEEecCCCc--chHHHHHHHHHHh---cCcEEeec
Q 007056 272 NTPGIENVVISTHCQNDL--GLSTANTIAGACA---GARQVEVT 310 (620)
Q Consensus 272 ~~~~~~~v~i~~H~HND~--GlAvANslaAv~a---GA~~Vd~T 310 (620)
++ +.|.+|.|+-- +..+.+.+..+.. ....|+.+
T Consensus 216 -vg----vclDtH~~~~g~~~~~~~~~~~~~~~~~~~~~hiHls 254 (301)
T 2j6v_A 216 -VP----VVVDTLHHALNPGRLPLEEALRLAFPTWRGRPKVHLA 254 (301)
T ss_dssp -CC----EEEEHHHHHHSCTTCCHHHHHHHHGGGCSSCCEEEEC
T ss_pred -CE----EEEeHHHHhcCCCCCChHHHHHHHHHHHhhCCEEEEC
Confidence 53 78888766543 3445666655543 22556554
No 303
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=73.99 E-value=30 Score=34.81 Aligned_cols=95 Identities=11% Similarity=-0.038 Sum_probs=44.5
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
++.+...|++.+-+..++.+.+ ..|.+|-.+.++.+++.+. | |..+. +..+.+...+.++.+.++||
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~--g---vi~Gv---g~~~t~~ai~la~~A~~~Ga 91 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGP-----ALSLQEKMELTDAATSAAR--R---VIVQV---ASLNADEAIALAKYAESRGA 91 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHHHHCS--S---EEEEC---CCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C---EEEee---CCCCHHHHHHHHHHHHhcCC
Confidence 3444445666655555555533 2455555444444443322 1 22222 23344555566666666666
Q ss_pred cEEeecCC-ccc-cCHHHHHHHHHHHHHhC
Q 007056 246 TTLNIPDT-VGI-TMPTEFGKLIADIKANT 273 (620)
Q Consensus 246 ~~I~L~DT-vG~-~~P~~v~~li~~l~~~~ 273 (620)
|.+.+.=- .-- .+++++.+.++.+.+..
T Consensus 92 davlv~~P~y~~~~s~~~l~~~f~~va~a~ 121 (286)
T 2r91_A 92 EAVASLPPYYFPRLSERQIAKYFRDLCSAV 121 (286)
T ss_dssp SEEEECCSCSSTTCCHHHHHHHHHHHHHHC
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 65433211 111 24555555555555554
No 304
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=73.89 E-value=13 Score=37.82 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=74.5
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe-ec-CCccc-cCHHHHHHHHHHHHH--hCCCCCc
Q 007056 204 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN-IP-DTVGI-TMPTEFGKLIADIKA--NTPGIEN 278 (620)
Q Consensus 204 ~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~-L~-DTvG~-~~P~~v~~li~~l~~--~~~~~~~ 278 (620)
.++++.|++.|+-.-.|+. .+.+.+..+++++.+.+...|. +. .+..+ +-+..+..++..+.+ .. +
T Consensus 10 ~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~----~ 80 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQFNM-----NNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI----T 80 (288)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHCCcEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC----C
Confidence 5778899999886346776 5789999999999999876543 33 34444 344557788877776 44 4
Q ss_pred eeEEEecCCCcchHHHHHHHHHHhcCcE--EeeccccccC
Q 007056 279 VVISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGE 316 (620)
Q Consensus 279 v~i~~H~HND~GlAvANslaAv~aGA~~--Vd~Ti~GlGE 316 (620)
+|+.+|. |-|....-...|+++|.+- +|+|-..+-|
T Consensus 81 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~ee 118 (288)
T 3q94_A 81 VPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEE 118 (288)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHH
Confidence 7788765 5566677889999999986 6998876644
No 305
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=73.76 E-value=25 Score=36.08 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHhHcCCC--EEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHh
Q 007056 94 TLTSKEKLDIARQLAKLGVD--IIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVK 170 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd--~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~ 170 (620)
.++.++-+++++.|.+.|++ .||=-+| +.|++..+++.+... +| |++=.+ ....+++..++.
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE~P~~---~~~~~~~~~l~~~~~---------ip-ia~dE~~~~~~~~~~~i~~-- 256 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYEQPVR---REDIEGLKFVRFHSP---------FP-VAADESARTKFDVMRLVKE-- 256 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEECCSC---TTCHHHHHHHHHHSS---------SC-EEESTTCCSHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeeeCCCC---cccHHHHHHHHHhCC---------CC-EEEeCCcCCHHHHHHHHHh--
Confidence 46899999999999999999 9996544 467888888877532 13 333222 245566655543
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
...+.|.+ +..+ --+..+.++++.|+++|+. +..+.
T Consensus 257 -~~~d~v~i-------------k~~~-GGit~~~~i~~~A~~~g~~-~~~~~ 292 (345)
T 2zad_A 257 -EAVDYVNI-------------KLMK-SGISDALAIVEIAESSGLK-LMIGC 292 (345)
T ss_dssp -TCCSEEEE-------------CHHH-HHHHHHHHHHHHHHTTTCE-EEECC
T ss_pred -CCCCEEEE-------------eccc-ccHHHHHHHHHHHHHcCCe-EEEec
Confidence 34566554 2234 4577788999999999985 66665
No 306
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=73.75 E-value=9.1 Score=39.48 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=49.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--CccccCH----HHHHHHHH---HHHHhCCCCCceeEEEecCCCcchHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--TVGITMP----TEFGKLIA---DIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~D--TvG~~~P----~~v~~li~---~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
|++++ +++.+.+.++..++.||+.|-+.= |--.+.| +|+.+++. .+++.. +++|++=+=+ .
T Consensus 25 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~----~vpiSIDT~~-----~ 95 (314)
T 2vef_A 25 DGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES----DVLISIDTWK-----S 95 (314)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC----CCEEEEECSC-----H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC----CceEEEeCCC-----H
Confidence 66665 689999999999999999987652 2111111 56665554 466654 3788885443 3
Q ss_pred HHHHHHHHhcCcEEeecc
Q 007056 294 ANTIAGACAGARQVEVTI 311 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti 311 (620)
.-+.+|+++||+.|+---
T Consensus 96 ~Va~aAl~aGa~iINDVs 113 (314)
T 2vef_A 96 QVAEAALAAGADLVNDIT 113 (314)
T ss_dssp HHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 456789999999996433
No 307
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=73.56 E-value=47 Score=32.32 Aligned_cols=202 Identities=9% Similarity=-0.032 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
.|-.+-...+-+.+.+.|++.+-.......++ +.+.++.+...- +. .|.... .........++.+...
T Consensus 17 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~---vd-------giIi~~-~~~~~~~~~~~~~~~~ 85 (305)
T 3g1w_A 17 DYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKN---PA-------GIAISA-IDPVELTDTINKAVDA 85 (305)
T ss_dssp THHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHC---CS-------EEEECC-SSTTTTHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhC---CC-------EEEEcC-CCHHHHHHHHHHHHHC
Confidence 45566677788888899998776443333332 345666655531 11 122111 2223334445555667
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
+++.|.+-....+.........+ ..+....+++++.+. |...+.|-.........+.+.-+.+++.+.|.+.-..
T Consensus 86 ~iPvV~~~~~~~~~~~~~~V~~d---~~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 162 (305)
T 3g1w_A 86 GIPIVLFDSGAPDSHAHSFLGTN---NYNAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAEFPAIEVI 162 (305)
T ss_dssp TCCEEEESSCCTTSCCSCEEECC---HHHHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCcEEEECCCCCCCceeEEECcC---HHHHHHHHHHHHHHHhCCCcEEEEEeCCCcccHHHHHHHHHHHHHhhCCCCEEE
Confidence 88887654322210000112233 234566778888888 8766655221122233355555666777777542111
Q ss_pred cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 251 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 251 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
.--.|...+....+.+..+.+..|+ + =.+=|.||.. |+.-..+.-++|.+ =|.+|.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~---~-~ai~~~~d~~-a~g~~~al~~~g~~-~di~vig~d 221 (305)
T 3g1w_A 163 AVEDGRGDSLHSRRVAHQLLEDYPN---L-AGIFATEANG-GVGVGDAVRLESRA-GEIQIISFD 221 (305)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHCTT---E-EEEEESSHHH-HHHHHHHHHHTTCT-TTSEEEEES
T ss_pred EEecCCCCHHHHHHHHHHHHHhCCC---c-eEEEECCCcc-hhhHHHHHHhcCCC-CCeEEEEeC
Confidence 1113446788888888877766654 2 2455777643 33333444567876 567788765
No 308
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=73.54 E-value=16 Score=36.63 Aligned_cols=127 Identities=8% Similarity=0.025 Sum_probs=71.4
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCEEEEcCCC-CC---C----CCH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPED-AG---R----SDR 230 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~-l~~~~~~v~~a~~~G~~~V~f~~ed-~~---r----~d~ 230 (620)
.+++..++.++.+|.+.|.++.... +.....+..++.. -+.+.+..+.+++.|+..+.+.... .. . ...
T Consensus 36 ~~l~~~l~~aa~~G~~~VEl~~~~~--~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~ 113 (305)
T 3obe_A 36 QDMPNGLNRLAKAGYTDLEIFGYRE--DTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFD 113 (305)
T ss_dssp TTHHHHHHHHHHHTCCEEEECCBCT--TTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEeccccc--ccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHH
Confidence 3778888888888999999875310 0000011211100 0023455567788998633343211 11 1 114
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCC--CCCceeEEEecCCC
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQND 288 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND 288 (620)
+++.+.++.+.++|+..|.++-.-....+..+..+++.+++-.+ ...++.|.+|.|+.
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 67888888899999999998732222456666666655544211 11148899999984
No 309
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=73.40 E-value=18 Score=36.90 Aligned_cols=206 Identities=16% Similarity=0.120 Sum_probs=115.7
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHH
Q 007056 104 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 165 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 165 (620)
++.++++|++.|=+|. |...+ +....++.|++.... |.++- |+. ....+.+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~---------PviaD~d~Gyg~-~~~~~~~~ 99 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSL---------PLLVDADIGFGS-SAFNVART 99 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCS---------CEEEECTTCSSS-SHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCC---------CEEecCCcccCC-CHHHHHHH
Confidence 6778889999998863 22111 124566666664321 33333 221 34444444
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHH
Q 007056 166 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVI 241 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~-~r~d~e~l~~~~~~~~ 241 (620)
...+..+|+..|+|-...++- |+.-+-=.+.++..++++.+++....-++. |.--. |+ .....+.+++-+++..
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~-i~aRt-da~~~~gl~~ai~ra~ay~ 177 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFV-IMART-DALAVEGLDAAIERAQAYV 177 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSE-EEEEE-CCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcE-EEEec-HHhhhcCHHHHHHHHHHHH
Confidence 455556799999998776421 111000035667777766666554432331 22111 11 0122477888899999
Q ss_pred HcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcc
Q 007056 242 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 321 (620)
Q Consensus 242 ~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa 321 (620)
++|||.|.+. |.-.++++.++.+.+. .| +..-+-..+... .-+.-.--+.|+++|-....+ =|+-+.
T Consensus 178 eAGAd~i~~e---~~~~~~~~~~i~~~~~--iP----~~~N~~~~g~~p--~~~~~eL~~~G~~~v~~~~~~--~~aa~~ 244 (295)
T 1xg4_A 178 EAGAEMLFPE---AITELAMYRQFADAVQ--VP----ILANITEFGATP--LFTTDELRSAHVAMALYPLSA--FRAMNR 244 (295)
T ss_dssp HTTCSEEEET---TCCSHHHHHHHHHHHC--SC----BEEECCSSSSSC--CCCHHHHHHTTCSEEEESSHH--HHHHHH
T ss_pred HcCCCEEEEe---CCCCHHHHHHHHHHcC--CC----EEEEecccCCCC--CCCHHHHHHcCCCEEEEChHH--HHHHHH
Confidence 9999999986 3345677777666653 33 111111111111 112345557799998655544 378888
Q ss_pred cHHHHHHHHHhcc
Q 007056 322 SLEEVVMAFKCRG 334 (620)
Q Consensus 322 ~lEevv~~L~~~~ 334 (620)
++++++..|...|
T Consensus 245 a~~~~~~~i~~~g 257 (295)
T 1xg4_A 245 AAEHVYNVLRQEG 257 (295)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 8888888888765
No 310
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=73.21 E-value=82 Score=32.96 Aligned_cols=165 Identities=16% Similarity=0.060 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccce-EEeecccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPV-ICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~-i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.++++-.+-++.+.+.|++.+-+=.......|.+.++.+.+.++..+ ... +=+..+...++..+..+.+...+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~~~------~l~~vDan~~~~~~~A~~~~~~l~~~~ 214 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRV------RIKSYDFSHLLNWKDAHRAIKRLTKYD 214 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHGGGC------EEEEEECTTCSCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHcCCCC------cEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 36777788888888999999987432222457788888888765321 112 22223334555555566677777
Q ss_pred C--CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 174 R--PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 174 ~--~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
+ ..|.=.++..+ ++ .+.+..+..++. | |.+-++++.+.+++ +.|+-.+..+
T Consensus 215 i~~~~iEqP~~~~d--------------~~---~~~~l~~~~~iP-I-----dE~~~~~~~~~~~~----~~~~~d~v~~ 267 (391)
T 3gd6_A 215 LGLEMIESPAPRND--------------FD---GLYQLRLKTDYP-I-----SEHVWSFKQQQEMI----KKDAIDIFNI 267 (391)
T ss_dssp SSCCEEECCSCTTC--------------HH---HHHHHHHHCSSC-E-----EEECCCHHHHHHHH----HHTCCSEEEE
T ss_pred CCcceecCCCChhh--------------HH---HHHHHHHHcCCC-c-----CCCCCCHHHHHHHH----HcCCCCEEEE
Confidence 6 55543222111 11 222333344554 4 44556665554443 4554334445
Q ss_pred CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 252 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 252 DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
|..=+.-+.+..++.....+. ++++.+||-...+.+++-++
T Consensus 268 k~~~~GGit~~~~ia~~A~~~-----gi~~~~~~~~es~i~~aa~~ 308 (391)
T 3gd6_A 268 SPVFIGGLTSAKKAAYAAEVA-----SKDVVLGTTQELSVGTAAMA 308 (391)
T ss_dssp CHHHHTSHHHHHHHHHHHHHT-----TCEEEECCCCCCHHHHHHHH
T ss_pred CchhcCCHHHHHHHHHHHHHc-----CCEEEecCCCccHHHHHHHH
Confidence 555555566666776666654 36677776656666665543
No 311
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=73.17 E-value=12 Score=38.37 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=81.5
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEE-eec-CCccccCHHHHHHHHHHHHHhCCCCCcee
Q 007056 203 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP-DTVGITMPTEFGKLIADIKANTPGIENVV 280 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I-~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~ 280 (620)
.+++++.|++.|+-.-.|+. .+.+.+..+++++.+.+...| .+. .+..++-..-+..++..+.+... ++|
T Consensus 5 ~~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~---~VP 76 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGAFNF-----VNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYP---HIP 76 (307)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-----SSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHST---TSC
T ss_pred HHHHHHHHHHcCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcC---CCc
Confidence 45778899999886346776 577999999999999987654 333 33445555667778877776633 377
Q ss_pred EEEecCCCcchHHHHHHHHHHhcCcE--EeeccccccCCcCcc-cHHHHHHHHHhcc
Q 007056 281 ISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGERAGNA-SLEEVVMAFKCRG 334 (620)
Q Consensus 281 i~~H~HND~GlAvANslaAv~aGA~~--Vd~Ti~GlGERaGNa-~lEevv~~L~~~~ 334 (620)
+.+|. |-|.-..-...|+++|.+- +|+|-..+-| |. -+-+++...+..|
T Consensus 77 ValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~ee---Ni~~Tk~vv~~ah~~g 128 (307)
T 3n9r_A 77 VALHL--DHGTTFESCEKAVKAGFTSVMIDASHHAFEE---NLELTSKVVKMAHNAG 128 (307)
T ss_dssp EEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH---HHHHHHHHHHHHHHTT
T ss_pred EEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCCHHH---HHHHHHHHHHHHHHcC
Confidence 88765 4555578889999999976 6999887644 32 2334444444443
No 312
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=72.99 E-value=20 Score=37.54 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||=-+| +.|++..+++++..+- |...+=.-....+++..++.
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 266 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFEQPTP---ADDLETLREITRRTNV---------SVMADESVWTPAEALAVVKA--- 266 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEESCSC---TTCHHHHHHHHHHHCC---------EEEESTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHhhCCC---------CEEecCccCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 239 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~ 239 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +..+....+.........++.+
T Consensus 267 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es~i~~aa~~hlaaa 320 (383)
T 3i4k_A 267 QAADVIAL-------------KTTKHGGLLESKKIAAIAEAGGLA-CHGATSLEGPIGTAASLQFAAS 320 (383)
T ss_dssp TCCSEEEE-------------CTTTTTSHHHHHHHHHHHHHTTCE-EEECCSCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEE-------------cccccCCHHHHHHHHHHHHHcCCe-EEeCCCCccHHHHHHHHHHHHc
No 313
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=72.87 E-value=8.4 Score=39.39 Aligned_cols=81 Identities=28% Similarity=0.312 Sum_probs=52.4
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--Cc-c---ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--TV-G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~D--Tv-G---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
|++++ +++.+.+.++...+.||+.|-+.= |- | +...+|+.+++..++..... +++|++=+=+ ..-+
T Consensus 38 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT~~-----~~Va 110 (294)
T 2y5s_A 38 DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYK-----PAVM 110 (294)
T ss_dssp ------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEECCC-----HHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEECCC-----HHHH
Confidence 56654 778999999999999999887652 22 2 33467777777666653221 4778884433 3445
Q ss_pred HHHHHhcCcEEeecc
Q 007056 297 IAGACAGARQVEVTI 311 (620)
Q Consensus 297 laAv~aGA~~Vd~Ti 311 (620)
.+|+++||+.|+---
T Consensus 111 ~aAl~aGa~iINdVs 125 (294)
T 2y5s_A 111 RAALAAGADLINDIW 125 (294)
T ss_dssp HHHHHHTCSEEEETT
T ss_pred HHHHHcCCCEEEECC
Confidence 788889999996543
No 314
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=72.83 E-value=71 Score=33.26 Aligned_cols=190 Identities=11% Similarity=0.026 Sum_probs=99.8
Q ss_pred HHHHHHHhHcCCCEEEEec--CC--C-C--------------------hhHHHHHHHHHHHhcccccccCCccceEEeec
Q 007056 101 LDIARQLAKLGVDIIEAGF--PA--A-S--------------------KEDFEAVRTIAKEVGNAVDAESGYVPVICGLS 155 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGf--P~--~-s--------------------~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~ 155 (620)
.+.++.|.++|+-.||+|. |. . + +.-..+++++.+. ... . . .|.+.-+.
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~-~~~-~---~-~pvivsI~ 134 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQ-HDY-G---K-KPLFLSMS 134 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHT-CCT-T---T-CCEEEEEC
T ss_pred HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHH-hhc-C---C-CcEEEEec
Confidence 4557888999999999984 11 0 1 1112344555432 111 1 1 23444432
Q ss_pred ccchhhHHHHHHHHh---cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-EEEEcCCCCCCCCH
Q 007056 156 RCNERDIKTAWEAVK---YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDR 230 (620)
Q Consensus 156 r~~~~dI~~a~eal~---~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~-~V~f~~ed~~r~d~ 230 (620)
=.+.+|...+++.+. ..+.+.|.+-+++-...-...+..+++ .+.+.++.+++. .+. .|-..| + .+.
T Consensus 135 G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e----~~~~il~av~~~~~~PV~vKi~p-~---~d~ 206 (354)
T 4ef8_A 135 GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFD----AMRQCLTAVSEVYPHSFGVKMPP-Y---FDF 206 (354)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHH----HHHHHHHHHHHHCCSCEEEEECC-C---CSH
T ss_pred cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHH----HHHHHHHHHHHhhCCCeEEEecC-C---CCH
Confidence 235667666655554 346676666554321110111222333 334444444443 232 234466 2 356
Q ss_pred HHHHHHHHHHHHcC-CcEEeecCCcc---------------------ccC----HHHHHHHHHHHHHhCCCCCceeEEEe
Q 007056 231 KFLYEILGEVIKVG-ATTLNIPDTVG---------------------ITM----PTEFGKLIADIKANTPGIENVVISTH 284 (620)
Q Consensus 231 e~l~~~~~~~~~aG-a~~I~L~DTvG---------------------~~~----P~~v~~li~~l~~~~~~~~~v~i~~H 284 (620)
+.+.++++.+.++| ++.|.+-.|+| .+. +..-.++|..+++..++ ++|..=
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~---ipII~~ 283 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPG---KLIFGC 283 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTT---SEEEEE
T ss_pred HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCC---CCEEEE
Confidence 77788888888898 99888754442 111 12345678888877543 455432
Q ss_pred cCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 285 CQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 285 ~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
.==.. ...++.++.+||+.|...
T Consensus 284 GGI~s---~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 284 GGVYT---GEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp SCCCS---HHHHHHHHHHTEEEEEEC
T ss_pred CCcCC---HHHHHHHHHcCCCEEEEh
Confidence 22111 346677788899888643
No 315
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=72.76 E-value=14 Score=38.96 Aligned_cols=134 Identities=9% Similarity=0.004 Sum_probs=77.2
Q ss_pred HHHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-EEEEcCCCC-----CC
Q 007056 166 WEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GR 227 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~-~-~V~f~~ed~-----~r 227 (620)
.+..+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.|+.+|+. |. . .|.+++.+. ..
T Consensus 173 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~ 252 (376)
T 1icp_A 173 ARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDT 252 (376)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCS
T ss_pred HHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCC
Confidence 334456899999887653 121 122334556777777777777777764 31 1 356777532 23
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCc-cccCHH-HHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-C
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTV-GITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 304 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTv-G~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 304 (620)
.+.+...++++.+.++|++.|.+..-. ....|. ...+.++.+++.++ ++|..=.- . -...+..+++.| |
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~----iPvi~~G~--i--~~~~a~~~l~~g~a 324 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK----GTFIVAGG--Y--DREDGNRALIEDRA 324 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC----SCEEEESS--C--CHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC----CCEEEeCC--C--CHHHHHHHHHCCCC
Confidence 456778899999999999999885311 001121 11235566777764 33432221 2 135666777777 6
Q ss_pred cEE
Q 007056 305 RQV 307 (620)
Q Consensus 305 ~~V 307 (620)
|.|
T Consensus 325 D~V 327 (376)
T 1icp_A 325 DLV 327 (376)
T ss_dssp SEE
T ss_pred cEE
Confidence 665
No 316
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=72.73 E-value=15 Score=38.36 Aligned_cols=131 Identities=11% Similarity=0.048 Sum_probs=82.5
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---EEEEcCCCCCC---CCHH
Q 007056 169 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDAGR---SDRK 231 (620)
Q Consensus 169 l~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~---~V~f~~ed~~r---~d~e 231 (620)
.+.+|.+.|.+-.+- |+. ++...+|-+.++-.+.+.+.|+.+|+. |-+ .|.+++.|... .+.+
T Consensus 167 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~ 246 (363)
T 3l5l_A 167 ARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE 246 (363)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH
T ss_pred HHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH
Confidence 345799998887653 221 223345667887788888888888875 322 25667753221 4567
Q ss_pred HHHHHHHHHHHcCCcEEeecCCc--cc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHHHhc-
Q 007056 232 FLYEILGEVIKVGATTLNIPDTV--GI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 303 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTv--G~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aG- 303 (620)
...++++.+.++|++.|.+.... +. ..|....++++.+++.+. ++|..= -|. -...+..+++.|
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~----GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK----LPVTSA----WGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CCEEEC----SSTTSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC----CcEEEe----CCCCCHHHHHHHHHCCC
Confidence 88899999999999999887521 11 012223456777777653 344321 122 256777889998
Q ss_pred CcEE
Q 007056 304 ARQV 307 (620)
Q Consensus 304 A~~V 307 (620)
|+.|
T Consensus 319 aD~V 322 (363)
T 3l5l_A 319 LDLV 322 (363)
T ss_dssp CSEE
T ss_pred ccEE
Confidence 8866
No 317
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=72.70 E-value=16 Score=38.03 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 172 (620)
.++.++-+++++.|.+.|++.||-.+| +.|++..+++++... +| |++=.+ ....+++..++. .
T Consensus 201 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iP-I~~dE~~~~~~~~~~~i~~---~ 264 (371)
T 2ovl_A 201 KWTVDGAIRAARALAPFDLHWIEEPTI---PDDLVGNARIVRESG---------HT-IAGGENLHTLYDFHNAVRA---G 264 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHHC---------SC-EEECTTCCSHHHHHHHHHH---T
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhhCC---------CC-EEeCCCCCCHHHHHHHHHc---C
Confidence 468999999999999999999997554 467788888877542 13 222222 245666655553 3
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
.++.|.+ .. .+---+..+.++++.|+++|+. +..++
T Consensus 265 ~~d~v~i--k~-----------~~~GGi~~~~~i~~~A~~~gi~-~~~h~ 300 (371)
T 2ovl_A 265 SLTLPEP--DV-----------SNIGGYTTFRKVAALAEANNML-LTSHG 300 (371)
T ss_dssp CCSEECC--CT-----------TTTTSHHHHHHHHHHHHHTTCC-EEECS
T ss_pred CCCEEee--Cc-----------cccCCHHHHHHHHHHHHHcCCe-Ecccc
Confidence 4555543 11 1112255677889999999986 66654
No 318
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.64 E-value=19 Score=36.13 Aligned_cols=116 Identities=14% Similarity=0.059 Sum_probs=68.8
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC-----CCC--------
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-----AGR-------- 227 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed-----~~r-------- 227 (620)
+++..++.++.+|.+.|.++.... + .-...+ +.+..+.+++.|+..+.+.... ...
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~--~--~~~~~~-------~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~ 98 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGK--G--AIGGVP-------MMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKY 98 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEET--T--EETTEE-------HHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSC
T ss_pred CHHHHHHHHHHcCCCEEEeccccC--c--ccCCCC-------HHHHHHHHHHcCCeEEEEecccccccccCccccccccc
Confidence 788888888899999999875210 0 001122 2344566778998633332211 000
Q ss_pred ------CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCC--CCCcee--EEEecCC
Q 007056 228 ------SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVV--ISTHCQN 287 (620)
Q Consensus 228 ------~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~--i~~H~HN 287 (620)
...+++.+.++.+.++|+..|.++-.-....+.....+++.+++..+ ...++. |.+|.|+
T Consensus 99 ~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 99 SKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred chhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 11467788888899999999988622112356666655555543211 011488 9999997
No 319
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=72.62 E-value=97 Score=32.39 Aligned_cols=198 Identities=16% Similarity=0.156 Sum_probs=113.1
Q ss_pred cccCCCCCC--CCCHHHHHHHHHHHhHcCCCEEEEecCCC-------C-hh-------------HHHHHHHHHHHhcccc
Q 007056 85 RDGEQSPGA--TLTSKEKLDIARQLAKLGVDIIEAGFPAA-------S-KE-------------DFEAVRTIAKEVGNAV 141 (620)
Q Consensus 85 RDG~Qs~g~--~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~-------s-~~-------------d~e~v~~i~~~~~~~~ 141 (620)
+.+.++-+. ..+.+.-..+++.-.+++-+.|=-.+|.. . +. -...++.+++...
T Consensus 25 ~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~--- 101 (358)
T 1dos_A 25 KENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG--- 101 (358)
T ss_dssp HHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred HHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCC---
Confidence 334444432 46789999999999999999764333321 0 00 0233444444321
Q ss_pred cccCCccceEEeecccch---hhHHHHHHHHh-------cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 007056 142 DAESGYVPVICGLSRCNE---RDIKTAWEAVK-------YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR 211 (620)
Q Consensus 142 ~~~~~l~~~i~~~~r~~~---~dI~~a~eal~-------~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~ 211 (620)
+|++.=+--+.. +.++.++++.. .+|...|.+ .. | ..+.||+++..++.+++|+
T Consensus 102 ------VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMi-Dg-S--------~~p~eENI~~Tkevv~~ah 165 (358)
T 1dos_A 102 ------VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMI-DL-S--------EESLQENIEICSKYLERMS 165 (358)
T ss_dssp ------CEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEE-CC-T--------TSCHHHHHHHHHHHHHHHH
T ss_pred ------CCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEee-cC-C--------CCCHHHHHHHHHHHHHHHH
Confidence 354444444433 55777776642 245777643 33 2 3578999999999999999
Q ss_pred HcCCCEEEE------cCCCC----------CCCCHHHHHHHHHHHHHcCCc-EEeecCCccc-----------cCHHHHH
Q 007056 212 SLGCDDVEF------SPEDA----------GRSDRKFLYEILGEVIKVGAT-TLNIPDTVGI-----------TMPTEFG 263 (620)
Q Consensus 212 ~~G~~~V~f------~~ed~----------~r~d~e~l~~~~~~~~~aGa~-~I~L~DTvG~-----------~~P~~v~ 263 (620)
..|+. |+- +-||. -.|+|+.+.+++++.. |+| ...|+=++|. +.|+...
T Consensus 166 ~~gvs-VEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~ 242 (358)
T 1dos_A 166 KIGMT-LEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILR 242 (358)
T ss_dssp HTTCE-EEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHH
T ss_pred HcCCE-EEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHH
Confidence 99974 543 22432 2489999988887643 444 2233333332 2345455
Q ss_pred HHHHHHHHhC--CCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 264 KLIADIKANT--PGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 264 ~li~~l~~~~--~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
++=+.+++.+ |.. ++||-+|+=. |.....-..|+..|+.-|
T Consensus 243 ~i~~~i~~~~g~~~~-~vpLVlHGgS--G~~~e~i~~ai~~GV~Ki 285 (358)
T 1dos_A 243 DSQEYVSKKHNLPHN-SLNFVFHGGS--GSTAQEIKDSVSYGVVKM 285 (358)
T ss_dssp HHHHHHHHHHTCCTT-CSCEEECSCT--TCCHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHhCCCCC-CCcEEEeCCC--CCCHHHHHHHHHCCCeEE
Confidence 5444444442 222 3789888733 555555555666665544
No 320
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=72.44 E-value=10 Score=39.52 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=49.7
Q ss_pred HHHHHHHHc--CCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 235 EILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 235 ~~~~~~~~a--Ga~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
+.++.+.+. |++.+.+-=+.| .|..+.+.|+++++.+|+ ++|.+.. .+....+..|+++||+.|.++..
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~---~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQ---HTIMAGN----VVTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTT---SEEEEEE----ECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCC---CeEEEEe----CCCHHHHHHHHHhCCCEEEECCC
Confidence 455566665 888776533334 466788899999999864 5666542 44567889999999999998744
No 321
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=72.32 E-value=47 Score=31.56 Aligned_cols=166 Identities=14% Similarity=0.075 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
+.++-+++++.+.. .++.+++|.+-.-..-.+.++.|.+..++. +.+.-+-+.. .-....+.+..+|++
T Consensus 14 ~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G~~~i~~l~~~~p~~--------~v~lD~kl~d--ip~t~~~~~~~~Gad 82 (216)
T 1q6o_A 14 TMDSAYETTRLIAE-EVDIIEVGTILCVGEGVRAVRDLKALYPHK--------IVLADAKIAD--AGKILSRMCFEANAD 82 (216)
T ss_dssp SHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHCTTS--------EEEEEEEECS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhcc-cCCEEEECHHHHHHhCHHHHHHHHHhCCCC--------eEEEEEEecc--cHHHHHHHHHhCCCC
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCCCCCHHHHHHHHHHHHHcCCcEEee----
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGATTLNI---- 250 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~~r~d~e~l~~~~~~~~~aGa~~I~L---- 250 (620)
.|.+-....+ +++.++++.+++.|.. +....- -.+ ..-.+.+.+.|.+.+.+
T Consensus 83 ~itvh~~~g~---------------~~l~~~~~~~~~~g~~-~~~~ll~~~t-------~~~~~~l~~~~~~~~vl~~a~ 139 (216)
T 1q6o_A 83 WVTVICCADI---------------NTAKGALDVAKEFNGD-VQIELTGYWT-------WEQAQQWRDAGIGQVVYHRSR 139 (216)
T ss_dssp EEEEETTSCH---------------HHHHHHHHHHHHTTCE-EEEEECSCCC-------HHHHHHHHHTTCCEEEEECCH
T ss_pred EEEEeccCCH---------------HHHHHHHHHHHHcCCC-ceeeeeeCCC-------hhhHHHHHhcCcHHHHHHHHH
Q ss_pred ----cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 251 ----PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 251 ----~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
+-..| .|+++..+-+.+...+| |.+ |-|....|.-.++++||+.|
T Consensus 140 ~~~~~G~~g--~~~~i~~lr~~~~~~~~------i~v----~GGI~~~~~~~~~~aGad~i 188 (216)
T 1q6o_A 140 DAQAAGVAW--GEADITAIKRLSDMGFK------VTV----TGGLALEDLPLFKGIPIHVF 188 (216)
T ss_dssp HHHHTTCCC--CHHHHHHHHHHHHTTCE------EEE----ESSCCGGGGGGGTTSCCSEE
T ss_pred HHHhcCCCC--CHHHHHHHHHhcCCCCc------EEE----ECCcChhhHHHHHHcCCCEE
No 322
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=72.19 E-value=15 Score=37.02 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=72.1
Q ss_pred ceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC--
Q 007056 149 PVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-- 225 (620)
Q Consensus 149 ~~i~~~~r-~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~-- 225 (620)
|.+.--+. +..+++..|++.+...|.+.+++.--.+.. .+.. +.++. ..+...++.| .|.|+|--+
T Consensus 120 PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~----~y~~---~~~dl--~~i~~lk~~~--pVivD~sH~~q 188 (267)
T 2nwr_A 120 AVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTF----GYNN---LVVDF--RSLPIMKQWA--KVIYDATHSVQ 188 (267)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEEC----SSSC---EECCT--THHHHHTTTS--EEEEETTGGGC
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc---cccCH--HHHHHHHHcC--CEEEcCCcccc
Confidence 44444444 467889999998888898877776543311 1110 00010 1233455566 488865433
Q ss_pred --------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCCccccCHHHHHHHHHHHHH
Q 007056 226 --------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEFGKLIADIKA 271 (620)
Q Consensus 226 --------~r~d~e~l~~~~~~~~~aGa~~I~----------L~DTvG~~~P~~v~~li~~l~~ 271 (620)
+.-..+++..++.++...||+-+. ++|-.=.+.|+++.++++.+++
T Consensus 189 ~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~l~~l~~~i~~ 252 (267)
T 2nwr_A 189 LPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAILE 252 (267)
T ss_dssp CTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCSSCTTTCEEGGGHHHHHHHHHH
T ss_pred cCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 233557888999999999997332 4688889999999999999875
No 323
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=72.14 E-value=9.5 Score=41.07 Aligned_cols=84 Identities=11% Similarity=0.122 Sum_probs=58.4
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHc
Q 007056 165 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKV 243 (620)
Q Consensus 165 a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~-r~d~e~l~~~~~~~~~a 243 (620)
-++.++.+|+.+|++-+=+.+-.....+++. ...+.+.++++.+++.|+..|..+...+- .-+.+.+.+.++.+.+.
T Consensus 155 ~l~~L~~~G~~rislGvQS~~~~~l~~i~R~--~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l 232 (457)
T 1olt_A 155 VLDHLRAEGFNRLSMGVQDFNKEVQRLVNRE--QDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232 (457)
T ss_dssp HHHHHHHTTCCEEEEEEECCCHHHHHHHTCC--CCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccCCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 3566778899999987655554555667664 23567778899999999852333222111 34578888999999999
Q ss_pred CCcEEee
Q 007056 244 GATTLNI 250 (620)
Q Consensus 244 Ga~~I~L 250 (620)
+++.|.+
T Consensus 233 ~~~~i~~ 239 (457)
T 1olt_A 233 NPDRLSV 239 (457)
T ss_dssp CCSEEEE
T ss_pred CcCEEEe
Confidence 9987765
No 324
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=72.08 E-value=38 Score=33.08 Aligned_cols=259 Identities=9% Similarity=-0.026 Sum_probs=123.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCC-CCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPA-ASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
.|-.+-...+-+.+.+.|++.+-..... ..+ .+.+.++.+... .+. + |.. .......++..++.+..
T Consensus 16 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~---~vd---g----iii-~~~~~~~~~~~~~~~~~ 84 (297)
T 3rot_A 16 PYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALAT---YPS---G----IAT-TIPSDTAFSKSLQRANK 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT---CCS---E----EEE-CCCCSSTTHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc---CCC---E----EEE-eCCCHHHHHHHHHHHHH
Confidence 3555666777788888999876554221 122 234556555542 111 1 211 11222323334444455
Q ss_pred CCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 172 AKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEF-SPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~a~~~G--~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
.|++.|.+-....+. ......+.+ ..+....+++++.+.| ...+.| ..........+.+.-+.+++.+.|.
T Consensus 85 ~giPvV~~~~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~ 161 (297)
T 3rot_A 85 LNIPVIAVDTRPKDKTKNPYLVFLGSD---NLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGI 161 (297)
T ss_dssp HTCCEEEESCCCSCTTTSCCSCEEECC---HHHHHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEcCCCccccccCcceEEccC---hHHHHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCC
Confidence 588887653322210 000011222 3445667888888888 665655 2222223334566667777778887
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCc-chHHHHHHHHHHhcCcE--EeeccccccCCcCccc
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL-GLSTANTIAGACAGARQ--VEVTINGIGERAGNAS 322 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~-GlAvANslaAv~aGA~~--Vd~Ti~GlGERaGNa~ 322 (620)
..+.+. +...+....+.+..+.+..|+.+ .+=|.||. .+++..++. ++|-+. =|.+|.|++ +.+
T Consensus 162 ~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~~A~g~~~al~--~~g~~vP~~dv~vig~D----~~~ 228 (297)
T 3rot_A 162 FFEELD---VGTDPNQVQSRVKSYFKIHPETN----IIFCLTSQALDPLGQMLL--HPDRYDFNYQPQVYSFD----KTP 228 (297)
T ss_dssp EEEEEE---CCSCHHHHHHHHHHHHHHCTTCC----EEEESSHHHHHHHHHHHH--SHHHHTCCCCCEEEEEC----CCH
T ss_pred eEEEee---cCCChHHHHHHHHHHHHhCCCCC----EEEEcCCcchHHHHHHHH--hcCCccCCCceEEEEeC----CCH
Confidence 765543 34568888888888766666432 44466654 355555544 345321 156777764 222
Q ss_pred HHHHHHHHHhccccccCccccCCChhhHHH-HHH-HHHHHhCCCCCCCCcccCccceeeecccccc
Q 007056 323 LEEVVMAFKCRGEHILGGLYTGINTRHIVM-ASK-MVEEYTGLHVQPHKAIVGANAFAHESGIHQD 386 (620)
Q Consensus 323 lEevv~~L~~~~~~~~~G~~t~idl~~L~~-~s~-~v~~~~g~~v~~~~pivG~naF~h~sGiH~d 386 (620)
. ....+.. +. .+ ..-..+...+-. ..+ ++..+.|..+++ .-.+|-..+.++|-=|-+
T Consensus 229 ~--~~~~i~~-~~-~l--ttv~~~~~~~g~~av~~l~~~i~g~~~~~-~i~~~~~~~~~~~~~~~~ 287 (297)
T 3rot_A 229 N--TVSLIHK-KL-VN--YVMDQQPFLMGYLSITQLVLMNRYQLNPV-NINTAMAENLYFQSHHHH 287 (297)
T ss_dssp H--HHHHHHT-TS-CC--EEECCCHHHHHHHHHHHHHHHHHHCCCCC-CEECCC------------
T ss_pred H--HHHHHHc-CC-ce--EEEecChHHHHHHHHHHHHHHHhCCCCCc-ccccCceEEecchhcccc
Confidence 2 2223332 11 00 012344444422 223 334455555544 445788888877765543
No 325
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=72.06 E-value=19 Score=35.08 Aligned_cols=86 Identities=15% Similarity=0.118 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEe
Q 007056 205 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH 284 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H 284 (620)
+..+..++.++-.| +-. .+++.+.++++++.+.|++.|-+... +| ...+.++.+++.+|+ +.++..
T Consensus 18 ~~~~~l~~~~ii~V-~r~-----~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~---~~igag 83 (225)
T 1mxs_A 18 RIDAICEKARILPV-ITI-----AREEDILPLADALAAGGIRTLEVTLR----SQ-HGLKAIQVLREQRPE---LCVGAG 83 (225)
T ss_dssp HHHHHHHHHSEEEE-ECC-----SCGGGHHHHHHHHHHTTCCEEEEESS----ST-HHHHHHHHHHHHCTT---SEEEEE
T ss_pred HHHHHHHHCCEEEE-EeC-----CCHHHHHHHHHHHHHCCCCEEEEecC----Cc-cHHHHHHHHHHhCcc---cEEeeC
Confidence 44556666765322 221 35567889999999999999998765 34 345678888988874 566654
Q ss_pred cCCCcchHHHHHHHHHHhcCcEEe
Q 007056 285 CQNDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 285 ~HND~GlAvANslaAv~aGA~~Vd 308 (620)
. . +=.-..-.|+++||+.|+
T Consensus 84 t---v-l~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 84 T---V-LDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp C---C-CSHHHHHHHHHHTCSSEE
T ss_pred e---E-eeHHHHHHHHHCCCCEEE
Confidence 3 2 223678899999999997
No 326
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=71.88 E-value=1.1e+02 Score=32.92 Aligned_cols=139 Identities=8% Similarity=-0.014 Sum_probs=80.3
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc--CC-CCCC-CCHHHHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE-DAGR-SDRKFLYE 235 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~--~e-d~~r-~d~e~l~~ 235 (620)
+|.-+.++.|..+|++.|.+..+.+=....+-++-+..|.++.+.+. . .+.....+. +. -+.+ .+.+-+..
T Consensus 30 ~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~---~--~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 30 DDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA---M--PNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp GGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH---C--SSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh---C--CCCeEEEEeccccccCcccccchhhHH
Confidence 33333345667789999998765431111122355555555544431 1 122222232 11 1222 23445567
Q ss_pred HHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecC----CCcchHHHHHHHHHHhcCcEEe
Q 007056 236 ILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQVE 308 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~Vd 308 (620)
.++.+.++|++.|.+.|..--. ..+.+.|+++++.-. .+...+|+= .|..-.+.-+.++.++||+.|-
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~---~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~ 176 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGA---HAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIA 176 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTC---EEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCC---EEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 8889999999999999865433 678888888887521 233444431 1445556667778899999763
No 327
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=71.87 E-value=21 Score=40.23 Aligned_cols=133 Identities=15% Similarity=0.125 Sum_probs=83.2
Q ss_pred HHHhcCCCCEEEEEecCC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---EEEEcCCCC--CCCCH
Q 007056 167 EAVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDR 230 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~S--------d~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~---~V~f~~ed~--~r~d~ 230 (620)
+..+.+|.+.|.+-.+.. +. ++...+|-+.++-.+.+.+.++.+|+. |-+ .|.+++.|. ...+.
T Consensus 148 ~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~ 227 (671)
T 1ps9_A 148 QLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTF 227 (671)
T ss_dssp HHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCH
T ss_pred HHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCH
Confidence 334568999988866531 21 122335566777777888888887764 322 246677543 24567
Q ss_pred HHHHHHHHHHHHcCCcEEeec----CC----ccccCH-HHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHHHHH
Q 007056 231 KFLYEILGEVIKVGATTLNIP----DT----VGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGA 300 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~----DT----vG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv 300 (620)
+...++++.+.++|++.|.+. +. .....| ....++++.+++.+. +||..= -|. -..++..++
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----iPvi~~----Ggi~~~~~a~~~l 299 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS----LPLVTT----NRINDPQVADDIL 299 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS----SCEEEC----SSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC----ceEEEe----CCCCCHHHHHHHH
Confidence 788899999999999999763 11 011111 123457777887763 455432 232 356788889
Q ss_pred Hhc-CcEE
Q 007056 301 CAG-ARQV 307 (620)
Q Consensus 301 ~aG-A~~V 307 (620)
+.| ||.|
T Consensus 300 ~~g~aD~V 307 (671)
T 1ps9_A 300 SRGDADMV 307 (671)
T ss_dssp HTTSCSEE
T ss_pred HcCCCCEE
Confidence 998 8876
No 328
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=71.69 E-value=15 Score=38.56 Aligned_cols=126 Identities=13% Similarity=0.063 Sum_probs=77.8
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--EEEEcCCCC----CC-CC
Q 007056 168 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA----GR-SD 229 (620)
Q Consensus 168 al~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~--~V~f~~ed~----~r-~d 229 (620)
..+.+|.+.|.|-.+. |+. ++...+|-|.+.-.+.+.+.|+.+|+. |.+ .|.+++.+. .. .+
T Consensus 169 ~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~ 248 (361)
T 3gka_A 169 NARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDP 248 (361)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCH
T ss_pred HHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCc
Confidence 3456899999987764 232 222345556776667777777776654 321 356787532 11 22
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcEE
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 307 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 307 (620)
.+...++++.+.++|++.|.+.... ..| ++++.+++.++ ++|-.=. |.-...+..+++.| ||.|
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~----iPvi~~G----git~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFG----GPFIVNE----NFTLDSAQAALDAGQADAV 313 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHC----SCEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcC----CCEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 5677899999999999999886532 122 46677777764 2332211 12356777888887 7765
No 329
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=71.43 E-value=66 Score=32.65 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc--------c-----ccCHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV--------G-----ITMPT 260 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv--------G-----~~~P~ 260 (620)
.|.+|++..+...++ ..... |..+.+.++ -+++.+.+.++.+.++||..|.|-|.+ | ....+
T Consensus 62 vt~~em~~~~~~I~~---~~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~ 136 (295)
T 1s2w_A 62 ASWTQVVEVLEFMSD---ASDVP-ILLDADTGY-GNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIE 136 (295)
T ss_dssp --CHHHHHHHHHHHH---TCSSC-EEEECCSSC-SSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHH
T ss_pred CCHHHHHHHHHHHHh---cCCCC-EEecCCCCC-CCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHH
Confidence 456666665554433 23344 788886664 467889999999999999999999997 3 23344
Q ss_pred HHHHHHHHHHHhCCCCCceeEEEecCCC-----cchHHHHHHHHHHhcCcEE
Q 007056 261 EFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQV 307 (620)
Q Consensus 261 ~v~~li~~l~~~~~~~~~v~i~~H~HND-----~GlAvANslaAv~aGA~~V 307 (620)
++.+.|+.+++.-.+. +..|-.-+-.. +--++.-+.+..+|||+.|
T Consensus 137 e~~~rI~Aa~~a~~~~-~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i 187 (295)
T 1s2w_A 137 EFALKIKACKDSQTDP-DFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAI 187 (295)
T ss_dssp HHHHHHHHHHHHCSST-TCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcccC-CcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEE
Confidence 5667777777653211 23333332221 1235556666667777665
No 330
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=71.35 E-value=62 Score=34.54 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=54.5
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccc--------------cCH---HHHHHHHHHHHHhCCCCCcee
Q 007056 218 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI--------------TMP---TEFGKLIADIKANTPGIENVV 280 (620)
Q Consensus 218 V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~--------------~~P---~~v~~li~~l~~~~~~~~~v~ 280 (620)
|-..| | .+.+.+.++++.+.++|+|.|.+.-|.+. .-| ...-++|..+++.+++ +++
T Consensus 274 VKi~p-d---~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~--~iP 347 (415)
T 3i65_A 274 VKLAP-D---LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK--QIP 347 (415)
T ss_dssp EEECS-C---CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT--CSC
T ss_pred EEecC-C---CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC--CCC
Confidence 34466 2 35567899999999999999999887642 111 2234678888887753 355
Q ss_pred EEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 281 ISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 281 i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
|-.=.==.. -..++.++.+||+.|...
T Consensus 348 IIg~GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIASGGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEECSSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEEECCCCC---HHHHHHHHHcCCCEEEEc
Confidence 542221111 246778888999888654
No 331
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=71.27 E-value=65 Score=31.07 Aligned_cols=81 Identities=14% Similarity=0.012 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEec-CCCcchHHHHHHHHHHhcCc
Q 007056 230 RKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACAGAR 305 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv~aGA~ 305 (620)
.+....-++.+.+.|++.|-+.=-.|. ..+..+.+.++.+++..++. -+.+.+.. --+..-...-+..+.++||+
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv-~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSA-VHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTS-EEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCc-eEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 333334457788899998875333344 25677888899999877532 13332221 11222244557788899999
Q ss_pred EEeecc
Q 007056 306 QVEVTI 311 (620)
Q Consensus 306 ~Vd~Ti 311 (620)
.|.++-
T Consensus 148 ~I~tst 153 (225)
T 1mzh_A 148 FIKTST 153 (225)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 996555
No 332
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.27 E-value=63 Score=35.19 Aligned_cols=131 Identities=15% Similarity=0.092 Sum_probs=74.8
Q ss_pred HHHHHHHHHhHcCCCEEEEecCC-CChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 177 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v 177 (620)
+-.+.++.|.+.|+|.|++.... .++.-.+.++.+.+..++ .+.+.+.. ...++.+.+.+ +|++.|
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~--------~~Vi~g~v-~t~e~a~~l~~----aGaD~I 297 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH--------LEIIGGNV-ATAEGARALIE----AGVSAV 297 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------CCEEEEEE-CSHHHHHHHHH----HTCSEE
T ss_pred chHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCC--------ceEEEccc-CcHHHHHHHHH----hCCCEE
Confidence 34677889999999999998642 233445778888775422 13444332 23455554444 489988
Q ss_pred EEE-ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 178 HTF-IATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 178 ~i~-~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
.+- .+.+...-+...+... ..+..+.++++.+++.++. |.- +++=.+++.+.+. ..+||+.+.+.
T Consensus 298 ~Vg~g~Gs~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iP-VIa---~GGI~~~~di~ka----la~GAd~V~iG 363 (496)
T 4fxs_A 298 KVGIGPGSICTTRIVTGVGV-PQITAIADAAGVANEYGIP-VIA---DGGIRFSGDISKA----IAAGASCVMVG 363 (496)
T ss_dssp EECSSCCTTBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCC-EEE---ESCCCSHHHHHHH----HHTTCSEEEES
T ss_pred EECCCCCcCcccccccCCCc-cHHHHHHHHHHHhccCCCe-EEE---eCCCCCHHHHHHH----HHcCCCeEEec
Confidence 763 2222211111222211 1345566777777777765 433 4555666655443 35799887765
No 333
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=71.00 E-value=84 Score=32.53 Aligned_cols=195 Identities=15% Similarity=0.160 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhh-HHHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 167 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 167 (620)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|+..+-+. ... +.+|.|++.+..+.++ |+.+-.
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~-------grvpViaGvg~~st~eai~la~~ 113 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVK-------AGIPVIVGTGAVNTASAVAHAVH 113 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHH-------TTCCEEEECCCSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhC-------CCCcEEEecCCCCHHHHHHHHHH
Confidence 478888899999999999998766 4 466666666443333 221 2357888888655443 444433
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHHHcCC
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~-~r~d~e~l~~~~~~~~~aGa 245 (620)
+ ..+|++.+-+..|-. .+ -+.+++++-..+..+. .-++.-+.|+..-. ...+++.+.+++ .+. .
T Consensus 114 A-~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~IA~a--a~~lPiilYn~P~tg~~l~~e~~~~L~---a~~-p 179 (344)
T 2hmc_A 114 A-QKVGAKGLMVIPRVL-------SRGSVIAAQKAHFKAILSA--APEIPAVIYNSPYYGFATRADLFFALR---AEH-K 179 (344)
T ss_dssp H-HHHTCSEEEECCCCS-------SSTTCHHHHHHHHHHHHHH--STTSCEEEEEBGGGTBCCCHHHHHHHH---HHC-T
T ss_pred H-HhcCCCEEEECCCcc-------CCCCCHHHHHHHHHHHHhh--CCCCcEEEEecCccCCCcCHHHHHHHH---hcC-C
Confidence 3 446999887766632 23 3666655544443321 23455456654422 235677776662 233 5
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHH-HhcCcEEeeccccccCCcCcccHH
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA-CAGARQVEVTINGIGERAGNASLE 324 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv-~aGA~~Vd~Ti~GlGERaGNa~lE 324 (620)
..+.+.||.| |..+.+ +..+++..++ +..+ +-+.+++ .+.++ ..|++.+ +.| .+|...+
T Consensus 180 nIvGiKdssg---p~d~~~-~~~~~~~~~~--~f~v-~~G~D~~------~l~~l~~~Ga~G~---is~----~anv~P~ 239 (344)
T 2hmc_A 180 NLVGFKEFGG---PADMRY-AAENITSRDD--EVTL-MIGVDTA------VVHGFVNCGATGA---ITG----IGNVLPK 239 (344)
T ss_dssp TEEEEEECSC---HHHHHH-HHHHTSCSSS--SCEE-EECSGGG------HHHHHHHSCCCEE---EES----GGGTSHH
T ss_pred CEEEEEcCCC---CCCHHH-HHHHHHHcCC--CEEE-EECcHHH------HHHHHHHcCCCEE---EeC----HHHhhHH
Confidence 7999999998 322322 2223333332 2222 2334432 34556 7887543 444 4677777
Q ss_pred HHHHHHH
Q 007056 325 EVVMAFK 331 (620)
Q Consensus 325 evv~~L~ 331 (620)
.++...+
T Consensus 240 ~~~~l~~ 246 (344)
T 2hmc_A 240 EVIHLCK 246 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665554
No 334
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=71.00 E-value=37 Score=35.30 Aligned_cols=98 Identities=17% Similarity=0.283 Sum_probs=64.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc-c-hhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N-ERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~-~~dI~~a~eal~~ 171 (620)
.++.++-+++++.|.+.|++.||-.+| +.|++..+++++... +| |++=.+. . ..+++..++.
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iP-Ia~dE~~~~~~~~~~~~i~~--- 273 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWIEEPMD---EQSLSSYKWLSDNLD---------IP-VVGPESAAGKHWHRAEWIKA--- 273 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEEECCSC---TTCHHHHHHHHHHCS---------SC-EEECSSCSSHHHHHHHHHHT---
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCccCcHHHHHHHHHc---
Confidence 468999999999999999999997554 467788888877532 13 3332222 3 4566655543
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
..++.|.+ .. .+---+..+.++++.|+++|+. +..+
T Consensus 274 ~~~d~v~i--k~-----------~~~GGit~~~~i~~~A~~~g~~-~~~~ 309 (382)
T 1rvk_A 274 GACDILRT--GV-----------NDVGGITPALKTMHLAEAFGME-CEVH 309 (382)
T ss_dssp TCCSEEEE--CH-----------HHHTSHHHHHHHHHHHHHTTCC-EEEC
T ss_pred CCCCEEee--Cc-----------hhcCCHHHHHHHHHHHHHcCCe-Eeec
Confidence 34566654 11 0111255677889999999986 6665
No 335
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=70.99 E-value=84 Score=31.00 Aligned_cols=200 Identities=13% Similarity=0.073 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
|-......+-+.+.+.|++.+-.+.....+. +.+.++.+... .+ ..|... ......+...++.++..|
T Consensus 17 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~---~v-------dgiii~-~~~~~~~~~~~~~a~~~g 85 (316)
T 1tjy_A 17 FFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQ---GY-------DAIIVS-AVSPDGLCPALKRAMQRG 85 (316)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHT---TC-------SEEEEC-CSSSSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHc---CC-------CEEEEe-CCCHHHHHHHHHHHHHCc
Confidence 4445566667778889986653321122222 33455555442 11 112111 112222233444445568
Q ss_pred CCEEEEEecCCHHHHHHHh-CCCHHHHHHHHHHHHHHHHH---cCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 007056 174 RPRIHTFIATSGIHMEHKL-RKTKQQVVEIARSMVKFARS---LGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTL 248 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l-~~t~ee~l~~~~~~v~~a~~---~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I 248 (620)
++.|.+--.........-. ..+..+ ....+++++.+ .|...+.| ..........++..-+.+++.+.+...-
T Consensus 86 ipvV~~d~~~~~~~~~~~v~~~D~~~---~g~~~~~~L~~~~~~g~~~i~~i~g~~~~~~~~~r~~g~~~~l~~~~~~~~ 162 (316)
T 1tjy_A 86 VKILTWDSDTKPECRSYYINQGTPKQ---LGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWE 162 (316)
T ss_dssp CEEEEESSCCCGGGCSEEEESCCHHH---HHHHHHHHHHHHHCSSSEEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTEE
T ss_pred CEEEEecCCCCCCCceEEEecCCHHH---HHHHHHHHHHHHcCCCCCEEEEEEcCCCChhHHHHHHHHHHHHHhhCCCcE
Confidence 8876553222111000012 344333 34445555555 45544544 3221111223444445555555543321
Q ss_pred eecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 249 NIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 249 ~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
.+....+-..+....+.+..+.+..|+.+ .+-|.|| ++|.+-..+.-++| + =|.+|.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~----aI~~~nD-~~A~g~~~al~~~G-~-~dv~VvG~D 222 (316)
T 1tjy_A 163 IVTTQFGYNDATKSLQTAEGIIKAYPDLD----AIIAPDA-NALPAAAQAAENLK-R-NNLAIVGFS 222 (316)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHCSSCC----EEEECST-THHHHHHHHHHHTT-C-CSCEEEEBC
T ss_pred EEEeccCCCCHHHHHHHHHHHHHhCCCCC----EEEECCC-ccHHHHHHHHHHcC-C-CCEEEEEeC
Confidence 11122345678877888877776666432 4557776 34444333344568 5 456787765
No 336
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=70.99 E-value=69 Score=32.59 Aligned_cols=195 Identities=16% Similarity=0.163 Sum_probs=112.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHH
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWE 167 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e 167 (620)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+....+-|+.+-.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-------grvpViaGvg~~t~~ai~la~~ 101 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-------GRALVVAGIGYATSTAIELGNA 101 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEEeCcCHHHHHHHHHH
Confidence 478888899999999999998866 3 355566665 34555555432 3357888887533333444433
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
...+|++.+-+..|-. .+.|.++.++-..+..+.. ++.-+-|+. ....+++.+.+++ +. ...
T Consensus 102 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~---~lPiilYn~--g~~l~~~~~~~La----~~-pnI 163 (316)
T 3e96_A 102 -AKAAGADAVMIHMPIH-------PYVTAGGVYAYFRDIIEAL---DFPSLVYFK--DPEISDRVLVDLA----PL-QNL 163 (316)
T ss_dssp -HHHHTCSEEEECCCCC-------SCCCHHHHHHHHHHHHHHH---TSCEEEEEC--CTTSCTHHHHHHT----TC-TTE
T ss_pred -HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEeC--CCCCCHHHHHHHH----cC-CCE
Confidence 3456999887765542 2447777666665555543 355456663 3345566555543 33 478
Q ss_pred EeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHH
Q 007056 248 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVV 327 (620)
Q Consensus 248 I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv 327 (620)
+.+.||.|- ..++.+++ +..++. +...-+-+.++.- ....+..|++ +.+.| .+|.--+.++
T Consensus 164 vgiKdssgd--~~~~~~~~----~~~~~~-~f~~v~~G~d~~~-----~~~~l~~G~~---G~is~----~an~~P~~~~ 224 (316)
T 3e96_A 164 VGVKYAIND--LPRFAKVV----RSIPEE-HQIAWICGTAEKW-----APFFWHAGAK---GFTSG----LVNLLPQKAV 224 (316)
T ss_dssp EEEEECCCC--HHHHHHHH----TTSCGG-GCCEEEETTCTTT-----HHHHHHHTCC---EEEES----GGGTCHHHHH
T ss_pred EEEEeCCCC--HHHHHHHH----HhcCCC-CceEEEeCChHHH-----HHHHHHCCCC---EEEec----hhhhhHHHHH
Confidence 999999873 34454444 333320 1110223443321 2234577875 34444 4577777766
Q ss_pred HHHHh
Q 007056 328 MAFKC 332 (620)
Q Consensus 328 ~~L~~ 332 (620)
...+.
T Consensus 225 ~l~~a 229 (316)
T 3e96_A 225 EMLEA 229 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
No 337
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=70.91 E-value=8.5 Score=38.89 Aligned_cols=117 Identities=17% Similarity=0.127 Sum_probs=74.2
Q ss_pred HHHHHHHHHHcCCCEEEEcC---CCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCce
Q 007056 203 ARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENV 279 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~---ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v 279 (620)
+++-++.++++|+. |.++- |.+... ..+.++++.+.+.|-+.|-|.|-.--+.+++-.++|+.+++.+. +
T Consensus 82 l~ekI~l~~~~gV~-v~~GGTlfE~~l~q--g~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~----V 154 (276)
T 1u83_A 82 LEEKISTLKEHDIT-FFFGGTLFEKYVSQ--KKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFL----V 154 (276)
T ss_dssp HHHHHHHHHHTTCE-EEECHHHHHHHHHT--TCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSE----E
T ss_pred HHHHHHHHHHcCCe-EeCCcHHHHHHHHc--CcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcE----E
Confidence 66788999999984 66633 211111 15567778888999999999999999999999999998877641 2
Q ss_pred eEEE-------ecCCCcchHHHHHHHHHHhcCcEE--ee---ccccccCCcCcccHHHH
Q 007056 280 VIST-------HCQNDLGLSTANTIAGACAGARQV--EV---TINGIGERAGNASLEEV 326 (620)
Q Consensus 280 ~i~~-------H~HND~GlAvANslaAv~aGA~~V--d~---Ti~GlGERaGNa~lEev 326 (620)
..++ ..=-+...-+-.....++|||+.| ++ .-.||=+..||.-...+
T Consensus 155 l~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v 213 (276)
T 1u83_A 155 LSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIV 213 (276)
T ss_dssp EEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC------------------CCH
T ss_pred eeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHH
Confidence 2222 233566788889999999999985 44 11377778888877655
No 338
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=70.91 E-value=11 Score=39.29 Aligned_cols=70 Identities=16% Similarity=0.229 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 229 DRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
.++.+.+.++...+.|++.|.+.-+-| ...|+++.++++..++. ++++.+|++.+. ...
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i~ 242 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR-----GTYVLAHAYTPA-----AIA 242 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT-----TCCEEEEECSHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc-----CCEEEEEeCChH-----HHH
Confidence 456677777777777887766654322 57889999999988874 367999999543 456
Q ss_pred HHHHhcCcEEe
Q 007056 298 AGACAGARQVE 308 (620)
Q Consensus 298 aAv~aGA~~Vd 308 (620)
.++++|++.|+
T Consensus 243 ~al~~G~~~i~ 253 (426)
T 2r8c_A 243 RAVRCGVRTIE 253 (426)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEe
Confidence 78889998874
No 339
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=70.87 E-value=79 Score=30.59 Aligned_cols=197 Identities=10% Similarity=0.041 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHHhHcCC-CEEEEecCCCCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGV-DIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gv-d~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
.|-..-...+-+.+.+.|+ +.+-.. ....+ .+.+.++.+... .+ ..|... .......+..++.++.
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~---~v-------dgiii~-~~~~~~~~~~~~~~~~ 82 (309)
T 2fvy_A 15 NFMSVVRKAIEQDAKAAPDVQLLMND-SQNDQSKQNDQIDVLLAK---GV-------KALAIN-LVDPAAAGTVIEKARG 82 (309)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEEEE-CTTCHHHHHHHHHHHHHT---TC-------SEEEEC-CSSGGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEec-CCCCHHHHHHHHHHHHHc---CC-------CEEEEe-CCCcchhHHHHHHHHH
Confidence 3445666677778888997 554332 22222 234455555442 11 112211 1222223344555666
Q ss_pred CCCCEEEEEecCCHHHH-----HHHhCCCHHHHHHHHHHHHHHHHH------------cCCCEEEE-cCCCCCCCCHHHH
Q 007056 172 AKRPRIHTFIATSGIHM-----EHKLRKTKQQVVEIARSMVKFARS------------LGCDDVEF-SPEDAGRSDRKFL 233 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~-----~~~l~~t~ee~l~~~~~~v~~a~~------------~G~~~V~f-~~ed~~r~d~e~l 233 (620)
.+++.|.+-....+... ......+.. +....+++++.+ +|...+.| +.........+.+
T Consensus 83 ~~iPvV~~~~~~~~~~~~~~~~~~~V~~d~~---~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i~~~~~~~~~~~R~ 159 (309)
T 2fvy_A 83 QNVPVVFFNKEPSRKALDSYDKAYYVGTDSK---ESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEART 159 (309)
T ss_dssp TTCCEEEESSCCCHHHHHTCTTEEEEECCHH---HHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECSTTCHHHHHHH
T ss_pred CCCcEEEecCCCCcccccccCccEEEecCHH---HHHHHHHHHHHHHHhhcccccccCCCceEEEEEEcCCCCccHHHHH
Confidence 78887755332222100 001233333 334455566655 66544444 3221222234556
Q ss_pred HHHHHHHHHcCCcE--EeecCCccccCHHHHHHHHHHHHHhCC--CCCceeEEEecCCCcchHHHHHHHHHHhcCcEE-e
Q 007056 234 YEILGEVIKVGATT--LNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQV-E 308 (620)
Q Consensus 234 ~~~~~~~~~aGa~~--I~L~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V-d 308 (620)
.-+.+++.+.|... ..+. .|-..+....+.++.+.+..| +. =.+-|.||. +|++-..++-++| - |
T Consensus 160 ~gf~~~l~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~----~ai~~~~d~-~a~g~~~al~~~g---~~d 229 (309)
T 2fvy_A 160 TYVIKELNDKGIKTEQLQLD--TAMWDTAQAKDKMDAWLSGPNANKI----EVVIANNDA-MAMGAVEALKAHN---KSS 229 (309)
T ss_dssp HHHHHHHHHTTCCEEEEEEE--ECTTCHHHHHHHHHHHHTSTTGGGC----CEEEESSHH-HHHHHHHHHHHTT---CTT
T ss_pred HHHHHHHHhcCCceEEEEEe--cCCCCHHHHHHHHHHHHHhCCCCCc----cEEEECCch-hHHHHHHHHHHcC---CCC
Confidence 66667777888642 1111 233567777777777766543 22 245577764 5555444445667 3 5
Q ss_pred ecccccc
Q 007056 309 VTINGIG 315 (620)
Q Consensus 309 ~Ti~GlG 315 (620)
.+|.|++
T Consensus 230 i~vig~d 236 (309)
T 2fvy_A 230 IPVFGVD 236 (309)
T ss_dssp SCEECSB
T ss_pred ceEEecC
Confidence 6788765
No 340
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=70.80 E-value=9.3 Score=38.47 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHH-cCCcEEee--c--------CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 229 DRKFLYEILGEVIK-VGATTLNI--P--------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 229 d~e~l~~~~~~~~~-aGa~~I~L--~--------DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
+++.+.+.++.+.+ +|+|.|.| . |+.| ..|..+.++++.+++.+. ++|.+..--+..-...-+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~----~pv~vk~~~~~~~~~~~a~ 183 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK----VPLYVKLSPNVTDIVPIAK 183 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCSHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC----CCEEEEECCChHHHHHHHH
Confidence 46667777777776 78875533 2 3333 368888999999998862 5566654422222223356
Q ss_pred HHHHhcCcEEeecc
Q 007056 298 AGACAGARQVEVTI 311 (620)
Q Consensus 298 aAv~aGA~~Vd~Ti 311 (620)
.+.++|++.|..+=
T Consensus 184 ~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 184 AVEAAGADGLTMIN 197 (311)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHHcCCCEEEEeC
Confidence 77889999998853
No 341
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=70.73 E-value=30 Score=33.84 Aligned_cols=114 Identities=7% Similarity=-0.046 Sum_probs=69.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CC--CCCCH------
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DA--GRSDR------ 230 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~--~r~d~------ 230 (620)
.+++..++.++..|.+.|.+..... + ..+.+..+.++++|+....+++. +. ...++
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~------------~---~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~ 102 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGL------------A---GRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKEC 102 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTC------------G---GGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCch------------H---HHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHH
Confidence 4677888888889999999876521 1 23445667778889863233331 11 12233
Q ss_pred -HHHHHHHHHHHHcCCcEEeecCCccc------cCHHHHHHHHHHHHHh---CCCCCceeEEEecCCCc
Q 007056 231 -KFLYEILGEVIKVGATTLNIPDTVGI------TMPTEFGKLIADIKAN---TPGIENVVISTHCQNDL 289 (620)
Q Consensus 231 -e~l~~~~~~~~~aGa~~I~L~DTvG~------~~P~~v~~li~~l~~~---~~~~~~v~i~~H~HND~ 289 (620)
+++.+.++.+.+.|+..|.+.-..|. ..+.....+++.+++- ... .++.|.+|.||.+
T Consensus 103 ~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~ 170 (287)
T 3kws_A 103 MDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQ-HGTSVIFEPLNRK 170 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHH-TTCCEEECCCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEecCcc
Confidence 57788888899999999887533222 2334444444443321 111 1478999999854
No 342
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=70.65 E-value=1.3e+02 Score=33.20 Aligned_cols=231 Identities=12% Similarity=0.072 Sum_probs=131.2
Q ss_pred CCHHHHHHH----HHHHhHcCCCEEEEe-cCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc------chhhHH
Q 007056 95 LTSKEKLDI----ARQLAKLGVDIIEAG-FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC------NERDIK 163 (620)
Q Consensus 95 fs~~~Kl~I----a~~L~~~Gvd~IEvG-fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~------~~~dI~ 163 (620)
++.++-.++ ++.|.+.|+|.|=+- +| +..+..++-..++..-. + .|.++.++-. .-..++
T Consensus 119 ~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~--~~~Ea~aa~~a~~~~~~------~-~Pv~vS~t~~~~g~~~~G~~~~ 189 (566)
T 1q7z_A 119 TLFEEFYENFRETVEIMVEEGVDGIIFETFS--DILELKAAVLAAREVSR------D-VFLIAHMTFDEKGRSLTGTDPA 189 (566)
T ss_dssp BCHHHHHHHHHHHHHHHHHTTCSEEEEEEEC--CHHHHHHHHHHHHHHCS------S-SCEEEEECCCTTSCCTTSCCHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeccC--CHHHHHHHHHHHHHhCC------C-CcEEEEEEEcCCCeeCCCCcHH
Confidence 566665544 456678999977554 44 34555444333332100 1 2455555421 123477
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEEEcCC-------C---CCCCCHHH
Q 007056 164 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPE-------D---AGRSDRKF 232 (620)
Q Consensus 164 ~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~f~~e-------d---~~r~d~e~ 232 (620)
.++..+...+.+.|.+-.++.+-|+. +.++.++.. .. .+...|- + .+..+|++
T Consensus 190 ~~~~~l~~~~~~avG~NC~~gp~~~~---------------~~l~~l~~~~~~-p~~vyPNaG~p~~~~~~~~~~~~p~~ 253 (566)
T 1q7z_A 190 NFAITFDELDIDALGINCSLGPEEIL---------------PIFQELSQYTDK-FLVVEPNAGKPIVENGKTVYPLKPHD 253 (566)
T ss_dssp HHHHHHHTSSCSEEEEESSSCHHHHH---------------HHHHHHHHTCCS-EEEEECCSSSCEEETTEEECCCCHHH
T ss_pred HHHHHhhccCCCEEEEeCCCCHHHHH---------------HHHHHHHhcCCC-EEEEEcCCCCCcccCCccccCCCHHH
Confidence 88888888888888877666664442 233333332 22 2333221 1 12346888
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCC----C-ce--------------eEEE--ec------
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI----E-NV--------------VIST--HC------ 285 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~----~-~v--------------~i~~--H~------ 285 (620)
+.+.++...+.|+..|.=| =..+|+.++.+-+.++..-|.. + .+ .++. ..
T Consensus 254 ~a~~~~~~~~~G~~iiGGC---CGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf 330 (566)
T 1q7z_A 254 FAVHIDSYYELGVNIFGGC---CGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKL 330 (566)
T ss_dssp HHTTHHHHHHTTCSEECCC---TTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHH
T ss_pred HHHHHHHHHHcCCcEEccc---cCCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhH
Confidence 9999999999998877533 1369999999988886543211 0 01 1121 11
Q ss_pred -----CCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHH
Q 007056 286 -----QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEE 359 (620)
Q Consensus 286 -----HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~ 359 (620)
|+|.--+++-+..-+++||+.||... |......-..++.++..+... .++.-.||..+-.-+..-++.
T Consensus 331 ~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgp-g~~~v~~~ee~~rvv~~i~~~-----~~vpisIDT~~~~v~eaal~~ 403 (566)
T 1q7z_A 331 WAEMQKGNEEIVIKEAKTQVEKGAEVLDVNF-GIESQIDVRYVEKIVQTLPYV-----SNVPLSLDIQNVDLTERALRA 403 (566)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHTTCSEEEEEC-SSGGGSCHHHHHHHHHHHHHH-----TCSCEEEECCCHHHHHHHHHH
T ss_pred HHHhhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCHHHHHHHHHHHHHhh-----CCceEEEeCCCHHHHHHHHHh
Confidence 34566788888999999999999983 333333444455556666432 133344555443333333433
No 343
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=70.58 E-value=53 Score=32.38 Aligned_cols=211 Identities=12% Similarity=0.058 Sum_probs=106.3
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC-----ChhHHHHHHHHHHHhcccccccCCcc
Q 007056 74 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKEDFEAVRTIAKEVGNAVDAESGYV 148 (620)
Q Consensus 74 ~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~-----s~~d~e~v~~i~~~~~~~~~~~~~l~ 148 (620)
+.++-|.-.++++ .++.++.+ +.+.++|++.||+.++.. .+.+.+.++++.+..+-. +
T Consensus 22 ~~klgi~~~~~~~-------~~~~~~~l---~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-------i 84 (296)
T 2g0w_A 22 KCPITISSYTLGT-------EVSFPKRV---KVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK-------V 84 (296)
T ss_dssp CCCEEECGGGGTT-------TSCHHHHH---HHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE-------E
T ss_pred CCCceeechhcCC-------CCCHHHHH---HHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc-------e
Confidence 4557777777775 25666554 455678999999975311 122345565555543221 1
Q ss_pred ceEEeecc---cc------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 007056 149 PVICGLSR---CN------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 219 (620)
Q Consensus 149 ~~i~~~~r---~~------~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~ 219 (620)
..+..+.. .. .+.++.+++.....|.+.|.+ .+.. ..+.+...+.+.+++++| .|+. +.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~-g~~~--------~~~~~~~~~~l~~l~~~a--~Gv~-l~ 152 (296)
T 2g0w_A 85 TEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINC-GLLE--------KIPEEQIIVALGELCDRA--EELI-IG 152 (296)
T ss_dssp EEEECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE-CCCS--------CCCHHHHHHHHHHHHHHH--TTSE-EE
T ss_pred EeehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEE-cCCC--------CCCHHHHHHHHHHHHHHh--cCCE-EE
Confidence 11221111 11 112344555555558887765 2211 124667778888888888 7764 54
Q ss_pred EcCC-CCCCCCHHHHHHHHHHHHHcCCcEEee-cCCcc----ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 220 FSPE-DAGRSDRKFLYEILGEVIKVGATTLNI-PDTVG----ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 220 f~~e-d~~r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG----~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
+-+. ...-.+++.+.++++.+ +...+.+ .||.= ...|.+ .+ +.+. +-...+|++|..+...
T Consensus 153 lE~~~~~~~~~~~~~~~l~~~v---~~~~vgl~~D~~H~~~~g~d~~~------~~-~~~~---~~i~~vHl~D~~~~~~ 219 (296)
T 2g0w_A 153 LEFMPYSGVADLQAAWRVAEAC---GRDNAQLICDTWHWARANQTAES------IK-NVPA---DRIVSIQLCDVHETPY 219 (296)
T ss_dssp EECCTTSSSCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHTTCCGGG------GT-TCCG---GGEEEEEECBCCSSCC
T ss_pred EEecCCCCCCCHHHHHHHHHHh---CCCCeEEEEehhHhhccCCCHHH------HH-hcCh---hhEEEEEecCCCCCCc
Confidence 4322 12234566666766654 3322322 25421 112221 11 1222 2356888888653210
Q ss_pred HHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 294 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
.- +.. ..+.++ .. .|+ |..+...++..|+..|+
T Consensus 220 ~~-~~~-~~~~~r---~~--pG~--G~id~~~i~~~L~~~gy 252 (296)
T 2g0w_A 220 KE-LRE-ESLHDR---LA--PGE--GYGDTVGFAKILKEHGV 252 (296)
T ss_dssp SS-HHH-HHHHBC---BC--TTS--SSSCHHHHHHHHHHHTC
T ss_pred hh-hhh-HHHhcC---CC--CCC--CCccHHHHHHHHHHcCC
Confidence 00 000 000011 12 344 88999999999998664
No 344
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=70.40 E-value=56 Score=34.59 Aligned_cols=133 Identities=14% Similarity=0.076 Sum_probs=80.1
Q ss_pred HHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--EEEEcCCCC-----CCC
Q 007056 167 EAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA-----GRS 228 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~--~V~f~~ed~-----~r~ 228 (620)
+..+.+|.+.|.|-.+- |+. ++...+|-+.++-.+.+.++|+.+|+. |-. .|.+++.+. ...
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 33456899999887653 232 223345667777777777777777764 311 356677532 223
Q ss_pred CHHHHHHHHHHHHHcC------CcEEeecCCc--c-ccC-------HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH
Q 007056 229 DRKFLYEILGEVIKVG------ATTLNIPDTV--G-ITM-------PTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 292 (620)
Q Consensus 229 d~e~l~~~~~~~~~aG------a~~I~L~DTv--G-~~~-------P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 292 (620)
+.+...++++.+.++| ++.|.+..-. + ... +..-.++++.+++.++ ++|..=. +. -
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~----iPvi~~G--~i--~ 329 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ----GTFICSG--GY--T 329 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS----SCEEEES--SC--C
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC----CCEEEeC--CC--C
Confidence 4577889999999999 9988884310 0 001 2123467778888774 3333221 12 2
Q ss_pred HHHHHHHHHhc-CcEE
Q 007056 293 TANTIAGACAG-ARQV 307 (620)
Q Consensus 293 vANslaAv~aG-A~~V 307 (620)
...+..+++.| ||.|
T Consensus 330 ~~~a~~~l~~g~aD~V 345 (402)
T 2hsa_B 330 RELGIEAVAQGDADLV 345 (402)
T ss_dssp HHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHCCCCcee
Confidence 45667777777 7766
No 345
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=70.25 E-value=29 Score=37.29 Aligned_cols=199 Identities=17% Similarity=0.106 Sum_probs=122.6
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCH----HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC----------
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSG----IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG---------- 226 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd----~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~---------- 226 (620)
.+.+.++.+..+|+..|||-..+.. -|+..+-=.+.+|.++++..+...++..|.+.+...=-|+-
T Consensus 168 ~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d 247 (439)
T 3i4e_A 168 NAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDID 247 (439)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccc
Confidence 3445556666779999999877642 13221112478999999988877777777652222111220
Q ss_pred -------------------CCCHHHHHHHHHHHHHcCCcEEee-cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecC
Q 007056 227 -------------------RSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 286 (620)
Q Consensus 227 -------------------r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H 286 (620)
+...+..++-+++..+ |||.|.+ + |.-.++++.++.+.++..+|. ..+.+-+-
T Consensus 248 ~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~---~~~~~eei~~f~~~v~~~~P~---~~l~~~~s 320 (439)
T 3i4e_A 248 DNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCET---GKPDLEYAKKFAEAIHKQFPG---KLLSYNCS 320 (439)
T ss_dssp TTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECC---SSCCHHHHHHHHHHHHHHSTT---CEEEEECC
T ss_pred cccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecC---CCCCHHHHHHHHHHhcccCCc---eEEeeCCC
Confidence 2346777777777777 9999976 3 457899999999999988874 23443322
Q ss_pred CCcc----hH---HHH-HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHH
Q 007056 287 NDLG----LS---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 358 (620)
Q Consensus 287 ND~G----lA---vAN-slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~ 358 (620)
-.+. +. +++ .-.--+.|+.++=.++.| =|+-|.++.+++..+...|. .. ... ..--++-.
T Consensus 321 Psfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~--~raa~~A~~~~a~~i~~~Gm------~a---yve-~Q~~e~~~ 388 (439)
T 3i4e_A 321 PSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAG--FHALNYSMFNLAHGYARTQM------SA---FVE-LQQAEFAA 388 (439)
T ss_dssp SSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHH--HHHHHHHHHHHHHHHHHHTH------HH---HHH-HHHHHHHH
T ss_pred CCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHH--HHHHHHHHHHHHHHHHHhCC------HH---HHH-HHHHhhhh
Confidence 2222 11 111 123345799999776665 47888999999888876431 11 111 11122224
Q ss_pred HHhCCCCCCCCcccCcccee
Q 007056 359 EYTGLHVQPHKAIVGANAFA 378 (620)
Q Consensus 359 ~~~g~~v~~~~pivG~naF~ 378 (620)
+..|+..-.|+-.+|.+-|-
T Consensus 389 ~~~g~~~~~hq~~~G~~y~d 408 (439)
T 3i4e_A 389 ADKGFTAVKHQREVGTGYFD 408 (439)
T ss_dssp TTTTCCTTSHHHHTTHHHHH
T ss_pred hhcCcceeecccccccchHH
Confidence 56777777788888876553
No 346
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=69.93 E-value=69 Score=32.47 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=86.6
Q ss_pred HHHHhHcCCCEEEEecCCCCh-----------------hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHH
Q 007056 104 ARQLAKLGVDIIEAGFPAASK-----------------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAW 166 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGfP~~s~-----------------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~ 166 (620)
.+.|.++|+.-+ .=||..+- ++.+.++...+. ++....|++ +.++.+...
T Consensus 114 Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~---------gL~Ti~~v~---~~eeA~amA 180 (286)
T 2p10_A 114 LRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL---------DLLTTPYVF---SPEDAVAMA 180 (286)
T ss_dssp HHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT---------TCEECCEEC---SHHHHHHHH
T ss_pred HHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC---------CCeEEEecC---CHHHHHHHH
Confidence 399999999999 88984321 122334333321 444445554 344444333
Q ss_pred HHHhcCCCCEEEEEecCCH-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCC
Q 007056 167 EAVKYAKRPRIHTFIATSG-IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 245 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd-~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa 245 (620)
+ +|.+.|.+-.+... -.+-..-..|.++..+.+.+.++.+++..-+ |.+-+--+.-++++.+..+++. -.|+
T Consensus 181 ~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpd-vivLc~gGpIstpeDv~~~l~~--t~G~ 253 (286)
T 2p10_A 181 K----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDD-IIILSHGGPIANPEDARFILDS--CQGC 253 (286)
T ss_dssp H----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSC-CEEEEESTTCCSHHHHHHHHHH--CTTC
T ss_pred H----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCC-cEEEecCCCCCCHHHHHHHHhc--CCCc
Confidence 3 48888777655211 1122233467888788888888888887644 3332211245777777665532 1278
Q ss_pred cEEeecCCccccCHHH-HHHHHHHHHH
Q 007056 246 TTLNIPDTVGITMPTE-FGKLIADIKA 271 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~-v~~li~~l~~ 271 (620)
+-+..+-++-.+.|++ +.++++.++.
T Consensus 254 ~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 254 HGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp CEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 8888888887777655 5667777765
No 347
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=69.81 E-value=1.1e+02 Score=31.73 Aligned_cols=167 Identities=11% Similarity=0.019 Sum_probs=94.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
-++++-.+-++.+.+.|++.+-+=.......|.+.++.+.+.++..+ ...+=+-.+...++..+.++.+...++
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~g~~~------~l~vDaN~~~~~~~A~~~~~~l~~~~i 212 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAAGDSI------TLRIDANQGWSVETAIETLTLLEPYNI 212 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCSSS------EEEEECTTCBCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHhCCCC------eEEEECCCCCChHHHHHHHHHHhhcCC
Confidence 36788788888888999998876332223567888998888765421 112222233344454444566666676
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 254 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv 254 (620)
..|.=.++..+ ++ .+.+..+..++. |.. |.+-+++..+.+ +.+.|+-.+..+|..
T Consensus 213 ~~iEqP~~~~~--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~----~~~~~~~d~v~~k~~ 267 (368)
T 3q45_A 213 QHCEEPVSRNL--------------YT---ALPKIRQACRIP-IMA---DESCCNSFDAER----LIQIQACDSFNLKLS 267 (368)
T ss_dssp SCEECCBCGGG--------------GG---GHHHHHHTCSSC-EEE---STTCCSHHHHHH----HHHTTCCSEEEECTT
T ss_pred CEEECCCChhH--------------HH---HHHHHHhhCCCC-EEE---cCCcCCHHHHHH----HHHcCCCCeEEechh
Confidence 66653332211 11 122222334553 433 444466655544 345554444455655
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 255 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 255 G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
=+.-..+..++.....+. ++++.+||....+++++-++
T Consensus 268 ~~GGit~~~~i~~~A~~~-----gi~~~~~~~~es~i~~aa~~ 305 (368)
T 3q45_A 268 KSAGITNALNIIRLAEQA-----HMPVQVGGFLESRLGFTAAA 305 (368)
T ss_dssp TTTSHHHHHHHHHHHHHT-----TCCEEECCSSCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHc-----CCcEEecCccccHHHHHHHH
Confidence 555566677777766654 36688888877777766443
No 348
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=69.75 E-value=15 Score=38.61 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..+.++.+.++|++.|.| ||... .|..+.+.|+++++.+|+ +++.... ..-..-+..++++||+.|.+
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~---v~Vi~G~----v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPH---LEIIGGN----VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTT---CEEEEEE----ECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCC---CceEeee----eCCHHHHHHHHHcCCCEEEE
Confidence 346678888999998776 44433 466788899999999875 5554421 22355678899999999987
No 349
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=69.71 E-value=86 Score=30.59 Aligned_cols=123 Identities=9% Similarity=0.058 Sum_probs=71.3
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc--CC---CCCCCC-----
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE---DAGRSD----- 229 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~--~e---d~~r~d----- 229 (620)
.+++..++.++.+|.+.|.+.......|.. .+..+. +.+.+..+.+++.|+..+.++ .. +....+
T Consensus 30 ~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~ 104 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSVDETDERLS-RLDWSR----EQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRA 104 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCSSHHHHG-GGGCCH----HHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEecCCcccccC-cccCCH----HHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHH
Confidence 467888888888999999998665433321 122332 234456677888998633332 11 111223
Q ss_pred --HHHHHHHHHHHHHcCCcEEeecCCc---cccCHHHHHHHHHHHHH---hCCCCCceeEEEecCCC
Q 007056 230 --RKFLYEILGEVIKVGATTLNIPDTV---GITMPTEFGKLIADIKA---NTPGIENVVISTHCQND 288 (620)
Q Consensus 230 --~e~l~~~~~~~~~aGa~~I~L~DTv---G~~~P~~v~~li~~l~~---~~~~~~~v~i~~H~HND 288 (620)
.+++.+.++.+.++|+..|.++-.. +.........+++.+++ .... .++.|.+|.|+.
T Consensus 105 ~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 105 QGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASR-AQVTLAMEIMDY 170 (295)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHH-HTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHH-hCCEEEEeeCCC
Confidence 3578888889999999999886110 11233444444444332 1110 137799999863
No 350
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=69.69 E-value=1.3e+02 Score=32.58 Aligned_cols=197 Identities=12% Similarity=0.144 Sum_probs=119.8
Q ss_pred CCCHHHHHHHHH-HHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIAR-QLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~-~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
.+|.+++..|.. ...+.|+|+|=+.|.. +++|...++.+.+..+.. ..+.+-. -+.+.++.. +.+..+
T Consensus 178 ~lTekD~~dl~~~~~~~~~vD~Ia~SfVr-~a~Dv~~~r~~l~~~g~~--------~~iiaKI-E~~eav~nl-deIl~~ 246 (461)
T 3qtg_A 178 TPAEEDVEALKAISPIRDNIDYVAISLAK-SCKDVDSVRSLLTELGFQ--------SQVAVKI-ETKGAVNNL-EELVQC 246 (461)
T ss_dssp SSCHHHHHHHHHHGGGGGGCCEEEECSCC-SHHHHHHHHHHHHHTTCC--------CEEEEEE-CSHHHHHTH-HHHHHT
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEEecCCC-CHHHHHHHHHHHHhcCCC--------ceEEEEE-CCHHHHHhH-HHHHHh
Confidence 477888887752 6678899999998864 788888888877653321 1222211 123333322 222222
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCc
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~ 246 (620)
.+.| +++-.|+=+ -...+++.....++++.|+..|.. |.+ |.....+-....+.+++.++. -|+|
T Consensus 247 -sDgI--mVaRGDLgv----ei~~e~v~~~Qk~ii~~~~~~gkp-vi~ATQMLeSMi~~p~PTRAEvsDVanAV~-dGaD 317 (461)
T 3qtg_A 247 -SDYV--VVARGDLGL----HYGLDALPIVQRRIVHTSLKYGKP-IAVATQLLDSMQSSPIPTRAEINDVFTTAS-MGVD 317 (461)
T ss_dssp -CSEE--EEEHHHHTT----TSCTTTHHHHHHHHHHHHHHTTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHH-TTCS
T ss_pred -cccE--EEccccccc----cCCHHHHHHHHHHHHHHHHHhCCC-EEEeccchHhhccCCCccHHHHHHHHHHHH-hCCc
Confidence 3543 444334322 234567778888999999999976 554 232444566778888888775 5999
Q ss_pred EEeec-CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH--HHHHHHHHHhcCcEEeecccc
Q 007056 247 TLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS--TANTIAGACAGARQVEVTING 313 (620)
Q Consensus 247 ~I~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA--vANslaAv~aGA~~Vd~Ti~G 313 (620)
.+-|. .|.-.-.|-+.-+.+..+....-.. .. .++...+..-+ .|-..+|-..+|..|-.|-.|
T Consensus 318 avMLSgETA~G~yPveaV~~m~~I~~~aE~~--~~-~~~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG 384 (461)
T 3qtg_A 318 SLWLTNETASGKYPLAAVSWLSRILMNVEYQ--IP-QSPLLQNSRDRFAKGLVELAQDLGANILVFSMSG 384 (461)
T ss_dssp EEEECHHHHTSSCHHHHHHHHHHHHHTCCCC--CC-CCCCCCSHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred EEEEcccccCCCCHHHHHHHHHHHHHHHHhh--hh-hccCCCCHHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99998 6877789999888888888765321 00 01222222223 333445556677755555554
No 351
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=69.64 E-value=61 Score=32.51 Aligned_cols=122 Identities=20% Similarity=0.202 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHcCCCE-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec----CCc---------------cccCHHH
Q 007056 202 IARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP----DTV---------------GITMPTE 261 (620)
Q Consensus 202 ~~~~~v~~a~~~G~~~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~----DTv---------------G~~~P~~ 261 (620)
++.+..+.+|+.|... +-|- -++.-+++...++++++.++|||.|-|. |-+ ...+...
T Consensus 6 ri~~~f~~~~~~~~~ali~yi--~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~ 83 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFV--TIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDI 83 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEE--ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEE--eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHH
Confidence 3556667777776442 3332 2456678889999999999999976554 111 2245667
Q ss_pred HHHHHHHHHHhCCCCCceeEEEecCCC--cchHHHH-HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 262 FGKLIADIKANTPGIENVVISTHCQND--LGLSTAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 262 v~~li~~l~~~~~~~~~v~i~~H~HND--~GlAvAN-slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
+-++++.+|+..+ ++||.+-..-+ +..++.+ ...+.++|++.+=.-=..+.| .+++...++..+
T Consensus 84 ~~~~v~~~r~~~~---~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee------~~~~~~~~~~~g 150 (271)
T 3nav_A 84 CFELIAQIRARNP---ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNE------SQPFVAAAEKFG 150 (271)
T ss_dssp HHHHHHHHHHHCT---TSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGG------CHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCC---CCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHH------HHHHHHHHHHcC
Confidence 7789999998754 35676654433 3344454 466789999986554344433 344555555543
No 352
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=69.26 E-value=22 Score=36.16 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=73.8
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcE-EeecC-CccccCHHHHHHHHHHHHHhCCCCCceeE
Q 007056 204 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATT-LNIPD-TVGITMPTEFGKLIADIKANTPGIENVVI 281 (620)
Q Consensus 204 ~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~-I~L~D-TvG~~~P~~v~~li~~l~~~~~~~~~v~i 281 (620)
.++++.|++.|+-.-.|+. .+.+.+..+++++.+.+... |.+.- +..++-...+..++..+.++.+ +|+
T Consensus 7 ~~ll~~A~~~~yAv~AfNv-----~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~----VPV 77 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNI-----HNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN----MPL 77 (286)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT----SCB
T ss_pred HHHHHHHHHCCCEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC----CcE
Confidence 5678889999886346776 67799999999999998654 44432 2334445778888888887763 777
Q ss_pred EEecCCCcchHHHHHHHHHHhcCcE--Eeecccccc
Q 007056 282 STHCQNDLGLSTANTIAGACAGARQ--VEVTINGIG 315 (620)
Q Consensus 282 ~~H~HND~GlAvANslaAv~aGA~~--Vd~Ti~GlG 315 (620)
.+|. |-|....-...|+++|.+- +|+|-..+-
T Consensus 78 alHl--DHg~~~e~i~~ai~~GFtSVMiDgS~lp~e 111 (286)
T 1gvf_A 78 ALHL--DHHESLDDIRRKVHAGVRSAMIDGSHFPFA 111 (286)
T ss_dssp EEEE--EEECCHHHHHHHHHTTCCEEEECCTTSCHH
T ss_pred EEEc--CCCCCHHHHHHHHHcCCCeEEECCCCCCHH
Confidence 7665 5555578899999999876 688866553
No 353
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=69.08 E-value=20 Score=34.92 Aligned_cols=196 Identities=6% Similarity=-0.034 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCC-Ch-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAA-SK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
.|-.+-...+-+.+.+.|++.+=...... .+ .+.+.++.+...- + + .|... ......+...++.+.
T Consensus 18 ~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v--d-----giii~-~~~~~~~~~~~~~~~- 85 (304)
T 3o1i_D 18 SYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWG---A--N-----AIILG-TVDPHAYEHNLKSWV- 85 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHT---C--S-----EEEEC-CSSTTSSTTTHHHHT-
T ss_pred cHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcC---C--C-----EEEEe-CCChhHHHHHHHHHc-
Confidence 34556667777888889997665543321 22 3445666665531 1 1 12111 122222223344555
Q ss_pred CCCCEEEEEecCC-----HHHHHHHhCCCHHHHHHHHHHHHHHHHHcC-----CCEEEE-cCCCCCCCCHHHHHHHHHHH
Q 007056 172 AKRPRIHTFIATS-----GIHMEHKLRKTKQQVVEIARSMVKFARSLG-----CDDVEF-SPEDAGRSDRKFLYEILGEV 240 (620)
Q Consensus 172 ag~~~v~i~~~~S-----d~h~~~~l~~t~ee~l~~~~~~v~~a~~~G-----~~~V~f-~~ed~~r~d~e~l~~~~~~~ 240 (620)
.+++.|.+-.... +-........+ +.+....+++++.+.| ...|.| +.........+.+.-+.+++
T Consensus 86 ~~iPvV~~~~~~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~~~~i~~i~~~~~~~~~~~R~~gf~~~l 162 (304)
T 3o1i_D 86 GNTPVFATVNQLDLDEEQSTLLKGEVGVD---WYWMGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAI 162 (304)
T ss_dssp TTSCEEECSSCCCCCTTTGGGEEEECCCC---HHHHHHHHHHHHHTTSBTTTCCEEEEEECCCC-----CHHHHHHHHTT
T ss_pred CCCCEEEecCCCcccccCCCceEEEEecC---HHHHHHHHHHHHHHhcccCCCCCEEEEEECCCCcchHHHHHHHHHHHH
Confidence 6888876522221 11101112333 3455667888888888 655655 33222223334555555666
Q ss_pred HHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc
Q 007056 241 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 314 (620)
Q Consensus 241 ~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl 314 (620)
.+.|...... -.+-..++...+.+..+. ..|+. .. + |.|| .+|.+-.-+.-++|.+ =|.+|.|+
T Consensus 163 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~l-~~~~~---~a-i-~~~d-~~a~g~~~al~~~g~~-~di~vvg~ 226 (304)
T 3o1i_D 163 KNSDIHIVDS--FWADNDKELQRNLVQRVI-DMGNI---DY-I-VGSA-VAIEAAISELRSADKT-HDIGLVSV 226 (304)
T ss_dssp TTBTEEEEEC--CCCCSCHHHHHHHHHHHH-HHSCC---SE-E-EECH-HHHHHHHHHHTTTTCG-GGSEEBCS
T ss_pred hcCCCEEEEe--ecCCCcHHHHHHHHHHHH-cCCCC---CE-E-EecC-cchHHHHHHHHhcCCC-CCeEEEEe
Confidence 6666544332 255567888888877766 55543 23 4 5576 5666655666677876 46777776
No 354
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=69.01 E-value=20 Score=35.96 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=74.9
Q ss_pred HHHHHHHHhcCCCCEEEEEecCC------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC-CCCC
Q 007056 162 IKTAWEAVKYAKRPRIHTFIATS------------GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRS 228 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~S------------d~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed-~~r~ 228 (620)
++.+++.....|.+.|.+..... +...+ ...+...+.+.++.++|++.|+. +.+-+.. ..-.
T Consensus 113 ~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~ 187 (340)
T 2zds_A 113 IKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIE----RGYQDFADRWNPILDVFDAEGVR-FAHEVHPSEIAY 187 (340)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHH----HHHHHHHHHHHHHHHHHHHHTCE-EEEECCTTSSCC
T ss_pred HHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchH----HHHHHHHHHHHHHHHHHHHcCCE-EEEEcCCCcccC
Confidence 34455555556888887753321 00011 11234566677788889999974 5553322 2234
Q ss_pred CHHHHHHHHHHHHHcC-CcEEeec-CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcC--
Q 007056 229 DRKFLYEILGEVIKVG-ATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGA-- 304 (620)
Q Consensus 229 d~e~l~~~~~~~~~aG-a~~I~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA-- 304 (620)
+++.+.++++.+ + ...+.++ ||.=...-. .+....+++ +. +-...+|.||..+--. ...|.
T Consensus 188 ~~~~~~~ll~~v---~~~~~vg~~~D~~H~~~~g--~d~~~~l~~-~~---~~i~~vHl~D~~~~~~------~~~g~~~ 252 (340)
T 2zds_A 188 DYWTTHRALEAV---GHRPAFGLNFDPSHFVWQD--LDPVGFLWD-FR---DRIYHVDCKEARKRLD------GRNGRLG 252 (340)
T ss_dssp SHHHHHHHHHHT---TTCTTEEEEECCHHHHHTT--CCHHHHHHH-TG---GGEEEEEECEEEECCC------SSSCTTC
T ss_pred CHHHHHHHHHhc---CCCCCeeEEEchhhHHHhC--CCHHHHHHH-HH---hhEEEEEeccCccccc------ccccccc
Confidence 667666666544 4 3333333 653221100 012222332 22 2346889998642100 00011
Q ss_pred ---------cEEeeccccccCCcCcccHHHHHHHHHhccc
Q 007056 305 ---------RQVEVTINGIGERAGNASLEEVVMAFKCRGE 335 (620)
Q Consensus 305 ---------~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~ 335 (620)
+.-.- .-+|+ |..+...++..|+..++
T Consensus 253 ~~~~~~~~~r~~~~--~~~G~--G~id~~~i~~~L~~~gy 288 (340)
T 2zds_A 253 SHLPWGDPRRGWDF--VSAGH--GDVPWEDVFRMLRSIDY 288 (340)
T ss_dssp TTCCTTCTTSSEEE--ECTTS--SCCCHHHHHHHHHHTTC
T ss_pred ccCCccccccccee--cCCCC--CccCHHHHHHHHHhcCC
Confidence 10001 12443 88999999999998663
No 355
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=68.86 E-value=17 Score=37.47 Aligned_cols=108 Identities=8% Similarity=0.076 Sum_probs=73.3
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHH-cCCC-EEEEcCCCCCCCCHHHHHHHHHHHHHc--CCcEEeec-CCccccCHHHHHH
Q 007056 190 HKLRKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRKFLYEILGEVIKV--GATTLNIP-DTVGITMPTEFGK 264 (620)
Q Consensus 190 ~~l~~t~ee~l~~~~~~v~~a~~-~G~~-~V~f~~ed~~r~d~e~l~~~~~~~~~a--Ga~~I~L~-DTvG~~~P~~v~~ 264 (620)
..-+.+.+++++-+.+.++.+++ .|+. .+.+++. -..+++...+.++.+.+. ++..|.|+ |- ....|..+.+
T Consensus 105 ~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~~a~~~~~~a~~~~~~vvG~dL~g~E-~~~~~~~~~~ 181 (326)
T 3pao_A 105 TDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL--RHLSEEQAQKTLDQALPFRDAFIAVGLDSSE-VGHPPSKFQR 181 (326)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE--TTSCHHHHHHHHHHHGGGGGGCSEEEEESCC-TTCCGGGGHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC--CCCCHHHHHHHHHHHhhccccceeeCCCCCC-CCCCHHHHHH
Confidence 34578999999999999998764 5753 1334442 134667777887777654 34445443 33 2457888888
Q ss_pred HHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEE
Q 007056 265 LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQV 307 (620)
Q Consensus 265 li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~V 307 (620)
.++..++. ++++-+|+.-..+ ..|...|+. .|+++|
T Consensus 182 ~~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~ri 218 (326)
T 3pao_A 182 VFDRARSE-----GFLTVAHAGEEGP--PEYIWEALDLLKVERI 218 (326)
T ss_dssp HHHHHHHT-----TCEECEEESSSSC--HHHHHHHHHTTCCSSE
T ss_pred HHHHHHHc-----CCceeeecCCCCC--HHHHHHHHhcCCCcee
Confidence 88888764 3678889987654 456677885 798876
No 356
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=68.69 E-value=20 Score=36.08 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=52.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeec------CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIP------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~------DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
|++++ +.+.+++-++.+++.||+.|-+. ...-+..-+|+.+++..++.-.. .+++|++-. +--.| +
T Consensus 22 DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT---~~~~V--a 94 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT---FRSEV--A 94 (270)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC---SCHHH--H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC---CCHHH--H
Confidence 56654 56888888999999999998773 22223344567766665554322 158898854 44444 4
Q ss_pred HHHHHhcCcEEeecccc
Q 007056 297 IAGACAGARQVEVTING 313 (620)
Q Consensus 297 laAv~aGA~~Vd~Ti~G 313 (620)
.+|+++||+.|+=--.|
T Consensus 95 ~~al~aGa~iINDVs~g 111 (270)
T 4hb7_A 95 EACLKLGVDMINDQWAG 111 (270)
T ss_dssp HHHHHHTCCEEEETTTT
T ss_pred HHHHHhccceecccccc
Confidence 78999999999754343
No 357
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=68.57 E-value=12 Score=40.75 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
..+.++.+.++|++.|.+.=+.| .|....+.++++++.+|+ +++.+- .++-..-+..+.++||+.|.++..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~---~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPD---LPVVAG----NVATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTT---SCEEEE----EECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCC---ceEEeC----CcCCHHHHHHHHHcCCCEEEEcCC
Confidence 34678888999999998843444 567788899999999874 455442 245556678889999999998654
Q ss_pred c
Q 007056 313 G 313 (620)
Q Consensus 313 G 313 (620)
|
T Consensus 309 ~ 309 (494)
T 1vrd_A 309 P 309 (494)
T ss_dssp C
T ss_pred C
Confidence 3
No 358
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=68.52 E-value=3.7 Score=41.95 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=70.5
Q ss_pred ceEEeecc-cchhhHHHHHHHHhcCCC------CEEEEEecCCHHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCEEEE
Q 007056 149 PVICGLSR-CNERDIKTAWEAVKYAKR------PRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEF 220 (620)
Q Consensus 149 ~~i~~~~r-~~~~dI~~a~eal~~ag~------~~v~i~~~~Sd~h~~~~l~~t~ee~-l~~~~~~v~~a~~~G~~~V~f 220 (620)
|.+.--+. +..+++..+++.+...|. +.|.+.--.+. +.. ++. ++ ..++...|+.|+. |.|
T Consensus 133 PVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~------y~~--~~~~vd--l~~i~~lk~~~~p-V~~ 201 (288)
T 3tml_A 133 PVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS------FGY--NNLVSD--MRSLAIMRETNAP-VVF 201 (288)
T ss_dssp CEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE------CSS--SCEECC--HHHHHHGGGGSSC-EEE
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC------CCC--CcCcCC--HHHHHHHHhcCCc-EEE
Confidence 55555555 478899999988877665 55555422221 111 110 01 1223344557776 777
Q ss_pred cCCCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eecCCccccCHHHHHHHHHHHHHh
Q 007056 221 SPEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 221 ~~ed~----------~r~d~e~l~~~~~~~~~aGa~~I----------~L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
++--. +--..+++..+..+++.+||+-+ .++|--=.++|+++.++++.+++-
T Consensus 202 D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ir~i 273 (288)
T 3tml_A 202 DATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLETLVTL 273 (288)
T ss_dssp EHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHHHHH
T ss_pred cCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHHHHHH
Confidence 44211 12345788999999999999832 347888899999999999998863
No 359
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=68.39 E-value=14 Score=35.13 Aligned_cols=69 Identities=19% Similarity=0.305 Sum_probs=44.8
Q ss_pred HHHHHHcCCcEEeecCCccccCH-HHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccc
Q 007056 237 LGEVIKVGATTLNIPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 314 (620)
Q Consensus 237 ~~~~~~aGa~~I~L~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~Gl 314 (620)
++.+.++|++.|.+-=. -...| ..+.++++.+++.+|+ .++.+-+|+ ...+..+.++|++.|-.+..|.
T Consensus 81 i~~~~~~Gad~v~l~~~-~~~~p~~~~~~~i~~~~~~~~~---~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 81 VDELIESQCEVIALDAT-LQQRPKETLDELVSYIRTHAPN---VEIMADIAT-----VEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHHHHHHTCSEEEEECS-CSCCSSSCHHHHHHHHHHHCTT---SEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHhCCCCEEEEeee-cccCcccCHHHHHHHHHHhCCC---ceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcC
Confidence 34456678887765322 12234 3567889999988864 456666664 4456778999999996655443
No 360
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=68.34 E-value=1.2e+02 Score=31.93 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
+.++..+.++.+.+.|++.+-+..+.....|.+.++.+.+.++..+ ...+=+..+...++..+.++.+...++.
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~~~------~l~vDaN~~~~~~~A~~~~~~l~~~~l~ 261 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERLGPAV------RIACDMHWAHTASEAVALIKAMEPHGLW 261 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCSSS------EEEEECCSCCCHHHHHHHHHHHGGGCEE
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhccCCeE------EEEeccccCCCHHHHHHHHHhhcccccc
Confidence 5777888899999999999999866555567777888877665431 1122222333444444445555555533
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 255 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG 255 (620)
.+.=.++..+ +..+.+..+..++. |.. |.+-.+...+.++ ++.++-.+..+|. +
T Consensus 262 ~iEqP~~~~d-----------------~~~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~~----i~~~a~div~~d~-~ 315 (412)
T 4h1z_A 262 FAEAPVRTED-----------------IDGLARVAASVSTA-IAV---GEEWRTVHDMVPR----VARRALAIVQPEM-G 315 (412)
T ss_dssp EEECCSCTTC-----------------HHHHHHHHHHCSSE-EEE---CTTCCSHHHHHHH----HHTTCCSEECCCH-H
T ss_pred eecCCCCccc-----------------hHHHHHHHhhcCCc-ccc---CCcccchHhHHHH----HHcCCCCEEEecC-C
Confidence 3322222221 11223333444443 432 4444555544433 3456544445563 2
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 256 ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 256 ~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
..=..+..++..... .. ++++..||-...|.++|-++
T Consensus 316 ~GGit~~~kia~~A~-~~----gi~v~~h~~~~~~i~~aa~l 352 (412)
T 4h1z_A 316 HKGITQFMRIGAYAH-VH----HIKVIPHATIGAGIFLAASL 352 (412)
T ss_dssp HHHHHHHHHHHHHHH-HT----TCEECCCCCSSCSHHHHHHH
T ss_pred CCChHHHHHHHHHHH-HC----CCcEEecCCcchHHHHHHHH
Confidence 222333444444333 33 36677776556666665443
No 361
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=68.02 E-value=40 Score=34.25 Aligned_cols=170 Identities=18% Similarity=0.204 Sum_probs=92.0
Q ss_pred HHHHhHcCCCEEEEec----CCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchh-------hHH---HHHHHH
Q 007056 104 ARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER-------DIK---TAWEAV 169 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf----P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~-------dI~---~a~eal 169 (620)
+....+.|.|.||+-. ++..|. ...++.+.+.. . .| +..+.|.+.. +++ .-++.+
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS-~g~i~~a~~~~--~-------ip-V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPS-MGVLQVVKQSV--Q-------IP-VFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCC-HHHHHHHHTTC--C-------SC-EEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCC-HHHHHHHHHhc--C-------CC-eEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 4455788999999952 222221 24455444422 1 12 4556666543 121 223445
Q ss_pred hcCCCCEEEEEecCCH--HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CCCCCCHHHHHHHHHHHHHcCCc
Q 007056 170 KYAKRPRIHTFIATSG--IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 170 ~~ag~~~v~i~~~~Sd--~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~~r~d~e~l~~~~~~~~~aGa~ 246 (620)
+.+|++.|.+=.=+.| ++ ++...+.++.++. +. |.|..- |..+ |+ .+.++.+++.|.+
T Consensus 121 ~~~GAdGvVfG~L~~dg~iD------------~~~~~~Li~~a~~--l~-vTFHRAFD~~~-d~---~~Ale~Li~lGvd 181 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDGHID------------KELCMSLMAICRP--LP-VTFHRAFDMVH-DP---MAALETLLTLGFE 181 (287)
T ss_dssp HHTTCSEEEECCBCTTSCBC------------HHHHHHHHHHHTT--SC-EEECGGGGGCS-CH---HHHHHHHHHHTCS
T ss_pred HHcCCCEEEEeeeCCCCCcC------------HHHHHHHHHHcCC--Cc-EEEECchhccC-CH---HHHHHHHHHcCCC
Confidence 5569998876432233 22 2445566666654 33 778553 4433 33 3556777788999
Q ss_pred EEeecCCccccC-HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEEeeccc
Q 007056 247 TLNIPDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVEVTIN 312 (620)
Q Consensus 247 ~I~L~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd~Ti~ 312 (620)
+|-. .|... ..+=-++++.+.+...+ ++.|-. .-|.-..|.-.-++ +|++.+|.|-.
T Consensus 182 rILT---SG~~~~a~~Gl~~Lk~Lv~~a~~--rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 182 RVLT---SGCDSSALEGLPLIKRLIEQAKG--RIVVMP----GGGITDRNLQRILEGSGATEFHCSAR 240 (287)
T ss_dssp EEEE---CTTSSSTTTTHHHHHHHHHHHTT--SSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCE
T ss_pred EEEC---CCCCCChHHhHHHHHHHHHHhCC--CCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcC
Confidence 9984 44321 11222333444443332 244432 34555667766665 89999999864
No 362
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=68.00 E-value=42 Score=32.79 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=71.8
Q ss_pred HHHHHHHhHcCCCEEEEec----CCCCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 101 LDIARQLAKLGVDIIEAGF----PAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGf----P~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
.+-++.|...|+|.|=.+- ....+ .|....++|.+..+ +|.+. -.+...++++..|..
T Consensus 56 ~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~---------iPv~~--------~~~A~~~al~~~g~~ 118 (240)
T 3ixl_A 56 VDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATG---------LPCTT--------MSTAVLNGLRALGVR 118 (240)
T ss_dssp HHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHS---------SCEEE--------HHHHHHHHHHHTTCS
T ss_pred HHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccC---------CCEEC--------HHHHHHHHHHHhCCC
Confidence 4458888899999998752 11122 24456666766432 13331 124455666667889
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC------CCCCCCHHHHHHHHHH-H-HHcCCcE
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE------DAGRSDRKFLYEILGE-V-IKVGATT 247 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e------d~~r~d~e~l~~~~~~-~-~~aGa~~ 247 (620)
+|.+..+-.. +......++..+.|++.+..... +.++.+++.+.++++. + ...|++.
T Consensus 119 rvglltpy~~---------------~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ada 183 (240)
T 3ixl_A 119 RVALATAYID---------------DVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDG 183 (240)
T ss_dssp EEEEEESSCH---------------HHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSE
T ss_pred EEEEEeCChH---------------HHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCE
Confidence 9999876321 11224456777789863333221 1335567777777777 5 4457777
Q ss_pred EeecCCc
Q 007056 248 LNIPDTV 254 (620)
Q Consensus 248 I~L~DTv 254 (620)
|.|.-|.
T Consensus 184 ivL~CT~ 190 (240)
T 3ixl_A 184 ILLSSGG 190 (240)
T ss_dssp EEEECTT
T ss_pred EEEeCCC
Confidence 7777554
No 363
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=67.95 E-value=46 Score=33.69 Aligned_cols=63 Identities=22% Similarity=0.336 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEc-CCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHH
Q 007056 194 KTKQQVVEIARSMVKFARSLGCDDVEFS-PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGK 264 (620)
Q Consensus 194 ~t~ee~l~~~~~~v~~a~~~G~~~V~f~-~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~ 264 (620)
++.+++++.+ +.+++.|...|.|. .|+. ..+.+++.++++.+.+.+. .+.=|.|..+++.+..
T Consensus 84 ls~eei~~~i----~~~~~~g~~~i~~~gGe~p-~~~~~~~~~li~~i~~~~~---~i~~s~g~l~~e~l~~ 147 (348)
T 3iix_A 84 MTPEEIVERA----RLAVQFGAKTIVLQSGEDP-YXMPDVISDIVKEIKKMGV---AVTLSLGEWPREYYEK 147 (348)
T ss_dssp CCHHHHHHHH----HHHHHTTCSEEEEEESCCG-GGTTHHHHHHHHHHHTTSC---EEEEECCCCCHHHHHH
T ss_pred CCHHHHHHHH----HHHHHCCCCEEEEEeCCCC-CccHHHHHHHHHHHHhcCc---eEEEecCCCCHHHHHH
Confidence 4555444433 33444555545552 2211 1223566666666655532 2222455555544333
No 364
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=67.77 E-value=50 Score=35.87 Aligned_cols=131 Identities=17% Similarity=0.077 Sum_probs=73.3
Q ss_pred HHHHHHHHHhHcCCCEEEEecCC-CChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 177 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v 177 (620)
+-.+.++.|.+.|+|.|++.... .++.-.+.++.+.+..++ .+.+.+.. ...++.+.+ ..+|++.|
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~--------~~Vi~g~v-~t~e~a~~l----~~aGaD~I 295 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPD--------VQVIGGNI-ATAEAAKAL----AEAGADAV 295 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTT--------SEEEEEEE-CSHHHHHHH----HHTTCSEE
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCC--------ceEEEeee-CcHHHHHHH----HHcCCCEE
Confidence 45677889999999999997532 234446788888775321 13444433 233444433 34699988
Q ss_pred EEE-ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 178 HTF-IATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 178 ~i~-~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
.+- .+.|..--....+.... .+..+.++++.+++.++. |.- +++-.+++.+.+.+ ++||+.+.+.
T Consensus 296 ~vg~g~Gs~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iP-VIa---~GGI~~~~di~kal----~~GAd~V~vG 361 (490)
T 4avf_A 296 KVGIGPGSICTTRIVAGVGVP-QISAIANVAAALEGTGVP-LIA---DGGIRFSGDLAKAM----VAGAYCVMMG 361 (490)
T ss_dssp EECSSCSTTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCC-EEE---ESCCCSHHHHHHHH----HHTCSEEEEC
T ss_pred EECCCCCcCCCccccCCCCcc-HHHHHHHHHHHhccCCCc-EEE---eCCCCCHHHHHHHH----HcCCCeeeec
Confidence 762 12221111112232211 245556666766666665 432 44555666554433 5699887765
No 365
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=67.48 E-value=7.9 Score=36.55 Aligned_cols=69 Identities=14% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+++.+.++++.+.+.|++.|.+.= .+|. ..+.++.+|+.+|. +..|++....+. .-+..|+++||+.|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~----~~~~-~~~~i~~ir~~~~~--~~~ig~~~v~~~----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITF----TVPD-ADTVIKELSFLKEK--GAIIGAGTVTSV----EQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEET----TSTT-HHHHHHHTHHHHHT--TCEEEEESCCSH----HHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC----CChh-HHHHHHHHHHHCCC--CcEEEecccCCH----HHHHHHHHcCCCEE
Confidence 4678899999999999999886632 1332 34568888887753 367887552232 34688899999999
No 366
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=67.46 E-value=1.6e+02 Score=32.92 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=100.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.+|.+++..|. .-.+.|+|+|=+.|.. +++|...++.+.+..+.. ..|.+-. -+.+.++.. +.+...
T Consensus 190 ~ltekD~~dl~-f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~~~~--------i~IiaKI-E~~eav~nl-deIl~~- 256 (606)
T 3t05_A 190 GITEKDAEDIR-FGIKENVDFIAASFVR-RPSDVLEIREILEEQKAN--------ISVFPKI-ENQEGIDNI-EEILEV- 256 (606)
T ss_dssp SSCHHHHHHHH-HHHHTTCSEEEETTCC-SHHHHHHHHHHHHHTTCC--------CEEEECC-CSHHHHHTH-HHHHHH-
T ss_pred CCChhHHHHHH-HHHHcCCCEEEECCCC-CHHHHHHHHHHHHhcCCC--------CeEEEEe-CCHHHHHhH-HHHHHh-
Confidence 47888888874 5568999999998864 788888888877653221 1222211 122333221 111111
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 247 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~~ 247 (620)
.+. ++++-.|+=++ +..+++....+++++.|+..|.. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 257 sDG--ImVARGDLgve----i~~e~vp~~Qk~ii~~~~~~gkp-vi~ATQMLeSMi~~p~PTRAEvsDVanAv~d-GaDa 328 (606)
T 3t05_A 257 SDG--LMVARGDMGVE----IPPEKVPMVQKDLIRQCNKLGKP-VITATQMLDSMQRNPRATRAEASDVANAIYD-GTDA 328 (606)
T ss_dssp CSC--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSSSGGGTTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHc-CCCE
Confidence 333 44555554443 34567777778999999999986 655 2334445667888888888764 9999
Q ss_pred Eeec-CCccccCHHHHHHHHHHHHHh
Q 007056 248 LNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 248 I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
+-|. .|.-.-.|-+.-+.+..+...
T Consensus 329 vMLSgETA~G~yPveaV~~m~~I~~~ 354 (606)
T 3t05_A 329 VMLSGETAAGLYPEEAVKTMRNIAVS 354 (606)
T ss_dssp EEECHHHHSCSCSHHHHHHHHHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHH
Confidence 9997 576667888776666666543
No 367
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=67.39 E-value=56 Score=31.28 Aligned_cols=198 Identities=12% Similarity=0.052 Sum_probs=100.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
+|-.+-...+-+.+.+.|++.+-... ...++ +.+.++.+.. ..+ ..+.... ...+.....++.++..
T Consensus 14 ~f~~~~~~gi~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~l~~---~~v-------dgiIi~~-~~~~~~~~~~~~~~~~ 81 (271)
T 2dri_A 14 PFFVSLKDGAQKEADKLGYNLVVLDS-QNNPAKELANVQDLTV---RGT-------KILLINP-TDSDAVGNAVKMANQA 81 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEC-TTCHHHHHHHHHHHTT---TTE-------EEEEECC-SSTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEeCC-CCCHHHHHHHHHHHHH---cCC-------CEEEEeC-CChHHHHHHHHHHHHC
Confidence 35556667777888889987765432 22222 2233443322 111 1122121 2223333334445556
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN 249 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~ 249 (620)
++|.|.+-....+.........+ +.+....+++++.++ |...+.| +.........+...-+.+++.+.|.....
T Consensus 82 ~iPvV~i~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~g~g~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~ 158 (271)
T 2dri_A 82 NIPVITLDRQATKGEVVSHIASD---NVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLA 158 (271)
T ss_dssp TCCEEEESSCCSSSCCSEEEEEC---HHHHHHHHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEecCCCCCCceeEEEecC---hHHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHhHHHHHHHHHHhcCCCEEEE
Confidence 88877553221110000012222 234556677777777 3345655 32222222345565666777777875433
Q ss_pred ecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 250 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 250 L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
. -.|-..++.-++.+..+.+..|+.+ .+=|.||. +|++-..++-+.|-+ |.+|.|++
T Consensus 159 ~--~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nD~-~A~g~~~al~~~g~~--dv~vvGfD 215 (271)
T 2dri_A 159 S--QPADFDRIKGLNVMQNLLTAHPDVQ----AVFAQNDE-MALGALRALQTAGKS--DVMVVGFD 215 (271)
T ss_dssp E--EECTTCHHHHHHHHHHHHHHCTTCC----EEEESSHH-HHHHHHHHHHHHTCC--SCEEEEEE
T ss_pred e--cCCCCCHHHHHHHHHHHHHhCCCcc----EEEECCCc-HHHHHHHHHHHcCCC--CcEEEEec
Confidence 2 1244567777777777666555322 56688875 344433444456763 78888875
No 368
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=67.39 E-value=29 Score=34.91 Aligned_cols=46 Identities=7% Similarity=-0.109 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec-CCccc-cCHHHHHHHHHHHHHhC
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIP-DTVGI-TMPTEFGKLIADIKANT 273 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~-DTvG~-~~P~~v~~li~~l~~~~ 273 (620)
.+.+...+.++.+.++|||.+.+. =-.-- .+++++.+.++.+.+..
T Consensus 75 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 122 (288)
T 2nuw_A 75 LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS 122 (288)
T ss_dssp SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 344455555555555566544332 11111 24455555555555544
No 369
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=67.39 E-value=37 Score=36.48 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=41.3
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc------------ccCHHHHHHHHHHHHHh
Q 007056 218 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG------------ITMPTEFGKLIADIKAN 272 (620)
Q Consensus 218 V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG------------~~~P~~v~~li~~l~~~ 272 (620)
|..+.+.++- ++..+.+.++.++++|+-.|+|-|.++ ...++++.+.|+..+..
T Consensus 155 viaD~DtGyG-~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A 220 (435)
T 3lg3_A 155 IVADAEAGFG-GVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLA 220 (435)
T ss_dssp EEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHH
T ss_pred eEEECCCCCC-CcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHH
Confidence 7788865544 555788999999999999999999985 23566777777777643
No 370
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=67.36 E-value=1.1e+02 Score=30.76 Aligned_cols=195 Identities=12% Similarity=0.127 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
|-.+-...|-+.+.+.|++.+=. .....+ .+.+.++.+... .+. |+ |. +..... +..++.+...+
T Consensus 84 ~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~---~vd---Gi---I~-~~~~~~---~~~~~~l~~~~ 149 (355)
T 3e3m_A 84 HFAQTAQSLTDVLEQGGLQLLLG-YTAYSPEREEQLVETMLRR---RPE---AM---VL-SYDGHT---EQTIRLLQRAS 149 (355)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEE-ECTTCHHHHHHHHHHHHHT---CCS---EE---EE-ECSCCC---HHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEE-eCCCChHHHHHHHHHHHhC---CCC---EE---EE-eCCCCC---HHHHHHHHhCC
Confidence 44566677888889999976544 322233 234555555542 111 21 21 211111 23344455678
Q ss_pred CCEEEEEec-CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCC-CHHHHHHHHHHHHHcCCcE---
Q 007056 174 RPRIHTFIA-TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRS-DRKFLYEILGEVIKVGATT--- 247 (620)
Q Consensus 174 ~~~v~i~~~-~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~-d~e~l~~~~~~~~~aGa~~--- 247 (620)
++.|.+... ..+.. .....+ +.+....+++++.++|...+.| +....... ..+.+.-+.+++.+.|...
T Consensus 150 iPvV~i~~~~~~~~~--~~V~~D---~~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~ 224 (355)
T 3e3m_A 150 IPIVEIWEKPAHPIG--HTVGFS---NERAAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQE 224 (355)
T ss_dssp SCEEEESSCCSSCSS--EEEECC---HHHHHHHHHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHTTSCSCCE
T ss_pred CCEEEECCccCCCCC--CEEEeC---hHHHHHHHHHHHHHCCCCeEEEEccCcccChhHHHHHHHHHHHHHHCCcCCCcc
Confidence 998866211 11100 012222 2455667888999999876665 22111122 3466777778888888642
Q ss_pred EeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 248 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 248 I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
+.+ ..+...++.-++.+..+.+..+..+ .+=|.||. +|+.-..++-++|.+. =|.+|.|++
T Consensus 225 ~~~--~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nD~-~A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 225 IRL--GAPPLSIEDGVAAAELILQEYPDTD----CIFCVSDM-PAFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp EEE--SCSSCCHHHHHHHHHHHHHHCTTCC----EEEESSHH-HHHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred EEE--ecCCCCHHHHHHHHHHHHcCCCCCc----EEEECChH-HHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 222 2234456777777777766655432 34477763 4444444555678653 267788865
No 371
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=67.33 E-value=12 Score=39.58 Aligned_cols=68 Identities=24% Similarity=0.282 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEE-ecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 234 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~-H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
.+.++.+.++|++.|.| ++ +...|..+.++|+++++.+|+ ++|.+ ..+ ...-+..+.++||+.|.++.
T Consensus 155 ~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~---~pviv~~v~-----~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPN---LDLIAGNIV-----TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTT---CEEEEEEEC-----SHHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCC---CeEEEcCCC-----cHHHHHHHHhcCCCEEEECC
Confidence 45567778899999987 32 234678899999999999863 55665 233 25667888899999999853
No 372
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=67.05 E-value=28 Score=38.13 Aligned_cols=72 Identities=21% Similarity=0.269 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
..+.++++.++|++.|.+-.+.| .+..+.++|+++++.+|+ +++..-.=. ...-+..++++||+.|..
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~---~~vi~g~v~----t~e~a~~~~~aGad~i~v--- 324 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPS---LNIIAGNVA----TAEATKALIEAGANVVKV--- 324 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---SEEEEEEEC----SHHHHHHHHHHTCSEEEE---
T ss_pred hHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCC---ceEEeeeec----cHHHHHHHHHhCCCEEEE---
Confidence 35667888999999998876655 456788999999999974 444432111 245578899999999986
Q ss_pred cccC
Q 007056 313 GIGE 316 (620)
Q Consensus 313 GlGE 316 (620)
|+|.
T Consensus 325 g~g~ 328 (511)
T 3usb_A 325 GIGP 328 (511)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 5544
No 373
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=66.88 E-value=14 Score=38.40 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=75.3
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHcCCcEEeecCCccc---cCHHHHHHHHHHHHHhCCCCCceeEEEe-cCCCcchHHHH
Q 007056 221 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 295 (620)
Q Consensus 221 ~~ed-~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 295 (620)
.|.+ .+..|.+-+.++++.+++.|++-|.++=|+|= ++++|-.++++. .. .+ +++|-++ ++|+.--++.-
T Consensus 36 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~--~g--rvpViaGvg~~st~eai~l 110 (344)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LV--KA--GIPVIVGTGAVNTASAVAH 110 (344)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HH--HT--TCCEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-Hh--CC--CCcEEEecCCCCHHHHHHH
Confidence 4433 35789999999999999999999999999885 688888888887 22 22 2444444 57888889999
Q ss_pred HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 296 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 296 slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
+..|-++||+.+=..---+-.. .+-++++..++
T Consensus 111 a~~A~~~Gadavlv~~P~y~~~---~s~~~l~~~f~ 143 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIPRVLSRG---SVIAAQKAHFK 143 (344)
T ss_dssp HHHHHHHTCSEEEECCCCSSST---TCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCccCCC---CCHHHHHHHHH
Confidence 9999999999987654433221 24466665443
No 374
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=66.85 E-value=55 Score=34.12 Aligned_cols=67 Identities=12% Similarity=0.123 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 234 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
.+.++.+.++|++.|.|-=+. ..|..+.+.++.+++.++ +++.+..= ....-+..++++||+.|.++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~--G~~~~~~~~i~~i~~~~~----~~Vivg~v----~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAH--GHSLNIIRTLKEIKSKMN----IDVIVGNV----VTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSC--CSBHHHHHHHHHHHHHCC----CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEeCCC--CCcHHHHHHHHHHHHhcC----CcEEEccC----CCHHHHHHHHHcCcCEEEEe
Confidence 567788889999988763222 357788899999999873 34443111 22456788999999999873
No 375
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=66.80 E-value=19 Score=36.00 Aligned_cols=92 Identities=15% Similarity=0.093 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecC-CccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHh--cC
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPD-TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA--GA 304 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~D-TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a--GA 304 (620)
.+++.+.+.++...+.||+.|-+.= ......++++.+++..+.+.. +++|++=+=+ ..-..+|+++ |+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~----~~pisIDT~~-----~~v~~aAl~a~~Ga 92 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS----NLTLCLDSTN-----IKAIEAGLKKCKNR 92 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC----CSEEEEECSC-----HHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC----CCeEEEeCCC-----HHHHHHHHhhCCCC
Confidence 3678888999999999999888762 233456788999999998753 4788885443 3445677887 99
Q ss_pred cEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 305 RQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 305 ~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
+.|+.- +|. .-++++++......+
T Consensus 93 ~iINdv-s~~-----~d~~~~~~~~~a~~~ 116 (262)
T 1f6y_A 93 AMINST-NAE-----REKVEKLFPLAVEHG 116 (262)
T ss_dssp EEEEEE-CSC-----HHHHHHHHHHHHHTT
T ss_pred CEEEEC-CCC-----cccHHHHHHHHHHhC
Confidence 999632 331 234556666555544
No 376
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=66.69 E-value=1.1e+02 Score=30.68 Aligned_cols=200 Identities=11% Similarity=0.167 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHhHc-CCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe-----------ecccch--
Q 007056 94 TLTSKEKLDIARQLAKL-GVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-----------LSRCNE-- 159 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~-Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-----------~~r~~~-- 159 (620)
..+.+++++.+ .++ |++.||+.+|-..+.+.+.++.+.+..+-.+ ..+.. ++...+
T Consensus 32 ~~~~~e~l~~a---a~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i-------~~~~~~~~~~~~~~g~l~~~d~~~ 101 (333)
T 3ktc_A 32 ALSTIDQINAA---KEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKA-------IGITPEIYLQKWSRGAFTNPDPAA 101 (333)
T ss_dssp CCCHHHHHHHH---HHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEE-------EEEEECTTSGGGTTCSTTCSSHHH
T ss_pred CCCHHHHHHHH---HHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeE-------EEEecCcCcccccCCCCCCcCHHH
Confidence 46776665554 566 9999999887544566777777766533211 11111 111111
Q ss_pred -----hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc----CCCEEEEcCCC----CC
Q 007056 160 -----RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL----GCDDVEFSPED----AG 226 (620)
Q Consensus 160 -----~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~----G~~~V~f~~ed----~~ 226 (620)
+.++++++.....|.+.|.++.+.... ..-...+.++.++.+.+.++.+-+. |+ .+++-|.. ..
T Consensus 102 r~~~i~~~~~~i~~A~~LGa~~vv~~~g~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i-~lE~~p~~~~~~~~ 178 (333)
T 3ktc_A 102 RAAAFELMHESAGIVRELGANYVKVWPGQDGW--DYPFQVSHKNLWKLAVDGMRDLAGANPDVKF-AIEYKPREPRVKMT 178 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--SSTTSSCHHHHHHHHHHHHHHHHHTCTTSEE-EEECCSCSSSSEES
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCCCc--CCCCcCCHHHHHHHHHHHHHHHHHHhhcCCE-EEEEecCCCCcccc
Confidence 123344554455588887665431000 0001234555555555555444433 32 24432321 12
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEee-cCCccc----cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNI-PDTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 301 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L-~DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 301 (620)
-.+.+.+.++++.+ +.+.+.+ -||.=. ..|.+ .++.++. .+ -...+|.++..|
T Consensus 179 ~~~~~~~~~ll~~v---~~~~vgl~lD~~H~~~~g~~~~~---~~~~~~~-~~----~i~~vH~~D~~~----------- 236 (333)
T 3ktc_A 179 WDSAARTLLGIEDI---GLDNVGVLLDFGHALYGGESPAD---SAQLIID-RG----RLFGMDVNDNLR----------- 236 (333)
T ss_dssp SCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHTTCCHHH---HHHHHHH-TT----CEEEEEBCBCCS-----------
T ss_pred CCCHHHHHHHHHHc---CCcceEEEEecCcHhhhcCCHHH---HHHHHHh-CC----CEEEEEeCCCCC-----------
Confidence 34566666666554 4332333 354211 22332 3332221 12 235788887543
Q ss_pred hcCcEEeeccccccCCcCc-ccHHHHHHHHHhccc
Q 007056 302 AGARQVEVTINGIGERAGN-ASLEEVVMAFKCRGE 335 (620)
Q Consensus 302 aGA~~Vd~Ti~GlGERaGN-a~lEevv~~L~~~~~ 335 (620)
+.+ +... +| .|+ .++.+++..|+..|+
T Consensus 237 -~~d--~~~~--~G--~G~~~d~~~i~~~L~~~gy 264 (333)
T 3ktc_A 237 -GWD--DDLV--VG--TVHMTEIFEFFYVLKINNW 264 (333)
T ss_dssp -SSC--CCBC--TT--SSCHHHHHHHHHHHHHTTC
T ss_pred -CCC--CCcC--CC--CCCHHHHHHHHHHHHHcCC
Confidence 111 1111 23 578 699999999998764
No 377
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=66.66 E-value=61 Score=31.43 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCcccc---CHHHHHHHHHHHHHhCCCCC-ceeEEEecCCCcchHHHHHHHHHHhc
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAG 303 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~---~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~aG 303 (620)
.+.+-...-++.+++.||+.|-+.=-.|.. .-.++.+-+..+++..++.. ++.|+.-..++--. .--+..|+++|
T Consensus 68 ~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i-~~a~~ia~eaG 146 (220)
T 1ub3_A 68 QEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEI-ARLAEAAIRGG 146 (220)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHH-HHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHH-HHHHHHHHHhC
Confidence 344544455566677787777665556643 44556666666666543210 23344433333222 23456788999
Q ss_pred CcEEeeccccccCCcCcccHHHHHHHHH
Q 007056 304 ARQVEVTINGIGERAGNASLEEVVMAFK 331 (620)
Q Consensus 304 A~~Vd~Ti~GlGERaGNa~lEevv~~L~ 331 (620)
|+.|-++- |.+ +|++.+|++-...+
T Consensus 147 ADfVKTsT-Gf~--~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 147 ADFLKTST-GFG--PRGASLEDVALLVR 171 (220)
T ss_dssp CSEEECCC-SSS--SCCCCHHHHHHHHH
T ss_pred CCEEEeCC-CCC--CCCCCHHHHHHHHH
Confidence 99999885 222 47888887665444
No 378
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=66.39 E-value=25 Score=36.50 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||=.+| +.|++..+++++...- |.+.+=.-.+..+++..++.
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~i~~--- 260 (370)
T 1nu5_A 196 NQGWDEQTASIWIPRLEEAGVELVEQPVP---RANFGALRRLTEQNGV---------AILADESLSSLSSAFELARD--- 260 (370)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCCEEECCSC---TTCHHHHHHHHHHCSS---------EEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCcceEeCCCC---cccHHHHHHHHHhCCC---------CEEeCCCCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
..++.|.+ +..+---+..+.++++.|+++|+. +..+....+
T Consensus 261 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 301 (370)
T 1nu5_A 261 HAVDAFSL-------------KLCNMGGIANTLKVAAVAEAAGIS-SYGGTMLDS 301 (370)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEE-------------chhhcCCHHHHHHHHHHHHHcCCc-EEecCCcch
No 379
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=66.25 E-value=40 Score=34.61 Aligned_cols=92 Identities=16% Similarity=0.105 Sum_probs=59.7
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC--CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEE
Q 007056 206 MVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG--ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST 283 (620)
Q Consensus 206 ~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG--a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~ 283 (620)
.++.+++.|+. +..+. -.+++.+ +.++.+.++| ++.|.+ |+ +...|....+.|+++++.+++ .++.
T Consensus 86 ~i~~~~~~g~~-v~v~~----g~~~~~~-~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~---~~vi- 153 (336)
T 1ypf_A 86 FIRDMQSRGLI-ASISV----GVKEDEY-EFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPE---SFVI- 153 (336)
T ss_dssp HHHHHHHTTCC-CEEEE----CCSHHHH-HHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTT---SEEE-
T ss_pred HHHHHHhcCCe-EEEeC----CCCHHHH-HHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCC---CEEE-
Confidence 35556666753 33321 1233433 5678888999 888765 22 123778889999999999864 2333
Q ss_pred ecCCCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 284 HCQNDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 284 H~HND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
.. ..+....+..|+++||+.|.++-.
T Consensus 154 ~G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 154 AG---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred EC---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 21 234567899999999999988543
No 380
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=65.97 E-value=40 Score=33.64 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=96.3
Q ss_pred CcccCCCCCCCCCHHHHHHHH---HHHhHcCCCEEEEecCCC-ChhHHHHHHHHHHHhcccccccCCccceEEeecccc-
Q 007056 84 LRDGEQSPGATLTSKEKLDIA---RQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN- 158 (620)
Q Consensus 84 LRDG~Qs~g~~fs~~~Kl~Ia---~~L~~~Gvd~IEvGfP~~-s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~- 158 (620)
+|-| ++.++.+|...+. +.+.++|++-|-+|+-.. ..-|.+.+++|.+..+. + =+.|-|+-
T Consensus 60 PR~G----dF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~-------~---~vTFHRAfD 125 (256)
T 1twd_A 60 PRGG----DFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGP-------L---AVTFHRAFD 125 (256)
T ss_dssp SSSS----CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTT-------S---EEEECGGGG
T ss_pred CCCC----CCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCC-------C---cEEEECchh
Confidence 4555 4667877765554 467789999999998632 33478899988875432 1 24566764
Q ss_pred -hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHH
Q 007056 159 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 237 (620)
Q Consensus 159 -~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~ 237 (620)
-.|...+++.|.+.|+++|-..... .+..+.++.+.++++++. . ++.-| ++-.+++.+.+++
T Consensus 126 ~~~d~~~ale~L~~lG~~rILTSG~~----------~~a~~g~~~L~~Lv~~a~--~---i~Im~--GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 126 MCANPLYTLNNLAELGIARVLTSGQK----------SDALQGLSKIMELIAHRD--A---PIIMA--GAGVRAENLHHFL 188 (256)
T ss_dssp GCSCHHHHHHHHHHHTCCEEEECTTS----------SSTTTTHHHHHHHHTSSS--C---CEEEE--ESSCCTTTHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEECCCCC----------CCHHHHHHHHHHHHHhhC--C---cEEEe--cCCcCHHHHHHHH
Confidence 2466788999888899998654322 244567778888877644 2 33322 2233334444443
Q ss_pred HHHHHcCCcEEeec------C--------------------CccccCHHHHHHHHHHHHHhCC
Q 007056 238 GEVIKVGATTLNIP------D--------------------TVGITMPTEFGKLIADIKANTP 274 (620)
Q Consensus 238 ~~~~~aGa~~I~L~------D--------------------TvG~~~P~~v~~li~~l~~~~~ 274 (620)
+.|++.+-+. . ......+..+++++..+.+...
T Consensus 189 ----~tGv~e~H~Sa~~~~~s~~~~~~~~v~mg~~~~~~~~~~~~td~~~V~~~~~~l~~~~~ 247 (256)
T 1twd_A 189 ----DAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKGIIERHQA 247 (256)
T ss_dssp ----HHTCSEEEECCEEEECCCCCCCC-------------CCEEEECHHHHHHHHHHHHHHHH
T ss_pred ----HcCCCeEeECCccccCCcccccccccccCcccccccccccccCHHHHHHHHHHHHHHHh
Confidence 4576655422 1 1234566788888887776543
No 381
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=65.80 E-value=34 Score=35.84 Aligned_cols=105 Identities=8% Similarity=0.040 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHHHHHHH-cCCC-EEEEcCCCCCCCCHHHHHHHHHHHHHc---CCcEEeecCCccccCH---HHHHH
Q 007056 193 RKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRKFLYEILGEVIKV---GATTLNIPDTVGITMP---TEFGK 264 (620)
Q Consensus 193 ~~t~ee~l~~~~~~v~~a~~-~G~~-~V~f~~ed~~r~d~e~l~~~~~~~~~a---Ga~~I~L~DTvG~~~P---~~v~~ 264 (620)
+.+.+++++-+.+.++.++. .|+. .+.+++. |.-++...++++.+.+. |+..|-|+=-=....| ..+.+
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~---R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~ 196 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVKARSILCCM---RHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQ 196 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE---TTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeC---CCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHH
Confidence 68999999999999988764 5764 1244443 33333456677766664 3444555422223344 67888
Q ss_pred HHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEE
Q 007056 265 LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQV 307 (620)
Q Consensus 265 li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~V 307 (620)
.++..++. ++++-+|+.-..+. .|...|+. .|+++|
T Consensus 197 ~f~~A~~~-----gl~~~~HagE~~~~--~~i~~al~~lg~~RI 233 (367)
T 3iar_A 197 AYQEAVKS-----GIHRTVHAGEVGSA--EVVKEAVDILKTERL 233 (367)
T ss_dssp HHHHHHHH-----TCEEEEEESSSSCH--HHHHHHHHTSCCSEE
T ss_pred HHHHHHHc-----CCeeEEecCCcCCh--HHHHHHHHccCCcee
Confidence 88887764 36799999877653 56678885 799886
No 382
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=65.71 E-value=30 Score=34.02 Aligned_cols=112 Identities=10% Similarity=-0.014 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-------C-CCCCCC-
Q 007056 159 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-------E-DAGRSD- 229 (620)
Q Consensus 159 ~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-------e-d~~r~d- 229 (620)
..+++..++.++.+|.+.|.+...... . ..+.+..+.+++.|+..+.+.+ . +....+
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~~~-------~-------~~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~ 105 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRDPS-------I-------VDWNEVKILSEELNLPICAIGTGQAYLADGLSLTHPND 105 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSCGG-------G-------SCHHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCCcc-------h-------hhHHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCH
Confidence 346666777777779999988765211 1 1233555677788987335544 1 122123
Q ss_pred ------HHHHHHHHHHHHHcCCcEEeecCCccc----cCHHHHHHHHHHHH---HhCCCCCceeEEEecCCC
Q 007056 230 ------RKFLYEILGEVIKVGATTLNIPDTVGI----TMPTEFGKLIADIK---ANTPGIENVVISTHCQND 288 (620)
Q Consensus 230 ------~e~l~~~~~~~~~aGa~~I~L~DTvG~----~~P~~v~~li~~l~---~~~~~~~~v~i~~H~HND 288 (620)
.+++.+.++.+.+.|+..|..+ ..|. .....+..+++.++ +.... +.|.+|.|++
T Consensus 106 ~~r~~~~~~~~~~i~~A~~lG~~~v~~~-~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~---v~l~lEn~~~ 173 (290)
T 2zvr_A 106 EIRKKAIERVVKHTEVAGMFGALVIIGL-VRGRREGRSYEETEELFIESMKRLLELTEH---AKFVIEPLNR 173 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESG-GGCCCTTSCHHHHHHHHHHHHHHHHHHCSS---CCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEec-CCCCCCCcCHHHHHHHHHHHHHHHHHHhcc---CEEEEEeCCC
Confidence 3678888888999999988733 1233 22333444444444 33332 7799998874
No 383
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=65.69 E-value=12 Score=39.29 Aligned_cols=103 Identities=8% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||-.+| +.|++..+++++...- |.+.+=.-....+++..++.
T Consensus 202 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 266 (391)
T 2qgy_A 202 AVPEDLDQTKSFLKEVSSFNPYWIEEPVD---GENISLLTEIKNTFNM---------KVVTGEKQSGLVHFRELISR--- 266 (391)
T ss_dssp CCCSCHHHHHHHHHHHGGGCCSEEECSSC---TTCHHHHHHHHHHCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHhhCCC---------CEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
..++.|.+ +..+---+..+.++++.|+++|+. +..++.
T Consensus 267 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~ 304 (391)
T 2qgy_A 267 NAADIFNP-------------DISGMGGLIDIIEISNEASNNGIF-ISPHCW 304 (391)
T ss_dssp TCCSEECC-------------BTTTSSCHHHHHHHHHHHHHTTCE-ECCBCC
T ss_pred CCCCEEEE-------------CcchhCCHHHHHHHHHHHHHCCCE-EeccCC
No 384
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=65.35 E-value=17 Score=39.56 Aligned_cols=67 Identities=19% Similarity=0.146 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 234 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
.+.++++.++|++.|.|-=+.| .+..+.+.|+++++.+|+ +++..- ......-+..++++||+.|..
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~v~~i~~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHG--HSKGVIERVRWVKQTFPD---VQVIGG----NIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCC--SBHHHHHHHHHHHHHCTT---SEEEEE----EECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCC--cchhHHHHHHHHHHHCCC---ceEEEe----eeCcHHHHHHHHHcCCCEEEE
Confidence 4667888899999888743333 456788999999999974 445441 112345678899999999986
No 385
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=65.34 E-value=24 Score=37.15 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhc
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKY 171 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~ 171 (620)
..++.++-+++++.|.+.|++.||--+| +.|++..+++++... +| |++=.+ ....+++..++.
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iP-Ia~dE~~~~~~~~~~~i~~--- 261 (397)
T 2qde_A 198 GAWTYDQALTTIRALEKYNLSKIEQPLP---AWDLDGMARLRGKVA---------TP-IYADESAQELHDLLAIINK--- 261 (397)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHTTCS---------SC-EEESTTCCSHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEECCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCcCCHHHHHHHHHc---
Confidence 3578999999999999999999997543 466777887776431 13 333222 234566655543
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..++.|.+ +. .+---+..+.++++.|+++|+. +..++
T Consensus 262 ~~~d~v~i--k~-----------~~~GGit~~~~i~~~A~~~g~~-~~~~~ 298 (397)
T 2qde_A 262 GAADGLMI--KT-----------QKAGGLLKAQRWLTLARLANLP-VICGC 298 (397)
T ss_dssp TCCSEEEE--CH-----------HHHTSHHHHHHHHHHHHHHTCC-EEECC
T ss_pred CCCCEEEE--ec-----------cccCCHHHHHHHHHHHHHcCCe-EEEec
Confidence 34666654 11 0111256677889999999986 66664
No 386
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=65.33 E-value=22 Score=37.01 Aligned_cols=102 Identities=13% Similarity=0.178 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..++.++-+++++.|.+.|++.||=-+| +.|++..+++++..+ .|...+=.-....+++..++ ..
T Consensus 193 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~~~---~~ 257 (368)
T 3q45_A 193 QGWSVETAIETLTLLEPYNIQHCEEPVS---RNLYTALPKIRQACR---------IPIMADESCCNSFDAERLIQ---IQ 257 (368)
T ss_dssp TCBCHHHHHHHHHHHGGGCCSCEECCBC---GGGGGGHHHHHHTCS---------SCEEESTTCCSHHHHHHHHH---TT
T ss_pred CCCChHHHHHHHHHHhhcCCCEEECCCC---hhHHHHHHHHHhhCC---------CCEEEcCCcCCHHHHHHHHH---cC
Confidence 4578999999999999999999997443 456777777776431 13222211124455555444 23
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
.++.|.+= . ++---+..+.++++.|+++|+. +..++.
T Consensus 258 ~~d~v~~k--~-----------~~~GGit~~~~i~~~A~~~gi~-~~~~~~ 294 (368)
T 3q45_A 258 ACDSFNLK--L-----------SKSAGITNALNIIRLAEQAHMP-VQVGGF 294 (368)
T ss_dssp CCSEEEEC--T-----------TTTTSHHHHHHHHHHHHHTTCC-EEECCS
T ss_pred CCCeEEec--h-----------hhcCCHHHHHHHHHHHHHcCCc-EEecCc
Confidence 45665541 1 1112255677889999999986 666553
No 387
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=65.30 E-value=47 Score=34.83 Aligned_cols=80 Identities=9% Similarity=-0.049 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCCccccCHHH---HHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 231 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMPTE---FGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L-------------------~DTvG~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
+.+.+.++.+.++|.|.|-| .|-.|...-++ +.++|+.+++.++.. .+.+-+..++.
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~ 244 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLE 244 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEeccccc
Confidence 45556677778899998776 25556654344 667789999888631 23333334321
Q ss_pred c-----ch----HHHHHHHHHHhcCcEEeecc
Q 007056 289 L-----GL----STANTIAGACAGARQVEVTI 311 (620)
Q Consensus 289 ~-----Gl----AvANslaAv~aGA~~Vd~Ti 311 (620)
+ |. ++.-+...-++|++.|+.+-
T Consensus 245 ~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 245 LFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp CTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 22 23334455578999999865
No 388
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=64.94 E-value=21 Score=40.23 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=12.4
Q ss_pred eEeeeccccHHH--HHHHHHHcCCC
Q 007056 412 GIVLGKLSGRHA--LKDRLKELGYE 434 (620)
Q Consensus 412 ~i~lg~~SG~~~--i~~~l~~lG~~ 434 (620)
.++|| +|-++ .+..|.+.|++
T Consensus 376 vvIIG--gG~AGl~aA~~l~~~g~~ 398 (671)
T 1ps9_A 376 LAVVG--AGPAGLAFAINAAARGHQ 398 (671)
T ss_dssp EEEEC--CSHHHHHHHHHHHTTTCE
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCe
Confidence 47888 44444 34556667765
No 389
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=64.93 E-value=21 Score=36.97 Aligned_cols=106 Identities=13% Similarity=0.203 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||=-+| +.|++..+++++...- |.+.+=.-....+++..++.
T Consensus 191 n~~~~~~~a~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~l~~--- 255 (354)
T 3jva_A 191 NQAWTPKDAVKAIQALADYQIELVEQPVK---RRDLEGLKYVTSQVNT---------TIMADESCFDAQDALELVKK--- 255 (354)
T ss_dssp TTCSCHHHHHHHHHHTTTSCEEEEECCSC---TTCHHHHHHHHHHCSS---------EEEESTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHHhCCC---------CEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC-CC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed-~~ 226 (620)
...+.|.+ +.++---+..+.++++.|+++|+. +..++.. .+
T Consensus 256 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~~~es 297 (354)
T 3jva_A 256 GTVDVINI-------------KLMKCGGIHEALKINQICETAGIE-CMIGCMAEET 297 (354)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCCTTCC
T ss_pred CCCCEEEE-------------CchhcCCHHHHHHHHHHHHHcCCe-EEecCCCccc
No 390
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=64.83 E-value=7.8 Score=39.64 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=45.1
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--C----ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 224 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--T----VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 224 d~~r~-d~e~l~~~~~~~~~aGa~~I~L~D--T----vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
|++++ +++.+.+.++...+.||+.|-+.= | ..+...+|+.+++..++.-... +++|++=+=+ ..-+
T Consensus 44 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT~~-----~~Va 116 (294)
T 2dqw_A 44 DGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDTRK-----PEVA 116 (294)
T ss_dssp ---------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEECSC-----HHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEECCC-----HHHH
Confidence 56655 678888889999999999887652 1 1233345666655555443211 4778885443 3445
Q ss_pred HHHHHhcCcEEeec
Q 007056 297 IAGACAGARQVEVT 310 (620)
Q Consensus 297 laAv~aGA~~Vd~T 310 (620)
.+|+++||+.|+-.
T Consensus 117 ~aAl~aGa~iINdV 130 (294)
T 2dqw_A 117 EEALKLGAHLLNDV 130 (294)
T ss_dssp HHHHHHTCSEEECS
T ss_pred HHHHHhCCCEEEEC
Confidence 78888999998643
No 391
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=64.74 E-value=27 Score=36.64 Aligned_cols=81 Identities=10% Similarity=-0.057 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCcEEeec-------------------CCccccCHHH---HHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 231 KFLYEILGEVIKVGATTLNIP-------------------DTVGITMPTE---FGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~-------------------DTvG~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
+.+.+.++.+.++|.|.|-|= |-.|....++ +.++|+.+|+.++.. .+.+-++..+.
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~ 245 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccc
Confidence 455566777888999877662 4455544333 678889999988641 24444444332
Q ss_pred -----cch----HHHHHHHHHHhcCcEEeeccc
Q 007056 289 -----LGL----STANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 289 -----~Gl----AvANslaAv~aGA~~Vd~Ti~ 312 (620)
.+. ++.-+...-++|++.|+.+-.
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 122 333334445679999988753
No 392
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=64.27 E-value=91 Score=32.72 Aligned_cols=160 Identities=14% Similarity=0.042 Sum_probs=95.9
Q ss_pred chhhHHH-HHHHHhcCCCC-EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCEEE--EcCCCCCCCCHHH
Q 007056 158 NERDIKT-AWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVE--FSPEDAGRSDRKF 232 (620)
Q Consensus 158 ~~~dI~~-a~eal~~ag~~-~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~-~~G~~~V~--f~~ed~~r~d~e~ 232 (620)
.++|+.+ +++.+..+-.+ .+.+-+-.++.+....-|.+.+++++-+.+.++.++ +.|+. +. +++. -..+++.
T Consensus 90 t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~-~rlI~~~~--R~~~~e~ 166 (380)
T 4gxw_A 90 RPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIG-ARLIPSID--REQDPDE 166 (380)
T ss_dssp SHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEE--TTSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCc-EEEEEeec--CCCCHHH
Confidence 4556544 34444433222 233333345554444457899999999999988775 45764 33 3432 1245788
Q ss_pred HHHHHHHHHHcC---CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHH-hcCcEEe
Q 007056 233 LYEILGEVIKVG---ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 308 (620)
Q Consensus 233 l~~~~~~~~~aG---a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd 308 (620)
..++++.+.+.- +--|.|+=.=-...|..+.+.+...++. ++++-+|+=-. |....|...|++ .|+++|.
T Consensus 167 a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~-----Gl~~t~HAGE~-~~p~~~i~~al~~lga~RIg 240 (380)
T 4gxw_A 167 AVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAA-----GFRTTAHAGEF-GMPWRNVETAVDLLHVDRVD 240 (380)
T ss_dssp HHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESCT-TCCHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc-----CCCeeeecccc-CCchHHHHHHHHHcCCcccc
Confidence 888888887653 3344554222235688889999988875 36799999753 333457778885 6999985
Q ss_pred eccccccCCcCcccHHHHHHHHHhc
Q 007056 309 VTINGIGERAGNASLEEVVMAFKCR 333 (620)
Q Consensus 309 ~Ti~GlGERaGNa~lEevv~~L~~~ 333 (620)
=.+.= ..=++++..|..+
T Consensus 241 HG~~~-------~~d~~L~~~l~~~ 258 (380)
T 4gxw_A 241 HGYTI-------VDNPELCARYAER 258 (380)
T ss_dssp ECGGG-------GGCHHHHHHHHHH
T ss_pred cceee-------ccChHHHHHHHHh
Confidence 33221 1123456666654
No 393
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=63.91 E-value=13 Score=37.16 Aligned_cols=130 Identities=9% Similarity=0.008 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHH
Q 007056 159 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILG 238 (620)
Q Consensus 159 ~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~ 238 (620)
..+.+..++++..+|.+.|.+-++-++. .+.+.+..++. +++.... +..++ .+..++++...+++
T Consensus 22 ~p~~~~~~~~l~~~Gad~ielg~pr~~~-----~g~~~~~~~~~-------l~~~~~~-~~pn~--~~~~~~~~~~~f~~ 86 (264)
T 1xm3_A 22 YPSFDIQKEAVAVSESDILTFAVRRMNI-----FEASQPNFLEQ-------LDLSKYT-LLPNT--AGASTAEEAVRIAR 86 (264)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEETTSSTT-----C-------CTT-------CCGGGSE-EEEEC--TTCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCeEEEEccccccc-----CCCCHHHHHHH-------HHhcCCe-EcCCc--cccCCHHHHHHHHH
Confidence 3455555566666799988776664431 13444444443 2233332 32344 45677887778888
Q ss_pred HHHHcCCcEE----eecCCccccCHHHHHHHHHHHHHhCCCCCceeEE-EecCCCcchHHHHHHHHHHhcCcEEeecccc
Q 007056 239 EVIKVGATTL----NIPDTVGITMPTEFGKLIADIKANTPGIENVVIS-THCQNDLGLSTANTIAGACAGARQVEVTING 313 (620)
Q Consensus 239 ~~~~aGa~~I----~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~-~H~HND~GlAvANslaAv~aGA~~Vd~Ti~G 313 (620)
.+.++|.+.+ .++|.- ..+++..++++.+++.+++ ++.+. +-+|+ . .-+..+.++|++.| .+..|
T Consensus 87 ~a~~agg~~~i~l~i~~d~~--~~~~e~~~~~~~a~~~~~~--g~~vi~~~~~~-~----~~a~~~~~~gad~v-~~~~~ 156 (264)
T 1xm3_A 87 LAKASGLCDMIKVEVIGCSR--SLLPDPVETLKASEQLLEE--GFIVLPYTSDD-V----VLARKLEELGVHAI-MPGAS 156 (264)
T ss_dssp HHHHTTCCSSEEECCBCCTT--TCCBCHHHHHHHHHHHHHT--TCCEEEEECSC-H----HHHHHHHHHTCSCB-EECSS
T ss_pred HHHHcCCCCeEEEeecCCCc--ccccchHHHHHHHHHHHCC--CeEEEEEcCCC-H----HHHHHHHHhCCCEE-EECCc
Confidence 8888754433 344421 1124556677777665321 12334 33344 2 34567788999998 44444
No 394
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=63.80 E-value=22 Score=35.54 Aligned_cols=125 Identities=10% Similarity=-0.015 Sum_probs=69.1
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec-CC--CChhHHHHHHHHHHHhcccccccCCccc
Q 007056 73 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF-PA--ASKEDFEAVRTIAKEVGNAVDAESGYVP 149 (620)
Q Consensus 73 ~~~~V~I~DtTLRDG~Qs~g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGf-P~--~s~~d~e~v~~i~~~~~~~~~~~~~l~~ 149 (620)
.++++=|.=-|+||-.+. .+.++ .++.+.++|++.||+.. +. ..+.+.+.++.+.+..+-.+ .
T Consensus 11 ~~~~~g~~~~s~~~~~~~----~~~~~---~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v-------~ 76 (303)
T 3l23_A 11 AGKEIGLQIYSLSQELYK----GDVAA---NLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKI-------I 76 (303)
T ss_dssp -CCCCEEEGGGGGGGGGS----SCHHH---HHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEE-------E
T ss_pred cCCceEEEEEEchhhhcc----CCHHH---HHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeE-------E
Confidence 345566666788885432 35554 45566788999999964 11 12334566666665432211 1
Q ss_pred eEE-ee-----c---------------ccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHH
Q 007056 150 VIC-GL-----S---------------RCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVK 208 (620)
Q Consensus 150 ~i~-~~-----~---------------r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~ 208 (620)
.+. .+ . ....+.++++++..+..|.+.|.+... ...... ...+...+.+.++.+
T Consensus 77 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~~~~----~~~~~~~~~l~~l~~ 151 (303)
T 3l23_A 77 SSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM-PTITTH----DEAKLVCDIFNQASD 151 (303)
T ss_dssp EEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSC-CCCCSH----HHHHHHHHHHHHHHH
T ss_pred EEecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCH----HHHHHHHHHHHHHHH
Confidence 111 11 0 001234566677777789998877421 110000 013456677788889
Q ss_pred HHHHcCCC
Q 007056 209 FARSLGCD 216 (620)
Q Consensus 209 ~a~~~G~~ 216 (620)
+|+++|+.
T Consensus 152 ~a~~~Gv~ 159 (303)
T 3l23_A 152 VIKAEGIA 159 (303)
T ss_dssp HHHHTTCT
T ss_pred HHHHCCCc
Confidence 99999974
No 395
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=63.69 E-value=32 Score=35.95 Aligned_cols=79 Identities=8% Similarity=-0.021 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCCccccC---HHHHHHHHHHHHHhCCCCCceeEEE--ecC
Q 007056 231 KFLYEILGEVIKVGATTLNI-------------------PDTVGITM---PTEFGKLIADIKANTPGIENVVIST--HCQ 286 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L-------------------~DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~--H~H 286 (620)
+.+.+.++.+.++|.|.|-| .|-.|... +.-+.++|+.+++.++. + +|++ .++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-pv~vris~~ 237 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGA--E-RVGVRLAPL 237 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCG--G-GEEEEECSS
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCC--C-cEEEEEccc
Confidence 45556677778899998887 34445443 23466788999988863 2 4555 332
Q ss_pred CC-----cch----HHHHHHHHHHhcCcEEeeccc
Q 007056 287 ND-----LGL----STANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 287 ND-----~Gl----AvANslaAv~aGA~~Vd~Ti~ 312 (620)
+. -|. ++.-+..+.++|++.|+.+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 238 TTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp CCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 21 122 233355566789999998753
No 396
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=63.61 E-value=14 Score=38.14 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||-.+| +.|++..+++++...- |.+.+=.-....+++..++.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~i---------PI~~de~~~~~~~~~~~i~~--- 261 (359)
T 1mdl_A 197 NQSLDVPAAIKRSQALQQEGVTWIEEPTL---QHDYEGHQRIQSKLNV---------PVQMGENWLGPEEMFKALSI--- 261 (359)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCSCEECCSC---TTCHHHHHHHHHTCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHHhCCCeEECCCC---hhhHHHHHHHHHhCCC---------CEEeCCCCCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..++.|.+ +..+---+..+.+++++|+++|+. +..++
T Consensus 262 ~~~d~v~i-------------k~~~~GGi~~~~~i~~~A~~~g~~-~~~~~ 298 (359)
T 1mdl_A 262 GACRLAMP-------------DAMKIGGVTGWIRASALAQQFGIP-MSSHL 298 (359)
T ss_dssp TCCSEECC-------------BTTTTTHHHHHHHHHHHHHHTTCC-BCCBS
T ss_pred CCCCEEee-------------cchhhCCHHHHHHHHHHHHHcCCe-Eeecc
No 397
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=63.28 E-value=18 Score=37.34 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCcc-----------ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
..++.+.+.++...+.|++.|.+.-+-| ...|+++.++++..++. ++++.+|++.+. ..
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i 238 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA-----NTYVMAHAYTGR-----AI 238 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT-----TCCEEEEEEEHH-----HH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC-----CCeEEEEeCChH-----HH
Confidence 3456677777777778887666543322 56889999999988875 366999998542 35
Q ss_pred HHHHHhcCcEEe
Q 007056 297 IAGACAGARQVE 308 (620)
Q Consensus 297 laAv~aGA~~Vd 308 (620)
..++++|++.|+
T Consensus 239 ~~~l~~g~~~i~ 250 (423)
T 3feq_A 239 ARAVRCGVRTIE 250 (423)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHcCCCEEe
Confidence 667788998764
No 398
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=63.20 E-value=29 Score=33.98 Aligned_cols=114 Identities=14% Similarity=0.178 Sum_probs=66.0
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-------C-------
Q 007056 159 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-------D------- 224 (620)
Q Consensus 159 ~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-------d------- 224 (620)
..+++.+++.++.+|.+.|.++..-. + ..+. +.+.+..+.+++.|+..+.+++- +
T Consensus 20 ~~~l~~~l~~~~~~G~~~vEl~~~~~--~-----~~~~----~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~ 88 (290)
T 3tva_A 20 DAGLGVHLEVAQDLKVPTVQVHAPHP--H-----TRTR----EHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTART 88 (290)
T ss_dssp SSSSSBCHHHHHHTTCSEEEEECCCG--G-----GCSH----HHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCCC--C-----cCCH----HHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccc
Confidence 45556666667778999999876421 1 1232 23556677788899863333220 0
Q ss_pred -CC------CCCHHHHHHHHHHHHHcCCcEEeecCCcccc---CHHHHHHHHHHHHHh---CCCCCceeEEEecC
Q 007056 225 -AG------RSDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKAN---TPGIENVVISTHCQ 286 (620)
Q Consensus 225 -~~------r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~---~P~~v~~li~~l~~~---~~~~~~v~i~~H~H 286 (620)
++ +...+++.+.++.+.+.|+..|.+. .|.. .+.....+++.+++- ... .++.|.+|.|
T Consensus 89 ~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~ 160 (290)
T 3tva_A 89 VGLVPLETRASRVAEMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAAN-HGQAVHLETG 160 (290)
T ss_dssp SSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHT-TTCEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHH-cCCEEEEecC
Confidence 00 1124678888888999999998873 1211 334444444444332 111 1478888888
No 399
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=63.20 E-value=69 Score=33.35 Aligned_cols=141 Identities=11% Similarity=0.041 Sum_probs=70.6
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHcC--CCEEEEcCCC------CCCCC
Q 007056 162 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLG--CDDVEFSPED------AGRSD 229 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~a~~~G--~~~V~f~~ed------~~r~d 229 (620)
++++++.....|.+.|.+....... ......+ .+...+.+.++.++|++.| +. +.+-+.. ..-.+
T Consensus 118 ~~~~i~~A~~LGa~~vvv~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t 194 (394)
T 1xla_A 118 VLHNIDLAAEMGAETFVMWGGREGS--EYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLR-IALEPKPNEPRGDIFLPT 194 (394)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCS
T ss_pred HHHHHHHHHHhCCCEEEECCCCCcc--ccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecCCCCCCccccCCC
Confidence 4455666667799988765332100 0000122 3455666777788888999 53 5553321 12246
Q ss_pred HHHHHHHHHHHHHcCCc-EEee-cCCcc----ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc
Q 007056 230 RKFLYEILGEVIKVGAT-TLNI-PDTVG----ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 303 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~-~I~L-~DTvG----~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG 303 (620)
.+.+.++++. .+-. .+.+ .||.= ...|. +.+..+.. .+ -...+|.+|..|.
T Consensus 195 ~~~~~~li~~---v~~pn~vgl~lD~~H~~~~g~d~~---~~i~~~~~-~~----rI~~vHl~D~~g~------------ 251 (394)
T 1xla_A 195 VGHGLAFIEQ---LEHGDIVGLNPETGHEQMAGLNFT---HGIAQALW-AE----KLFHIDLNGQRGI------------ 251 (394)
T ss_dssp HHHHHHHHTT---CTTGGGEEECCBHHHHHTTTCCHH---HHHHHHHH-TT----CBCCCEECBCCSS------------
T ss_pred HHHHHHHHHH---hCCCCceEEEEecCcccccCCCHH---HHHHHHhc-cC----ceeEEEecCCCCC------------
Confidence 6777776654 4443 2433 36621 12333 22332221 11 2357888885331
Q ss_pred CcEEeeccccccCCcCcc-cHHHHHHHHHhc
Q 007056 304 ARQVEVTINGIGERAGNA-SLEEVVMAFKCR 333 (620)
Q Consensus 304 A~~Vd~Ti~GlGERaGNa-~lEevv~~L~~~ 333 (620)
+ .|. -.-+| .|+. +...++..|+..
T Consensus 252 -~-~d~-~~~~G--~G~i~~~~~~~~~L~~~ 277 (394)
T 1xla_A 252 -K-YDQ-DLVFG--HGDLTSAFFTVDLLENG 277 (394)
T ss_dssp -S-SCC-CBCTT--SSCHHHHHHHHHHHHHC
T ss_pred -C-CCC-CCCCC--CCcHHHHHHHHHHHHHh
Confidence 0 010 01133 3676 677888888876
No 400
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=63.20 E-value=88 Score=32.28 Aligned_cols=72 Identities=17% Similarity=0.140 Sum_probs=37.7
Q ss_pred HHHHHHHhHcCCCEEEEecC---CCChhHHH-----HHHHHHHHhc-ccccccCC--ccceEEeecccchhhHHHHHHHH
Q 007056 101 LDIARQLAKLGVDIIEAGFP---AASKEDFE-----AVRTIAKEVG-NAVDAESG--YVPVICGLSRCNERDIKTAWEAV 169 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGfP---~~s~~d~e-----~v~~i~~~~~-~~~~~~~~--l~~~i~~~~r~~~~dI~~a~eal 169 (620)
+++++.+.++|++.|.+.-+ .-||++|+ ..++|.+.+. ...+ .| -++. .-++.... ..++.+
T Consensus 200 ~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~--~g~~~~p~-i~~~~G~~----~~l~~l 272 (367)
T 1r3s_A 200 VPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE--AGLAPVPM-IIFAKDGH----FALEEL 272 (367)
T ss_dssp HHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHH--TTCCCCCE-EEEETTCG----GGHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhcc--ccCCCCCe-EEEcCCcH----HHHHHH
Confidence 34455666899999988643 34677653 4555655443 1000 00 0132 23333222 234556
Q ss_pred hcCCCCEEEE
Q 007056 170 KYAKRPRIHT 179 (620)
Q Consensus 170 ~~ag~~~v~i 179 (620)
.+.|++.+++
T Consensus 273 ~~~g~d~i~~ 282 (367)
T 1r3s_A 273 AQAGYEVVGL 282 (367)
T ss_dssp TTSSCSEEEC
T ss_pred HhcCCCEEEe
Confidence 6778887765
No 401
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=63.07 E-value=20 Score=36.17 Aligned_cols=100 Identities=8% Similarity=-0.032 Sum_probs=65.2
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH
Q 007056 169 VKYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIK 242 (620)
Q Consensus 169 l~~ag~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~ 242 (620)
+..+|++.| + +..|- -+ ..+ ..|.+|++..++..++-++. ..|..+.+.++..+++.+.+-+.++.+
T Consensus 45 ~e~aG~d~i-l-vGdSl-~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~---~~vvaD~pfgsY~s~~~a~~~a~rl~k 117 (275)
T 3vav_A 45 LDRANVDVQ-L-IGDSL-GN-VLQGQTTTLPVTLDDIAYHTACVARAQPR---ALIVADLPFGTYGTPADAFASAVKLMR 117 (275)
T ss_dssp HHHTTCSEE-E-ECTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCS---SEEEEECCTTSCSSHHHHHHHHHHHHH
T ss_pred HHHcCCCEE-E-ECcHH-HH-HHcCCCCCCccCHHHHHHHHHHHHhcCCC---CCEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 345799987 3 22232 12 233 35778777765544442211 136778877544899999999999999
Q ss_pred cCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecC
Q 007056 243 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 286 (620)
Q Consensus 243 aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H 286 (620)
+||+.|.|-|.. +..+.|+.|.+. .+++--|.=
T Consensus 118 aGa~aVklEdg~------~~~~~i~~l~~~-----GIpv~gHlg 150 (275)
T 3vav_A 118 AGAQMVKFEGGE------WLAETVRFLVER-----AVPVCAHVG 150 (275)
T ss_dssp TTCSEEEEECCG------GGHHHHHHHHHT-----TCCEEEEEE
T ss_pred cCCCEEEECCch------hHHHHHHHHHHC-----CCCEEEecC
Confidence 999999999974 456677777764 255666643
No 402
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=62.88 E-value=28 Score=35.85 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCcEEeecCCccc-cCHHHHHHHH----HHHHHhCCCC---CceeEEEecCCCcchHHHHHHHHHHhcC
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGI-TMPTEFGKLI----ADIKANTPGI---ENVVISTHCQNDLGLSTANTIAGACAGA 304 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~-~~P~~v~~li----~~l~~~~~~~---~~v~i~~H~HND~GlAvANslaAv~aGA 304 (620)
+.+.+++.+++|++.|.+.|+.+. +.|..+.+++ +.+.+.+... +++++-.||.+. +. .-..+ .+.|+
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-~~-~l~~l--~~~g~ 264 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-GQ-WLEAM--AETGC 264 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-TT-THHHH--HTTSC
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-HH-HHHHH--HhcCC
Confidence 344556667889999999987654 5577776654 3344444321 036676777665 21 11122 26799
Q ss_pred cEEeeccccccCCcCcccHHHHHHHH
Q 007056 305 RQVEVTINGIGERAGNASLEEVVMAF 330 (620)
Q Consensus 305 ~~Vd~Ti~GlGERaGNa~lEevv~~L 330 (620)
+.++.- . ..+++++...+
T Consensus 265 d~i~~d-----~---~~dl~~~~~~~ 282 (354)
T 3cyv_A 265 DALGLD-----W---TTDIADARRRV 282 (354)
T ss_dssp SEEECC-----T---TSCHHHHHHHH
T ss_pred CEEEeC-----C---CCCHHHHHHHh
Confidence 988742 1 35777765444
No 403
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=62.71 E-value=44 Score=32.10 Aligned_cols=113 Identities=12% Similarity=0.009 Sum_probs=64.0
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCH-------H
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAGRSDR-------K 231 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~-ed~~r~d~-------e 231 (620)
.+++..++.++.+|.+.|.++.. ++. + ..+.+..+.+++.|++...+++ .+....++ +
T Consensus 18 ~~~~~~l~~~~~~G~~~vEl~~~--~~~---------~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~ 83 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAIAPWRD--QVA---------A---IGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAID 83 (275)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHH--HHH---------H---HCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeccc--ccc---------c---cCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHH
Confidence 46777778888889999987642 110 1 2345666777888875222221 12222233 6
Q ss_pred HHHHHHHHHHHcCCcEEeecCCcccc-----CH-HHHHHHHHHHHHhCC--CCCceeEEEecCCC
Q 007056 232 FLYEILGEVIKVGATTLNIPDTVGIT-----MP-TEFGKLIADIKANTP--GIENVVISTHCQND 288 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTvG~~-----~P-~~v~~li~~l~~~~~--~~~~v~i~~H~HND 288 (620)
.+.+.++.+.++|+..|.+. .|.. .+ .....+++.+++-.+ ...++.|.+|.|+.
T Consensus 84 ~~~~~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~ 146 (275)
T 3qc0_A 84 DNRRAVDEAAELGADCLVLV--AGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHP 146 (275)
T ss_dssp HHHHHHHHHHHTTCSCEEEE--CBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEe--eCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCC
Confidence 78888888999999988775 2222 22 233333333332110 00136789888764
No 404
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=62.66 E-value=1.2e+02 Score=29.72 Aligned_cols=115 Identities=6% Similarity=-0.087 Sum_probs=69.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC-CC---CCC---CHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DA---GRS---DRKF 232 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e-d~---~r~---d~e~ 232 (620)
.+++..++.++.+|.+.|.++.. +......... .+.+..+.+++.|++.+.+++. +. ... ..++
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~--~~~~~~~~~~-------~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 106 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAE--NYVDALAAGL-------TDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKK 106 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHH--HHHHHHHTTC-------CHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHH--HHHHHHhcCC-------cHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHH
Confidence 46777788888889999998753 1110000112 2345566778899863333331 11 111 1357
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCC
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 287 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN 287 (620)
+.+.++.+.+.|+..|.+.-. +......+.+.++.+.+... ++.|.+|.|+
T Consensus 107 ~~~~i~~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~---Gv~l~lE~~~ 157 (296)
T 2g0w_A 107 EQTTFHMARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAE---ELIIGLEFMP 157 (296)
T ss_dssp HHHHHHHHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHT---TSEEEEECCT
T ss_pred HHHHHHHHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhc---CCEEEEEecC
Confidence 788899999999999887422 22233455555555555442 5889999996
No 405
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=62.63 E-value=33 Score=35.41 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=73.9
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEE-eec-CCccccCHHHHHHHHHHHHHhCCCCCcee
Q 007056 203 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP-DTVGITMPTEFGKLIADIKANTPGIENVV 280 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I-~L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~ 280 (620)
..++++.|++.|+-.-.|+. .+.+.+..+++++.+.+...| -+. .+..++-...+..++..+.+.++ ++|
T Consensus 6 ~~~ll~~A~~~~yAV~AfNv-----~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~---~VP 77 (323)
T 2isw_A 6 LRQMLGEARKHKYGVGAFNV-----NNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHP---DIP 77 (323)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCT---TSC
T ss_pred HHHHHHHHHHCCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcC---CCc
Confidence 35778899999986346776 677999999999999987644 332 22334445667778888877744 377
Q ss_pred EEEecCCCcchHHHHHHHHHHhcCcE--Eeecccccc
Q 007056 281 ISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIG 315 (620)
Q Consensus 281 i~~H~HND~GlAvANslaAv~aGA~~--Vd~Ti~GlG 315 (620)
+.+|. |-|....-...|+++|.+- +|+|-..+-
T Consensus 78 ValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~e 112 (323)
T 2isw_A 78 ICIHL--DHGDTLESVKMAIDLGFSSVMIDASHHPFD 112 (323)
T ss_dssp EEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHH
T ss_pred EEEEC--CCCCCHHHHHHHHHcCCCeEEecCCCCCHH
Confidence 88665 5566677799999999976 688866543
No 406
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=62.52 E-value=25 Score=36.53 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.++|+++||=-+| +.|++..+++++..+- |...+=.-....+++..++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 257 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAEELCP---ADDVLSRRRLVGQLDM---------PFIADESVPTPADVTREVLG--- 257 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEESCSC---TTSHHHHHHHHHHCSS---------CEEECTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEECCCC---cccHHHHHHHHHhCCC---------CEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
...+.|.+ +.++- -+..+.++++.|+++|+. +..+....+
T Consensus 258 ~~~d~v~~-------------k~~~~-Git~~~~ia~~A~~~gi~-~~~~~~~es 297 (367)
T 3dg3_A 258 GSATAISI-------------KTART-GFTGSTRVHHLAEGLGLD-MVMGNQIDG 297 (367)
T ss_dssp TSCSEEEE-------------CHHHH-TTHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEe-------------ehhhh-hHHHHHHHHHHHHHcCCe-EEECCcCCc
No 407
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=62.48 E-value=1.1e+02 Score=30.03 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=67.2
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCC--CCCCC--------
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED--AGRSD-------- 229 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed--~~r~d-------- 229 (620)
+++.+++.++..|.+.|.++........ ....+ + +.+.+..+.+++.|+..+.. .+.. -...+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~--~~~~~-~---~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~ 92 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTK--RKSIE-E---LNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLG 92 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCC--CCCSG-G---GCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccC--CCCCC-H---HHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHH
Confidence 5677777777789999888643210000 00011 1 12344556677788743433 3321 11123
Q ss_pred HHHHHHHHHHHHHcCCcEEeec-CC-ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCc
Q 007056 230 RKFLYEILGEVIKVGATTLNIP-DT-VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL 289 (620)
Q Consensus 230 ~e~l~~~~~~~~~aGa~~I~L~-DT-vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~ 289 (620)
.+++.+.++.+.+.|+..|++. -. .+......+..+++.+++-.....++.|.++.|++.
T Consensus 93 ~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~ 154 (303)
T 3aal_A 93 VDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGK 154 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4567777888888899888763 11 121223445566666666432213588999988743
No 408
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=62.44 E-value=95 Score=31.42 Aligned_cols=205 Identities=16% Similarity=0.057 Sum_probs=114.5
Q ss_pred HHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEEe----ecccchhhHHHHH
Q 007056 104 ARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTAW 166 (620)
Q Consensus 104 a~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a~ 166 (620)
++.++++||+.|=+|. |...+ +....++.|++... .|.++- |+ ....+-+..
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~---------~PviaD~d~Gyg--~~~~~~~~v 96 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS---------IPLIADIDTGFG--NAVNVHYVV 96 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS---------SCEEEECTTTTS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHHHH
Confidence 6777889999998872 32222 12345555554321 133322 22 344444444
Q ss_pred HHHhcCCCCEEEEEecCCH---HHHH--HHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC--CCCCHHHHHHHHHH
Q 007056 167 EAVKYAKRPRIHTFIATSG---IHME--HKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--GRSDRKFLYEILGE 239 (620)
Q Consensus 167 eal~~ag~~~v~i~~~~Sd---~h~~--~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~--~r~d~e~l~~~~~~ 239 (620)
..+..+|+..|++-...++ -|+. .+-=.+.++..+++..+++....-++. |.--. |+ .....+.+++-+++
T Consensus 97 ~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~-i~aRt-da~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 97 PQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFV-VIARV-EALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSE-EEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcE-EEEee-hHhhccccHHHHHHHHHH
Confidence 4455579999999877653 1332 111135667677666555543332331 22211 22 12347888889999
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcEEeeccccccCCc
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQVEVTINGIGERA 318 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~Vd~Ti~GlGERa 318 (620)
..++|||.|.+.=. .-.|+++.++.+.+... +|+-+.+-.--.+ ..-.--+.| +++|-..... -|+
T Consensus 175 y~eAGAd~i~~e~~--~~~~~~~~~i~~~~~~~------vP~i~n~~~~~~~---~~~eL~~lG~v~~v~~~~~~--~ra 241 (290)
T 2hjp_A 175 YEEAGADAILIHSR--QKTPDEILAFVKSWPGK------VPLVLVPTAYPQL---TEADIAALSKVGIVIYGNHA--IRA 241 (290)
T ss_dssp HHHTTCSEEEECCC--CSSSHHHHHHHHHCCCS------SCEEECGGGCTTS---CHHHHHTCTTEEEEEECSHH--HHH
T ss_pred HHHcCCcEEEeCCC--CCCHHHHHHHHHHcCCC------CCEEEeccCCCCC---CHHHHHhcCCeeEEEechHH--HHH
Confidence 99999999997531 24467776665554321 4454432200112 233445568 8887554443 378
Q ss_pred CcccHHHHHHHHHhcc
Q 007056 319 GNASLEEVVMAFKCRG 334 (620)
Q Consensus 319 GNa~lEevv~~L~~~~ 334 (620)
-+.++++++..|...|
T Consensus 242 a~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 242 AVGAVREVFARIRRDG 257 (290)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8888888888888755
No 409
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=62.39 E-value=1.5e+02 Score=30.86 Aligned_cols=200 Identities=15% Similarity=0.087 Sum_probs=114.3
Q ss_pred ccCCCCCC--CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh---------hH-------HHHHHHHHHHhcccccccCCc
Q 007056 86 DGEQSPGA--TLTSKEKLDIARQLAKLGVDIIEAGFPAASK---------ED-------FEAVRTIAKEVGNAVDAESGY 147 (620)
Q Consensus 86 DG~Qs~g~--~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---------~d-------~e~v~~i~~~~~~~~~~~~~l 147 (620)
.+.++-+. ..+.+.-..+++.-.+++-+.|=-.+|.... .. ...++.+++...
T Consensus 29 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~~--------- 99 (357)
T 3qm3_A 29 AEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYG--------- 99 (357)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHT---------
T ss_pred HcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHCC---------
Confidence 34444432 4678999999999999999866433332100 00 122445554321
Q ss_pred cceEEeecccch---hhHHHHHHHH-------hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE
Q 007056 148 VPVICGLSRCNE---RDIKTAWEAV-------KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD 217 (620)
Q Consensus 148 ~~~i~~~~r~~~---~dI~~a~eal-------~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~ 217 (620)
+|...=+-.+.. +.++.++++. ..+|...|.+ .. | ..+.||+++..++.+++|+..|+.
T Consensus 100 VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMi-Dg-S--------~lp~eENI~~Tk~vv~~ah~~gvs- 168 (357)
T 3qm3_A 100 VPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHML-DL-S--------EESLEENLSTCEVYLQKLDALGVA- 168 (357)
T ss_dssp CEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEC-CC-T--------TSCHHHHHHHHHHHHHHHHHHTCE-
T ss_pred CcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEE-eC-C--------CCCHHHHHHHHHHHHHHHHHcCCe-
Confidence 344444444433 3456666543 1356777643 32 2 247899999999999999999874
Q ss_pred EEE------cCCC----------CCCCCHHHHHHHHHHHHHc-CCcEEeec--CCccc-------cCHHHHHHHHHHHHH
Q 007056 218 VEF------SPED----------AGRSDRKFLYEILGEVIKV-GATTLNIP--DTVGI-------TMPTEFGKLIADIKA 271 (620)
Q Consensus 218 V~f------~~ed----------~~r~d~e~l~~~~~~~~~a-Ga~~I~L~--DTvG~-------~~P~~v~~li~~l~~ 271 (620)
|+- +-|| ...|+|+.+.+++++.-.. |+|.+-++ -.=|. +.|+...++-+.+++
T Consensus 169 VEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~ 248 (357)
T 3qm3_A 169 LEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKD 248 (357)
T ss_dssp EEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHH
T ss_pred EEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 542 2222 2368999998888764211 34444332 11122 245666666666766
Q ss_pred hC--CCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 272 NT--PGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 272 ~~--~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+ ++..++||-+|+=. |.....-..|+..|+.-|
T Consensus 249 ~~~~~~~~~vpLVlHGgS--G~p~e~i~~ai~~GV~Ki 284 (357)
T 3qm3_A 249 KFALNSDKPINFVFHGGS--GSELKDIKNAVSYGVIKM 284 (357)
T ss_dssp HTTCSCSCCSCEEECSCT--TCCHHHHHHHHHTTEEEE
T ss_pred HhccccCCCCcEEEeCCC--CCCHHHHHHHHHCCceEE
Confidence 54 21113778888643 555666666666665554
No 410
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=62.38 E-value=26 Score=36.56 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|+ .||-.+| |++..+++++...- |.+.+=.-....+++..++.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE~P~~-----~~~~~~~l~~~~~i---------PI~~de~i~~~~~~~~~i~~--- 258 (379)
T 2rdx_A 197 NQGWRVDNAIRLARATRDLDY-ILEQPCR-----SYEECQQVRRVADQ---------PMKLDECVTGLHMAQRIVAD--- 258 (379)
T ss_dssp TTCSCHHHHHHHHHHTTTSCC-EEECCSS-----SHHHHHHHHTTCCS---------CEEECTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhCCe-EEeCCcC-----CHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
..++.|.+ +..+---+..+.++++.|+++|+. +..++...+
T Consensus 259 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 299 (379)
T 2rdx_A 259 RGAEICCL-------------KISNLGGLSKARRTRDFLIDNRMP-VVAEDSWGG 299 (379)
T ss_dssp TCCSEEEE-------------ETTTTTSHHHHHHHHHHHHHTTCC-EEEECSBCS
T ss_pred CCCCEEEE-------------eccccCCHHHHHHHHHHHHHcCCe-EEEeeccCc
No 411
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=62.10 E-value=36 Score=35.15 Aligned_cols=106 Identities=15% Similarity=0.253 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhH--cCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHH
Q 007056 92 GATLTSKEKLDIARQLAK--LGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 169 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~--~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal 169 (620)
+..++.++-+++++.|.+ .|++.||=.+| +.|++..+++.+...- |.+.+=.-.+..+++..++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~i~~- 259 (366)
T 1tkk_A 193 NQGWRPKEAVTAIRKMEDAGLGIELVEQPVH---KDDLAGLKKVTDATDT---------PIMADESVFTPRQAFEVLQT- 259 (366)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEEEECCSC---TTCHHHHHHHHHHCSS---------CEEECTTCCSHHHHHHHHHH-
T ss_pred CCCCCHHHHHHHHHHHhhcCCCceEEECCCC---cccHHHHHHHHhhCCC---------CEEEcCCCCCHHHHHHHHHh-
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 170 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 170 ~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
...+.|.+ +..+---+..+.++++.|+++|+. +..+....+
T Consensus 260 --~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 300 (366)
T 1tkk_A 260 --RSADLINI-------------KLMKAGGISGAEKINAMAEACGVE-CMVGSMIET 300 (366)
T ss_dssp --TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCC-EEECCSSCC
T ss_pred --CCCCEEEe-------------ehhhhcCHHHHHHHHHHHHHcCCc-EEecCcccc
No 412
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=62.10 E-value=52 Score=32.18 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=105.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..|-.+-...|-+.+.+.|++.+-.-.......+.+.++.+... .+. | +..+. ....+ +..++.+..
T Consensus 27 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iI~~~-~~~~~-~~~~~~l~~- 93 (303)
T 3kke_A 27 NAVFADMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEG---RVD---G----VLLQR-REDFD-DDMLAAVLE- 93 (303)
T ss_dssp STTHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSC---SSS---E----EEECC-CTTCC-HHHHHHHHT-
T ss_pred ChHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhC---CCc---E----EEEec-CCCCc-HHHHHHHhC-
Confidence 34667777888889999999887553332223334555554432 111 1 21111 11111 113455566
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
+++.|.+-....+ .......+ +.+....+++++.++|...+.| +.........+.+.-+.+++.+.|...-...
T Consensus 94 ~iPvV~i~~~~~~--~~~~V~~D---~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~ 168 (303)
T 3kke_A 94 GVPAVTINSRVPG--RVGSVILD---DQKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLETLASAGLRSEAAW 168 (303)
T ss_dssp TSCEEEESCCCTT--CCCEEEEC---HHHHHHHHHHHHHHTTCCSEEEEESCSSCHHHHHHHHHHHHHHHHTTCCCCGGG
T ss_pred CCCEEEECCcCCC--CCCEEEEC---cHHHHHHHHHHHHHCCCCeEEEEeCCCcCccHHHHHHHHHHHHHHcCCCCCcce
Confidence 8887765333221 00111222 3455667888888899876665 3222223334666667777888886421000
Q ss_pred CCccccCHHHHHHHHHHH-----HHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 252 DTVGITMPTEFGKLIADI-----KANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 252 DTvG~~~P~~v~~li~~l-----~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
-..|-..++..++.+..+ .+..|..+ .+=|.||. +|+.-..++-+.|-+. =|.+|.|++
T Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~----ai~~~nd~-~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 169 VVDAGWEADAGSAALNTLYRGANLGKPDGPT----AVVVASVN-AAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHCTTSTTSCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred EEecCCChHHHHHHHHHhcchhhhcCCCCCc----EEEECCHH-HHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 012345677777777766 44444322 44477764 4444444455778653 267777765
No 413
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=61.44 E-value=35 Score=34.59 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=58.4
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHH
Q 007056 168 AVKYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEV 240 (620)
Q Consensus 168 al~~ag~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r-~d~e~l~~~~~~~ 240 (620)
.+..+|++.|- +..|- -+ ..+ ..|.+|++..+....+-++ ...|..+.+.++. .+++...+-+.++
T Consensus 49 l~e~aG~d~il--vGdSl-~~-~~lG~~dt~~vTldemi~h~~aV~r~~~---~~~vvaD~pfgsy~~s~~~a~~na~rl 121 (281)
T 1oy0_A 49 IFDEAGIPVLL--VGDSA-AN-VVYGYDTTVPISIDELIPLVRGVVRGAP---HALVVADLPFGSYEAGPTAALAAATRF 121 (281)
T ss_dssp HHHTTTCCEEE--ECTTH-HH-HTTCCSSSSSCCGGGTHHHHHHHHHHCT---TSEEEEECCTTSSTTCHHHHHHHHHHH
T ss_pred HHHHcCCCEEE--ECHHH-HH-HHcCCCCCCCCCHHHHHHHHHHHHhcCC---CCeEEEECCCCcccCCHHHHHHHHHHH
Confidence 34457888763 33232 22 233 3568887776655444332 2235567766555 4788888866666
Q ss_pred HH-cCCcEEeecCCccccCHHHHHHHHHHHHHh
Q 007056 241 IK-VGATTLNIPDTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 241 ~~-aGa~~I~L~DTvG~~~P~~v~~li~~l~~~ 272 (620)
.+ +||+.|.|-|. .++.+.|+.+.+.
T Consensus 122 ~~eaGa~aVklEdg------~e~~~~I~al~~a 148 (281)
T 1oy0_A 122 LKDGGAHAVKLEGG------ERVAEQIACLTAA 148 (281)
T ss_dssp HHTTCCSEEEEEBS------GGGHHHHHHHHHH
T ss_pred HHHhCCeEEEECCc------HHHHHHHHHHHHC
Confidence 65 99999999997 3677788888765
No 414
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=61.14 E-value=39 Score=35.06 Aligned_cols=131 Identities=12% Similarity=0.056 Sum_probs=79.3
Q ss_pred HhcCCCCEEEEEec--------CCH--HHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---EEEEcCCCC--CCCCHHH
Q 007056 169 VKYAKRPRIHTFIA--------TSG--IHMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDRKF 232 (620)
Q Consensus 169 l~~ag~~~v~i~~~--------~Sd--~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~---~V~f~~ed~--~r~d~e~ 232 (620)
.+.+|.+.|.|-.+ .|+ .++...+|-+.+.-.+.+.+.|+.+|+. |-+ .|.+++.|. ...+.+.
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 45579998887643 122 1233345667888888888888888876 312 256677532 2356788
Q ss_pred HHHHHHHHHHcCCcEEeecC--Cccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhc-CcE
Q 007056 233 LYEILGEVIKVGATTLNIPD--TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQ 306 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~D--TvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~ 306 (620)
..++++.+.++ +|.|.+.. +... ..|....++++.+++.++ ++|..=.-- .-...+..+++.| ||.
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN----IKTSAVGLI---TTQELAEEILSNERADL 303 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CEEEEESSC---CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC----cccceeeee---eHHHHHHHHHhchhhHH
Confidence 88999999999 99988841 1110 122223456777777663 444332211 0144566778887 675
Q ss_pred E
Q 007056 307 V 307 (620)
Q Consensus 307 V 307 (620)
|
T Consensus 304 V 304 (343)
T 3kru_A 304 V 304 (343)
T ss_dssp E
T ss_pred H
Confidence 5
No 415
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=60.80 E-value=1.4e+02 Score=31.59 Aligned_cols=199 Identities=15% Similarity=0.061 Sum_probs=102.5
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-EEEEcCCCCCCCCHHHHHHHHHHHHHcC
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPEDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~-~V~f~~ed~~r~d~e~l~~~~~~~~~aG 244 (620)
++++.+.|+|.+-+-.- ++ +..++.+++.+++.|+. .+.|+.++.++.+-.-+.+++..+.+.|
T Consensus 145 i~~L~~~GvDlll~ETi-~~--------------~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~ 209 (406)
T 1lt8_A 145 LEVFMKKNVDFLIAEYF-EH--------------VEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAG 209 (406)
T ss_dssp HHHHHHHTCSEEEECCC-SC--------------HHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHHHTTT
T ss_pred HHHHhhCCCCEEEEccc-CC--------------HHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHhhcCC
Confidence 45666779998755332 21 23344456667777765 3566664333333344556666666677
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCC--CCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCc--
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN-- 320 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGN-- 320 (620)
++.|.+-= ..-|+.+..+++.+++... +. +.+|+++.-. .++- ..| -++.+....+
T Consensus 210 ~~avGvNC---~~gP~~~~~~l~~l~~~~~~~g~-~~pl~vyPNa-g~~~--------~~~-------~~~~~~~~~~~~ 269 (406)
T 1lt8_A 210 ASIIGVNC---HFDPTISLKTVKLMKEGLEAAQL-KAHLMSQPLA-YHTP--------DAN-------KQGFIDLPEFPF 269 (406)
T ss_dssp CSEEEEES---SSCHHHHHHHHHHHHHHHHTTTC-CCEEEEECCS-BCCT--------TCC-------TTCGGGSTTTTT
T ss_pred CCEEEecC---CCCHHHHHHHHHHHHHhhhhcCC-CccEEEecCC-CCCC--------cCC-------cccccCCccccc
Confidence 66544321 1349999999999986531 11 3578777643 1100 000 0111110000
Q ss_pred ---c------cHHHHHHHHHhccccccCccccCCChhhHHHHHHHHHHHhCCCCCCCCcccCccceeeeccccccc----
Q 007056 321 ---A------SLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDG---- 387 (620)
Q Consensus 321 ---a------~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~v~~~~pivG~naF~h~sGiH~dg---- 387 (620)
. ++.+.+......|-..+.| ..|...++|..+++.+....+...+.. ..-+..=||....-
T Consensus 270 ~~~p~~~~~~~~~~~a~~w~~~Ga~iIGG-CCGTtPeHI~aia~~l~~~~~~~~~~~-----~~~~~~~sGLe~l~~~~~ 343 (406)
T 1lt8_A 270 GLEPRVATRWDIQKYAREAYNLGVRYIGG-CCGFEPYHIRAIAEELAPERGFLPPAS-----EKHGSWGSGLDMHTKPWV 343 (406)
T ss_dssp SCGGGBCCHHHHHHHHHHHHHHTEEEECC-CTTCCHHHHHHHHHHTHHHHSCCCGGG-----GGSCSTTGGGGGCSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCeEEEE-ecCCCHHHHHHHHHHHhccCCCCCCCc-----cCCCCCCccccccCChHH
Confidence 0 2444444333333233434 477889999999999988765422222 12233445543331
Q ss_pred -cccCCccccccCCcccCCc
Q 007056 388 -MLKHKGTYEIISPEDIGLE 406 (620)
Q Consensus 388 -i~k~~~~Ye~i~Pe~vG~~ 406 (620)
....+..+|-+.|.. |+.
T Consensus 344 ~~~~~~~~~~~~~~~~-~~~ 362 (406)
T 1lt8_A 344 RARARKEYWENLRIAS-GRP 362 (406)
T ss_dssp HTTCCHHHHHHCCCCC-SCT
T ss_pred HHHhHHHHHhcCCCcC-CCC
Confidence 111234567777765 543
No 416
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=60.77 E-value=1.3e+02 Score=29.73 Aligned_cols=202 Identities=12% Similarity=0.044 Sum_probs=106.6
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..|-.+-...+-+.+.+.|++.+-.........+.+.++.+... .+. | |..+.... .+ +...+.+...
T Consensus 75 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iIi~~~~~-~~-~~~~~~~~~~ 142 (338)
T 3dbi_A 75 GIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDL---RCD---A----IMIYPRFL-SV-DEIDDIIDAH 142 (338)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHT---TCS---E----EEECCSSS-CH-HHHHHHHHHC
T ss_pred ChhHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhC---CCC---E----EEEeCCCC-Ch-HHHHHHHHcC
Confidence 34566777788888999999766554222222334556655542 111 1 22222111 11 2223334456
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
+++.|.+-....+... .....+ +.+....+++++.++|...+.| +.........+.+.-+.+++.+.|...-...
T Consensus 143 ~iPvV~~~~~~~~~~~-~~V~~D---~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~ 218 (338)
T 3dbi_A 143 SQPIMVLNRRLRKNSS-HSVWCD---HKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKL 218 (338)
T ss_dssp SSCEEEESSCCSSSGG-GEECBC---HHHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGG
T ss_pred CCCEEEEcCCCCCCCC-CEEEEC---hHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcce
Confidence 7887655322211110 112333 3345667788888899876666 3322222334566667777778885421100
Q ss_pred CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 252 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 252 DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
--.|-..++.-++.+..+.+..+..+ .+=|.||. +|+.-..++-++|.+. =|.+|.|++
T Consensus 219 ~~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nd~-~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 219 IANGKWTPASGAEGVEMLLERGAKFS----ALVASNDD-MAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCCCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred EEeCCCCHHHHHHHHHHHHcCCCCCe----EEEECChH-HHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 01244567777788877776555432 44477763 4554444555678653 256777765
No 417
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=60.76 E-value=34 Score=35.83 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|+.+||=-+| +.|++..+++++...- |...+=.-....|+...++.
T Consensus 202 N~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~~~~--- 266 (382)
T 3dgb_A 202 NQAWDEAVALRACRILGGNGIDLIEQPIS---RNNRAGMVRLNASSPA---------PIMADESIECVEDAFNLARE--- 266 (382)
T ss_dssp TTCBCHHHHHHHHHHHHTTTCCCEECCBC---TTCHHHHHHHHHHCSS---------CEEESTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHhhcCcCeeeCCCC---ccCHHHHHHHHHhCCC---------CEEeCCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +..++...+
T Consensus 267 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~~es 307 (382)
T 3dgb_A 267 GAASVFAL-------------KIAKNGGPRATLRTAAIAEAAGIG-LYGGTMLEG 307 (382)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECCSCCC
T ss_pred CCCCEEEe-------------cccccCCHHHHHHHHHHHHHcCCe-EeecCCCcc
No 418
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=60.72 E-value=1.3e+02 Score=29.72 Aligned_cols=201 Identities=11% Similarity=0.037 Sum_probs=102.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
.|-.+-...+-+.+.+.|++.+-... ...+ .+.+.++.+...-+ .+ ..|.... .........++.+...
T Consensus 18 ~~~~~~~~gi~~~a~~~g~~l~~~~~-~~~~~~~~~~i~~l~~~~~-~v-------dgiIi~~-~~~~~~~~~~~~~~~~ 87 (332)
T 2rjo_A 18 PYYTAFNKGAQSFAKSVGLPYVPLTT-EGSSEKGIADIRALLQKTG-GN-------LVLNVDP-NDSADARVIVEACSKA 87 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEC-TTCHHHHHHHHHHHHHHTT-TC-------EEEEECC-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEecC-CCCHHHHHHHHHHHHHCCC-CC-------CEEEEeC-CCHHHHHHHHHHHHHC
Confidence 34456666777788889998765432 2222 23455666554310 01 1122221 2222333334444445
Q ss_pred CCCEEEEEecCCHH-------HHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCEEEE-cCCCCCCCCHHHHHHHHHHHHH
Q 007056 173 KRPRIHTFIATSGI-------HMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEF-SPEDAGRSDRKFLYEILGEVIK 242 (620)
Q Consensus 173 g~~~v~i~~~~Sd~-------h~~~~l~~t~ee~l~~~~~~v~~a~~--~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~ 242 (620)
+++.|.+-....+. ........+. .+....+++++.+ .|...|.| ..........+.+.-+.+++.+
T Consensus 88 ~iPvV~~~~~~~~~~~~~~~~~~~~~V~~D~---~~~g~~a~~~L~~~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~ 164 (332)
T 2rjo_A 88 GAYVTTIWNKPKDLHPWDYNPNYVAHLSYDG---VAYGEETATQLFKSMGGKGGVVALGGIFSNVPAIERKAGLDAALKK 164 (332)
T ss_dssp TCEEEEESCCCTTCCGGGGTTTEEEEEECCH---HHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCcccchhcccceeEEEccCh---HHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHHHHHHHHHHHHHh
Confidence 77766543222110 0000122332 3455667788877 68766655 3221222234555556666767
Q ss_pred c-CCcEEeecCCccccCHHHHHHHHHHHHHh-CCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 243 V-GATTLNIPDTVGITMPTEFGKLIADIKAN-TPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 243 a-Ga~~I~L~DTvG~~~P~~v~~li~~l~~~-~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
. |...... -.+-..+....+.+..+.+. .|+ +=.+=|.||. +|+.-..++-+.|-+ =|.+|.|++
T Consensus 165 ~pgi~~~~~--~~~~~~~~~~~~~~~~ll~~~~~~----~~aI~~~nd~-~A~g~~~al~~~G~~-~di~vvg~D 231 (332)
T 2rjo_A 165 FPGIQLLDF--QVADWNSQKAFPIMQAWMTRFNSK----IKGVWAANDD-MALGAIEALRAEGLA-GQIPVTGMD 231 (332)
T ss_dssp CTTEEEEEE--EECTTCHHHHHHHHHHHHHHHGGG----EEEEEESSHH-HHHHHHHHHHHTTCB-TTBCEECSB
T ss_pred CCCcEEEee--ccCCCCHHHHHHHHHHHHHhcCCC----eeEEEECCCc-hHHHHHHHHHHcCCC-CCCEEEeec
Confidence 6 7543322 12344666667777666554 342 2255588874 666655555567876 567888875
No 419
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=60.71 E-value=34 Score=37.88 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=57.8
Q ss_pred CCCCC--CHHHHHHHHHHHHHcC-----CcEEeec--CC----ccccCHHHHHHHHHHHHHh----CCCCCceeEEEecC
Q 007056 224 DAGRS--DRKFLYEILGEVIKVG-----ATTLNIP--DT----VGITMPTEFGKLIADIKAN----TPGIENVVISTHCQ 286 (620)
Q Consensus 224 d~~r~--d~e~l~~~~~~~~~aG-----a~~I~L~--DT----vG~~~P~~v~~li~~l~~~----~~~~~~v~i~~H~H 286 (620)
|+++. +.+.+.+.++..++.| |++|-+. -| ......+|+.+++..++.. .+...+++|++
T Consensus 240 DGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISI--- 316 (545)
T 2bmb_A 240 DGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSI--- 316 (545)
T ss_dssp TTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEE---
T ss_pred CCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEE---
Confidence 77776 7999999999999999 9998776 33 2344467777765555432 12222588988
Q ss_pred CCcchHHHHHHHHHHhcCcEEeeccc
Q 007056 287 NDLGLSTANTIAGACAGARQVEVTIN 312 (620)
Q Consensus 287 ND~GlAvANslaAv~aGA~~Vd~Ti~ 312 (620)
|++--.| +.+|+++||+.|+---+
T Consensus 317 DT~~a~V--aeaAl~aGadIINDVsg 340 (545)
T 2bmb_A 317 DTYRSNV--AKEAIKVGVDIINDISG 340 (545)
T ss_dssp ECCCHHH--HHHHHHTTCCEEEETTT
T ss_pred eCCcHHH--HHHHHHcCCCEEEeCCC
Confidence 4444444 57889999999964333
No 420
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=60.64 E-value=14 Score=38.34 Aligned_cols=73 Identities=16% Similarity=0.097 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCcEEeecCCcc-ccCHHHHHHHH----HHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 232 FLYEILGEVIKVGATTLNIPDTVG-ITMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTvG-~~~P~~v~~li----~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.+.+.+++..++|++.|.+.|+.| .+.|..+.+++ +.+.+.++.. .+++-.||..+ +. ....+ .+.|++.
T Consensus 194 ~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-g~~~i~~~~G~-~~-~l~~l--~~~g~d~ 268 (359)
T 2inf_A 194 MIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-NVPLIMFGVGA-SH-LAGDW--HDLPLDV 268 (359)
T ss_dssp HHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG-CSCEEEECTTC-GG-GHHHH--HTSSCSE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc-CCcEEEEcCCc-HH-HHHHH--HHhCCCE
Confidence 345566667789999999999776 45577666543 2222223211 25677787766 22 22223 2578887
Q ss_pred Eee
Q 007056 307 VEV 309 (620)
Q Consensus 307 Vd~ 309 (620)
+..
T Consensus 269 ~~~ 271 (359)
T 2inf_A 269 VGL 271 (359)
T ss_dssp EEC
T ss_pred EEe
Confidence 754
No 421
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=60.59 E-value=1.1e+02 Score=28.69 Aligned_cols=174 Identities=13% Similarity=0.082 Sum_probs=98.1
Q ss_pred EEeCCCcccCCCCCCCC-CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeec--
Q 007056 79 VFDTTLRDGEQSPGATL-TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-- 155 (620)
Q Consensus 79 I~DtTLRDG~Qs~g~~f-s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-- 155 (620)
|+.|-+..|+ +| ..+.-.++++.+.+.|.+.|++.. + +.++.+.+.... |.+..+.
T Consensus 8 ~~~~q~~~~~-----p~~~~~~~~~~a~~~~~~Ga~~i~~~~----~---~~i~~i~~~~~~---------pv~~~~~~~ 66 (223)
T 1y0e_A 8 IVSCQALPDE-----PLHSSFIMSKMALAAYEGGAVGIRANT----K---EDILAIKETVDL---------PVIGIVKRD 66 (223)
T ss_dssp EEECCCCTTS-----TTCCHHHHHHHHHHHHHHTCSEEEEES----H---HHHHHHHHHCCS---------CEEEECBCC
T ss_pred EEEecCCCCC-----CCCCCccHHHHHHHHHHCCCeeeccCC----H---HHHHHHHHhcCC---------CEEeeeccC
Confidence 4455444443 34 457788999999999999999863 3 456666654211 2211111
Q ss_pred --------ccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEcCCCC
Q 007056 156 --------RCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDA 225 (620)
Q Consensus 156 --------r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~--G~~~V~f~~ed~ 225 (620)
....+.++.++++ |.+.|++-...- .++.+ .+.+.++.+++. |.. +..++
T Consensus 67 ~~~~~~~i~~~~~~i~~~~~~----Gad~v~l~~~~~---------~~p~~---~~~~~i~~~~~~~~~~~-v~~~~--- 126 (223)
T 1y0e_A 67 YDHSDVFITATSKEVDELIES----QCEVIALDATLQ---------QRPKE---TLDELVSYIRTHAPNVE-IMADI--- 126 (223)
T ss_dssp CTTCCCCBSCSHHHHHHHHHH----TCSEEEEECSCS---------CCSSS---CHHHHHHHHHHHCTTSE-EEEEC---
T ss_pred CCccccccCCcHHHHHHHHhC----CCCEEEEeeecc---------cCccc---CHHHHHHHHHHhCCCce-EEecC---
Confidence 0123456655554 888887654321 00000 123566777776 653 54444
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecC---C---cccc-CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcch-HHHHHH
Q 007056 226 GRSDRKFLYEILGEVIKVGATTLNIPD---T---VGIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTI 297 (620)
Q Consensus 226 ~r~d~e~l~~~~~~~~~aGa~~I~L~D---T---vG~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANsl 297 (620)
.+++. +..+.++|++.|.+.- | .+.. .+. -.++++.+++.+. +++.. +-|. -..|..
T Consensus 127 --~t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~-~~~~~~~~~~~~~----ipvia----~GGI~~~~~~~ 191 (223)
T 1y0e_A 127 --ATVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQN-DFQFLKDVLQSVD----AKVIA----EGNVITPDMYK 191 (223)
T ss_dssp --SSHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHH-HHHHHHHHHHHCC----SEEEE----ESSCCSHHHHH
T ss_pred --CCHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcc-cHHHHHHHHhhCC----CCEEE----ecCCCCHHHHH
Confidence 23443 3346789999886421 1 1111 222 2457777777652 45543 3566 578888
Q ss_pred HHHHhcCcEEe
Q 007056 298 AGACAGARQVE 308 (620)
Q Consensus 298 aAv~aGA~~Vd 308 (620)
.++++||+.|-
T Consensus 192 ~~~~~Gad~v~ 202 (223)
T 1y0e_A 192 RVMDLGVHCSV 202 (223)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 89999998773
No 422
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=60.55 E-value=72 Score=33.04 Aligned_cols=142 Identities=13% Similarity=0.156 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec----CCC-C----hhHHHHHHHHHHHhcccccccCCccceEEe------------e
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGF----PAA-S----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------L 154 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGf----P~~-s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~------------~ 154 (620)
+.+++++.+ .++|++.||+.. |.. . +.+.+.++++.+..+-.+ ..+.. +
T Consensus 34 ~~~e~l~~a---a~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g~l 103 (386)
T 1muw_A 34 DPVETVQRL---AELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTV-------PMATTNLFTHPVFKDGGF 103 (386)
T ss_dssp CHHHHHHHH---HHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTCST
T ss_pred CHHHHHHHH---HHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeE-------EEEecccccccccccCCC
Confidence 466665555 456999999975 432 2 234556666655433221 11211 1
Q ss_pred cccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcC--CCEEEEc
Q 007056 155 SRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLG--CDDVEFS 221 (620)
Q Consensus 155 ~r~~~-------~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~a~~~G--~~~V~f~ 221 (620)
+-..+ +.++.+++.....|.+.|.+....... ......+. +...+.+.++.++|++.| +. +.+-
T Consensus 104 ~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~-l~lE 180 (386)
T 1muw_A 104 TANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGA--ESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIR-FAIE 180 (386)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--SSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEe
Confidence 11111 234455555555688887764332100 00001233 455666777788888999 53 5553
Q ss_pred CCC------CCCCCHHHHHHHHHHHHHcCCc-EEee-cCC
Q 007056 222 PED------AGRSDRKFLYEILGEVIKVGAT-TLNI-PDT 253 (620)
Q Consensus 222 ~ed------~~r~d~e~l~~~~~~~~~aGa~-~I~L-~DT 253 (620)
+.. ..-.+++.+.++++. .+-. .+.+ .||
T Consensus 181 ~~~~e~~~~~~~~t~~~~~~li~~---v~~pn~vgl~lD~ 217 (386)
T 1muw_A 181 PKPNEPRGDILLPTVGHALAFIER---LERPELYGVNPEV 217 (386)
T ss_dssp CCSSSSSSEESSCSHHHHHHHHTT---SSSGGGEEECCBH
T ss_pred eCCCCCcccccCCCHHHHHHHHHH---hCCccceEEEeec
Confidence 321 122466777776653 3543 2433 476
No 423
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=60.40 E-value=20 Score=38.22 Aligned_cols=102 Identities=9% Similarity=-0.028 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.++|++.||--.| +.|++..+++++...- |.+.+=.-....+++..++.
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iEeP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~li~~--- 302 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLEEPVI---ADDVAGYAELNAMNIV---------PISGGEHEFSVIGCAELINR--- 302 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHTCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhCCCC---------CEEeCCCCCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +...+
T Consensus 303 ~a~D~v~i-------------k~~~~GGit~a~kia~~A~a~gi~-v~~h~ 339 (412)
T 3stp_A 303 KAVSVLQY-------------DTNRVGGITAAQKINAIAEAAQIP-VIPHA 339 (412)
T ss_dssp TCCSEECC-------------CHHHHTHHHHHHHHHHHHHHHTCC-BCCSS
T ss_pred CCCCEEec-------------ChhhcCCHHHHHHHHHHHHHcCCE-EEecc
No 424
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=60.39 E-value=56 Score=33.48 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=36.0
Q ss_pred HHHHHHhHcCCCEEEEecCC---CChhHHH-----HHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 102 DIARQLAKLGVDIIEAGFPA---ASKEDFE-----AVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~---~s~~d~e-----~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
++++.+.++|++.|.+.-+- -||++|+ ..+++.+.+... .+ + .+. .-+|+....- ++.+.+.|
T Consensus 197 ~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-~~--~-~~~-ih~c~g~~~~----l~~l~~~g 267 (353)
T 1j93_A 197 KYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLT-HP--N-LPL-ILYASGSGGL----LERLPLTG 267 (353)
T ss_dssp HHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHH-ST--T-CCE-EEECSSCTTT----GGGGGGGC
T ss_pred HHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHh-CC--C-CCE-EEECCChHHH----HHHHHhcC
Confidence 45556668999999986432 4677653 445555544210 00 1 133 3455443322 23344557
Q ss_pred CCEEEE
Q 007056 174 RPRIHT 179 (620)
Q Consensus 174 ~~~v~i 179 (620)
.+.+++
T Consensus 268 ~d~~~~ 273 (353)
T 1j93_A 268 VDVVSL 273 (353)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 776654
No 425
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=59.99 E-value=21 Score=38.46 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=53.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeec-CCc--c---ccCHHHHHHH---HHHHHHhCCCCC-ceeEEEecCCCcchHH
Q 007056 224 DAGRSDRKFLYEILGEVIKVGATTLNIP-DTV--G---ITMPTEFGKL---IADIKANTPGIE-NVVISTHCQNDLGLST 293 (620)
Q Consensus 224 d~~r~d~e~l~~~~~~~~~aGa~~I~L~-DTv--G---~~~P~~v~~l---i~~l~~~~~~~~-~v~i~~H~HND~GlAv 293 (620)
|++ .+.+.+.+.++...+.||+.|-+. .+. | +...+|+.++ |+.+++..+... +++|++=.=+ -.
T Consensus 206 Dgg-~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~---~~- 280 (442)
T 3mcm_A 206 DGN-FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRK---LE- 280 (442)
T ss_dssp CCS-SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCC---HH-
T ss_pred CCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCC---HH-
Confidence 666 788899999999999999998876 111 1 2234667765 666766332211 4788875433 33
Q ss_pred HHHHHHHH--hcCcE-Eee
Q 007056 294 ANTIAGAC--AGARQ-VEV 309 (620)
Q Consensus 294 ANslaAv~--aGA~~-Vd~ 309 (620)
-+.+|++ +||+. |+-
T Consensus 281 -VaeaAL~~~aGa~i~IND 298 (442)
T 3mcm_A 281 -VMQKILAKHHDIIWMIND 298 (442)
T ss_dssp -HHHHHHHHHGGGCCEEEE
T ss_pred -HHHHHHhhCCCCCEEEEc
Confidence 4477888 99999 753
No 426
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=59.60 E-value=78 Score=30.93 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=86.6
Q ss_pred CcccCCCCCCCCCHHHHHHHH---HHHhHcCCCEEEEecCCC-ChhHHHHHHHHHHHhcccccccCCccceEEeecccc-
Q 007056 84 LRDGEQSPGATLTSKEKLDIA---RQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN- 158 (620)
Q Consensus 84 LRDG~Qs~g~~fs~~~Kl~Ia---~~L~~~Gvd~IEvGfP~~-s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~- 158 (620)
+|-| ++.++.+|...+. +.+.++|++-+-+|+-.. ..-|.+++++|.+..+. + + +.|-|+-
T Consensus 63 PR~G----dF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~-------~-~--vTFHRAFD 128 (224)
T 2bdq_A 63 PRGG----NFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQG-------L-P--LVFHMAFD 128 (224)
T ss_dssp SSSS----CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTT-------C-C--EEECGGGG
T ss_pred CCCC----CCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCC-------C-e--EEEECchh
Confidence 5555 4667877765554 457789999999998643 33478899988875432 1 1 3455653
Q ss_pred ---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 007056 159 ---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 235 (620)
Q Consensus 159 ---~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~ 235 (620)
..|-..+++.|.+.|+++|-...... +.+.++.++.+.++++++... ++.-| ++-.+++.+.+
T Consensus 129 ~~~~~d~~~ale~L~~lGv~rILTSG~~~--------~~~a~~g~~~L~~Lv~~a~~r----i~Im~--GgGV~~~Ni~~ 194 (224)
T 2bdq_A 129 VIPKSDQKKSIDQLVALGFTRILLHGSSN--------GEPIIENIKHIKALVEYANNR----IEIMV--GGGVTAENYQY 194 (224)
T ss_dssp GSCTTTHHHHHHHHHHTTCCEEEECSCSS--------CCCGGGGHHHHHHHHHHHTTS----SEEEE--CSSCCTTTHHH
T ss_pred ccCCcCHHHHHHHHHHcCCCEEECCCCCC--------CCcHHHHHHHHHHHHHhhCCC----eEEEe--CCCCCHHHHHH
Confidence 26678889999999999986543221 123677888899998875432 33333 22334444444
Q ss_pred HHHHHHHcCCcEEee
Q 007056 236 ILGEVIKVGATTLNI 250 (620)
Q Consensus 236 ~~~~~~~aGa~~I~L 250 (620)
+++ ..|++.+-.
T Consensus 195 l~~---~tGv~e~H~ 206 (224)
T 2bdq_A 195 ICQ---ETGVKQAHG 206 (224)
T ss_dssp HHH---HHTCCEEEE
T ss_pred HHH---hhCCCEEcc
Confidence 433 458887774
No 427
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=59.57 E-value=1.4e+02 Score=30.41 Aligned_cols=160 Identities=19% Similarity=0.135 Sum_probs=87.4
Q ss_pred HHHHHHHhHcCC-CEEEEecCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEE
Q 007056 101 LDIARQLAKLGV-DIIEAGFPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIH 178 (620)
Q Consensus 101 l~Ia~~L~~~Gv-d~IEvGfP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~ 178 (620)
.+++..+.++|. ..|..++ .++++. +.++.+.+.. +. -+...+..+ ..+.+..++.+..+|++.|.
T Consensus 26 ~~la~av~~aG~lG~i~~~~--~~~~~~~~~i~~i~~~~-~~-----p~gvnl~~~----~~~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGGN--APKEVVKANIDKIKSLT-DK-----PFGVNIMLL----SPFVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHHTSBEEEECTT--CCHHHHHHHHHHHHHHC-CS-----CEEEEECTT----STTHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCCCcEEeCCCC--CCHHHHHHHHHHHHHhc-CC-----CEEEEecCC----CCCHHHHHHHHHHCCCCEEE
Confidence 356777888885 7776654 455543 4455554431 11 111122111 12334444555567999988
Q ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec--CCccc
Q 007056 179 TFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP--DTVGI 256 (620)
Q Consensus 179 i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~--DTvG~ 256 (620)
+-... + .+.++.+++.|+. |.+.. .+.+ .++.+.++|+|.|.+- ++-|.
T Consensus 94 ~~~g~-p------------------~~~i~~l~~~g~~-v~~~v-----~~~~----~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 94 TGAGN-P------------------SKYMERFHEAGII-VIPVV-----PSVA----LAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp ECSSC-G------------------GGTHHHHHHTTCE-EEEEE-----SSHH----HHHHHHHTTCSCEEEECTTSSEE
T ss_pred ECCCC-h------------------HHHHHHHHHcCCe-EEEEe-----CCHH----HHHHHHHcCCCEEEEECCCCCCC
Confidence 65432 1 1245556667764 54443 2333 3556778999998883 22222
Q ss_pred c-CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchH-HHHHHHHHHhcCcEEeec
Q 007056 257 T-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVT 310 (620)
Q Consensus 257 ~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~T 310 (620)
. .+. ..+++..+++.+. +||-.= -|.. -.|..+++..||+.|...
T Consensus 145 ~g~~~-~~~ll~~i~~~~~----iPViaa----GGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 145 IGKLT-TMTLVRQVATAIS----IPVIAA----GGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CCSSC-HHHHHHHHHHHCS----SCEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCcc-HHHHHHHHHHhcC----CCEEEE----CCCCCHHHHHHHHHcCCCEEEec
Confidence 1 122 2367777877652 344332 4554 468888888999998653
No 428
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=59.57 E-value=82 Score=29.81 Aligned_cols=201 Identities=8% Similarity=0.026 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCC-CCh-hHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPA-ASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
.|-.+-...+-+.+.+.|++.+=..... ..+ .+.+.++.+.+.- .+. .|..+. .........++.+..
T Consensus 13 ~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~vd-------gii~~~-~~~~~~~~~~~~~~~ 82 (276)
T 3ksm_A 13 AYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQA--PPD-------ALILAP-NSAEDLTPSVAQYRA 82 (276)
T ss_dssp THHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHS--CCS-------EEEECC-SSTTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhC--CCC-------EEEEeC-CCHHHHHHHHHHHHH
Confidence 4556667778888888998765432111 122 2345666665531 011 122221 112223344455556
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc----CCCEEEEc-CCCCCCCCHHHHHHHHHHHHHc-CC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL----GCDDVEFS-PEDAGRSDRKFLYEILGEVIKV-GA 245 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~----G~~~V~f~-~ed~~r~d~e~l~~~~~~~~~a-Ga 245 (620)
.+++.|.+-....+.........+ ..+....+++++.+. |...+.|- .........+.+.-+.+++.+. |.
T Consensus 83 ~~ipvV~~~~~~~~~~~~~~V~~d---~~~~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~ 159 (276)
T 3ksm_A 83 RNIPVLVVDSDLAGDAHQGLVATD---NYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKI 159 (276)
T ss_dssp TTCCEEEESSCCSSSCSSEEEECC---HHHHHHHHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTE
T ss_pred CCCcEEEEecCCCCCCcceEEccC---HHHHHHHHHHHHHHhcCcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCc
Confidence 688887653222110000012233 234566778888888 87767662 2222222334555555666566 65
Q ss_pred cEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 246 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 246 ~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
....+ -.+-..+....+.+..+.+..|+.+ .+-|.||. +|..-..+.-++|. -=|.+|.|++
T Consensus 160 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~-p~di~vig~d 221 (276)
T 3ksm_A 160 RIIAA--PYAGDDRGAARSEMLRLLKETPTID----GLFTPNES-TTIGALVAIRQSGM-SKQFGFIGFD 221 (276)
T ss_dssp EEEEC--CBCCSSHHHHHHHHHHHHHHCSCCC----EEECCSHH-HHHHHHHHHHHTTC-TTSSEEEEES
T ss_pred EEEEE--ecCCCcHHHHHHHHHHHHHhCCCce----EEEECCch-hhhHHHHHHHHcCC-CCCeEEEEeC
Confidence 44322 2344577777788877777666432 45577763 44444444456674 2256777765
No 429
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=59.53 E-value=21 Score=34.86 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+++...++++++.+.|++.|-+.=+ +| .-.+.|+.+++++|+ +.|+.-.=-| ...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~---~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPE---AIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTT---SEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCC---CeEeeccccC----HHHHHHHHHcCCCEE
Confidence 45688899999999999999888433 33 345788889999974 6787754333 667889999999998
No 430
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=59.47 E-value=1.3e+02 Score=29.02 Aligned_cols=120 Identities=6% Similarity=-0.103 Sum_probs=67.5
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC-C-CCCC----HHHH
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-A-GRSD----RKFL 233 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed-~-~r~d----~e~l 233 (620)
.+++.+++.++.+|.+.|.++.+- ..|. ...+ -..+.+..+.+++.|+..+.+++.. . ...+ .+++
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~-~~~~---~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (286)
T 3dx5_A 15 ISFTDIVQFAYENGFEGIELWGTH-AQNL---YMQE----YETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKC 86 (286)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEHHH-HHHH---HHHC----HHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEcccc-cccc---cccC----HHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHH
Confidence 357777888888899999986421 1111 0011 1345566677888998744554321 1 1111 3677
Q ss_pred HHHHHHHHHcCCcEEeec-CCc--cccCHHHHHHHHHHHHHhCC--CCCceeEEEecCC
Q 007056 234 YEILGEVIKVGATTLNIP-DTV--GITMPTEFGKLIADIKANTP--GIENVVISTHCQN 287 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~-DTv--G~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HN 287 (620)
.+.++.+.+.|+..|.+. -.. +...+.....+++.+++-.+ ...++.|.+|.|.
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 145 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHP 145 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCC
Confidence 788888999999998762 111 12334444444444332110 0014789988875
No 431
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=59.47 E-value=1.7e+02 Score=30.47 Aligned_cols=127 Identities=16% Similarity=0.160 Sum_probs=69.2
Q ss_pred HHHHHHHhHcCCCEEEEecC-CCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEEE
Q 007056 101 LDIARQLAKLGVDIIEAGFP-AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHT 179 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGfP-~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i 179 (620)
.+.++.|.+.|+|.|++-.. ..++.-.+.++.+.+..++ .+.+.+.+ ...++.+.+.++ |++.|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~--------v~Vi~G~v-~t~e~A~~a~~a----GAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH--------LEIIGGNV-ATAEGARALIEA----GVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------CEEEEEEE-CSHHHHHHHHHH----TCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEeeee-CCHHHHHHHHHc----CCCEEEE
Confidence 45578889999999998432 2334344677777775321 13344333 345555555554 8998877
Q ss_pred Ee-cCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 180 FI-ATS--GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 180 ~~-~~S--d~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
-. +.+ ..+.....+.. .+..+.++.+.++..++. |.- +++-.+++.+. ++..+||+.+.+.
T Consensus 177 G~gpGs~~~tr~~~g~g~p---~~~~l~~v~~~~~~~~iP-VIA---~GGI~~~~di~----kala~GAd~V~vG 240 (366)
T 4fo4_A 177 GIGPGSICTTRIVTGVGVP---QITAIADAAGVANEYGIP-VIA---DGGIRFSGDIS----KAIAAGASCVMVG 240 (366)
T ss_dssp CSSCSTTBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCC-EEE---ESCCCSHHHHH----HHHHTTCSEEEES
T ss_pred ecCCCCCCCcccccCcccc---hHHHHHHHHHHHhhcCCe-EEE---eCCCCCHHHHH----HHHHcCCCEEEEC
Confidence 21 111 11221112222 234455555666666665 432 34455655543 3456799888754
No 432
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=59.43 E-value=1.4e+02 Score=29.54 Aligned_cols=144 Identities=11% Similarity=0.096 Sum_probs=79.7
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHH-------HHHHHHHhHcCCCEEEEec-----CCCChhHHHHHHHHHHHhc-ccccc
Q 007056 77 VRVFDTTLRDGEQSPGATLTSKEK-------LDIARQLAKLGVDIIEAGF-----PAASKEDFEAVRTIAKEVG-NAVDA 143 (620)
Q Consensus 77 V~I~DtTLRDG~Qs~g~~fs~~~K-------l~Ia~~L~~~Gvd~IEvGf-----P~~s~~d~e~v~~i~~~~~-~~~~~ 143 (620)
+.++-+.++.| ..+.++. .+.++.|.+.|+|.|=++- ......+...++.|.+... |. +
T Consensus 55 ~~~~~ar~~~~------~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~-~- 126 (273)
T 2xed_A 55 FSFHSTRMRMH------TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGG-S- 126 (273)
T ss_dssp EEEEEEEECCC------BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTT-C-
T ss_pred eEEEEeCCccC------CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccC-C-
Confidence 66666667776 2334432 3467888889999988752 1111123344455555431 10 0
Q ss_pred cCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 144 ESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 144 ~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
-+|.+ .. .+...++++..|..+|.+..+... .......++.++.|++.+.....
T Consensus 127 ---~iPv~-~~-------~~A~~~al~~~g~~rvgvltp~~~---------------~~~~~~~~~l~~~Gi~v~~~~~~ 180 (273)
T 2xed_A 127 ---QALVR-SS-------AGALVEGLRALDAQRVALVTPYMR---------------PLAEKVVAYLEAEGFTISDWRAL 180 (273)
T ss_dssp ---CCEEE-EH-------HHHHHHHHHHTTCCEEEEEECSCH---------------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ---CCCEe-cH-------HHHHHHHHHHcCCCeEEEEcCChh---------------hhHHHHHHHHHHCCCEEeccccC
Confidence 02332 11 244445555557789999865332 11123446666789863333222
Q ss_pred C------CCCCCHHHHHHHHHHHHHcCCcEEeec-CCc
Q 007056 224 D------AGRSDRKFLYEILGEVIKVGATTLNIP-DTV 254 (620)
Q Consensus 224 d------~~r~d~e~l~~~~~~~~~aGa~~I~L~-DTv 254 (620)
+ .++.+++.+.++++.+.+.|+|.|.|. -|.
T Consensus 181 ~~~~~~~~g~~~~~~l~~~~~~l~~~gadaIvLg~CT~ 218 (273)
T 2xed_A 181 EVADNTEVGCIPGEQVMAAARSLDLSEVDALVISCAVQ 218 (273)
T ss_dssp CCCBHHHHHTCCHHHHHHHHHHSCCTTCSEEEEESSSS
T ss_pred CCccchhhcccCHHHHHHHHHHHhhCCCCEEEEcCCCC
Confidence 1 225567778888887766689999888 553
No 433
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=59.34 E-value=13 Score=38.80 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCcEEeecCCcc-ccCHHHHHH--------HHHHHH-HhCC-CCCceeEEEecCCCcchHHHHHHHHH
Q 007056 232 FLYEILGEVIKVGATTLNIPDTVG-ITMPTEFGK--------LIADIK-ANTP-GIENVVISTHCQNDLGLSTANTIAGA 300 (620)
Q Consensus 232 ~l~~~~~~~~~aGa~~I~L~DTvG-~~~P~~v~~--------li~~l~-~~~~-~~~~v~i~~H~HND~GlAvANslaAv 300 (620)
.+.+.+++.+++||+.|.+.|+.| .+.|..+.+ +++.++ +..| +.+++++-.||.++ +.-+- .-.
T Consensus 198 ~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~ 273 (367)
T 1r3s_A 198 ALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELA 273 (367)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHT
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHH
Confidence 345556667789999999998655 457766544 455565 4322 10025688888776 32221 223
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHH
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAF 330 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L 330 (620)
+.|++.++.- . ..+++++...+
T Consensus 274 ~~g~d~i~~d-----~---~~dl~~a~~~~ 295 (367)
T 1r3s_A 274 QAGYEVVGLD-----W---TVAPKKARECV 295 (367)
T ss_dssp TSSCSEEECC-----T---TSCHHHHHHHH
T ss_pred hcCCCEEEeC-----C---CCCHHHHHHHc
Confidence 6788877543 1 25777665444
No 434
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=59.33 E-value=36 Score=32.45 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=36.1
Q ss_pred HHHHHHHHHHcCCcEEeecCCcccc-CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..++++.+.++|++.|.+.|..+.. ......++++.+++.+. +++.+|.--.. ...+..++++||+.|..
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~----ipvi~~g~i~~---~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS----IPVLVGGGVRS---LEDATTLFRAGADKVSV 105 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS----SCEEEESSCCS---HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC----CCEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 4455666666677766666554432 11223456666666542 44554432111 23345566677777653
No 435
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=59.31 E-value=49 Score=35.55 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=39.0
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccc------------cCHHHHHHHHHHHHHh
Q 007056 218 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI------------TMPTEFGKLIADIKAN 272 (620)
Q Consensus 218 V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~------------~~P~~v~~li~~l~~~ 272 (620)
|..+.+.+ .-++..+.+.++.++++|+-.|+|-|.++. ..++++.+.|+..+..
T Consensus 148 IiaD~DtG-fG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A 213 (433)
T 3eol_A 148 IVADAEAG-FGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLA 213 (433)
T ss_dssp EEEECC----CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHH
T ss_pred eEEECCCC-CCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHH
Confidence 77888544 445557899999999999999999999862 3456666666666543
No 436
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=59.21 E-value=67 Score=31.00 Aligned_cols=124 Identities=8% Similarity=0.007 Sum_probs=64.9
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCE--EE-EcCCC--CCCCC-----
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VE-FSPED--AGRSD----- 229 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~--V~-f~~ed--~~r~d----- 229 (620)
.+++.+++.++..|.+.|.++.... +.......+. +.+.+..+.+++.|+.. +. ..+.. ....+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~ 85 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQ--RQWRAAPLTT----QTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALE 85 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCS--SCSSCCCCCH----HHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCC--CcCcCCCCCH----HHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHH
Confidence 4567777777788999998853211 1000001121 23445566778888751 21 12211 11122
Q ss_pred --HHHHHHHHHHHHHcCCcEEeecCCc--cccCHH-HHHHHHHHHHHhCCCCCceeEEEecCCCc
Q 007056 230 --RKFLYEILGEVIKVGATTLNIPDTV--GITMPT-EFGKLIADIKANTPGIENVVISTHCQNDL 289 (620)
Q Consensus 230 --~e~l~~~~~~~~~aGa~~I~L~DTv--G~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~ 289 (620)
.+++.+.++.+.+.|+..|++.-.. +...++ .+..+++.+++-.....++.|.++.|+..
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~ 150 (285)
T 1qtw_A 86 KSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQ 150 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCC
Confidence 3567788888889999988763211 111233 33444444443211112478999888753
No 437
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=59.20 E-value=26 Score=34.38 Aligned_cols=191 Identities=18% Similarity=0.196 Sum_probs=98.3
Q ss_pred HHHHHHHHhHcCCCEEEEe----cCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 100 KLDIARQLAKLGVDIIEAG----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 100 Kl~Ia~~L~~~Gvd~IEvG----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
=+++++...+.|++++=+= .....+..++.++++++... .|.-.+=+-.+.++++..+++ |++
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~---------~pl~vGGGIrs~e~~~~~l~~----Gad 99 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVS---------VNLQVGGGIRSKEEVKALLDC----GVK 99 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCC---------SEEEEESSCCCHHHHHHHHHT----TCS
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcC---------CCeEeccccccHHHHHHHHHc----CCC
Confidence 4667888999999876552 11123345688888888632 233333333356677766654 999
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEE--EEcC---------CCCCCC-CHHHHHHHHHHHHHc
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV--EFSP---------EDAGRS-DRKFLYEILGEVIKV 243 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V--~f~~---------ed~~r~-d~e~l~~~~~~~~~a 243 (620)
+|.+-..+- ..+ +.+.+ .++..|-..+ ..+. .+.++. ..-.+.+.++.+.+.
T Consensus 100 kVii~t~a~---------~~p----~li~e---~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~ 163 (243)
T 4gj1_A 100 RVVIGSMAI---------KDA----TLCLE---ILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK 163 (243)
T ss_dssp EEEECTTTT---------TCH----HHHHH---HHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT
T ss_pred EEEEccccc---------cCC----chHHH---HHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc
Confidence 986532221 111 12222 2334443211 1111 011111 112245777888889
Q ss_pred CCcEEeec--CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcc
Q 007056 244 GATTLNIP--DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 321 (620)
Q Consensus 244 Ga~~I~L~--DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa 321 (620)
|+..|.+- |..|.+.-..+ ++++.+.+.+++ +|+-.. -|.+--.=+..++.+ +++.+.|--==.|..
T Consensus 164 g~~eil~t~Id~DGt~~G~d~-~l~~~l~~~~~~---ipvias----GGv~~~~Dl~~l~~~---~~gvivg~Al~~g~i 232 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNV-RLYKLIHEIFPN---ICIQAS----GGVASLKDLENLKGI---CSGVIVGKALLDGVF 232 (243)
T ss_dssp TCCEEEEEETTC-----CCCH-HHHHHHHHHCTT---SEEEEE----SCCCSHHHHHHTTTT---CSEEEECHHHHTTSS
T ss_pred CCcEEEeeeecccccccCCCH-HHHHHHHHhcCC---CCEEEE----cCCCCHHHHHHHHcc---CchhehHHHHHCCCC
Confidence 99987775 77888876555 477888887764 555443 233334445555555 334444422234666
Q ss_pred cHHHHHHHH
Q 007056 322 SLEEVVMAF 330 (620)
Q Consensus 322 ~lEevv~~L 330 (620)
+++|++..|
T Consensus 233 ~l~ea~~~l 241 (243)
T 4gj1_A 233 SVEEGIRCL 241 (243)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 776665544
No 438
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=59.20 E-value=1.2e+02 Score=29.56 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=80.9
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCEEE--EcCCCCCCCCHHHHH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVE--FSPEDAGRSDRKFLY 234 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~-G~~~V~--f~~ed~~r~d~e~l~ 234 (620)
..++|+...+..+..+...|.+. +.+ + .+. ++.+.. ++. |+ .+.. .+..+.+...
T Consensus 34 t~~~i~~l~~~a~~~~~~aVcv~----p~~------------v-~a~---~~l~~~~~v~-v~tvigFP-~G~~~~~~k~ 91 (234)
T 1n7k_A 34 TEEDVRNLVREASDYGFRCAVLT----PVY------------T-VKI---SGLAEKLGVK-LCSVIGFP-LGQAPLEVKL 91 (234)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEC----HHH------------H-HHH---HHHHHHHTCC-EEEEESTT-TCCSCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc----hHH------------h-eee---hHhCCCCCce-EEEEeCCC-CCCCcHHHHH
Confidence 46677766655555677777642 111 1 222 222233 443 22 1332 2334556566
Q ss_pred HHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCC--CC-ceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 235 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPG--IE-NVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 235 ~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~--~~-~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
.-++.+++.||+.|-+.=-.|...- .+.+-+..+++..++ .. ++.|+.-..+|--. .--+..|+++||+.|-++-
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i-~~a~ria~eaGADfVKTsT 169 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTL-SLLVDSSRRAGADIVKTST 169 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHH-HHHHHHHHHTTCSEEESCC
T ss_pred HHHHHHHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHH-HHHHHHHHHhCCCEEEeCC
Confidence 6677788899998877766676655 666666666654211 11 23455444444222 2355778999999999985
Q ss_pred ccccCCcCcccHHHHH
Q 007056 312 NGIGERAGNASLEEVV 327 (620)
Q Consensus 312 ~GlGERaGNa~lEevv 327 (620)
+- + .+|++.+|++-
T Consensus 170 G~-~-~~~gAt~~dv~ 183 (234)
T 1n7k_A 170 GV-Y-TKGGDPVTVFR 183 (234)
T ss_dssp SS-S-CCCCSHHHHHH
T ss_pred CC-C-CCCCCCHHHHH
Confidence 32 1 12677777654
No 439
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=59.10 E-value=69 Score=30.78 Aligned_cols=201 Identities=11% Similarity=-0.021 Sum_probs=102.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
..|-.+-...+-+.+.+.|++.+-. .....++ +.+.++.+... .+ ..|..+. .... +..++.+..
T Consensus 25 ~~~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~v-------dgiIi~~-~~~~--~~~~~~l~~ 90 (292)
T 3k4h_A 25 NPFFPEVIRGISSFAHVEGYALYMS-TGETEEEIFNGVVKMVQGR---QI-------GGIILLY-SREN--DRIIQYLHE 90 (292)
T ss_dssp STHHHHHHHHHHHHHHHTTCEEEEC-CCCSHHHHHHHHHHHHHTT---CC-------CEEEESC-CBTT--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEE-eCCCCHHHHHHHHHHHHcC---CC-------CEEEEeC-CCCC--hHHHHHHHH
Confidence 3466677778888899999865542 2211111 12333333321 11 1122111 1111 123444556
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
.+++.|.+-....+.........+ +.+....+++++.++|...+.| +.........+.+.-+.+++.+.|......
T Consensus 91 ~~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~ 167 (292)
T 3k4h_A 91 QNFPFVLIGKPYDRKDEITYVDND---NYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKE 167 (292)
T ss_dssp TTCCEEEESCCSSCTTTSCEEECC---HHHHHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred CCCCEEEECCCCCCCCCCCEEEEC---cHHHHHHHHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChh
Confidence 688887654332211000112222 3345667888888889876665 322222233456666777777888642100
Q ss_pred cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 251 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 251 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
.-..+-..+....+.+..+.+..|+.+ .+-|.||. +|..-.-+.-++|-+. =|.+|.|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 168 YILHFDFSRESGQQAVEELMGLQQPPT----AIMATDDL-IGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp GEEECCSSHHHHHHHHHHHHTSSSCCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred eEEecCCCHHHHHHHHHHHHcCCCCCc----EEEEcChH-HHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 000244567777888877776655432 44477763 4444344445677642 266777765
No 440
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=59.04 E-value=1.4e+02 Score=29.23 Aligned_cols=69 Identities=12% Similarity=-0.000 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHc-CCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE
Q 007056 228 SDRKFLYEILGEVIKV-GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 306 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~a-Ga~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 306 (620)
.+++.+..+.+...+. |-..|++- ..|... ..++|+.+++..++. .+.+++-.++ ..-+....+ ||+.
T Consensus 146 ~~~e~~~~~a~~g~~~l~~~~Vyl~-~~G~~~---~~~~i~~i~~~~~~~-Pv~vGgGI~s-----~e~a~~~~~-gAd~ 214 (234)
T 2f6u_A 146 IDKELAASYALVGEKLFNLPIIYIE-YSGTYG---NPELVAEVKKVLDKA-RLFYGGGIDS-----REKAREMLR-YADT 214 (234)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEE-CTTSCC---CHHHHHHHHHHCSSS-EEEEESCCCS-----HHHHHHHHH-HSSE
T ss_pred CCHHHHHHHHHhhhhhcCCCEEEEe-CCCCcc---hHHHHHHHHHhCCCC-CEEEEecCCC-----HHHHHHHHh-CCCE
Confidence 3666666666655432 33455543 366422 567888888876322 2566644444 222333344 8887
Q ss_pred E
Q 007056 307 V 307 (620)
Q Consensus 307 V 307 (620)
|
T Consensus 215 V 215 (234)
T 2f6u_A 215 I 215 (234)
T ss_dssp E
T ss_pred E
Confidence 6
No 441
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=58.88 E-value=80 Score=30.24 Aligned_cols=198 Identities=13% Similarity=0.066 Sum_probs=97.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc-
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY- 171 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~- 171 (620)
.|-.+-...+-+.+.+.|++.+-. .....++ +.+.++.+... .+ ..|..+..... +..++.+..
T Consensus 34 ~~~~~~~~gi~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~---~v-------dgii~~~~~~~---~~~~~~l~~~ 99 (296)
T 3brq_A 34 IYFSELLFHAARMAEEKGRQLLLA-DGKHSAEEERQAIQYLLDL---RC-------DAIMIYPRFLS---VDEIDDIIDA 99 (296)
T ss_dssp -CHHHHHHHHHHHHHHTTCEEEEE-CCTTSHHHHHHHHHHHHHT---TC-------SEEEEECSSSC---HHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHCCCEEEEE-eCCCCHHHHHHHHHHHHhc---CC-------CEEEEecCCCC---hHHHHHHHhc
Confidence 355666777778888999975543 3222332 23455555442 11 12222221111 123344455
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCcEEe-
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN- 249 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~~I~- 249 (620)
.+++.|.+-....+.. ......+. .+....+++++.++|...|.| ..........+.+.-+.+++.+.|.....
T Consensus 100 ~~iPvV~~~~~~~~~~-~~~V~~d~---~~~~~~a~~~l~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~ 175 (296)
T 3brq_A 100 HSQPIMVLNRRLRKNS-SHSVWCDH---KQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEK 175 (296)
T ss_dssp CSSCEEEESCCCSSSG-GGEECCCH---HHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHTTTCCCCGG
T ss_pred CCCCEEEEccccCCCC-CCEEEEch---HHHHHHHHHHHHHCCCceEEEEcCCCCCccHHHHHHHHHHHHHHcCCCCChh
Confidence 6888776533222111 01233333 344566778888888766655 32212222234555566666677753210
Q ss_pred -ecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-EeeccccccC
Q 007056 250 -IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIGE 316 (620)
Q Consensus 250 -L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlGE 316 (620)
+. .|-..+....+.+..+.+..++.+ .+=|.||. +|.+-..++-+.|.+. =|.+|.|++.
T Consensus 176 ~~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~vP~di~vvg~d~ 237 (296)
T 3brq_A 176 LIA--NGKWTPASGAEGVEMLLERGAKFS----ALVASNDD-MAIGAMKALHERGVAVPEQVSVIGFDD 237 (296)
T ss_dssp GEE--CCCSSHHHHHHHHHHHHTC--CCS----EEEESSHH-HHHHHHHHHHHHTCCTTTTCEEEEESC
T ss_pred hEE--eCCCChhHHHHHHHHHHhCCCCCC----EEEECChH-HHHHHHHHHHHcCCCCCCceEEEeecC
Confidence 11 133456666677766655434322 34466654 4444444445667642 1566777653
No 442
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=58.77 E-value=41 Score=38.51 Aligned_cols=116 Identities=13% Similarity=0.090 Sum_probs=76.3
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCCEE-EEcCCCCCCCCHHH---
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRK-TKQQVVEIARSMVKFARSLGCDDV-EFSPEDAGRSDRKF--- 232 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~-t~ee~l~~~~~~v~~a~~~G~~~V-~f~~ed~~r~d~e~--- 232 (620)
..+.+.+-++.+...+...+|+...-.+.|....++. -++...+.++++++||+++|++.| +++|......+.+.
T Consensus 142 s~~~ik~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~rgI~vvpeI~Pg~~~~~~~~~~~~ 221 (716)
T 2cho_A 142 SHQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQELVAVANENEVDFVWAIHPGQDIKWNKEDRDL 221 (716)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCTTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeeccCcccccccccccCChhhHHHHHHHHHHHHHcCCEEEEeecccccCCCCHHHHHH
Confidence 3677888888888889999998776554554212221 223356789999999999998622 45665333333333
Q ss_pred HHHHHHHHHHcCCcEEeec--CCcccc-CHHHHHHHHHHHHHhC
Q 007056 233 LYEILGEVIKVGATTLNIP--DTVGIT-MPTEFGKLIADIKANT 273 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~--DTvG~~-~P~~v~~li~~l~~~~ 273 (620)
++..+..+.+.|+..+.+. |+.|.. .+....+++.++.+++
T Consensus 222 l~~k~~~l~~lG~r~~~i~~Dd~~~~g~~~~~~~~ll~~~~~~~ 265 (716)
T 2cho_A 222 LLAKFEKMYQLGVRSFAVFFDDISGEGTNPQKQAELLNYIDEKF 265 (716)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSCCSGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeeEEecccCCCCCcchHHHHHHHHHHHHHH
Confidence 4444555678899876554 666543 4555788999888774
No 443
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=58.77 E-value=1.5e+02 Score=29.61 Aligned_cols=192 Identities=15% Similarity=0.092 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHhH-cCCCEEEE-e----cCCCChhHH-HHHHHHHHHhcccccccCCccceEEeecccchhh-HHHH
Q 007056 94 TLTSKEKLDIARQLAK-LGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTA 165 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~-~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a 165 (620)
.+..+.-.++++.|.+ .|++-|=+ | ++.-+.+|+ +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la 92 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-------DQIALIAQVGSVNLKEAVELG 92 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEecCCCCHHHHHHHH
Confidence 4788888899999999 99999877 4 466666665 44555555432 3357888888755444 4444
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHc
Q 007056 166 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKV 243 (620)
Q Consensus 166 ~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed--~~r~d~e~l~~~~~~~~~a 243 (620)
-. ...+|++.+-+..|-. .+.+.++.++-..+..+. .++.-+-|+... +...+++.+.++++ .
T Consensus 93 ~~-a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La~----~ 157 (293)
T 1f6k_A 93 KY-ATELGYDCLSAVTPFY-------YKFSFPEIKHYYDTIIAE---TGSNMIVYSIPFLTGVNMGIEQFGELYK----N 157 (293)
T ss_dssp HH-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---HCCCEEEEECHHHHCCCCCHHHHHHHHT----S
T ss_pred HH-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEECccccCcCCCHHHHHHHhc----C
Confidence 33 3456999887766642 245666666655544442 234545665332 33457777766652 2
Q ss_pred CCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeeccccccCCcCcccH
Q 007056 244 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 323 (620)
Q Consensus 244 Ga~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~l 323 (620)
...+.+.||.|- ..++.++++. .++ ..+ +-++++ ..+.++..|++.+ +.| .+|..-
T Consensus 158 -pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P 213 (293)
T 1f6k_A 158 -PKVLGVKFTAGD--FYLLERLKKA----YPN---HLI-WAGFDE------MMLPAASLGVDGA---IGS----TFNVNG 213 (293)
T ss_dssp -TTEEEEEECSCC--HHHHHHHHHH----CTT---SEE-EECCGG------GHHHHHHTTCSEE---EES----THHHHH
T ss_pred -CCEEEEEECCCC--HHHHHHHHHh----CCC---eEE-EECcHH------HHHHHHHCCCcEE---EeC----HHHhhH
Confidence 578999999884 3556555542 332 222 223433 2566777898654 443 356666
Q ss_pred HHHHHHHH
Q 007056 324 EEVVMAFK 331 (620)
Q Consensus 324 Eevv~~L~ 331 (620)
+.++...+
T Consensus 214 ~~~~~l~~ 221 (293)
T 1f6k_A 214 VRARQIFE 221 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555444
No 444
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=58.75 E-value=31 Score=35.34 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=71.6
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEe-ec-CCccccCHHHHHHHHHHHHHhCCCCCcee
Q 007056 203 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN-IP-DTVGITMPTEFGKLIADIKANTPGIENVV 280 (620)
Q Consensus 203 ~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~-L~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~ 280 (620)
.+++++.|++.|+-.-.|+. .+.+.+..+++++.+.+...|. +. .+..++-...+..++..+.+ . ++|
T Consensus 5 ~~~ll~~A~~~~yAV~AfNv-----~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~-~----~VP 74 (305)
T 1rvg_A 5 GLEILKKAREEGYGVGAFNV-----NNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE-A----RVP 74 (305)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH-C----SSC
T ss_pred HHHHHHHHHHCCCEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh-C----CCc
Confidence 45778899999886346776 6779999999999999876443 32 22233334556677777766 3 477
Q ss_pred EEEecCCCcchHHHHHHHHHHhcCcE--Eeecccccc
Q 007056 281 ISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIG 315 (620)
Q Consensus 281 i~~H~HND~GlAvANslaAv~aGA~~--Vd~Ti~GlG 315 (620)
+.+|. |-|....-...|+++|.+- +|+|-..+-
T Consensus 75 ValHl--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~e 109 (305)
T 1rvg_A 75 VAVHL--DHGSSYESVLRALRAGFTSVMIDKSHEDFE 109 (305)
T ss_dssp EEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHH
T ss_pred EEEEC--CCCCCHHHHHHHHHcCCCeeeeCCCCCCHH
Confidence 88765 5566678899999999986 688866543
No 445
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=58.68 E-value=1.2e+02 Score=28.28 Aligned_cols=92 Identities=14% Similarity=0.030 Sum_probs=54.5
Q ss_pred HHHHHHHHHc--CCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeE
Q 007056 204 RSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVI 281 (620)
Q Consensus 204 ~~~v~~a~~~--G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i 281 (620)
.+.++.+|+. +. .+.+++.. ...+++ +++.+.++|++.|.+.+..+ ++.+.++++.+++. + +.+
T Consensus 41 ~~~i~~ir~~~~~~-~i~~~~~~--~~~~~~---~~~~~~~~Gad~v~v~~~~~---~~~~~~~~~~~~~~--g---~~~ 106 (211)
T 3f4w_A 41 VNAIKAIKEKYPHK-EVLADAKI--MDGGHF---ESQLLFDAGADYVTVLGVTD---VLTIQSCIRAAKEA--G---KQV 106 (211)
T ss_dssp THHHHHHHHHCTTS-EEEEEEEE--CSCHHH---HHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHH--T---CEE
T ss_pred HHHHHHHHHhCCCC-EEEEEEEe--ccchHH---HHHHHHhcCCCEEEEeCCCC---hhHHHHHHHHHHHc--C---CeE
Confidence 3556666665 33 24333321 122332 37788899999999988753 46667888888775 2 233
Q ss_pred EEecCCCcchHHHHHHHHHHhcCcEEeec
Q 007056 282 STHCQNDLGLSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 282 ~~H~HND~GlAvANslaAv~aGA~~Vd~T 310 (620)
.+-+++- .....-...+.++|++.|-+.
T Consensus 107 ~v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 107 VVDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EEECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred EEEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 3322221 122344678889999998543
No 446
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=58.60 E-value=1.4e+02 Score=29.29 Aligned_cols=120 Identities=17% Similarity=0.145 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCCE-EEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee--cCC----cc-------------ccCHHHHH
Q 007056 204 RSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--PDT----VG-------------ITMPTEFG 263 (620)
Q Consensus 204 ~~~v~~a~~~G~~~-V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L--~DT----vG-------------~~~P~~v~ 263 (620)
.+..+.+|+.|... +-|- -.+.-+.+...++++++.++|+|.|-+ |=+ -| .++...+-
T Consensus 5 ~~~f~~~~~~~~~~~i~~i--~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~ 82 (268)
T 1qop_A 5 ENLFAQLNDRREGAFVPFV--TLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCF 82 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEE--ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhcCCceEEEEe--eCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 34445555555432 1121 133455688889999999999997655 111 01 12334456
Q ss_pred HHHHHHHHhCCCCCceeEEEec-CCC-cchHHHH-HHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 264 KLIADIKANTPGIENVVISTHC-QND-LGLSTAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 264 ~li~~l~~~~~~~~~v~i~~H~-HND-~GlAvAN-slaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
++++.+++..++ +|+.+=. -|. +-.++.+ .-.+.++||+.|-.--..+ -.+++++..++.++
T Consensus 83 ~~v~~ir~~~~~---~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~------e~~~~~~~~~~~~g 147 (268)
T 1qop_A 83 EMLAIIREKHPT---IPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPV------EESAPFRQAALRHN 147 (268)
T ss_dssp HHHHHHHHHCSS---SCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG------GGCHHHHHHHHHTT
T ss_pred HHHHHHHhcCCC---CCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH------HHHHHHHHHHHHcC
Confidence 889999988432 4543311 111 1112222 3447788999765432222 23455566666543
No 447
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=58.50 E-value=73 Score=31.41 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=64.9
Q ss_pred HHHHHHHHHhHcCCCEEEEe-cCCCChhHHHHHHHHHHHhcccccccCCccceEEe-ecccchhhHHHHHHHHhcCCCCE
Q 007056 99 EKLDIARQLAKLGVDIIEAG-FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKRPR 176 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvG-fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~ag~~~ 176 (620)
+-.++++...+.|.+.|-+= -+.......+.++.+.+.+. .|.++. |. .+..+++.+.+ +|++.
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~---------lPvl~kdfI-~d~~qi~~a~~----~GAD~ 131 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD---------LPLLRKDFV-VDPFMLEEARA----FGASA 131 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC---------SCEEEESCC-CSHHHHHHHHH----TTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcC---------CCEEECCcC-CCHHHHHHHHH----cCCCE
Confidence 45789999999999999882 12211122345555555431 133322 22 13334554443 59999
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 177 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 177 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
|++.... + + +.+.+++++++.+|++ +-+.. ++++.+ +.+.++|++.|.+
T Consensus 132 VlL~~~~--------l-----~--~~l~~l~~~a~~lGl~-~lvev-----~~~~E~----~~a~~~gad~IGv 180 (254)
T 1vc4_A 132 ALLIVAL--------L-----G--ELTGAYLEEARRLGLE-ALVEV-----HTEREL----EIALEAGAEVLGI 180 (254)
T ss_dssp EEEEHHH--------H-----G--GGHHHHHHHHHHHTCE-EEEEE-----CSHHHH----HHHHHHTCSEEEE
T ss_pred EEECccc--------h-----H--HHHHHHHHHHHHCCCe-EEEEE-----CCHHHH----HHHHHcCCCEEEE
Confidence 9886542 1 1 3567888889999985 33222 334433 3566778877655
No 448
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=58.42 E-value=33 Score=34.42 Aligned_cols=97 Identities=11% Similarity=-0.013 Sum_probs=64.6
Q ss_pred cCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC
Q 007056 171 YAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG 244 (620)
.+|++.|-+ ..|- -+ ..+ ..|.+|++.......+-++ ...|..+.+.++..+++...+-+.++.++|
T Consensus 35 ~aG~d~ilv--Gdsl-~~-~~lG~~dt~~vtldemi~h~~aV~r~~~---~~~vvaD~pfgsy~~~~~a~~~a~rl~kaG 107 (264)
T 1m3u_A 35 DEGLNVMLV--GDSL-GM-TVQGHDSTLPVTVADIAYHTAAVRRGAP---NCLLLADLPFMAYATPEQAFENAATVMRAG 107 (264)
T ss_dssp HHTCCEEEE--CTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHHCT---TSEEEEECCTTSSSSHHHHHHHHHHHHHTT
T ss_pred HcCCCEEEE--CHHH-HH-HHcCCCCCCCcCHHHHHHHHHHHHhhCC---CCcEEEECCCCCcCCHHHHHHHHHHHHHcC
Confidence 458888744 3332 22 233 3578888776655444332 223557777755559999999999999999
Q ss_pred CcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEec
Q 007056 245 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 285 (620)
Q Consensus 245 a~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 285 (620)
|+.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 108 a~aVklEgg------~e~~~~I~al~~a-----gipV~gHi 137 (264)
T 1m3u_A 108 ANMVKIEGG------EWLVETVQMLTER-----AVPVCGHL 137 (264)
T ss_dssp CSEEECCCS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred CCEEEECCc------HHHHHHHHHHHHC-----CCCeEeee
Confidence 999999997 3677788888764 24565553
No 449
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=58.27 E-value=41 Score=35.25 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||--+| +.+++..+++.+...- |.+.+=.-....+++..++.
T Consensus 215 n~~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 279 (393)
T 2og9_A 215 NQQWDRPTAQRMCRIFEPFNLVWIEEPLD---AYDHEGHAALALQFDT---------PIATGEMLTSAAEHGDLIRH--- 279 (393)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHHHCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHHhCCC---------CEEeCCCcCCHHHHHHHHHC---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHcCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQV--VEIARSMVKFARSLGC 215 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~--l~~~~~~v~~a~~~G~ 215 (620)
..++.|.+ +...+ +..+.++++.|+++|+
T Consensus 280 ~~~d~v~i---------------k~~~~GGit~~~~i~~~A~~~gi 310 (393)
T 2og9_A 280 RAADYLMP---------------DAPRVGGITPFLKIASLAEHAGL 310 (393)
T ss_dssp TCCSEECC---------------CHHHHTSHHHHHHHHHHHHHTTC
T ss_pred CCCCEEee---------------CccccCCHHHHHHHHHHHHHcCC
No 450
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=58.16 E-value=12 Score=38.29 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCcEEeecCCccc-cCHHHHHH--------HHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHH-
Q 007056 231 KFLYEILGEVIKVGATTLNIPDTVGI-TMPTEFGK--------LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA- 300 (620)
Q Consensus 231 e~l~~~~~~~~~aGa~~I~L~DTvG~-~~P~~v~~--------li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv- 300 (620)
+.+.+.+++.+++|++.|.+.|+.|. +.|..+.+ +++.+++. ++ +++-.||..+ .+-+..+
T Consensus 179 ~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g---~~~i~~~~g~-----~~~l~~l~ 249 (338)
T 2eja_A 179 ETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SD---TPVIYFFRGS-----SSFIDLAV 249 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CC---CCEEEEESSH-----HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CC---CCEEEEcCCc-----HHHHHHHH
Confidence 34556667777899999999997655 57877654 45566654 43 6688888544 2233333
Q ss_pred HhcCcEEeeccccccCCcCcccHHHHHHHH
Q 007056 301 CAGARQVEVTINGIGERAGNASLEEVVMAF 330 (620)
Q Consensus 301 ~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L 330 (620)
+.|++.++.-. ..+++++...+
T Consensus 250 ~~g~d~~~~d~--------~~dl~~~~~~~ 271 (338)
T 2eja_A 250 DYRADALSVDW--------SVDIPELFKIY 271 (338)
T ss_dssp TSCCSEEECCT--------TSCHHHHHHHC
T ss_pred HcCCCEEEeCC--------CCCHHHHHHhC
Confidence 56888775422 26887766555
No 451
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=58.08 E-value=13 Score=35.98 Aligned_cols=69 Identities=14% Similarity=0.098 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccCHH-HHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..++++.+.++|++.|.+-|-.|...|. .. +.++.+++.+ ++|+.+|.--.. ......++++||+.|..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~----~ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL----DVQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC----SSEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc----CCcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 3466778888999999998754433222 12 8888888876 367877744322 23467778899998854
No 452
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=58.07 E-value=29 Score=34.15 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=61.5
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEe
Q 007056 205 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH 284 (620)
Q Consensus 205 ~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H 284 (620)
+..+..++.++-.| +-. .+++...++++++.+.|++.|-+.-+ +|. -.+.|+.+++.+|+ +.++.-
T Consensus 26 ~~~~~l~~~~vv~V-ir~-----~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~---~~iGaG 91 (232)
T 4e38_A 26 TINNQLKALKVIPV-IAI-----DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPE---MLIGAG 91 (232)
T ss_dssp HHHHHHHHHCEEEE-ECC-----SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTT---CEEEEE
T ss_pred HHHHHHHhCCEEEE-EEc-----CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCC---CEEeEC
Confidence 45566666765323 222 34578899999999999999998654 333 35788889998874 667754
Q ss_pred cCCCcchHHHHHHHHHHhcCcEEee
Q 007056 285 CQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 285 ~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
. . +-..-+..|+++||+.|..
T Consensus 92 T---V-lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 92 T---I-LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp C---C-CSHHHHHHHHHHTCSEEEC
T ss_pred C---c-CCHHHHHHHHHcCCCEEEe
Confidence 3 1 2367788999999999963
No 453
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=57.89 E-value=1.8e+02 Score=30.11 Aligned_cols=162 Identities=15% Similarity=0.064 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
+.++-.+-++.+.+.|++.|++-.......+.+.++.+.+.++ .+ ...+-+......++....++.+...++.
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g-d~------~l~vD~n~~~~~~~a~~~~~~l~~~~i~ 219 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGEIG-DA------RLRLDANEGWSVHDAINMCRKLEKYDIE 219 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTTST-TC------EEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHHcC-Cc------EEEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 6677777788888999999998432222345677777766543 21 0122222222334443445566666777
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcc
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 255 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG 255 (620)
.|.-.++.. .++.. .+..+..++. |.- |.+-.+++.+.+ +++.|+-.+...|..=
T Consensus 220 ~iEqP~~~~--------------~~~~~---~~l~~~~~iP-I~~---de~i~~~~~~~~----~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 220 FIEQPTVSW--------------SIPAM---AHVREKVGIP-IVA---DQAAFTLYDVYE----ICRQRAADMICIGPRE 274 (384)
T ss_dssp EEECCSCTT--------------CHHHH---HHHHHHCSSC-EEE---STTCCSHHHHHH----HHHTTCCSEEEECHHH
T ss_pred EEeCCCChh--------------hHHHH---HHHHhhCCCC-EEE---eCCcCCHHHHHH----HHHcCCCCEEEEcchh
Confidence 665322211 11111 1222233443 432 333445554433 3445543344445555
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHH
Q 007056 256 ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTA 294 (620)
Q Consensus 256 ~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvA 294 (620)
+..+.+..++....++. ++++.+||-...+++++
T Consensus 275 ~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~i~~a 308 (384)
T 2pgw_A 275 IGGIQPMMKAAAVAEAA-----GLKICIHSSFTTGITTC 308 (384)
T ss_dssp HTSHHHHHHHHHHHHHT-----TCCEEECCCSCCHHHHH
T ss_pred hCCHHHHHHHHHHHHHC-----CCeEeeccCcCCHHHHH
Confidence 55666777777766654 25677777555555554
No 454
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=57.79 E-value=1.7e+02 Score=29.82 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=80.5
Q ss_pred HHHHHHHhHcCCCEEEEecC-----CCChhHHH-----HHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHh
Q 007056 101 LDIARQLAKLGVDIIEAGFP-----AASKEDFE-----AVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 170 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGfP-----~~s~~d~e-----~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 170 (620)
+++++...++|++.|-+.-+ .-||++|+ .+++|.+.++. ..+.-+|. ++...++.+.
T Consensus 193 ~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~---------~~iih~~g----~~~~~l~~~~ 259 (348)
T 4ay7_A 193 IIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNS---------VTVLHICG----NVNPILSDMA 259 (348)
T ss_dssp HHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSS---------EEEEECCS----CCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccC---------CcEEEecC----CcHHHHHHHH
Confidence 34556667899999999633 24677763 34556655421 12334443 3344566677
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCCEEE----EcCCC-CCCCCHHHHHHHHHHHHHcC
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-LGCDDVE----FSPED-AGRSDRKFLYEILGEVIKVG 244 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~-~G~~~V~----f~~ed-~~r~d~e~l~~~~~~~~~aG 244 (620)
+.|.+.+++--.+.+ ++.+|+ .|-+ +. ++|.. -...+++.+.+-++.+.+.|
T Consensus 260 ~~g~d~i~~d~~~~~---------------------~~~~k~~~g~~-~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~~~ 317 (348)
T 4ay7_A 260 DCGFEGLSVEEKIGS---------------------AKKGKEVIGTR-ARLVGNVSSPFTLLPGPVDKIKAEAKEALEGG 317 (348)
T ss_dssp TSCCSEEECCGGGCC---------------------HHHHHHHHTTS-SEEEEEECCCCCCTTCCHHHHHHHHHHHHHTT
T ss_pred HhccccccccchhhH---------------------HHHHHHHhCCC-EEEEcCCCChHhhcCCCHHHHHHHHHHHHhCC
Confidence 789888764222111 122332 3433 33 34421 22357888888888888888
Q ss_pred CcEEeecCCcc-ccCHHHHHHHHHHHHHh
Q 007056 245 ATTLNIPDTVG-ITMPTEFGKLIADIKAN 272 (620)
Q Consensus 245 a~~I~L~DTvG-~~~P~~v~~li~~l~~~ 272 (620)
-.++++.=.+- -..|+-+..+|+.+++.
T Consensus 318 g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 318 IDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 88888753332 23567799999988874
No 455
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=57.70 E-value=67 Score=33.62 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=17.1
Q ss_pred cHHHHHHHHHHcCCC----------CCHHHHHHHHHHHHH
Q 007056 420 GRHALKDRLKELGYE----------LNDEQLGTIFWHFKA 449 (620)
Q Consensus 420 G~~~i~~~l~~lG~~----------l~~~~~~~~~~~vk~ 449 (620)
+-..+++.|+.+|+. +++++.+++-+.+++
T Consensus 295 ~p~~vK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~ 334 (360)
T 4dpp_A 295 NPIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVKLVKE 334 (360)
T ss_dssp TTHHHHHHHHHHTSSCSEEETTCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 334677777777763 445555555444444
No 456
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=57.33 E-value=82 Score=33.32 Aligned_cols=130 Identities=18% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHH-cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHc-CCcEEeecCCcc-ccCHHHH-HHHHHHHHHhCCC
Q 007056 200 VEIARSMVKFARS-LGCDDVEFSPEDAGRSDRKFLYEILGEVIKV-GATTLNIPDTVG-ITMPTEF-GKLIADIKANTPG 275 (620)
Q Consensus 200 l~~~~~~v~~a~~-~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~a-Ga~~I~L~DTvG-~~~P~~v-~~li~~l~~~~~~ 275 (620)
.+.+.+.++++++ .|+..|.|+.-+..-...+.+.++++.+.+. +...|.+ -|.| ...|..+ .++++.|++. .
T Consensus 147 ~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i-~Tng~~~~p~~it~e~l~~L~~~-~- 223 (416)
T 2a5h_A 147 MERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI-GSRTPVVLPQRITPELVNMLKKY-H- 223 (416)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEE-ECSHHHHCGGGCCHHHHHHHGGG-C-
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEE-EecccccccccCCHHHHHHHHhc-C-
Q ss_pred CCceeEEEecCCCcch---HHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhcc
Q 007056 276 IENVVISTHCQNDLGL---STANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 334 (620)
Q Consensus 276 ~~~v~i~~H~HND~Gl---AvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~ 334 (620)
.+.|++|+-+...+ ...+...+.++|....-.++.=-|-----..+++++..+...+
T Consensus 224 --~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~GvNd~~e~l~~l~~~l~~lg 283 (416)
T 2a5h_A 224 --PVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIR 283 (416)
T ss_dssp --SEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTTTTCSHHHHHHHHHHHHHTT
T ss_pred --cEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECCCCCCHHHHHHHHHHHHHcC
No 457
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=57.31 E-value=1.9e+02 Score=30.17 Aligned_cols=165 Identities=14% Similarity=0.099 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
..+.++-.+-++.+.+.|++.|.+=.-.....|.+.++.+.+.++..+ ...+=+-.....++..+.++.+...+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~------~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADV------EILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTS------EEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCc------eEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 457888888999999999999988432223457888888888765321 11222222334455444556677778
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-H-cCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-S-LGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~-~-~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
+..|.=.++..+ ++ ..+.++ + .++. |.- |.+-.+++.+ +.+++.|+-.+..+
T Consensus 223 i~~iEqP~~~~d--------------~~----~~~~l~~~~~~iP-Ia~---dE~i~~~~~~----~~~i~~~~~d~v~i 276 (389)
T 3ozy_A 223 CYWFEEPLSIDD--------------IE----GHRILRAQGTPVR-IAT---GENLYTRNAF----NDYIRNDAIDVLQA 276 (389)
T ss_dssp CSEEESCSCTTC--------------HH----HHHHHHTTCCSSE-EEE---CTTCCHHHHH----HHHHHTTCCSEECC
T ss_pred CCEEECCCCccc--------------HH----HHHHHHhcCCCCC-EEe---CCCCCCHHHH----HHHHHcCCCCEEEe
Confidence 777653332211 11 122233 2 3332 332 3444454444 34455665445556
Q ss_pred CCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHH
Q 007056 252 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 296 (620)
Q Consensus 252 DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 296 (620)
|..=+.-..+..++.....+. ++++.+||. ..+++++-+
T Consensus 277 k~~~~GGit~~~~ia~~A~~~-----gi~~~~h~~-~~~i~~aa~ 315 (389)
T 3ozy_A 277 DASRAGGITEALAISASAASA-----HLAWNPHTF-NDIITVAAN 315 (389)
T ss_dssp CTTTSSCHHHHHHHHHHHHHT-----TCEECCCCT-TSHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHHc-----CCEEEecCC-CcHHHHHHH
Confidence 666666677777777776664 366777764 355555433
No 458
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=57.13 E-value=1.3e+02 Score=32.41 Aligned_cols=137 Identities=18% Similarity=0.261 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHH-HhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEe--ecccchhhHHHHHHHHh
Q 007056 94 TLTSKEKLDIARQ-LAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRCNERDIKTAWEAVK 170 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~-L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~--~~r~~~~dI~~a~eal~ 170 (620)
.+|.++-+++++. +++.++-.||=.++ ++||+..+.+.+.++..+ + |++ +...+.++++.+++.
T Consensus 280 ~~t~~Elid~y~~lle~ypIv~IEDPl~---~dD~eg~a~Lt~~lg~~i-------q-IvGDDl~vTn~~~i~~~Ie~-- 346 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPIISVEDPFD---QDDFASFSAFTKDVGEKT-------Q-VIGDDILVTNILRIEKALKD-- 346 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCEEEEECCSC---TTCHHHHHHHHHHHTTTS-------E-EEESTTTTTCHHHHHHHHHH--
T ss_pred cccHHHHHHHHHHHHhhhCceEEecCCC---hhhHHHHHHHHHhhCCCe-------E-EEeCccccCCHHHHHHHHhc--
Confidence 5899999999976 57899999998775 678999988888764321 2 333 334567888877764
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L 250 (620)
--.+.|.+ +.+ +.| -+-.+.++++.|++.|+. +.++. ..+.++..++.+ .++..++.-|-
T Consensus 347 -~a~n~IlI--Kvn------QIG-----gITEalka~~lA~~~G~~-vmvsh-rSGETeD~~iAd---LaVgl~~gqIK- 406 (452)
T 3otr_A 347 -KACNCLLL--KVN------QIG-----SVTEAIEACLLAQKSGWG-VQVSH-RSGETEDSFIAD---LVVGLRCGQIK- 406 (452)
T ss_dssp -TCCSEEEE--CHH------HHC-----CHHHHHHHHHHHHHTTCE-EEEEC-CSSCCSCCHHHH---HHHHTTCCEEE-
T ss_pred -CCCCEEEe--ecc------ccc-----cHHHHHHHHHHHHHcCCe-EEEeC-CCCCCchhHHHH---HHHHcCCCccc-
Confidence 12344433 211 111 145567889999999985 66655 233455556544 45667777776
Q ss_pred cCCccccCHHHHHHH
Q 007056 251 PDTVGITMPTEFGKL 265 (620)
Q Consensus 251 ~DTvG~~~P~~v~~l 265 (620)
|-+.+.-+++.++
T Consensus 407 --tGap~rsER~aKy 419 (452)
T 3otr_A 407 --SGSPCRSERLCKY 419 (452)
T ss_dssp --CCCSCSHHHHHHH
T ss_pred --cCCCcchhHHHHH
Confidence 3333455665543
No 459
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=57.12 E-value=24 Score=36.68 Aligned_cols=99 Identities=18% Similarity=0.178 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
.++.++ +++++.|.+.|++.||=-+| +.|++..+++++..+ +|...+=.-.+..+++..++. ..
T Consensus 199 ~~~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 262 (375)
T 1r0m_A 199 AYTLAD-AGRLRQLDEYDLTYIEQPLA---WDDLVDHAELARRIR---------TPLCLDESVASASDARKALAL---GA 262 (375)
T ss_dssp CCCGGG-HHHHHTTGGGCCSCEECCSC---TTCSHHHHHHHHHCS---------SCEEESTTCCSHHHHHHHHHH---TS
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCC---cccHHHHHHHHHhCC---------CCEEecCccCCHHHHHHHHHh---CC
Confidence 467888 99999999999999996544 466777777776532 132222111345666665553 24
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
.+.|.+ .. .+ ---+..+.++++.|+++|+. +..+.
T Consensus 263 ~d~v~i--k~---------~~--~GGit~~~~i~~~A~~~g~~-~~~~~ 297 (375)
T 1r0m_A 263 GGVINL--KV---------AR--VGGHAESRRVHDVAQSFGAP-VWCGG 297 (375)
T ss_dssp CSEEEE--CT---------TT--TTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCEEEE--Cc---------ch--hcCHHHHHHHHHHHHHcCCc-EEecC
Confidence 566654 11 11 11255677889999999986 44433
No 460
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=57.05 E-value=51 Score=34.79 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.++|+..||=-.| |++..+++++..+- |...+=.-....+++..++.
T Consensus 220 N~~w~~~~A~~~~~~l~~~~i~~iEqP~~-----d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 282 (398)
T 4dye_A 220 NAAWSVPDSVRAGIALEELDLEYLEDPCV-----GIEGMAQVKAKVRI---------PLCTNMCVVRFEDFAPAMRL--- 282 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSS-----HHHHHHHHHHHCCS---------CEEESSSCCSGGGHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEcCCCC-----CHHHHHHHHhhCCC---------CEEeCCcCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +...+
T Consensus 283 ~a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 319 (398)
T 4dye_A 283 NAVDVIHG-------------DVYKWGGIAATKALAAHCETFGLG-MNLHS 319 (398)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECC
T ss_pred CCCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCe-EEEcC
No 461
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=56.79 E-value=68 Score=32.93 Aligned_cols=74 Identities=19% Similarity=0.168 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecC--Cc-c-------ccCHHHHHH---HHHHHHHhCCCCCceeEEEecCCCcchHH
Q 007056 227 RSDRKFLYEILGEVIKVGATTLNIPD--TV-G-------ITMPTEFGK---LIADIKANTPGIENVVISTHCQNDLGLST 293 (620)
Q Consensus 227 r~d~e~l~~~~~~~~~aGa~~I~L~D--Tv-G-------~~~P~~v~~---li~~l~~~~~~~~~v~i~~H~HND~GlAv 293 (620)
..+++.+++.++...+.||+.|-+.= |. | +...+|+.+ .|+.+++.. +++|++=.=+ .
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~----~vpISIDT~~-----~ 115 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF----PQLISVDTSR-----P 115 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC----CSEEEEECSC-----H
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC----CCeEEEeCCC-----H
Confidence 35788999999999999999887762 32 2 112455444 456666654 3788875443 3
Q ss_pred HHHHHHHHhcCcEEee
Q 007056 294 ANTIAGACAGARQVEV 309 (620)
Q Consensus 294 ANslaAv~aGA~~Vd~ 309 (620)
.-+.+|+++||+.|+-
T Consensus 116 ~Va~aAl~aGa~iIND 131 (314)
T 3tr9_A 116 RVMREAVNTGADMIND 131 (314)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4457889999999965
No 462
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=56.59 E-value=75 Score=34.10 Aligned_cols=196 Identities=17% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCEEEEEecC-CH---HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCC----------
Q 007056 162 IKTAWEAVKYAKRPRIHTFIAT-SG---IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR---------- 227 (620)
Q Consensus 162 I~~a~eal~~ag~~~v~i~~~~-Sd---~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r---------- 227 (620)
+.+.++.+..+|+..|||-..+ ++ -|+.-+-=.+.+|.++++..+...+...|.+.|...=-|+--
T Consensus 165 v~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~ 244 (429)
T 1f8m_A 165 VYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDE 244 (429)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccc
Q ss_pred -------------------CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCC
Q 007056 228 -------------------SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND 288 (620)
Q Consensus 228 -------------------~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND 288 (620)
...+..++-+++..+ |||.|.+. .|.-.++++.++.+.++..+| ...+..=+--.
T Consensus 245 ~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P---~~~La~n~sPs 318 (429)
T 1f8m_A 245 RDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYP---DQMLAYNCSPS 318 (429)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCT---TCEEEEECCTT
T ss_pred cccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCC---CceeecCCCCC
Q ss_pred cc----------hHHHHHHHHHHhcCcEEeeccccccCCcCcccHHHHHHHHHhccccccCccccCCChhhHHHHHHHHH
Q 007056 289 LG----------LSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 358 (620)
Q Consensus 289 ~G----------lAvANslaAv~aGA~~Vd~Ti~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~ 358 (620)
+. .-...-|+. .|..++=.++.| =|+-+.++++++..+...|. ..... ..-.++-.
T Consensus 319 f~w~~~~~~~~~~~f~~eL~~--lG~~~v~~~l~~--~raa~~a~~~~a~~~~~~G~---------~ay~e-~Q~~e~~~ 384 (429)
T 1f8m_A 319 FNWKKHLDDATIAKFQKELAA--MGFKFQFITLAG--FHALNYSMFDLAYGYAQNQM---------SAYVE-LQEREFAA 384 (429)
T ss_dssp SCHHHHCCHHHHHHHHHHHHH--HTEEEEEETTHH--HHHHHHHHHHHHHHHHHHTH---------HHHHH-HHHHHHHH
T ss_pred CCcccccchhhHhHHHHHHHH--cCCeEEEECcHH--HHHHHHHHHHHHHHHHHcCC---------hHHHH-HhHHHHhh
Q ss_pred HHhCCCCCCCCcccCccce
Q 007056 359 EYTGLHVQPHKAIVGANAF 377 (620)
Q Consensus 359 ~~~g~~v~~~~pivG~naF 377 (620)
+..|+..-.++..+|.+.|
T Consensus 385 ~~~g~~~~~hq~~~G~~~~ 403 (429)
T 1f8m_A 385 EERGYTATKHQREVGAGYF 403 (429)
T ss_dssp GGGTCCTTSHHHHTTHHHH
T ss_pred hccCcchhhhhhhhccchH
No 463
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=56.50 E-value=1.2e+02 Score=31.63 Aligned_cols=126 Identities=18% Similarity=0.198 Sum_probs=67.6
Q ss_pred HHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEEEE
Q 007056 101 LDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHT 179 (620)
Q Consensus 101 l~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v~i 179 (620)
.+.++.|.++|+|.|++..+.-.+. -.+.++.+.+..+ .+.+.+-. ...++.+.+. .+|++.|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~---------~~Vivg~v-~t~e~A~~l~----~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMN---------IDVIVGNV-VTEEATKELI----ENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCC---------CEEEEEEE-CSHHHHHHHH----HTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcC---------CcEEEccC-CCHHHHHHHH----HcCcCEEEE
Confidence 6678888999999999965543333 2466777766531 13343322 2344444433 469998877
Q ss_pred EecCCHHHHHH-H--hCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 180 FIATSGIHMEH-K--LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 180 ~~~~Sd~h~~~-~--l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
-...-.++..+ . .+.. .+..+.++.+.++..++. |.- +++=.+++.+.+ +..+||+.+.+.
T Consensus 173 G~~~Gs~~~tr~~~g~g~p---~~~~i~~v~~~~~~~~iP-VIA---~GGI~~~~di~k----ala~GAd~V~vG 236 (361)
T 3khj_A 173 GIGPGSICTTRIVAGVGVP---QITAIEKCSSVASKFGIP-IIA---DGGIRYSGDIGK----ALAVGASSVMIG 236 (361)
T ss_dssp CSSCCTTCCHHHHTCBCCC---HHHHHHHHHHHHHHHTCC-EEE---ESCCCSHHHHHH----HHHHTCSEEEES
T ss_pred ecCCCcCCCcccccCCCCC---cHHHHHHHHHHHhhcCCe-EEE---ECCCCCHHHHHH----HHHcCCCEEEEC
Confidence 32111111111 1 1222 234455555556666665 432 344455555443 345799888754
No 464
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=56.49 E-value=57 Score=32.65 Aligned_cols=20 Identities=20% Similarity=-0.047 Sum_probs=14.1
Q ss_pred HHHHHHhHcCCCEEEEecCC
Q 007056 102 DIARQLAKLGVDIIEAGFPA 121 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~ 121 (620)
+-++.+.++|++.|-+-.+.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHCCCCEEEEEEec
Confidence 44566777899988885444
No 465
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=56.26 E-value=2.4e+02 Score=31.14 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=30.8
Q ss_pred eEEEeCCC---cccCCCCCCCC-CHHHHHHHHHHHhHcC-----CCEEEEec
Q 007056 77 VRVFDTTL---RDGEQSPGATL-TSKEKLDIARQLAKLG-----VDIIEAGF 119 (620)
Q Consensus 77 V~I~DtTL---RDG~Qs~g~~f-s~~~Kl~Ia~~L~~~G-----vd~IEvGf 119 (620)
+=|+-+|. =||.+ .+ +.+..++.++.+.+.| .++|.+|.
T Consensus 228 MGIlNvTPDSFsDGG~----~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGg 275 (545)
T 2bmb_A 228 MAIFNATPDSFSDGGE----HFADIESQLNDIIKLCKDALYLHESVIIDVGG 275 (545)
T ss_dssp EEEEECSCSSTTTTTT----TTTCHHHHHHHHHHHHHHHHTTCSCEEEEEEC
T ss_pred EEEEeCCCCCCcCCCc----CcCCHHHHHHHHHHHHHcCCCCCCceEEEECC
Confidence 34666664 46554 34 8999999999999999 99999995
No 466
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=56.22 E-value=13 Score=36.04 Aligned_cols=68 Identities=16% Similarity=0.099 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCcEEeecCCcccc--CHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..++++.+.++|++.|.+.|-.|.. .+. . ++++.+++.+ ++|+.+|.--.. ......++++||+.|..
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~-~-~~i~~i~~~~----~ipv~v~ggI~~---~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDN-R-ALIAEVAQAM----DIKVELSGGIRD---DDTLAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCC-H-HHHHHHHHHC----SSEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCCh-H-HHHHHHHHhc----CCcEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 3466788888999999998754432 222 2 7888888876 367887754322 23467788899998853
No 467
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=56.16 E-value=34 Score=35.85 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.++|+..||=-.| +.|++..+++++...- |...+=.-....+++..++.
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iEeP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 285 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIEEPVP---QENLSGHAAVRERSEI---------PIQAGENWWFPRGFAEAIAA--- 285 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHCSS---------CEEECTTCCHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCC---cchHHHHHHHHhhcCC---------CEEeCCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +.....
T Consensus 286 ~a~d~v~i-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 323 (383)
T 3toy_A 286 GASDFIMP-------------DLMKVGGITGWLNVAGQADAASIP-MSSHIL 323 (383)
T ss_dssp TCCSEECC-------------CTTTTTHHHHHHHHHHHHHHHTCC-BCCCSC
T ss_pred CCCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCE-EeecCH
No 468
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=56.16 E-value=88 Score=29.69 Aligned_cols=196 Identities=12% Similarity=0.116 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 173 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag 173 (620)
|-.+-...+-+.+.+.|++.+-.- ....++ +.+.++.+... .+. ++ .+.. ....... ++.+...+
T Consensus 17 ~~~~~~~gi~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~---~vd---gi--i~~~-~~~~~~~----~~~l~~~~ 82 (275)
T 3d8u_A 17 ACAHFLPSFQQALNKAGYQLLLGY-SDYSIEQEEKLLSTFLES---RPA---GV--VLFG-SEHSQRT----HQLLEASN 82 (275)
T ss_dssp HHHHHHHHHHHHHHHTSCEECCEE-CTTCHHHHHHHHHHHHTS---CCC---CE--EEES-SCCCHHH----HHHHHHHT
T ss_pred cHHHHHHHHHHHHHHCCCEEEEEc-CCCCHHHHHHHHHHHHhc---CCC---EE--EEeC-CCCCHHH----HHHHHhCC
Confidence 445566667778888998654332 112222 23444444331 111 21 1211 1112222 33334457
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE-cCCCCCCCCHHHHHHHHHHHHHcCCc--EEee
Q 007056 174 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGAT--TLNI 250 (620)
Q Consensus 174 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f-~~ed~~r~d~e~l~~~~~~~~~aGa~--~I~L 250 (620)
++.|.+-....+.. ......+. .+....+++++.++|...+.| +.........+...-+.+++.+.|.. ...+
T Consensus 83 iPvV~~~~~~~~~~-~~~V~~d~---~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~ 158 (275)
T 3d8u_A 83 TPVLEIAELSSKAS-YLNIGVDH---FEVGKACTRHLIEQGFKNVGFIGARGNHSTLQRQLHGWQSAMIENYLTPDHFLT 158 (275)
T ss_dssp CCEEEESSSCSSSS-SEEECBCH---HHHHHHHHHHHHTTTCCCEEEEECSCSSHHHHHHHHHHHHHHHHTTCCCCCEEE
T ss_pred CCEEEEeeccCCCC-CCEEEECh---HHHHHHHHHHHHHCCCCeEEEEcCCCCCchHHHHHHHHHHHHHHcCCCCCccEE
Confidence 88775532211100 01123332 345566778888888766655 33212222345566666777777753 2222
Q ss_pred cCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcE-Eeecccccc
Q 007056 251 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 315 (620)
Q Consensus 251 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Ti~GlG 315 (620)
. .+-..+....+.+..+.+..|+.+ .+-|.||. +|..-..++-+.|.+. =|.+|.|++
T Consensus 159 ~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~vP~di~vvg~d 217 (275)
T 3d8u_A 159 T--HEAPSSQLGAEGLAKLLLRDSSLN----ALVCSHEE-IAIGALFECHRRVLKVPTDIAIICLE 217 (275)
T ss_dssp C--SSCCCHHHHHHHHHHHHTTCTTCC----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred E--eCCCChhHHHHHHHHHHhCCCCCC----EEEEcCcH-HHHHHHHHHHHcCCCCCCceEEEecC
Confidence 1 134567777777777666544322 44577764 4444444445677652 256777765
No 469
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=56.13 E-value=27 Score=37.25 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=63.6
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..++.++-+++++.|.++|++.||--.| +.+++..+++++... +|.+.+=.-....+++..++. .
T Consensus 235 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---g 299 (424)
T 3v3w_A 235 HRLTPIEAARLGKALEPYHLFWMEDAVP---AENQESFKLIRQHTT---------TPLAVGEVFNSIHDCRELIQN---Q 299 (424)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCSC---CSSTTHHHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC---hHhHHHHHHHHhhCC---------CCEEEccCcCCHHHHHHHHHc---C
Confidence 3579999999999999999999997544 345667777776532 133322111245666665543 2
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
.++.|.+ +.++---+..+.++++.|+++|+. +...+
T Consensus 300 a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 335 (424)
T 3v3w_A 300 WIDYIRT-------------TIVHAGGISQMRRIADFASLFHVR-TGFHG 335 (424)
T ss_dssp CCSEECC-------------CTTTTTHHHHHHHHHHHHHTTTCE-EEECC
T ss_pred CCCeEee-------------cchhcCCHHHHHHHHHHHHHcCCE-EEecC
Confidence 3555432 111223356677889999999985 55543
No 470
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=56.11 E-value=77 Score=30.52 Aligned_cols=198 Identities=7% Similarity=-0.024 Sum_probs=100.3
Q ss_pred CCCHHHHHHHHHHHhHc-CCCEEEE--ecCCCChh-HHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHH
Q 007056 94 TLTSKEKLDIARQLAKL-GVDIIEA--GFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 169 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~-Gvd~IEv--GfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal 169 (620)
.|-.+-...+-+.+.+. |+..+=. .+....++ ..+.++.+... .+ ..|..+ .......+..++.+
T Consensus 22 ~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~---~v-------dgiii~-~~~~~~~~~~~~~~ 90 (304)
T 3gbv_A 22 EYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEE---QP-------DGVMFA-PTVPQYTKGFTDAL 90 (304)
T ss_dssp SHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTT---CC-------SEEEEC-CSSGGGTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhc---CC-------CEEEEC-CCChHHHHHHHHHH
Confidence 45566667777788887 7664433 23322332 23445554432 11 112222 12222334444445
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC--CEEEE-c----CCCCCCCCHHHHHHHHHHHHH
Q 007056 170 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC--DDVEF-S----PEDAGRSDRKFLYEILGEVIK 242 (620)
Q Consensus 170 ~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~--~~V~f-~----~ed~~r~d~e~l~~~~~~~~~ 242 (620)
...+++.|.+-....+.........+ +.+....+++++.+.|. ..|.| . .........+.+.-+.+++.+
T Consensus 91 ~~~~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~ 167 (304)
T 3gbv_A 91 NELGIPYIYIDSQIKDAPPLAFFGQN---SHQSGYFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQE 167 (304)
T ss_dssp HHHTCCEEEESSCCTTSCCSEEEECC---HHHHHHHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEEeCCCCCCCceEEEecC---hHHHHHHHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHh
Confidence 55588877654322211000112233 33456677888888876 66655 2 111222334666667777778
Q ss_pred cCCc--EEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecccccc
Q 007056 243 VGAT--TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 315 (620)
Q Consensus 243 aGa~--~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti~GlG 315 (620)
.|.+ .+.+. .+...++...+.+..+.+..|+.+ .+=|.||..+++..+ .-+.|- =|.+|.|++
T Consensus 168 ~g~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~a~g~~~a--l~~~g~--~di~vig~d 232 (304)
T 3gbv_A 168 HHPACNILELN--LHADLNIEDSRMLDDFFREHPDVK----HGITFNSKVYIIGEY--LQQRRK--SDFSLIGYD 232 (304)
T ss_dssp HCTTSEEEEEE--EESSCSSCHHHHHHHHHHHCTTCC----EEEESSSCTHHHHHH--HHHTTC--CSCEEEEES
T ss_pred hCCCcEEEEee--ecCCCHHHHHHHHHHHHHhCCCeE----EEEEcCcchHHHHHH--HHHcCC--CCcEEEEeC
Confidence 8754 22221 122344455666666665555432 555888874444444 445676 467787765
No 471
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=56.10 E-value=1.5e+02 Score=28.87 Aligned_cols=171 Identities=11% Similarity=0.045 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccc-hhhHHHHHHHHhcCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYAKR 174 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~ag~ 174 (620)
+.++-+++++.+.. .+..+++|.+-.-..-.+.++.|.+. +. ..+.-+-+.. .+-+..+.+.+...|+
T Consensus 19 ~~~~al~l~~~~~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~-g~---------~iflDlK~~DI~nTv~~~~~~~~~~ga 87 (239)
T 3tr2_A 19 TVEQARAQINPLTP-ELCHLKIGSILFTRYGPAFVEELMQK-GY---------RIFLDLKFYDIPQTVAGACRAVAELGV 87 (239)
T ss_dssp SHHHHHHHHTTCCT-TTCEEEEEHHHHHHHHHHHHHHHHHT-TC---------CEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCC-cccEEEeCHHHHHhhCHHHHHHHHhc-CC---------CEEEEecccccchHHHHHHHHHHhCCC
Confidence 56666666666533 37899999764222224567777653 11 2455544432 2223445566677899
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC---CCE-EEE---cCCC-------CCCCC-HHHHHHHHHH
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG---CDD-VEF---SPED-------AGRSD-RKFLYEILGE 239 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G---~~~-V~f---~~ed-------~~r~d-~e~l~~~~~~ 239 (620)
+.+.+..... .+++..+++.+++.+ ... +.. .-.+ ....+ .+.+.++++.
T Consensus 88 d~vTvh~~~G---------------~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~ 152 (239)
T 3tr2_A 88 WMMNIHISGG---------------RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATL 152 (239)
T ss_dssp SEEEEEGGGC---------------HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHH
T ss_pred CEEEEeccCC---------------HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9877654332 234555666666543 111 111 1111 11112 3677778888
Q ss_pred HHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeE--EEecCCCcchH------HHHHHHHHHhcCcEE
Q 007056 240 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVI--STHCQNDLGLS------TANTIAGACAGARQV 307 (620)
Q Consensus 240 ~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i--~~H~HND~GlA------vANslaAv~aGA~~V 307 (620)
+.++|.+-+. +.|.+.. .+|+..++. -+.+ |+-. -|-+ ++|.-.|+++||+.+
T Consensus 153 a~~~g~~GvV-------~s~~e~~----~ir~~~~~~-fl~vtPGIr~---~g~~~~dQ~rv~t~~~~~~aGad~l 213 (239)
T 3tr2_A 153 AKSAGLDGVV-------CSAQEAA----LLRKQFDRN-FLLVTPGIRL---ETDEKGDQKRVMTPRAAIQAGSDYL 213 (239)
T ss_dssp HHHHTCCEEE-------CCHHHHH----HHHTTCCTT-SEEEECCBC-------------CCBCHHHHHHHTCSEE
T ss_pred HHHcCCCEEE-------ECchhHH----HHHHhcCCC-cEEECCCcCC---CCCCcCcccccCCHHHHHHcCCCEE
Confidence 8888988775 4466654 356655431 1111 2222 1212 235677899999975
No 472
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=56.04 E-value=45 Score=36.36 Aligned_cols=69 Identities=22% Similarity=0.183 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEeecc
Q 007056 234 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 311 (620)
Q Consensus 234 ~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Ti 311 (620)
.+.++++.++|++.|.|-=+.| .+..+.+.|+++++.+|+ ++|.+- ......-+..++++||+.|....
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPH---LEIIGG----NVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---CCEEEE----EECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCC---ceEEEc----ccCcHHHHHHHHHhCCCEEEECC
Confidence 4667788889999887754433 446788999999999975 445441 12234557888999999998543
No 473
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=56.04 E-value=28 Score=36.40 Aligned_cols=116 Identities=10% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||-.+| +.|++..+++++ ....-|++=.+.. +.+.+.+.+..
T Consensus 216 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~----------~~~iPI~~dE~~~--~~~~~~~~i~~ 280 (388)
T 2nql_A 216 HWNQTPERALELIAEMQPFDPWFAEAPVW---TEDIAGLEKVSK----------NTDVPIAVGEEWR--THWDMRARIER 280 (388)
T ss_dssp CSCSCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHT----------SCCSCEEECTTCC--SHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEECCCC---hhhHHHHHHHHh----------hCCCCEEEeCCcC--CHHHHHHHHHc
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHH
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 237 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~ 237 (620)
..++.|.+ +..+ --+..+.+++++|+++|+. +..+....+.........++
T Consensus 281 ~~~d~v~i-------------k~~~-GGit~~~~i~~~A~~~g~~-~~~h~~~es~i~~aa~~hla 331 (388)
T 2nql_A 281 CRIAIVQP-------------EMGH-KGITNFIRIGALAAEHGID-VIPHATVGAGIFLAASLQAS 331 (388)
T ss_dssp SCCSEECC-------------CHHH-HCHHHHHHHHHHHHHHTCE-ECCCCCSSCSHHHHHHHHHH
T ss_pred CCCCEEEe-------------cCCC-CCHHHHHHHHHHHHHcCCe-EEeecCCCcHHHHHHHHHHH
No 474
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=56.03 E-value=1.1e+02 Score=30.56 Aligned_cols=18 Identities=6% Similarity=-0.265 Sum_probs=13.7
Q ss_pred HHHHHhHcCCCEEEEecC
Q 007056 103 IARQLAKLGVDIIEAGFP 120 (620)
Q Consensus 103 Ia~~L~~~Gvd~IEvGfP 120 (620)
-++.+.++|++.|-+-.+
T Consensus 85 ~i~~a~~ag~~~v~i~~~ 102 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFGA 102 (298)
T ss_dssp HHHHHHHTTCSEEEEEEE
T ss_pred hHHHHHHCCCCEEEEEec
Confidence 366777889999988544
No 475
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=56.01 E-value=52 Score=31.89 Aligned_cols=119 Identities=10% Similarity=0.074 Sum_probs=69.0
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc--CC--CCCCCCH-----
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE--DAGRSDR----- 230 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~--~e--d~~r~d~----- 230 (620)
.+++..++.++..|.+.|.+...... ... + ..+.+..+.+++.|+..+.+. +. +....++
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~-------~~~-~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~ 85 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFH-------NLS-D---AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDA 85 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGG-------GSC-H---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHH
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCcc-------ccc-h---hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHH
Confidence 45677777778889999998754211 011 1 234566677888998632222 11 1222232
Q ss_pred --HHHHHHHHHHHHcCCcEEeecC-C-ccc-------cCHHHHHHHHHHHHHhCC--CCCceeEEEecCCCc
Q 007056 231 --KFLYEILGEVIKVGATTLNIPD-T-VGI-------TMPTEFGKLIADIKANTP--GIENVVISTHCQNDL 289 (620)
Q Consensus 231 --e~l~~~~~~~~~aGa~~I~L~D-T-vG~-------~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~ 289 (620)
+++.+.++.+.+.|+..|..+= + .|. ........+++.+++-.+ ...++.|.+|.|+.+
T Consensus 86 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 157 (290)
T 2qul_A 86 GTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRF 157 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccc
Confidence 6788888999999999887531 1 132 334445555555443110 001478999999853
No 476
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=56.01 E-value=17 Score=36.94 Aligned_cols=179 Identities=13% Similarity=0.102 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHHHhHc----CCCEE-EEec---CCCChhH---------HHHHHHHHHHhcccccccCCccceEEeeccc
Q 007056 95 LTSKEKLDIARQLAKL----GVDII-EAGF---PAASKED---------FEAVRTIAKEVGNAVDAESGYVPVICGLSRC 157 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~----Gvd~I-EvGf---P~~s~~d---------~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~ 157 (620)
=+.++-+++|+.|.++ |+..+ =.+| |..++.- .+.+++++++. |+ +.++- -.
T Consensus 31 e~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--------Gl-p~~Te--v~ 99 (285)
T 3sz8_A 31 ESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--------GV-PVITD--VH 99 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--------CC-CEEEE--CC
T ss_pred CCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--------CC-eEEEE--eC
Confidence 3789999999999875 46644 3333 5666532 23333344332 22 12211 12
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHH
Q 007056 158 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 237 (620)
Q Consensus 158 ~~~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~ 237 (620)
....++.. .+. ++.+.| ++.+... .+ .++++...|+. |.++- +.-.+++.+...+
T Consensus 100 d~~~v~~l----~~~-vd~lqI--gA~~~~n-----------~~----LLr~va~~gkP-VilK~--G~~~t~~ei~~av 154 (285)
T 3sz8_A 100 EAEQAAPV----AEI-ADVLQV--PAFLARQ-----------TD----LVVAIAKAGKP-VNVKK--PQFMSPTQLKHVV 154 (285)
T ss_dssp SGGGHHHH----HTT-CSEEEE--CGGGTTC-----------HH----HHHHHHHTSSC-EEEEC--CTTSCGGGTHHHH
T ss_pred CHHHHHHH----HHh-CCEEEE--CccccCC-----------HH----HHHHHHccCCc-EEEeC--CCCCCHHHHHHHH
Confidence 34444433 233 666655 3322111 11 44445567875 77743 1123555566777
Q ss_pred HHHHHcCCcEEeecCCccccCHHH-H--HHHHHHHHHhCCCCCceeEEE-ecCCC----------cc---hHHHHHHHHH
Q 007056 238 GEVIKVGATTLNIPDTVGITMPTE-F--GKLIADIKANTPGIENVVIST-HCQND----------LG---LSTANTIAGA 300 (620)
Q Consensus 238 ~~~~~aGa~~I~L~DTvG~~~P~~-v--~~li~~l~~~~~~~~~v~i~~-H~HND----------~G---lAvANslaAv 300 (620)
+.+.+.|.+.|.||.-.-...+.. + -.-|..+++.+++ ++|++ ..|-- .| +-..-+++|+
T Consensus 155 e~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~---~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv 231 (285)
T 3sz8_A 155 SKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGG---CPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGI 231 (285)
T ss_dssp HHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTS---CCEEEETTTTCC---------------HHHHHHHHH
T ss_pred HHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCC---CCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHH
Confidence 777888988888886433221111 0 2245567887753 56887 67751 22 3366789999
Q ss_pred HhcCc--EEeeccc
Q 007056 301 CAGAR--QVEVTIN 312 (620)
Q Consensus 301 ~aGA~--~Vd~Ti~ 312 (620)
.+||+ .|+.=..
T Consensus 232 A~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 232 AVGIAGLFLEAHPD 245 (285)
T ss_dssp HHCCSEEEEEEESC
T ss_pred HhCCCEEEEEeccC
Confidence 99999 6755444
No 477
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=55.95 E-value=1.9e+02 Score=29.98 Aligned_cols=163 Identities=16% Similarity=0.158 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 175 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~ 175 (620)
+.++-.+-++.+.+.|++.|++-....-..|.+.++.+.+.++..+ . ..+-+-.....++....++.+...++.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avR~a~g~d~----~--l~vDan~~~~~~~a~~~~~~l~~~~i~ 218 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMVAEVRRAVGDDV----D--LFIDINGAWTYDQALTTIRALEKYNLS 218 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHHHHHHHHHCTTS----C--EEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHHHHHHHhhCCCC----E--EEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 5677777788888889999998432222346788888887664321 1 122222233344444445566666776
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC-CcEEeecCCc
Q 007056 176 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 254 (620)
Q Consensus 176 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG-a~~I~L~DTv 254 (620)
.|.-.++..+ ++ .+.+..+..++. |.- |.+-.+++.+.++ ++.| +|.|++ |..
T Consensus 219 ~iEqP~~~~~--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~~----i~~~~~d~v~i-k~~ 272 (397)
T 2qde_A 219 KIEQPLPAWD--------------LD---GMARLRGKVATP-IYA---DESAQELHDLLAI----INKGAADGLMI-KTQ 272 (397)
T ss_dssp CEECCSCTTC--------------HH---HHHHHHTTCSSC-EEE---STTCCSHHHHHHH----HHHTCCSEEEE-CHH
T ss_pred EEECCCChhh--------------HH---HHHHHHhhCCCC-EEE---eCCcCCHHHHHHH----HHcCCCCEEEE-ecc
Confidence 6543222211 11 111222223443 332 3444555544443 3444 555554 444
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHH
Q 007056 255 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 295 (620)
Q Consensus 255 G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 295 (620)
=+.-..+..+++...++. ++++.+||--..|++++-
T Consensus 273 ~~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~ig~aa 308 (397)
T 2qde_A 273 KAGGLLKAQRWLTLARLA-----NLPVICGCMVGSGLEASP 308 (397)
T ss_dssp HHTSHHHHHHHHHHHHHH-----TCCEEECCCSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHc-----CCeEEEecCcccHHHHHH
Confidence 334455566666666654 256787876666665553
No 478
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=55.91 E-value=27 Score=33.72 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+++.+.++++++.+.|++.|-+-... |. -.+.++.+++.+|+ +.++... . +-.-..-.|+++||+.|
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k~----~~-~~~~i~~l~~~~~~---~~vgagt---v-i~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLRT----EC-AVDAIRAIAKEVPE---AIVGAGT---V-LNPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESCS----TT-HHHHHHHHHHHCTT---SEEEEES---C-CSHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----hh-HHHHHHHHHHHCcC---CEEeeCE---E-EEHHHHHHHHHcCCCEE
Confidence 345678899999999999998888653 32 35688888888874 4555432 1 22367788999999999
Q ss_pred e
Q 007056 308 E 308 (620)
Q Consensus 308 d 308 (620)
+
T Consensus 93 ~ 93 (214)
T 1wbh_A 93 I 93 (214)
T ss_dssp E
T ss_pred E
Confidence 7
No 479
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=55.85 E-value=1.8e+02 Score=29.70 Aligned_cols=162 Identities=12% Similarity=0.128 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHH-HHHHHHhcCCC
Q 007056 96 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK-TAWEAVKYAKR 174 (620)
Q Consensus 96 s~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~-~a~eal~~ag~ 174 (620)
+.++-.+-++.+.+.|++.|++-.......|.+.++.+.+.++..+ ...+-+-.....++.. ..++.+...++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~------~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERVGNDI------AIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHHCTTS------EEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHhCCCC------eEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 5677777788888899999998432222346788888887764321 1122222222333433 33444555566
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcC-CcEEeecCC
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDT 253 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aG-a~~I~L~DT 253 (620)
..|.=.++..+ ++ .+.+..+..++. |.- |.+-++++.+.+++ +.| +|.|. .|.
T Consensus 215 ~~iEqP~~~~d--------------~~---~~~~l~~~~~iP-I~~---dE~~~~~~~~~~~i----~~~~~d~v~-ik~ 268 (369)
T 2p8b_A 215 DWIEQPVIADD--------------ID---AMAHIRSKTDLP-LMI---DEGLKSSREMRQII----KLEAADKVN-IKL 268 (369)
T ss_dssp SCEECCBCTTC--------------HH---HHHHHHHTCCSC-EEE---STTCCSHHHHHHHH----HHTCCSEEE-ECH
T ss_pred cEEECCCCccc--------------HH---HHHHHHHhCCCC-EEe---CCCCCCHHHHHHHH----HhCCCCEEE-eec
Confidence 65542222111 11 111222233443 432 34446666555444 344 55554 444
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHH
Q 007056 254 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTA 294 (620)
Q Consensus 254 vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvA 294 (620)
.=+..+.+..++....+++ ++++.+||....+.+++
T Consensus 269 ~~~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~i~~~ 304 (369)
T 2p8b_A 269 MKCGGIYPAVKLAHQAEMA-----GIECQVGSMVESSVASS 304 (369)
T ss_dssp HHHTSHHHHHHHHHHHHHT-----TCEEEECCSSCCHHHHH
T ss_pred chhCCHHHHHHHHHHHHHc-----CCcEEecCCCccHHHHH
Confidence 4444556666766666654 35666676554555544
No 480
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=55.83 E-value=1.6e+02 Score=30.41 Aligned_cols=145 Identities=10% Similarity=0.138 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhHcCCCEEEEecC---CCChhHHH-----HHHHHHHHhcccccccCC-ccceEEeecccchhhHHHHHHH
Q 007056 98 KEKLDIARQLAKLGVDIIEAGFP---AASKEDFE-----AVRTIAKEVGNAVDAESG-YVPVICGLSRCNERDIKTAWEA 168 (620)
Q Consensus 98 ~~Kl~Ia~~L~~~Gvd~IEvGfP---~~s~~d~e-----~v~~i~~~~~~~~~~~~~-l~~~i~~~~r~~~~dI~~a~ea 168 (620)
+.-+++++.+.++|++.|-+.-+ .-||++|+ ..++|.+.+.... .+ -++ +..++..... .++.
T Consensus 197 ~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~---~g~~~p-vi~f~~g~~~----~l~~ 268 (368)
T 4exq_A 197 QAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREH---DGARVP-AIAFTKGGGL----WLED 268 (368)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEE---TTEECC-EEEEETTCGG----GHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhc---CCCCCc-EEEEcCCcHH----HHHH
Confidence 33445566667899999987422 34677763 4566666543210 01 123 3345543322 2344
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-EE--EEcCCCCCCCCHHHHHHHHHHHHHc-C
Q 007056 169 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DV--EFSPEDAGRSDRKFLYEILGEVIKV-G 244 (620)
Q Consensus 169 l~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~-~V--~f~~ed~~r~d~e~l~~~~~~~~~a-G 244 (620)
+.+.|.+.+++--. .+.++. + +..|-+ .+ .++|.- -..+++.+.+-++.+++. |
T Consensus 269 l~~~g~d~i~~d~~-----------~dl~~a----k------~~~g~~~~l~Gnldp~~-L~gt~e~I~~~v~~~l~~~g 326 (368)
T 4exq_A 269 LAATGVDAVGLDWT-----------VNLGRA----R------ERVAGRVALQGNLDPTI-LFAPPEAIRAEARAVLDSYG 326 (368)
T ss_dssp HHTSSCSEEECCTT-----------SCHHHH----H------HHHTTSSEEEEEECGGG-GGSCHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCEEeeCCC-----------CCHHHH----H------HHhCCCEEEEECCCHHH-hCCCHHHHHHHHHHHHHHhC
Confidence 56678888765211 222221 1 112322 11 233421 235677777777666654 3
Q ss_pred ---CcEEeecCCcc-ccCHHHHHHHHHHHHHh
Q 007056 245 ---ATTLNIPDTVG-ITMPTEFGKLIADIKAN 272 (620)
Q Consensus 245 ---a~~I~L~DTvG-~~~P~~v~~li~~l~~~ 272 (620)
-.++++.-.+- -..|+.+..+++.+++.
T Consensus 327 ~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 327 NHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp SCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 24555533332 23566677777777653
No 481
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=55.79 E-value=38 Score=32.73 Aligned_cols=70 Identities=11% Similarity=0.059 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCcEEeecCCccccC-HHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEEee
Q 007056 233 LYEILGEVIKVGATTLNIPDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 309 (620)
Q Consensus 233 l~~~~~~~~~aGa~~I~L~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 309 (620)
..++++.+.++|++.|.+.|-.+... .....++++.+++.+ ++||-+|.--.. ......++++||+.|..
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~----~ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI----DIPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC----CSCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC----CCCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 44667888899999999888765532 223456778888765 366777644322 34577778899998843
No 482
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=55.64 E-value=26 Score=36.24 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=61.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecc-cchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 172 (620)
.++.++ +++++.|.+.|++.||=-+| +.|++..+++.+... +| |++=.+ ....+++..++. .
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------ip-Ia~dE~~~~~~~~~~~i~~---~ 255 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIEQPLE---EEDVLGHAELARRIQ---------TP-ICLDESIVSARAAADAIKL---G 255 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEECCSC---TTCHHHHHHHHTTCS---------SC-EEESTTCCSHHHHHHHHHT---T
T ss_pred CCCHHH-HHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHHhCC---------CC-EEECCCcCCHHHHHHHHHc---C
Confidence 468899 99999999999999996443 466777877776421 13 222222 234556555442 3
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..+.|.+ ..+ + ---+..+.++++.|+++|+. +..+.
T Consensus 256 ~~d~v~i--k~~---------~--~GGit~~~~i~~~A~~~g~~-~~~~~ 291 (368)
T 1sjd_A 256 AVQIVNI--KPG---------R--VGGYLEARRVHDVCAAHGIP-VWCGG 291 (368)
T ss_dssp CCSEEEE--CTT---------T--TTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCCEEEe--ccc---------c--cCCHHHHHHHHHHHHHcCCc-EEeCC
Confidence 4566654 111 1 11255677889999999986 44433
No 483
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=55.61 E-value=39 Score=35.76 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeeccc-chhhHHHHHHHHhc
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 171 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 171 (620)
..++.++-+++++.|.++|++.||. |. .+++..+++++... +| |++=.+. ...+++..++ .
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~--P~---~d~~~~~~l~~~~~---------iP-Ia~dE~~~~~~~~~~~i~---~ 283 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI--DS---YSPQGLAYVRNHSP---------HP-ISSCETLFGIREFKPFFD---A 283 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC--CC---SCHHHHHHHHHTCS---------SC-EEECTTCCHHHHHHHHHH---T
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe--Cc---CCHHHHHHHHhhCC---------CC-EEeCCCcCCHHHHHHHHH---h
Confidence 3579999999999999999999995 53 36677777776431 23 3332222 2344544443 2
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEc
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 221 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~ 221 (620)
..++.|.+= .++ --+..+.++++.|+++|+. +..+
T Consensus 284 ~~~d~v~~k-------------~~~-GGit~~~~ia~~A~~~gi~-~~~h 318 (409)
T 3go2_A 284 NAVDVAIVD-------------TIW-NGVWQSMKIAAFADAHDIN-VAPH 318 (409)
T ss_dssp TCCSEEEEC-------------HHH-HCHHHHHHHHHHHHHTTCE-EEEC
T ss_pred CCCCEEEeC-------------CCC-CCHHHHHHHHHHHHHcCCE-Eeec
Confidence 345665541 122 3356677889999999985 5544
No 484
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=55.56 E-value=68 Score=34.25 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=65.6
Q ss_pred HHHHHHhHcCCCEEEEecCCCChh------------H-HHHHHHHHHHhcccccccCCc-cceEEeecccchhhHHHHHH
Q 007056 102 DIARQLAKLGVDIIEAGFPAASKE------------D-FEAVRTIAKEVGNAVDAESGY-VPVICGLSRCNERDIKTAWE 167 (620)
Q Consensus 102 ~Ia~~L~~~Gvd~IEvGfP~~s~~------------d-~e~v~~i~~~~~~~~~~~~~l-~~~i~~~~r~~~~dI~~a~e 167 (620)
+.++.|.++|++.|++|.=+.+++ + .++++.+.+. +-. .. ...|.|+---+.+++...++
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~-G~~-----~v~~dlI~GlPget~e~~~~tl~ 227 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREI-GFT-----STNIDLIYGLPKQTPESFAFTLK 227 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT-TCC-----SCEEEEEESCTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHc-CCC-----cEEEEEEcCCCCCCHHHHHHHHH
Confidence 345667778888888885332322 2 2344444432 111 01 12455665556778888877
Q ss_pred HHhcCCCCEEEEEecC----CHHHHHH--HhC-CCHHHHHHHHHHHHHHHHHcCCCEEE
Q 007056 168 AVKYAKRPRIHTFIAT----SGIHMEH--KLR-KTKQQVVEIARSMVKFARSLGCDDVE 219 (620)
Q Consensus 168 al~~ag~~~v~i~~~~----Sd~h~~~--~l~-~t~ee~l~~~~~~v~~a~~~G~~~V~ 219 (620)
.+...+.+.|.+|.-+ ...+.+. ... -+.++.+++...+.+.+.+.|+..++
T Consensus 228 ~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ye 286 (457)
T 1olt_A 228 RVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIG 286 (457)
T ss_dssp HHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 7777788888887322 2211111 111 25678888888888888888875433
No 485
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=55.47 E-value=43 Score=33.95 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=53.8
Q ss_pred HHHHHHc--CCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCcccc-CHHHHHHHHHHHHHhCCCCCceeEEE
Q 007056 207 VKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVIST 283 (620)
Q Consensus 207 v~~a~~~--G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~-~P~~v~~li~~l~~~~~~~~~v~i~~ 283 (620)
.++++++ |. .+-++|. +..++.+.+.++.+.+.|.|.|-+. |.|+. ..+.+.++++.+++.++ +|+-.
T Consensus 31 ~~~l~~~~~~~-~~liDPd---K~~~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~----lPvil 101 (286)
T 3vk5_A 31 LARLREHQPGP-VHIIDPF---KVPVTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATP----LPVVL 101 (286)
T ss_dssp HHHHHHSCCEE-EEEECTT---TSCHHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCS----SCEEE
T ss_pred HHHHHhccCCc-eEEECCC---CCCcHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCC----CCEEE
Confidence 4455554 22 2445664 6778888889999999999999999 99873 27889999999999773 66777
Q ss_pred ecC
Q 007056 284 HCQ 286 (620)
Q Consensus 284 H~H 286 (620)
|+=
T Consensus 102 ~fP 104 (286)
T 3vk5_A 102 HFP 104 (286)
T ss_dssp ECC
T ss_pred ECC
Confidence 665
No 486
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=55.26 E-value=53 Score=33.96 Aligned_cols=78 Identities=17% Similarity=0.079 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEeec----------CCcccc---CHHHHHHHHHHHHHhCCCCCceeEEE--e-cCCCcc--
Q 007056 229 DRKFLYEILGEVIKVGATTLNIP----------DTVGIT---MPTEFGKLIADIKANTPGIENVVIST--H-CQNDLG-- 290 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~----------DTvG~~---~P~~v~~li~~l~~~~~~~~~v~i~~--H-~HND~G-- 290 (620)
+++.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++++.+++.+. ++|.+ . .-++..
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~----~PV~vKiR~g~~~~~~~ 143 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVR----VPVTVKMRLGLEGKETY 143 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS----SCEEEEEESCBTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC----CceEEEEecCcCccccH
Confidence 56667777777777777765542 444544 58889999999998762 44555 2 222221
Q ss_pred -hHHHHHHHHHHhcCcEEeec
Q 007056 291 -LSTANTIAGACAGARQVEVT 310 (620)
Q Consensus 291 -lAvANslaAv~aGA~~Vd~T 310 (620)
..+.-+..+.++|++.|..+
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 23445567778999999865
No 487
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=55.26 E-value=1e+02 Score=29.82 Aligned_cols=118 Identities=11% Similarity=0.035 Sum_probs=67.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEE-EcCC---CCCCCCH-----
Q 007056 160 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE-FSPE---DAGRSDR----- 230 (620)
Q Consensus 160 ~dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~-f~~e---d~~r~d~----- 230 (620)
.+++..++.++.+|.+.|.+..... ...+. +.+.+..+.+++.|+.... +++. +....++
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~-------~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~ 85 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASPL-------PFYSD----IQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKN 85 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTTG-------GGCCH----HHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCccc-------CCcCH----HHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHH
Confidence 3567777777778999999875421 11222 2345666788889986322 2332 1222233
Q ss_pred --HHHHHHHHHHHHcCCcEEee--cCCcc-----ccC-HHHHHHHHHHHHHhCC--CCCceeEEEecCCC
Q 007056 231 --KFLYEILGEVIKVGATTLNI--PDTVG-----ITM-PTEFGKLIADIKANTP--GIENVVISTHCQND 288 (620)
Q Consensus 231 --e~l~~~~~~~~~aGa~~I~L--~DTvG-----~~~-P~~v~~li~~l~~~~~--~~~~v~i~~H~HND 288 (620)
+++.+.++.+.+.|+..|++ ....| ... +..+..+++.+++-.+ ...++.|.+|.|+.
T Consensus 86 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 155 (294)
T 3vni_A 86 AKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNR 155 (294)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 56778888899999999863 33222 112 2334444443332211 00147899999985
No 488
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=55.22 E-value=2.3e+02 Score=30.64 Aligned_cols=158 Identities=18% Similarity=0.181 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHh-cccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 94 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEV-GNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 94 ~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~-~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
.+|.+++..| +...+.|+|.|=+-|. .+++|...++.+.+.. +.. ..|.+-. -+.+.++..-+-+..
T Consensus 169 ~ltekD~~Di-~~~l~~gvD~I~lsfV-~saeDv~~~~~~l~~~~~~~--------i~IiakI-Et~eav~nldeI~~~- 236 (470)
T 1e0t_A 169 ALAEKDKQDL-IFGCEQGVDFVAASFI-RKRSDVIEIREHLKAHGGEN--------IHIISKI-ENQEGLNNFDEILEA- 236 (470)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEESSC-CSHHHHHHHHHHHHTTTCTT--------CEEEEEE-CSHHHHHTHHHHHHH-
T ss_pred CCCcCCHHHH-HHHHHcCCCEEEECCC-CCHHHHHHHHHHHHHhcCCC--------ceEEEEE-CCHHHHHhHHHHHHH-
Confidence 4777888777 4555679999998775 4788877777766543 211 1222211 123333322121221
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE------cCCCCCCCCHHHHHHHHHHHHHcCCc
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGAT 246 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f------~~ed~~r~d~e~l~~~~~~~~~aGa~ 246 (620)
.+ .++++-.|+=.+ +..+++......+++.|+..|.. |.. |.....+-....+.+++.++.+ |+|
T Consensus 237 -sD--gImVargDLgve----ig~e~v~~~qk~ii~~araaGkp-vI~ATQMLeSMi~~p~PTRAEvsDVanAV~d-G~D 307 (470)
T 1e0t_A 237 -SD--GIMVARGDLGVE----IPVEEVIFAQKMMIEKCIRARKV-VITATMMLDSMIKNPRPTDAEAGDVANAILD-GTD 307 (470)
T ss_dssp -SS--EEEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCE-EEEECC---------CCCHHHHHHHHHHHHH-TCS
T ss_pred -CC--EEEECchHhhhh----cCHHHHHHHHHHHHHHHHHcCCC-EEEechhhHhhccCCCccHHHHhhhhHhhhc-Ccc
Confidence 34 456666665554 34577777778899999999975 443 2223345566788888888765 999
Q ss_pred EEeec-CCccccCHHHHHHHHHHHHHh
Q 007056 247 TLNIP-DTVGITMPTEFGKLIADIKAN 272 (620)
Q Consensus 247 ~I~L~-DTvG~~~P~~v~~li~~l~~~ 272 (620)
.+-|. .|.-.-.|-+.-+.+..+...
T Consensus 308 avMLSgETA~G~yPveaV~~m~~I~~~ 334 (470)
T 1e0t_A 308 AVMLSGESAKGKYPLEAVSIMATICER 334 (470)
T ss_dssp EEEECCC------CHHHHHHHHHHHHH
T ss_pred EEEecccccCCCCHHHHHHHHHHHHHH
Confidence 99995 677777888877776666554
No 489
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=54.91 E-value=30 Score=36.57 Aligned_cols=105 Identities=9% Similarity=0.026 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++ +++++.|.++|+..||=-+| ++|++..+++++...- |...+=.-....+++..++.
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~~~~--- 276 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHEQPLH---YEALLDLKELGERIET---------PICLDESLISSRVAEFVAKL--- 276 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEESCSC---TTCHHHHHHHHHHSSS---------CEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHhc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 226 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~ 226 (620)
..++.|.+ +.++---+..+.++++.|+++|+. +..++...+
T Consensus 277 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es 317 (400)
T 3mwc_A 277 GISNIWNI-------------KIQRVGGLLEAIKIYKIATDNGIK-LWGGTMPES 317 (400)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCSCCC
T ss_pred CCCCEEEE-------------cchhhCCHHHHHHHHHHHHHcCCE-EEecCCCCC
No 490
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=54.84 E-value=91 Score=32.39 Aligned_cols=85 Identities=16% Similarity=0.053 Sum_probs=50.3
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC--------C--CCCCCH
Q 007056 161 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--------D--AGRSDR 230 (620)
Q Consensus 161 dI~~a~eal~~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e--------d--~~r~d~ 230 (620)
+++..++.++..|.+.|.+. +.++ .-...+..+.-+.+.+..+.+++.|+..+.+++. + .+..++
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~----~~~l-~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd~ 108 (393)
T 1xim_A 34 DPVEAVHKLAEIGAYGITFH----DDDL-VPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDR 108 (393)
T ss_dssp CHHHHHHHHHHHTCSEEECB----HHHH-SCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSH
T ss_pred CHHHHHHHHHHhCCCEEEee----cccC-CCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCCH
Confidence 56666666667799988875 1111 0012232222345556677888899863344431 1 112233
Q ss_pred -------HHHHHHHHHHHHcCCcEEee
Q 007056 231 -------KFLYEILGEVIKVGATTLNI 250 (620)
Q Consensus 231 -------e~l~~~~~~~~~aGa~~I~L 250 (620)
+++.+.++.+.+.|+..|++
T Consensus 109 ~~r~~~i~~~~~~i~~A~~LGa~~vv~ 135 (393)
T 1xim_A 109 SVRRYAIRKVLRQMDLGAELGAKTLVL 135 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 57788888888999998877
No 491
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=54.78 E-value=25 Score=36.77 Aligned_cols=103 Identities=10% Similarity=0.114 Sum_probs=0.0
Q ss_pred CCCCC-HHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHh
Q 007056 92 GATLT-SKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 170 (620)
Q Consensus 92 g~~fs-~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 170 (620)
+..++ .++-+++++.|.++|++.||--.| +.|++..+++++...- |.+.+=.-....+++..++.-
T Consensus 201 n~~~~d~~~A~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~l~~~- 267 (374)
T 3sjn_A 201 ASKWHTCGHSAMMAKRLEEFNLNWIEEPVL---ADSLISYEKLSRQVSQ---------KIAGGESLTTRYEFQEFITKS- 267 (374)
T ss_dssp TTTTCSHHHHHHHHHHSGGGCCSEEECSSC---TTCHHHHHHHHHHCSS---------EEEECTTCCHHHHHHHHHHHH-
T ss_pred CCCCCCHHHHHHHHHHhhhcCceEEECCCC---cccHHHHHHHHhhCCC---------CEEeCCCcCCHHHHHHHHHcC-
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
.++.|.+ +.++---+..+.++++.|+++|+. +...+.
T Consensus 268 --~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 304 (374)
T 3sjn_A 268 --NADIVQP-------------DITRCGGITEMKKIYDIAQMNGTQ-LIPHGF 304 (374)
T ss_dssp --CCSEECC-------------BTTTSSHHHHHHHHHHHHHHHTCE-ECCBCC
T ss_pred --CCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCE-EEecCC
No 492
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=54.73 E-value=65 Score=33.74 Aligned_cols=99 Identities=15% Similarity=0.168 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHhHcCC--CEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHh
Q 007056 93 ATLTSKEKLDIARQLAKLGV--DIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 170 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gv--d~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 170 (620)
..++.++-+++++.|.++|+ ..||=-+| +.|++..+++++..+- | | +=.-....+++..++.
T Consensus 196 ~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~---~~d~~~~~~l~~~~~i---------P-I-dE~~~~~~~~~~~~~~-- 259 (391)
T 3gd6_A 196 HLLNWKDAHRAIKRLTKYDLGLEMIESPAP---RNDFDGLYQLRLKTDY---------P-I-SEHVWSFKQQQEMIKK-- 259 (391)
T ss_dssp TCSCHHHHHHHHHHHTTCCSSCCEEECCSC---TTCHHHHHHHHHHCSS---------C-E-EEECCCHHHHHHHHHH--
T ss_pred CCcCHHHHHHHHHHHHhcCCCcceecCCCC---hhhHHHHHHHHHHcCC---------C-c-CCCCCCHHHHHHHHHc--
Confidence 34689999999999999999 99996443 4577888888876421 2 2 3222356666666554
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 171 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 171 ~ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
..++.|.+ .. ++---+..+.++++.|+++|+. +..++
T Consensus 260 -~~~d~v~~--k~-----------~~~GGit~~~~ia~~A~~~gi~-~~~~~ 296 (391)
T 3gd6_A 260 -DAIDIFNI--SP-----------VFIGGLTSAKKAAYAAEVASKD-VVLGT 296 (391)
T ss_dssp -TCCSEEEE--CH-----------HHHTSHHHHHHHHHHHHHTTCE-EEECC
T ss_pred -CCCCEEEE--Cc-----------hhcCCHHHHHHHHHHHHHcCCE-EEecC
Confidence 24566554 11 1111255677889999999985 66544
No 493
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=54.67 E-value=41 Score=40.02 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=57.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEee----cCC-----ccc---cCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHH
Q 007056 228 SDRKFLYEILGEVIKVGATTLNI----PDT-----VGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 295 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L----~DT-----vG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 295 (620)
.+++.+.+.++.+.++|+|.|.| |-+ .|. ..|..+.++++++++.+. +||.+=.--|.--...-
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~----~Pv~vK~~~~~~~~~~~ 720 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ----IPFFAKLTPNVTDIVSI 720 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC----CceEEEeCCChHHHHHH
Confidence 56788889999999999998777 333 222 468899999999999863 45665443344335566
Q ss_pred HHHHHHhcCcEEee
Q 007056 296 TIAGACAGARQVEV 309 (620)
Q Consensus 296 slaAv~aGA~~Vd~ 309 (620)
+.++.++|++.|..
T Consensus 721 a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKEGGADGVTA 734 (1025)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 78889999999988
No 494
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=54.59 E-value=30 Score=33.61 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCCccccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHHHHHHhcCcEE
Q 007056 228 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 307 (620)
Q Consensus 228 ~d~e~l~~~~~~~~~aGa~~I~L~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 307 (620)
.+++.+.++++++.+.|++.|-+.... | ...+.++.+++.+|+ +.++... -+ -.-..-.|+++||+.|
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~----~-~~~~~i~~l~~~~~~---l~vgaGt--vl--~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRS----E-AAADAIRLLRANRPD---FLIAAGT--VL--TAEQVVLAKSSGADFV 93 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS----T-THHHHHHHHHHHCTT---CEEEEES--CC--SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC----c-hHHHHHHHHHHhCcC---cEEeeCc--Ee--eHHHHHHHHHCCCCEE
Confidence 345667899999999999998887653 3 235688888888874 5566543 11 1367789999999999
Q ss_pred e
Q 007056 308 E 308 (620)
Q Consensus 308 d 308 (620)
+
T Consensus 94 ~ 94 (224)
T 1vhc_A 94 V 94 (224)
T ss_dssp E
T ss_pred E
Confidence 5
No 495
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=54.53 E-value=26 Score=37.29 Aligned_cols=101 Identities=16% Similarity=0.116 Sum_probs=63.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcC
Q 007056 93 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 172 (620)
Q Consensus 93 ~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 172 (620)
..++.++-+++++.|.++|+++||--.| +.+++..+++++... +|.+.+=.-....+++..++. .
T Consensus 229 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~l~~---~ 293 (418)
T 3r4e_A 229 HRYTPQEAANLGKMLEPYQLFWLEDCTP---AENQEAFRLVRQHTV---------TPLAVGEIFNTIWDAKDLIQN---Q 293 (418)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEESCSC---CSSGGGGHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEECCCC---ccCHHHHHHHHhcCC---------CCEEEcCCcCCHHHHHHHHHc---C
Confidence 3578999999999999999999997443 345666777776532 133222111245666665543 2
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcC
Q 007056 173 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 222 (620)
Q Consensus 173 g~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ 222 (620)
.++.|.+ +.++---+..+.++++.|+++|+. +...+
T Consensus 294 a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 329 (418)
T 3r4e_A 294 LIDYIRA-------------TVVGAGGLTHLRRIADLASLYQVR-TGCHG 329 (418)
T ss_dssp CCSEECC-------------CTTTTTHHHHHHHHHHHHHHTTCE-EEECC
T ss_pred CCCeEec-------------CccccCCHHHHHHHHHHHHHcCCE-EeecC
Confidence 3555433 112223356677888999999985 65543
No 496
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=54.26 E-value=38 Score=34.69 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCCc-----------cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 229 DRKFLYEILGEVIKVGATTLNIPDTV-----------GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 229 d~e~l~~~~~~~~~aGa~~I~L~DTv-----------G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
+++.+.+.++.+.+.|++.|.+.-+- -...++++.++++..++. ++++.+|++++.+ ..
T Consensus 164 ~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~-----g~~v~~H~~~~~~-----i~ 233 (408)
T 3be7_A 164 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNH-----GMKVAAHAHGLIG-----IK 233 (408)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT-----TCEEEEEECSHHH-----HH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCEEEEEeCCHHH-----HH
Confidence 45556666666666666655443221 135678888888877764 3679999998764 33
Q ss_pred HHHHhcCcEE
Q 007056 298 AGACAGARQV 307 (620)
Q Consensus 298 aAv~aGA~~V 307 (620)
.++++|++.|
T Consensus 234 ~~~~~g~~~i 243 (408)
T 3be7_A 234 AAIKAGVDSV 243 (408)
T ss_dssp HHHHHTCSEE
T ss_pred HHHHcCCCEE
Confidence 4567788765
No 497
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=54.24 E-value=1.1e+02 Score=33.35 Aligned_cols=131 Identities=17% Similarity=0.141 Sum_probs=71.5
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCC-ChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 007056 99 EKLDIARQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 177 (620)
Q Consensus 99 ~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~~~v 177 (620)
+-.+.++.|.+.|+|.|++....- +..-.+.++++.+..++ .+.+.+-. ...++.+.+.+ +|++.|
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~--------~~vi~g~v-~t~e~a~~~~~----aGad~i 322 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPS--------LNIIAGNV-ATAEATKALIE----AGANVV 322 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------SEEEEEEE-CSHHHHHHHHH----HTCSEE
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCC--------ceEEeeee-ccHHHHHHHHH----hCCCEE
Confidence 346678899999999999975432 23335778887775321 13333222 24445554444 488888
Q ss_pred EEEecCCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 007056 178 HTFIATSGIHMEH-KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 251 (620)
Q Consensus 178 ~i~~~~Sd~h~~~-~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~ 251 (620)
.+-...-.++... .-+.... .+..+.++.+.+++.++. |.. +++-.+++.+.+ +..+||+.+.+.
T Consensus 323 ~vg~g~gsi~~~~~~~g~g~p-~~~~l~~v~~~~~~~~iP-VIa---~GGI~~~~di~k----ala~GA~~V~vG 388 (511)
T 3usb_A 323 KVGIGPGSICTTRVVAGVGVP-QLTAVYDCATEARKHGIP-VIA---DGGIKYSGDMVK----ALAAGAHVVMLG 388 (511)
T ss_dssp EECSSCSTTCCHHHHHCCCCC-HHHHHHHHHHHHHTTTCC-EEE---ESCCCSHHHHHH----HHHTTCSEEEES
T ss_pred EECCCCccccccccccCCCCC-cHHHHHHHHHHHHhCCCc-EEE---eCCCCCHHHHHH----HHHhCchhheec
Confidence 7521111111111 1122211 244556666777777765 543 344555555443 345899888765
No 498
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=54.15 E-value=27 Score=35.00 Aligned_cols=74 Identities=14% Similarity=-0.041 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCCCC---------CC---C-------HHHHHHHHHHHHHcCCcEEeecCCc--
Q 007056 196 KQQVVEIARSMVKFARSLGCDDVEFSPEDAG---------RS---D-------RKFLYEILGEVIKVGATTLNIPDTV-- 254 (620)
Q Consensus 196 ~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~---------r~---d-------~e~l~~~~~~~~~aGa~~I~L~DTv-- 254 (620)
+++.++.+.+.++.|+.+|.+.|.+.+-... +. . .+.+.++++.+.+.|+. |.|--..
T Consensus 106 r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~ 184 (340)
T 2zds_A 106 RQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVR-FAHEVHPSE 184 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCE-EEEEcCCCc
Confidence 4567889999999999999987666331110 10 0 12444555566667874 3332222
Q ss_pred cccCHHHHHHHHHHHH
Q 007056 255 GITMPTEFGKLIADIK 270 (620)
Q Consensus 255 G~~~P~~v~~li~~l~ 270 (620)
...+|.++.++++.+.
T Consensus 185 ~~~~~~~~~~ll~~v~ 200 (340)
T 2zds_A 185 IAYDYWTTHRALEAVG 200 (340)
T ss_dssp SCCSHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhcC
Confidence 2457887777766553
No 499
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=54.06 E-value=24 Score=37.23 Aligned_cols=103 Identities=9% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhc
Q 007056 92 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 171 (620)
Q Consensus 92 g~~fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 171 (620)
+..++.++-+++++.|.+.|++.||-.+| +.|++..+++++...- |.+.+=.-.+..+++..++.
T Consensus 226 n~~~~~~~ai~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 290 (410)
T 2gl5_A 226 HSLLGTNSAIQFAKAIEKYRIFLYEEPIH---PLNSDNMQKVSRSTTI---------PIATGERSYTRWGYRELLEK--- 290 (410)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEEEECSSC---SSCHHHHHHHHHHCSS---------CEEECTTCCTTHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEECCCC---hhhHHHHHHHHhhCCC---------CEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Q 007056 172 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 223 (620)
Q Consensus 172 ag~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~e 223 (620)
..++.|.+ +..+---+..+.++++.|+++|+. +..+..
T Consensus 291 ~~~d~v~i-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 328 (410)
T 2gl5_A 291 QSIAVAQP-------------DLCLCGGITEGKKICDYANIYDTT-VQVHVC 328 (410)
T ss_dssp TCCSEECC-------------CTTTTTHHHHHHHHHHHHHTTTCE-ECCCCC
T ss_pred CCCCEEec-------------CccccCCHHHHHHHHHHHHHcCCe-EeecCC
No 500
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=53.97 E-value=2.1e+02 Score=29.74 Aligned_cols=169 Identities=12% Similarity=-0.022 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcccccccCCccceEEeecccchhhHHHHHHHHhcCCC
Q 007056 95 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 174 (620)
Q Consensus 95 fs~~~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ag~ 174 (620)
.++++-.+-++...+.|++.+-+=.......|.+.++.+.+.++..+ ...+=+..+...++..+..+.+...+.
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a~g~~~------~L~vDaN~~w~~~~A~~~~~~l~~~~~ 214 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNEFSKNI------KFRFDANQGWNLAQTKQFIEEINKYSL 214 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHCCTTS------EEEEECTTCCCHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHhcCCCC------eEEEeCCCCcCHHHHHHHHHHHhhcCC
Confidence 36777777788888889998887432223467889999888765321 112223333344554444566665222
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHcCCcEEeecCCc
Q 007056 175 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 254 (620)
Q Consensus 175 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a~~~G~~~V~f~~ed~~r~d~e~l~~~~~~~~~aGa~~I~L~DTv 254 (620)
+...+--|..+ +.++ .+.+..+..++. |.- |.+-+++..+. .+++.|+-.+..+|..
T Consensus 215 ~l~~iEeP~~~------------~d~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~----~~i~~~a~d~v~~k~~ 271 (379)
T 3r0u_A 215 NVEIIEQPVKY------------YDIK---AMAEITKFSNIP-VVA---DESVFDAKDAE----RVIDEQACNMINIKLA 271 (379)
T ss_dssp CEEEEECCSCT------------TCHH---HHHHHHHHCSSC-EEE---STTCSSHHHHH----HHHHTTCCSEEEECHH
T ss_pred CcEEEECCCCc------------ccHH---HHHHHHhcCCCC-EEe---CCccCCHHHHH----HHHHcCCCCEEEECcc
Confidence 22223334332 0111 222333445554 433 34445555443 3445665444445554
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCceeEEEecCCCcchHHHHHH
Q 007056 255 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 297 (620)
Q Consensus 255 G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 297 (620)
-+.-..+..++.....+. ++++.+||-...++++|-++
T Consensus 272 ~~GGi~~~~~ia~~A~~~-----gi~~~~~~~~es~i~~aa~~ 309 (379)
T 3r0u_A 272 KTGGILEAQKIKKLADSA-----GISCMVGCMMESPAGILATA 309 (379)
T ss_dssp HHTSHHHHHHHHHHHHHT-----TCEEEECCCSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHc-----CCEEEEeCCCccHHHHHHHH
Confidence 333444556666655553 36788888777777766544
Done!