BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007064
(619 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 215/338 (63%), Gaps = 5/338 (1%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+I E IG G+YGVV SA TG++VAIKKI + F+ +++A H +I
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115
Query: 85 VEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ IK I+ P +FK +YVV +LMESDLHQ+I ++ LT EH ++FLYQLLR LKY+H
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRWYRAPELCG 202
+A V HRDLKP N+L N NC+LKI DFG+AR + + F T+YVATRWYRAPEL
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
S +YT AID+WS+GCIF E+L + LFPGKN VHQL L+ +LGTPS I V ++
Sbjct: 236 SL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 294
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
R Y+ S+ +QPV + +P AD AL LL R+L F+P R +A AL P+
Sbjct: 295 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYH 360
+ EP C P +F F+R +T+E I+E I EI ++H
Sbjct: 355 DDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 215/338 (63%), Gaps = 5/338 (1%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+I E IG G+YGVV SA TG++VAIKKI + F+ +++A H +I
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116
Query: 85 VEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ IK I+ P +FK +YVV +LMESDLHQ+I ++ LT EH ++FLYQLLR LKY+H
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRWYRAPELCG 202
+A V HRDLKP N+L N NC+LKI DFG+AR + + F T+YVATRWYRAPEL
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
S +YT AID+WS+GCIF E+L + LFPGKN VHQL L+ +LGTPS I V ++
Sbjct: 237 SL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
R Y+ S+ +QPV + +P AD AL LL R+L F+P R +A AL P+
Sbjct: 296 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 355
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYH 360
+ EP C P +F F+R +T+E I+E I EI ++H
Sbjct: 356 DDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 8 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 66
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 125
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 186 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 245 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 304
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 305 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 15 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 73
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 132
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 193 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 312 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 16 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 74
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 133
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 194 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 252
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 253 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 312
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 313 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 7 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 65
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 124
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 185 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 243
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 244 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 303
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 304 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 221/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 71
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 72 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 130
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 191 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 310 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 221/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 69
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 128
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 189 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 308 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 220/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 71
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 130
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 191 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 310 LAHPYLAQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 221/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 89
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 148
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 209 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 328 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 221/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 77
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 136
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 197 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 256 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 316 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 221/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 69
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 128
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+YV
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 189 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 308 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAI+KI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP-FEHQTYCQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 8 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 66
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 125
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F T+Y
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 186 VATRWYRAPEIMLN-SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
P + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 245 PEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 304
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 305 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 220/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 69
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 128
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+YV
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 189 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 308 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+Y
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 220/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 69
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 128
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+YV
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 189 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 308 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYXQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+Y
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 219/354 (61%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 72
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 131
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F +
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 192 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 311 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 219/354 (61%), Gaps = 9/354 (2%)
Query: 10 SPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX 69
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 15 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRT 73
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ 129
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHIC 132
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+FLYQ+LR LKYIH+ANV HRDLKP N+L N C LKICDFGLARVA D T F +
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
VATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+
Sbjct: 193 VATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
PS + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
ALA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 312 ALAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 218/353 (61%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 71
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 130
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+YV
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 191 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 249
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 250 SQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 310 LAHPYLAQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 69
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V +LME+DL++++K L+ +H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICY 128
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N LKI DFGLARVA D T F T+YV
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 189 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 308 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 9/353 (2%)
Query: 11 PEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXX 70
PEM + RY IG+G+YG+VCSA D +VAIKKI FEH +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL 89
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQF 130
H +I+ I I+ P+ KD+Y+V LM +DL++++K L+ +H +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICY 148
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
FLYQ+LR LKYIH+ANV HRDLKP N+L N LKICDFGLARVA D T F T+YV
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
ATRWYRAPE+ + YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P
Sbjct: 209 ATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
S + ++ + N KAR YL S+ K V +++ FPNAD AL LL+++L F+P R E+A
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHP 361
LA PY + +PS +PI++ F+F E + KE ++ELIF E + P
Sbjct: 328 LAHPYLEQYY----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 220/344 (63%), Gaps = 9/344 (2%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY + IG+G+YG+V SA D +VAIKKI FEH + H +
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRTLREIQILLRFRHEN 102
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
++ I+ I+ + +D+Y+V +LME+DL++++K+ L+ +H +FLYQ+LR LKYIH
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIH 161
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LKICDFGLAR+A + T F T+ VATRWYRAPE+ +
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS + ++ + N KA
Sbjct: 222 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKA 280
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE 323
R YL S+ K V +++ FP +D AL LL+R+L F+P R T EEALA PY +
Sbjct: 281 RNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY--- 337
Query: 324 REPSCQPISKMEFEF--ERRRVTKEDIRELIFREILEYHPQLLK 365
+P+ +P+++ F F E + KE ++ELIF+E + P +L+
Sbjct: 338 -DPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLE 380
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 216/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
Y +S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +I+ I +I P S +F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-----AFNDTPT--TIFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LK+CDFGLAR+ A N PT T+YVA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG++ HQL L+ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 LDTISR-VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
D R + + +AR Y+ S+ + FP +P + LL+R+L FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEFE--RRRVTKEDIRELIFREIL 357
L PY + EP +PI FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 215/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
Y +S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +I+ I +I P S +F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-----AFNDTPT--TIFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LK+CDFGLAR+ A N PT T+ VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG++ HQL L+ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 LDTISR-VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
D R + + +AR Y+ S+ + FP +P + LL+R+L FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEFE--RRRVTKEDIRELIFREIL 357
L PY + EP +PI FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 215/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
Y +S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +I+ I +I P S +F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-----AFNDTPT--TIFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LK+CDFGLAR+ A N PT ++VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG++ HQL L+ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 LDTISR-VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEA 310
D R + + +AR Y+ S+ + FP +P + LL+R+L FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEFE--RRRVTKEDIRELIFREIL 357
L PY + EP +PI FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 274 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 151
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 205
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 206 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 265 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 324
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 325 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 360
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPFDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 261 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPTDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 275 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 274 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 140
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 194
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 195 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 254 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 313
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 314 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 349
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 198/337 (58%), Gaps = 12/337 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VCS+ D +G K+A+KK+ F+ I A H +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 170
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 224
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + ++QL + L GTP ISR+ + +
Sbjct: 225 NWM-HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + F+ F A+P A+ LLE++L D R TA EALA PYF
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDP 343
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEY 359
+ EP +P + FE R++ E+ + L + E+ +
Sbjct: 344 DDEPESEPYDQ---SFESRQLEIEEWKRLTYEEVCSF 377
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 139
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 193
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 194 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 253 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 312
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 313 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 348
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPQDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPRDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI D+GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + E R + ++ + L + E++ + P
Sbjct: 322 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 357
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------XGYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NAM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ +VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------AGFVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ +VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------AGFVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI FGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + E R + ++ + L + E++ + P
Sbjct: 322 DDEPVADPYDQSS---ESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DF LAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ +VATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------AGFVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ T VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGXVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ IG G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 198/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LKI DFGLAR ++ VATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------XGXVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKYI
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + FE R + ++ + L + E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 198/339 (58%), Gaps = 12/339 (3%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A DT TG +VA+KK+ F+ I A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHIMLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
++ + + P S +F D+Y+V LM +DL+ ++K+ LT +H QF +YQ+LR LKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LKI DFGL R ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + + QL L+ L+GTP + + ++ ++
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
AR Y+ S+ + + F+ F A+P A+ LLE++L D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ EP P + E R + ++ + L + E++ + P
Sbjct: 315 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 193/332 (58%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSA D +KVA+KK+ F+ + A H +++ + +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 91 MLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
P S DF ++Y+V LM +DL+ ++K L+ EH QF +YQLLR LKYIH+A + H
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 146
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N +C+L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 147 RDLKPSNVAVNEDCELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 199
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTS 269
+DIWS+GCI AE+L GK LFPG + + QL + +++GTPS + ++++ ++ AR Y+ S
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 259
Query: 270 MRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
+ S F A+P A+ LL R+L D R +A EALA YF E EP +
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 319
Query: 330 PISKMEFEFERRRVTKEDIRELIFREILEYHP 361
P + E + T E+ +EL ++E+L + P
Sbjct: 320 PYDE---SVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 192/330 (58%), Gaps = 12/330 (3%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSA D +KVA+KK+ F+ + A H +++ + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 91 MLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
P S DF ++Y+V LM +DL+ ++K+ L+ EH QF +YQLLR LKYIH+A + H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N + +L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 207
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTS 269
+DIWS+GCI AE+L GK LFPG + + QL + +++GTPS + ++++ ++ AR Y+ S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 270 MRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
+ S F A+P A+ LL R+L D R +A EALA YF E EP +
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 330 PISKMEFEFERRRVTKEDIRELIFREILEY 359
P + E + T E+ +EL ++E+L +
Sbjct: 328 PYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 191/330 (57%), Gaps = 12/330 (3%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSA D +KVA+KK+ F+ + A H +++ + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 91 MLPP-SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
P S DF ++Y+V LM +DL+ ++K L+ EH QF +YQLLR LKYIH+A + H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N + +L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 207
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTS 269
+DIWS+GCI AE+L GK LFPG + + QL + +++GTPS + ++++ ++ AR Y+ S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 270 MRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
+ S F A+P A+ LL R+L D R +A EALA YF E EP +
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 330 PISKMEFEFERRRVTKEDIRELIFREILEY 359
P + E + T E+ +EL ++E+L +
Sbjct: 328 PYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 198/338 (58%), Gaps = 12/338 (3%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+ + +G G+YG VCSA+D TG KVAIKK++ F+ A H ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 85 VEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + + P + DF D Y+V M +DL +++K ++ L + QF +YQ+L+ L+YIH
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
A + HRDLKP N+ N +C+LKI DFGLAR A ++ V TRWYRAPE+ +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM------XGXVVTRWYRAPEVILN 199
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +YT +DIWS+GCI AE++TGK LF G + + QL + + GTP + + R+++D+A
Sbjct: 200 WM-RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE 323
+ Y+ + + + F+ NA P A+ LLE++L D + R TA EALA PYF+ L E
Sbjct: 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE 318
Query: 324 REPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHP 361
EP Q K + F+ T ++ + + ++E+L + P
Sbjct: 319 DEPQVQ---KYDDSFDDVDRTLDEWKRVTYKEVLSFKP 353
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 190/332 (57%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSAID +GEKVAIKK+ F+ A H +++ + +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 91 MLPPSR-RDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
P S R+F D Y+V M++DL +++ + + E Q+ +YQ+L+ LKYIH+A V H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N +C+LKI DFGLAR A + T YV TRWYRAPE+ S+ Y
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHADAEM------TGYVVTRWYRAPEVILSWMH-YN 220
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTS 269
+DIWS+GCI AE+LTGK LF GK+ + QL + + G P + + ++ + A+ Y+ S
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 270 MRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
+ + F+Q FP A P A LLE++L D R TA +AL P+F+ E E Q
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340
Query: 330 PISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ E ++T ++ ++ I++EI+ + P
Sbjct: 341 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 189/332 (56%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSAID +GEKVAIKK+ F+ A H +++ + +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 91 MLPPSR-RDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
P S R+F D Y+V M++DL +++ + E Q+ +YQ+L+ LKYIH+A V H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N +C+LKI DFGLAR A + T YV TRWYRAPE+ S+ Y
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHADAEM------TGYVVTRWYRAPEVILSWMH-YN 202
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTS 269
+DIWS+GCI AE+LTGK LF GK+ + QL + + G P + + ++ + A+ Y+ S
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 270 MRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
+ + F+Q FP A P A LLE++L D R TA +AL P+F+ E E Q
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322
Query: 330 PISKMEFEFERRRVTKEDIRELIFREILEYHP 361
+ E ++T ++ ++ I++EI+ + P
Sbjct: 323 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 211/369 (57%), Gaps = 43/369 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXX-XXXXXXXXXXXHP 82
+Y++ + +GKG+YG+V +ID TGE VA+KKI D F++ +DA H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
+IV + +++ + RD +Y+VF+ ME+DLH VI+AN L H Q+ +YQL++ +KY+
Sbjct: 70 NIVNLLNVLRADNDRD---VYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYL 125
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARV------AFNDTPTTI------------ 184
H+ + HRD+KP NIL NA C +K+ DFGL+R N+ P +I
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLM 243
TDYVATRWYRAPE L GS +KYT ID+WS+GCI E+L GKP+FPG + ++QL+ +
Sbjct: 186 ILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 244 TDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK--------------FPNADPS- 288
++ PS + + +++ A+ + S+++K ++ S K P AD +
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 289 -ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
AL LL++LL F+P R +A +AL P+ EP+C I + + + + +D
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPIN-DNVKHSIDD 362
Query: 348 IRELIFREI 356
R L++ EI
Sbjct: 363 YRNLVYSEI 371
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 204/418 (48%), Gaps = 58/418 (13%)
Query: 2 QQDHRKKNSPEM-EFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF 60
+Q H K + M S++ RY+I+ +IG GSYG VC A D VAIKKI +F
Sbjct: 31 KQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF 90
Query: 61 EHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN 120
E + D H +V++ I++P F ++YVV E+ +SD ++ +
Sbjct: 91 EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP 150
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA---- 176
LT H + LY LL +KY+H+A + HRDLKP N L N +C +K+CDFGLAR
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210
Query: 177 -----------FNDTPTTIF---------WTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216
+D F T +V TRWYRAPEL YT AID+WS
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI-LLQENYTEAIDVWS 269
Query: 217 IGCIFAEVLTG-----------KPLFPGKNVV--------------------HQLDLMTD 245
IGCIFAE+L PLFPG + QL+++ +
Sbjct: 270 IGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN 329
Query: 246 LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP 305
+LGTPS + I + + A+RY+ K++ +++FP + A+ LL+R+L F+P R
Sbjct: 330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRI 389
Query: 306 TAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIFREILEYHPQL 363
T E LA P+FK + E E + ++ F + + + +R +EI YHP++
Sbjct: 390 TINECLAHPFFKEVRIAEVETNATEKVRLPFN-DWMNMDEPQLRYAFVKEIQRYHPEI 446
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 197/400 (49%), Gaps = 51/400 (12%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y I+ +IG+GSYG V A D +T + VAIKK++ +FE + D I
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHT 144
+ + +++P F ++Y+V E+ +SDL ++ K LT EH + LY LL +IH
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 145 ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF------------------- 185
+ + HRDLKP N L N +C +K+CDFGLAR ++ T I
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-----------PLFPGK 234
T +V TRWYRAPEL YT +IDIWS GCIFAE+L PLFPG
Sbjct: 208 LTSHVVTRWYRAPELI-LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS 266
Query: 235 NV-----------VH------QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQ 277
+ VH QL+++ +++GTP+ D + + + +Y+ ++P+
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326
Query: 278 FSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFE 337
QK+P+ + LLE +L F+P R T ++AL PY K + K + E K+
Sbjct: 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFST--KKIILP 384
Query: 338 FERRRVTKE-DIRELIFREILEYHPQLLKDYMNGTERTNF 376
F+ V E +R + +E+ +HP+L+ + NF
Sbjct: 385 FDDWMVLSETQLRYIFLKEVQSFHPELVIPSVFTIHENNF 424
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 198/366 (54%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 198/371 (53%), Gaps = 29/371 (7%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E D++ RY+ + IG G+ G+VC+A DT G VA+KK+ F+
Sbjct: 3 KSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC--- 177
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T T YV TR+YRAPE+ Y +DIWS+GCI E++ G +F G + + Q
Sbjct: 178 -TNFMMTPYVVTRYYRAPEVILGM--GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN------------ADPS 288
+ + + LGTPS + ++ ++ R Y+ + K ++F + FP+
Sbjct: 235 NKVIEQLGTPSAEFMAALQ-PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
A LL ++L DP R + +EAL PY E P + + E R E+
Sbjct: 294 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD-PAEAEAPPPQIYDAQLEEREHAIEEW 352
Query: 349 RELIFREILEY 359
+ELI++E++++
Sbjct: 353 KELIYKEVMDW 363
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 198/366 (54%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 159
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 160 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 214
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 272
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 273 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 387
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 388 EEWKELIYKEVM 399
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 159
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 160 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 214
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 272
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 273 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 387
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 388 EEWKELIYKEVM 399
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 122
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 123 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 177
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 236 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 294
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 350
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 351 EEWKELIYKEVM 362
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 349
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 122
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 123 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 177
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 236 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 294
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 350
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 351 EEWKELIYKEVM 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 120
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 121 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 175
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 233
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 234 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 292
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 293 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 348
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 349 EEWKELIYKEVM 360
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPS 288
+ + + LGTP + + +++ R Y+ + K + F + FP++
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 349
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 199/366 (54%), Gaps = 35/366 (9%)
Query: 14 EFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAA 67
+F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHE 119
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFW 186
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 120 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 175
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q + + +
Sbjct: 176 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPSALRLLE 294
LGTP + + +++ R Y+ + K + F + FP++ A LL
Sbjct: 234 LGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292
Query: 295 RLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTKEDIREL 351
++L DP R + ++AL PY V +P+ P + + + R T E+ +EL
Sbjct: 293 KMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKEL 348
Query: 352 IFREIL 357
I++E++
Sbjct: 349 IYKEVM 354
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 199/366 (54%), Gaps = 35/366 (9%)
Query: 14 EFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAA 67
+F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 62
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHE 120
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFW 186
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 176
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q + + +
Sbjct: 177 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPSALRLLE 294
LGTP + + +++ R Y+ + K + F + FP++ A LL
Sbjct: 235 LGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 293
Query: 295 RLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTKEDIREL 351
++L DP R + ++AL PY V +P+ P + + + R T E+ +EL
Sbjct: 294 KMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKEL 349
Query: 352 IFREIL 357
I++E++
Sbjct: 350 IYKEVM 355
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 199/366 (54%), Gaps = 35/366 (9%)
Query: 14 EFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAA 67
+F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 62
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHE 120
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFW 186
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 176
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q + + +
Sbjct: 177 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPSALRLLE 294
LGTP + + +++ R Y+ + K + F + FP++ A LL
Sbjct: 235 LGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 293
Query: 295 RLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTKEDIREL 351
++L DP R + ++AL PY V +P+ P + + + R T E+ +EL
Sbjct: 294 KMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKEL 349
Query: 352 IFREIL 357
I++E++
Sbjct: 350 IYKEVM 355
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 70
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 128
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 184
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 185 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 243 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 301
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 302 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 357
Query: 353 FREILE 358
++E+++
Sbjct: 358 YKEVMD 363
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 198/366 (54%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 15 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 74
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 132
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 188
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q + + + L
Sbjct: 189 PYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 246
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 247 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 305
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 306 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 361
Query: 353 FREILE 358
++E+++
Sbjct: 362 YKEVMD 367
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 198/366 (54%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 4 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 63
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 121
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 177
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q + + + L
Sbjct: 178 PYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 235
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 236 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 294
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 295 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 350
Query: 353 FREILE 358
++E+++
Sbjct: 351 YKEVMD 356
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 203/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PS 288
+ + + LGTP + + +++ R Y+ + K + F + FP+ AD
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 349
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 186/355 (52%), Gaps = 23/355 (6%)
Query: 17 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXX 76
S + RY+ + IG G+ G+VC+A DT G VA+KK+ F++ + A
Sbjct: 16 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 75
Query: 77 XXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQL 135
H +I+ + ++ P + +F+D+Y+V ELM+++L QVI +L E + LYQ+
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQM 133
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T T YV TR+Y
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----STNFMMTPYVVTRYY 189
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI 255
RAPE+ Y +DIWS+GCI E++ G +F G + + Q + + + LGTPS + +
Sbjct: 190 RAPEVILGM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 247
Query: 256 SRVRNDKARRYLTSMRKKQPVQFSQKFPN------------ADPSALRLLERLLAFDPKD 303
+ ++ R Y+ + + F + FP+ A LL ++L DP
Sbjct: 248 AALQ-PTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDK 306
Query: 304 RPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIFREILE 358
R + +EAL PY E P + + E R E+ +ELI++E+++
Sbjct: 307 RISVDEALRHPYITVWYD-PAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMD 360
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PS 288
+ + + LGTP + + +++ R Y+ + K + F + FP+ AD
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTK 345
A LL ++L DP R + ++AL PY V +P+ P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTI 349
Query: 346 EDIRELIFREIL 357
E+ +ELI++E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 189/391 (48%), Gaps = 54/391 (13%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+I+ +IG+GSYG V A D + + VAIKK++ +FE + D I
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHT 144
+ + +++P F ++Y+V E+ +SDL ++ K LT +H + LY LL K+IH
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 145 ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF------------------- 185
+ + HRDLKP N L N +C +KICDFGLAR +D I
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 186 ---WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-----------PLF 231
T +V TRWYRAPEL YT +IDIWS GCIFAE+L PLF
Sbjct: 210 KKQLTSHVVTRWYRAPELI-LLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLF 268
Query: 232 PGKNV-----------VH------QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQ 274
PG + VH QL+++ +++GTP + + + + +Y+ +
Sbjct: 269 PGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRD 328
Query: 275 PVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKM 334
+ S+K+ + + LLE +L F+ + R T ++AL+ PY K + K E K+
Sbjct: 329 GIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFST--EKI 386
Query: 335 EFEFERRRVTKE-DIRELIFREILEYHPQLL 364
F+ V E +R + +EI +H L+
Sbjct: 387 ILPFDDWMVLSETQLRYIFLKEIQSFHADLI 417
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 199/366 (54%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 184 PEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFP------NADPSALR------LLER 295
GTP + + +++ R Y+ + K F + FP +++ +AL+ LL +
Sbjct: 242 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 196/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 12 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 71
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 129
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMV 185
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
+V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q + + + L
Sbjct: 186 PFVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 244 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 302
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 303 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 358
Query: 353 FREILE 358
++E+++
Sbjct: 359 YKEVMD 364
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 198/366 (54%), Gaps = 35/366 (9%)
Query: 14 EFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAA 67
+F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK 61
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHE 119
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFW 186
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMM 175
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q + + +
Sbjct: 176 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNA------------DPSALRLLE 294
LGTP + + +++ R Y+ + K + F + FP++ A LL
Sbjct: 234 LGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292
Query: 295 RLLAFDPKDRPTAEEALADPYFKGLSKVEREPS---CQPISKMEFEFERRRVTKEDIREL 351
++L DP R + ++AL PY V +P+ P + + + R T E+ +EL
Sbjct: 293 KMLVIDPAKRISVDDALQHPYI----NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKEL 348
Query: 352 IFREIL 357
I++E++
Sbjct: 349 IYKEVM 354
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 196/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 200/369 (54%), Gaps = 38/369 (10%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PS 288
+ + + LGTP + + +++ R Y+ + K + F + FP+ AD
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
A LL ++L DP R + ++AL PY V +P+ + R T E+
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAXXXXX------DEREHTIEEW 343
Query: 349 RELIFREIL 357
+ELI++E++
Sbjct: 344 KELIYKEVM 352
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 195/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMME 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
V TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q + + + L
Sbjct: 184 PEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPCPAFMKKLQ-PTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 195/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+V +A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A T+ T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + + Q + + + L
Sbjct: 184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTPS + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 196/366 (53%), Gaps = 35/366 (9%)
Query: 15 FFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F++ + A
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
H +I+ + ++ P S +F+D+Y+V ELM+++L QVI+ +L E
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHER 127
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT 187
+ LYQ+L +K++H+A + HRDLKP NI+ ++C LKI DFGLAR A T+
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMME 183
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
V TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q + + + L
Sbjct: 184 PEVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 248 GTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PSALRLLER 295
GTP + + +++ R Y+ + K F + FP+ AD A LL +
Sbjct: 242 GTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 296 LLAFDPKDRPTAEEALADPYFKGL---SKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
+L D R + +EAL PY S+ E P P + + + R T E+ +ELI
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP----DKQLDEREHTIEEWKELI 356
Query: 353 FREILE 358
++E+++
Sbjct: 357 YKEVMD 362
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 196/369 (53%), Gaps = 40/369 (10%)
Query: 8 KNSPEMEFFS-EYGDAS-----RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFE 61
K+ + +F+S E GD++ RY+ + IG G+ G+VC+A D VAIKK+ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLP-PSRRDFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + +F+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
+L E + LYQ+L +K++H+A + HRDLKP NI+ ++ LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPN----AD--------PS 288
+ + + LGTP + + +++ R Y+ + K + F + FP+ AD
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
A LL ++L DP R + ++AL PY + R T E+
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYXXXXXX------------DEREHTIEEW 341
Query: 349 RELIFREIL 357
+ELI++E++
Sbjct: 342 KELIYKEVM 350
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 161/311 (51%), Gaps = 23/311 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXX------- 75
S Y +Q I GSYG VC+ +D+ G VAIK++ F +SD
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV---FNTVSDGRTVNILSDSFLCKRVL 77
Query: 76 -----XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQ 129
HP+I+ ++ I + +Y+V ELM +DL QVI ++ +H Q
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+F+Y +L L +H A V HRDL P NIL N + ICDF LAR D T Y
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK----THY 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V RWYRAPEL F +T +D+WS GC+ AE+ K LF G +QL+ + +++GT
Sbjct: 194 VTHRWYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQ-FSQKFPNADPSALRLLERLLAFDPKDRPTAE 308
P ++ + + AR YL + P + ++ P ADP AL L+ ++L F+P+ R + E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 309 EALADPYFKGL 319
+AL PYF+ L
Sbjct: 313 QALRHPYFESL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 161/311 (51%), Gaps = 23/311 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXX------- 75
S Y +Q I GSYG VC+ +D+ G VAIK++ F +SD
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV---FNTVSDGRTVNILSDSFLCKRVL 77
Query: 76 -----XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQ 129
HP+I+ ++ I + +Y+V ELM +DL QVI ++ +H Q
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+F+Y +L L +H A V HRDL P NIL N + ICDF LAR D T Y
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK----THY 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V RWYRAPEL F +T +D+WS GC+ AE+ K LF G +QL+ + +++GT
Sbjct: 194 VTHRWYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQ-FSQKFPNADPSALRLLERLLAFDPKDRPTAE 308
P ++ + + AR YL + P + ++ P ADP AL L+ ++L F+P+ R + E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 309 EALADPYFKGL 319
+AL PYF+ L
Sbjct: 313 QALRHPYFESL 323
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 167/322 (51%), Gaps = 29/322 (9%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
SRY + +G G G+V SA+D ++VAIKKI + H
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDH 67
Query: 82 PDIVEIKHIMLPP---------SRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFL 132
+IV++ I+ P S + +Y+V E ME+DL V++ L EH + F+
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-LLEEHARLFM 126
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANA-NCKLKICDFGLARVAFNDTPTTIFWTDYVA 191
YQLLR LKYIH+ANV HRDLKP N+ N + LKI DFGLAR+ ++ +
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
T+WYR+P L S + YT AID+W+ GCIFAE+LTGK LF G + + Q+ L+
Sbjct: 187 TKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI-------- 237
Query: 252 LDTISRVRNDKARRYLTSM------RKKQPVQ-FSQKFPNADPSALRLLERLLAFDPKDR 304
L++I V + + L+ + +P + +Q P A+ LE++L F P DR
Sbjct: 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 305 PTAEEALADPYFKGLSKVEREP 326
TAEEAL+ PY S EP
Sbjct: 298 LTAEEALSHPYMSIYSFPMDEP 319
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 166/303 (54%), Gaps = 16/303 (5%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G +Y+ E +G+G+YGVV A D+ G VA+K+I E +
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRA 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQLLR
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N++ LK+ DFGLAR AF P + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG QL + +LGTP+ +
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRNDKARRYLT-SMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
V+ + T + +K+P +S P + LL +L FDP R +A +A+ PYF
Sbjct: 247 VQELPLWKQRTFQVFEKKP--WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
Query: 317 KGL 319
K L
Sbjct: 305 KDL 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 166/303 (54%), Gaps = 16/303 (5%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G +Y+ E +G+G+YGVV A D+ G VA+K+I E +
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQLLRA 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQLLR
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N++ LK+ DFGLAR AF P + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG QL + +LGTP+ +
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRNDKARRYLT-SMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
V+ + T + +K+P +S P + LL +L FDP R +A +A+ PYF
Sbjct: 247 VQELPLWKQRTFQVFEKKP--WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
Query: 317 KGL 319
K L
Sbjct: 305 KDL 307
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 228
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLSK 321
+ ++K
Sbjct: 289 QDVTK 293
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 164/304 (53%), Gaps = 15/304 (4%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRA 138
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 65 HPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAP 176
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
E L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 177 EILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVW 232
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
Query: 318 GLSK 321
++K
Sbjct: 293 DVTK 296
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 76 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGXKY 187
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 188 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 243
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 76 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 187
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 188 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 243
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGXKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 228
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLSK 321
+ ++K
Sbjct: 289 QDVTK 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 228
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLSK 321
+ ++K
Sbjct: 289 QDVTK 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 229
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLSK 321
+ ++K
Sbjct: 290 QDVTK 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 229
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLSK 321
+ ++K
Sbjct: 290 QDVTK 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 229
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLSK 321
+ ++K
Sbjct: 290 QDVTK 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 64 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 175
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 176 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 231
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 317 KGLSK 321
+ ++K
Sbjct: 292 QDVTK 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 228
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLSK 321
+ ++K
Sbjct: 289 QDVTK 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 228
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLSK 321
+ ++K
Sbjct: 289 QDVTK 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 229
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLSK 321
+ ++K
Sbjct: 290 QDVTK 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 160/298 (53%), Gaps = 18/298 (6%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GSYGVV + TG+ VAIKK + + HP++V + +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 91 MLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
R + +++VFE + + LH++ + + + +Q L+A+ + H N H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 150 RDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT 209
RD+KP+NIL + +K+CDFG AR+ T + ++ D VATRWYR+PEL ++Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLL---TGPSDYYDDEVATRWYRSPELLVGD-TQYG 181
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND-KARRYLT 268
P +D+W+IGC+FAE+L+G PL+PGK+ V QL L+ LG D I R + +Y +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG----DLIPRHQQVFSTNQYFS 237
Query: 269 SMRKKQPVQ---FSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVE 323
++ P KFPN AL LL+ L DP +R T E+ L PYF+ + ++E
Sbjct: 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 15/305 (4%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE ++ DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVV 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLSK 321
+ ++K
Sbjct: 291 QDVTK 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+ KI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+ KI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 160/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + A+ + + +L+QLL+ L + H+
Sbjct: 68 DVIHTENK-----LYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T +T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YTHEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 235
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 159/296 (53%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+ ++K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 157/292 (53%), Gaps = 15/292 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+ L + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N +K+ DFGLAR AF T + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRT--YXHEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP D +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTSMPD 236
Query: 266 YLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
Y S K FS+ P D LL ++L +DP R +A+ ALA P+F+
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 156/296 (52%), Gaps = 15/296 (5%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQFFLYQLLRALKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL + Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LKI DFGLAR AF P + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV--T 229
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ +Y + +P+ + D S + LL ++L DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 156/296 (52%), Gaps = 15/296 (5%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQFFLYQLLRALKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL + Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LKI DFGLAR AF P + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNV--T 229
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ +Y + +P+ + D S + LL ++L DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 156/296 (52%), Gaps = 15/296 (5%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQFFLYQLLRALKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL + Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LKI DFGLAR AF P + T + T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEIVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV--T 229
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ +Y + +P+ + D S + LL ++L DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 17/305 (5%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXHPDIVEIKH 89
+G+G+Y V T VA+K+I EH A H +IV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 90 IMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFFLYQLLRALKYIHTANVY 148
I+ K + +VFE ++ DL Q + ++ H + FL+QLLR L Y H V
Sbjct: 68 II-----HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSK 207
HRDLKP+N+L N +LK+ DFGLAR T T + + V T WYR P+ L GS +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKT---YDNEVVTLWYRPPDILLGS--TD 177
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYL 267
Y+ ID+W +GCIF E+ TG+PLFPG V QL + +LGTP+ +T + +++ +
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
Query: 268 TSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS-KVEREP 326
+ + S P D LL +LL F+ ++R +AE+A+ P+F L ++ + P
Sbjct: 238 NYPKYRAEALLSHA-PRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296
Query: 327 SCQPI 331
I
Sbjct: 297 DTTSI 301
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 171/340 (50%), Gaps = 59/340 (17%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+ +Y + + +G GS+G+VC D +G++ A+KK+ + D H
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDH 59
Query: 82 PDIVEI-----------------------------------KHIMLPPSRRDFKDIYVVF 106
+I+++ K +++ PS+ + + V+
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY--LNVIM 117
Query: 107 ELMESDLHQVIKA----NDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA- 161
E + LH+V+K+ + ++YQL RA+ +IH+ + HRD+KP+N+L N+
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK 177
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL-CGSFFSKYTPAIDIWSIGCI 220
+ LK+CDFG A+ P+ + +R+YRAPEL G+ ++YTP+ID+WSIGC+
Sbjct: 178 DNTLKLCDFGSAKKLIPSEPSVA----XICSRFYRAPELMLGA--TEYTPSIDLWSIGCV 231
Query: 221 FAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQ 280
F E++ GKPLF G+ + QL + ++GTP+ + + R+ +++ K + +
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAK---DWRK 288
Query: 281 KFPNADPS-ALRLLERLLAFDPKDRPTAEEALADPYFKGL 319
P PS A+ LLE++L ++P R EA+A P+F L
Sbjct: 289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 158/308 (51%), Gaps = 26/308 (8%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A + E VAIKK+ + D HP++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKV------LQDKRFKNRELQIMRIVKHPNV 94
Query: 85 VEIKHIMLPPSRRDFKD---IYVVFELMESDLHQV----IKANDDLTREHYQFFLYQLLR 137
V++K S D KD + +V E + +++ K + + ++YQLLR
Sbjct: 95 VDLKAFFY--SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 138 ALKYIHTANVYHRDLKPKNILANA-NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+L YIH+ + HRD+KP+N+L + + LK+ DFG A++ P + +R+YR
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV----SXICSRYYR 208
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APEL + YT IDIWS GC+ AE++ G+PLFPG++ + QL + +LGTPS + I
Sbjct: 209 APELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPY 315
+ + +R P FS+ F P P A+ L+ RLL + P R TA EAL P+
Sbjct: 268 TMNPNYMEHKFPQIR---PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
Query: 316 FKGLSKVE 323
F L E
Sbjct: 325 FDELRTGE 332
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+S++K E +G G+Y V ++ TG VA+K++ E + H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE-GTPSTAIREISLMKELKH 62
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND------DLTREHYQFFLYQL 135
+IV + ++ ++ + +VFE M++DL + + + L ++F +QL
Sbjct: 63 ENIVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
L+ L + H + HRDLKP+N+L N +LK+ DFGLAR AF P F ++ V T WY
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR-AFG-IPVNTFSSE-VVTLWY 174
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
RAP+ L GS Y+ +IDIWS GCI AE++TGKPLFPG N QL L+ D++GTP+
Sbjct: 175 RAPDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKF-PNA----DPSALRLLERLLAFDPKDRPTAEE 309
V K +Y +++++ P Q P+ D + + L LL +P R +A++
Sbjct: 233 WPSV--TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ 290
Query: 310 ALADPYF 316
AL P+F
Sbjct: 291 ALHHPWF 297
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 154
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 270
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 271 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 328
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 329 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 386
Query: 318 GL 319
L
Sbjct: 387 EL 388
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 225
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 226 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 283
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 284 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341
Query: 318 GL 319
L
Sbjct: 342 EL 343
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 113
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 229
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 230 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 287
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 288 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 345
Query: 318 GL 319
L
Sbjct: 346 EL 347
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 111
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 227
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 228 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 285
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 286 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 343
Query: 318 GL 319
L
Sbjct: 344 EL 345
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + A H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFAFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 23/303 (7%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 103
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 219
Query: 199 ELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
EL G+ + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 220 ELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-R 276
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 277 EMNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
Query: 317 KGL 319
L
Sbjct: 335 DEL 337
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 80
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 196
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 197 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 254
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 255 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 312
Query: 318 GL 319
L
Sbjct: 313 EL 314
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 88
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 204
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 205 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 262
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 263 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 320
Query: 318 GL 319
L
Sbjct: 321 EL 322
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 157/298 (52%), Gaps = 19/298 (6%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH--DIFEHISDAAXXXXXXXXXXXXXH 81
+Y+ E IG+G+YG V A + T E VA+K++ D E + +A H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--H 60
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KANDDLTREHYQFFLYQLLRALK 140
+IV + ++ K + +VFE + DL + N DL E + FL+QLL+ L
Sbjct: 61 KNIVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ H+ NV HRDLKP+N+L N N +LK+ +FGLAR AF P + + V T WYR P++
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDV 172
Query: 201 CGSFFSK-YTPAIDIWSIGCIFAEVL-TGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
F +K Y+ +ID+WS GCIFAE+ G+PLFPG +V QL + LLGTP+ + +
Sbjct: 173 L--FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 259 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K Y P + + LL+ LL +P R +AEEAL PYF
Sbjct: 231 T--KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + A H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 156/298 (52%), Gaps = 19/298 (6%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH--DIFEHISDAAXXXXXXXXXXXXXH 81
+Y+ E IG+G+YG V A + T E VA+K++ D E + +A H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--H 60
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KANDDLTREHYQFFLYQLLRALK 140
+IV + ++ K + +VFE + DL + N DL E + FL+QLL+ L
Sbjct: 61 KNIVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ H+ NV HRDLKP+N+L N N +LK+ DFGLAR AF P + + V T WYR P++
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDV 172
Query: 201 CGSFFSK-YTPAIDIWSIGCIFAEVL-TGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
F +K Y+ +ID+WS GCIFAE+ +PLFPG +V QL + LLGTP+ + +
Sbjct: 173 L--FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 259 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K Y P + + LL+ LL +P R +AEEAL PYF
Sbjct: 231 T--KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 23/303 (7%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + A H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 191
Query: 199 ELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
EL G+ + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-R 248
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 249 EMNPNYTEFAFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 KGL 319
L
Sbjct: 307 DEL 309
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 225
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 226 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 283
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 284 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341
Query: 318 GL 319
L
Sbjct: 342 EL 343
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 203
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 204 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 261
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 262 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 319
Query: 318 GL 319
L
Sbjct: 320 EL 321
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 79
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 195
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 196 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 253
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 254 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 311
Query: 318 GL 319
L
Sbjct: 312 EL 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 203
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 204 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 261
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 262 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 319
Query: 318 GL 319
L
Sbjct: 320 EL 321
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 94
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 210
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 211 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 268
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 269 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 326
Query: 318 GL 319
L
Sbjct: 327 EL 328
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 83
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 199
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 200 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 257
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 258 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 315
Query: 318 GL 319
L
Sbjct: 316 EL 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 76
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 192
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 193 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 250
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 251 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 308
Query: 318 GL 319
L
Sbjct: 309 EL 310
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 48/324 (14%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA---AXXXXXXXXXX 77
+ R++++ + G+G++G V + TG VAIKK+ I D
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV------IQDPRFRNRELQIMQDLA 74
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIY--VVFELMESDLHQVIKANDDLTREHY------- 128
HP+IV+++ RD +DIY VV E + LH+ R +Y
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC-------CRNYYRRQVAPP 127
Query: 129 ----QFFLYQLLRALKYIH--TANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTP 181
+ FL+QL+R++ +H + NV HRD+KP N+L N A+ LK+CDFG A+ P
Sbjct: 128 PILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187
Query: 182 TTIFWTDYVATRWYRAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ 239
Y+ +R+YRAPEL F YT A+DIWS+GCIFAE++ G+P+F G N Q
Sbjct: 188 NVA----YICSRYYRAPEL---IFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
Query: 240 LDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNAD----PSALRLLER 295
L + +LG PS + + ++ + + + +S F + A LL
Sbjct: 241 LHEIVRVLGCPSREVLRKLNPSHTD---VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSA 297
Query: 296 LLAFDPKDRPTAEEALADPYFKGL 319
LL + P++R EAL PYF L
Sbjct: 298 LLQYLPEERMKPYEALCHPYFDEL 321
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHIMLPPS-RRDFKDIYVVFELMESDLHQVIK----ANDDLTREHYQFFLYQLLRAL 139
V +++ ++D + +V + + +++V + A L + + ++YQL R+L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
YIH+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YRAP
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYRAP 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
EL + YT +ID+WS GC+ AE+L G+P+FPG + V QL + +LGTP+ + I R
Sbjct: 192 ELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 259 RNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
N + K P +++ F P P A+ L RLL + P R T EA A +F
Sbjct: 250 MNPNYTEFKFPQIKAHP--WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307
Query: 318 GL 319
L
Sbjct: 308 EL 309
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 154/312 (49%), Gaps = 43/312 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+ +G+G+YG V AIDT T E VAIK+I E H +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+E+K ++ R ++++FE E+DL + + N D++ + FLYQL+ + + H
Sbjct: 95 IIELKSVIHHNHR-----LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 144 TANVYHRDLKPKNIL-----ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
+ HRDLKP+N+L A+ LKI DFGLAR AF P F T + T WYR P
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFG-IPIRQF-THEIITLWYRPP 206
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
E L GS Y+ ++DIWSI CI+AE+L PLFPG + + QL + ++LG P
Sbjct: 207 EILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP------- 257
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLL-------------ERLLAFDPKDR 304
+D +T++ + Q FP L+ + +L DP R
Sbjct: 258 --DDTTWPGVTALP-----DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKR 310
Query: 305 PTAEEALADPYF 316
+A+ AL PYF
Sbjct: 311 ISAKNALEHPYF 322
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 159/315 (50%), Gaps = 24/315 (7%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAA-----XXXXXXXXX 76
A RY+ + +G+G + V A D +T + VAIKKI H S+A
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLL 66
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND-DLTREHYQFFLYQL 135
HP+I+ + S +I +VF+ ME+DL +IK N LT H + ++
Sbjct: 67 QELSHPNIIGLLDAFGHKS-----NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
L+ L+Y+H + HRDLKP N+L + N LK+ DFGLA+ +F +P + V TRWY
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK-SFG-SPNRAY-XHQVVTRWY 178
Query: 196 RAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
RAPEL F ++ Y +D+W++GCI AE+L P PG + + QL + + LGTP+ +
Sbjct: 179 RAPELL--FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
+ + Y+T + + F A L L++ L F+P R TA +AL
Sbjct: 237 WPDMCS--LPDYVT-FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293
Query: 315 YFKGLSKVEREPSCQ 329
YF ++ P CQ
Sbjct: 294 YFS--NRPGPTPGCQ 306
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 28/312 (8%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEK-VAIKKIHDI-------FEHISDAAXXXXXXXX 75
+Y+ IG+G+YG V A D G + VA+K++ I + A
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA----VLRH 67
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKA--NDDLTREHYQFFLY 133
HP++V + + + +VFE ++ DL + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVAT 192
QLLR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ +F T++ V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVT 182
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 183 LWYRAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEAL 311
+ R+ R + QP+ +KF + D LL + L F+P R +A AL
Sbjct: 241 EDWP--RDVALPRQAFHSKSAQPI---EKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLSKVE 323
+ PYF+ L + +
Sbjct: 296 SHPYFQDLERCK 307
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 16/305 (5%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y+ ++G+GSYG+V + TG VAIKK + + H +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN-DDLTREHYQFFLYQLLRALKYI 142
+V + + R Y+VFE ++ + ++ + L + Q +L+Q++ + +
Sbjct: 86 LVNLLEVCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LC 201
H+ N+ HRD+KP+NIL + + +K+CDFG AR P ++ D VATRWYRAPE L
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVY-DDEVATRWYRAPELLV 197
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT--PSLDTISRVR 259
G KY A+D+W+IGC+ E+ G+PLFPG + + QL + LG P +
Sbjct: 198 GDV--KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL 319
A L +++++P++ +++P + L ++ L DP RP E L +F+
Sbjct: 256 PVFAGVRLPEIKEREPLE--RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
Query: 320 SKVER 324
ER
Sbjct: 314 GFAER 318
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 28/312 (8%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEK-VAIKKIHDI-------FEHISDAAXXXXXXXX 75
+Y+ IG+G+YG V A D G + VA+K++ I + A
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA----VLRH 67
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKA--NDDLTREHYQFFLY 133
HP++V + + + +VFE ++ DL + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVAT 192
QLLR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ +F T++ V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVT 182
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 183 LWYRAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEAL 311
+ R+ R + QP+ +KF + D LL + L F+P R +A AL
Sbjct: 241 EDWP--RDVALPRQAFHSKSAQPI---EKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLSKVE 323
+ PYF+ L + +
Sbjct: 296 SHPYFQDLERCK 307
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 145/304 (47%), Gaps = 11/304 (3%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
+ S+Y+ IG+G++G V A TG+KVA+KK+ E
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIV---EIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KANDDLTREHYQFFLYQLL 136
H ++V EI P R IY+VF+ E DL ++ T + + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR---VAFNDTPTTIFWTDYVATR 193
L YIH + HRD+K N+L + LK+ DFGLAR +A N P + + V T
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR--YXNRVVTL 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
WYR PEL Y P ID+W GCI AE+ T P+ G HQL L++ L G+ + +
Sbjct: 194 WYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 254 TISRVRNDKARRYLTSMR-KKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
V N + L ++ +K+ V+ K DP AL L+++LL DP R +++AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 313 DPYF 316
+F
Sbjct: 313 HDFF 316
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 141/303 (46%), Gaps = 20/303 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH------DIFEHISDAAXXXXXXXXX 76
SRY+ IG G+YG V A D H+G VA+K +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFK-DIYVVFELMESDLHQVIKAND--DLTREHYQFFLY 133
HP++V + + SR D + + +VFE ++ DL + L E + +
Sbjct: 69 EAFEHPNVVRLMDVCAT-SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q LR L ++H + HRDLKP+NIL + +K+ DFGLAR+ + T V T
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALTPVVVTL 183
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P D
Sbjct: 184 WYRAPEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
R+ R R +PVQ P + S +LL +L F+P R +A AL
Sbjct: 242 DWP--RDVSLPRGAFPPRGPRPVQ--SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297
Query: 314 PYF 316
Y
Sbjct: 298 SYL 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 17/300 (5%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK--KIHDIFEHIS-DAAXXXXXXXXXXXX 79
SRY+ IG G+YG V A D H+G VA+K ++ + E +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHIMLPPSRRDFK-DIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLL 136
HP++V + + SR D + + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCAT-SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ + V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALAPVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P D
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
R+ R R +PVQ P + S +LL +L F+P R +A AL Y
Sbjct: 237 --RDVSLPRGAFPPRGPRPVQ--SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 145/300 (48%), Gaps = 17/300 (5%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK--KIHDIFEHIS-DAAXXXXXXXXXXXX 79
SRY+ IG G+YG V A D H+G VA+K ++ + E +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHIMLPPSRRDFK-DIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLL 136
HP++V + + SR D + + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCAT-SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ +F V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALF--PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P D
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
R+ R R +PVQ P + S +LL +L F+P R +A AL Y
Sbjct: 237 --RDVSLPRGAFPPRGPRPVQ--SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 28/306 (9%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEK-VAIKKIHDI-------FEHISDAAXXXXXXXX 75
+Y+ IG+G+YG V A D G + VA+K++ I + A
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA----VLRH 67
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKA--NDDLTREHYQFFLY 133
HP++V + + + +VFE ++ DL + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVAT 192
QLLR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ +F T++ V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVT 182
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 183 LWYRAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEAL 311
+ R+ R + QP+ +KF + D LL + L F+P R +A AL
Sbjct: 241 EDWP--RDVALPRQAFHSKSAQPI---EKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFK 317
+ PYF+
Sbjct: 296 SHPYFQ 301
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 17/300 (5%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK--KIHDIFEHIS-DAAXXXXXXXXXXXX 79
SRY+ IG G+YG V A D H+G VA+K ++ + E +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHIMLPPSRRDFK-DIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLL 136
HP++V + + SR D + + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCAT-SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ + V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALDPVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P D
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
R+ R R +PVQ P + S +LL +L F+P R +A AL Y
Sbjct: 237 --RDVSLPRGAFPPRGPRPVQ--SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 151/319 (47%), Gaps = 14/319 (4%)
Query: 6 RKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISD 65
++ +S E F E S+Y+ IG+G++G V A TG+KVA+KK+ E
Sbjct: 4 KQYDSVECPFCDE---VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 66 AAXXXXXXXXXXXXXHPDIV---EIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KAND 121
H ++V EI P R IY+VF+ E DL ++
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 122 DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR---VAFN 178
T + + LL L YIH + HRD+K N+L + LK+ DFGLAR +A N
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH 238
P + + V T WYR PEL Y P ID+W GCI AE+ T P+ G H
Sbjct: 181 SQPNR--YXNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 239 QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMR-KKQPVQFSQKFPNADPSALRLLERLL 297
QL L++ L G+ + + V N + L ++ +K+ V+ K DP AL L+++LL
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 298 AFDPKDRPTAEEALADPYF 316
DP R +++AL +F
Sbjct: 298 VLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 151/319 (47%), Gaps = 14/319 (4%)
Query: 6 RKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISD 65
++ +S E F E S+Y+ IG+G++G V A TG+KVA+KK+ E
Sbjct: 4 KQYDSVECPFCDE---VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 66 AAXXXXXXXXXXXXXHPDIV---EIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KAND 121
H ++V EI P R IY+VF+ E DL ++
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV 120
Query: 122 DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR---VAFN 178
T + + LL L YIH + HRD+K N+L + LK+ DFGLAR +A N
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH 238
P + + V T WYR PEL Y P ID+W GCI AE+ T P+ G H
Sbjct: 181 SQPNR--YXNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 239 QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMR-KKQPVQFSQKFPNADPSALRLLERLL 297
QL L++ L G+ + + V N + L ++ +K+ V+ K DP AL L+++LL
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 298 AFDPKDRPTAEEALADPYF 316
DP R +++AL +F
Sbjct: 298 VLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 151/319 (47%), Gaps = 14/319 (4%)
Query: 6 RKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISD 65
++ +S E F E S+Y+ IG+G++G V A TG+KVA+KK+ E
Sbjct: 3 KQYDSVECPFCDE---VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 66 AAXXXXXXXXXXXXXHPDIV---EIKHIMLPPSRRDFKDIYVVFELMESDLHQVI-KAND 121
H ++V EI P R IY+VF+ E DL ++
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 122 DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLAR---VAFN 178
T + + LL L YIH + HRD+K N+L + LK+ DFGLAR +A N
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH 238
P + + V T WYR PEL Y P ID+W GCI AE+ T P+ G H
Sbjct: 180 SQPNR--YXNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 236
Query: 239 QLDLMTDLLGTPSLDTISRVRNDKARRYLTSMR-KKQPVQFSQKFPNADPSALRLLERLL 297
QL L++ L G+ + + V N + L ++ +K+ V+ K DP AL L+++LL
Sbjct: 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 296
Query: 298 AFDPKDRPTAEEALADPYF 316
DP R +++AL +F
Sbjct: 297 VLDPAQRIDSDDALNHDFF 315
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 44/329 (13%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY++ +VIGKGS+G V A D + VA+K + + AA
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRAL 139
+ + + H++ + R+ I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 156 DNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 140 KYIHTANVYHRDLKPKNILANANCK--LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+H + H DLKP+NIL + +K+ DFG + T I +R+YRA
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI------QSRFYRA 267
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS---LDT 254
PE+ ++Y ID+WS+GCI AE+LTG PL PG++ QL M +LLG PS LD
Sbjct: 268 PEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325
Query: 255 ISRVRNDKAR----RYLT---------------SMRKK--QPVQFSQKFPNA-----DPS 288
R +N + RY T S R K P + S+++ NA DP
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE-SREWGNALKGCDDPL 384
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFK 317
L L++ L +DP R T +AL P+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 44/329 (13%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY++ +VIGKGS+G V A D + VA+K + + AA
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRAL 139
+ + + H++ + R+ I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 156 DNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 140 KYIHTANVYHRDLKPKNILANANCK--LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+H + H DLKP+NIL + +K+ DFG + T I +R+YRA
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI------QSRFYRA 267
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS---LDT 254
PE+ ++Y ID+WS+GCI AE+LTG PL PG++ QL M +LLG PS LD
Sbjct: 268 PEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325
Query: 255 ISRVRNDKAR----RYLT---------------SMRKK--QPVQFSQKFPNA-----DPS 288
R +N + RY T S R K P + S+++ NA DP
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE-SREWGNALKGCDDPL 384
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFK 317
L L++ L +DP R T +AL P+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 147/292 (50%), Gaps = 44/292 (15%)
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK------AND---DLTREHYQFF 131
HP+++ ++ + L + R ++++F+ E DL +IK AN L R +
Sbjct: 77 HPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNILANANC----KLKICDFGLARVAFNDTPTTIFWT 187
LYQ+L + Y+H V HRDLKP NIL ++KI D G AR+ FN +
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL-FNSPLKPLADL 192
Query: 188 D-YVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK-------NVVH 238
D V T WYRAPEL G+ YT AIDIW+IGCIFAE+LT +P+F + N H
Sbjct: 193 DPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250
Query: 239 --QLDLMTDLLGTPS---------LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADP 287
QLD + +++G P+ + S + D R T+ + ++ + P D
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP--DS 308
Query: 288 SALRLLERLLAFDPKDRPTAEEALADPYF--KGLSKVEREPSCQ-PISKMEF 336
A LL++LL DP R T+E+A+ DPYF L + CQ P K EF
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREF 360
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 44/329 (13%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY++ +VIGKG +G V A D + VA+K + + AA
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN--DDLTREHYQFFLYQLLRAL 139
+ + + H++ + R+ I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 156 DNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 140 KYIHTANVYHRDLKPKNILANANCK--LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+H + H DLKP+NIL + +K+ DFG + I +R+YRA
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXI------QSRFYRA 267
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS---LDT 254
PE+ ++Y ID+WS+GCI AE+LTG PL PG++ QL M +LLG P LD
Sbjct: 268 PEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDA 325
Query: 255 ISRVRNDKAR----RYLT---------------SMRKK--QPVQFSQKFPNA-----DPS 288
R +N + RY T S R K P + S+++ NA DP
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPE-SREWGNALKGCDDPL 384
Query: 289 ALRLLERLLAFDPKDRPTAEEALADPYFK 317
L L++ L +DP R T +AL P+ +
Sbjct: 385 FLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K I + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVK----ILKPVKKNKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKVA+K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N+L + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 47 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 102
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 103 LXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 157
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 213
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 214 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAY 272
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 273 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 329
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 330 ALEAMTHPYFQQVRAAE 346
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 82
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 83 LXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 137
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 194 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 310 ALEAMTHPYFQQVRAAE 326
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LMGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 28 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 83
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 84 LCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 138
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 195 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 253
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 254 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 310
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 311 ALEAMTHPYFQQVRAAE 327
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 82
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 83 LCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 137
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 194 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 310 ALEAMTHPYFQQVRAAE 326
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
++G+ Y++ +G+G Y V I+ + EK IK + + +
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKKKIKREIKILQN 81
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLR 137
P+IV++ I+ + K ++FE + + +V+ LT ++++Y+LL+
Sbjct: 82 LCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLK 136
Query: 138 ALKYIHTANVYHRDLKPKNILANANC-KLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA + VA+R+++
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFK 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSLDTI 255
PEL Y ++D+WS+GC+FA ++ K P F G + QL + +LGT L+
Sbjct: 193 GPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 256 ---SRVRNDKARRYLTSMRKKQPVQFSQKFPNAD------PSALRLLERLLAFDPKDRPT 306
R+ D L ++P KF NAD P A+ L++LL +D ++R T
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 307 AEEALADPYFKGLSKVE 323
A EA+ PYF+ + E
Sbjct: 309 ALEAMTHPYFQQVRAAE 325
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 28/322 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSKVEREPSC 328
A EA+ PYF + K + +P
Sbjct: 315 AREAMEHPYFYPVVKEQSQPCA 336
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 31 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 86
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 140
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 196
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 197 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 256 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 313
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 314 AREAMEHPYFYTVVK 328
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 31 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 86
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 140
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 196
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 197 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 256 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 313
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 314 AREAMEHPYFYTVVK 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 30 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 85
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 139
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 140 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 195
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 196 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 255 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 312
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 313 AREAMEHPYFYTVVK 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 37 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 92
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 93 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEIL 146
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 147 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 202
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 203 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 261
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 262 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 319
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 320 AREAMEHPYFYTVVK 334
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 18 EYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX 77
E+G+ Y++ +G+G Y V AI+ EKV +K + + +
Sbjct: 32 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILEN 87
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLL 136
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++L
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLRQT---LTDYDIRFYMYEIL 141
Query: 137 RALKYIHTANVYHRDLKPKNILAN-ANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+AL Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRYF 197
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTPSL-D 253
+ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT L D
Sbjct: 198 KGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 254 TISRVR-------NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
I + ND R+ S ++ + S+ P AL L++LL +D + R T
Sbjct: 257 YIDKYNIELDPRFNDILGRH--SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLSK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAIK I I A
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 78 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T T
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 187
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
Y APE+ S + Y A+D WS+G I L+G P F Q+ L D + + +
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSL-KDQITSGKYN 244
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
I V + AL L+++LL DPK R T EEAL
Sbjct: 245 FIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 314 PYFK 317
P+ +
Sbjct: 282 PWLQ 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAIK I I A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
Y APE+ S + Y A+D WS+G I L+G P F Q+ L D + + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSL-KDQITSGKYN 238
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
I V + AL L+++LL DPK R T EEAL
Sbjct: 239 FIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 314 PYFK 317
P+ +
Sbjct: 276 PWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAIK I I A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
Y APE+ S + Y A+D WS+G I L+G P F Q+ L D + + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSL-KDQITSGKYN 238
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
I V + AL L+++LL DPK R T EEAL
Sbjct: 239 FIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 314 PYFK 317
P+ +
Sbjct: 276 PWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAIK I I A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
Y APE+ S + Y A+D WS+G I L+G P F Q+ L D + + +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSL-KDQITSGKYN 238
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
I V + AL L+++LL DPK R T EEAL
Sbjct: 239 FIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 314 PYFK 317
P+ +
Sbjct: 276 PWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAIK I I A
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 71 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T T
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLCGTPT 180
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
Y APE+ S + Y A+D WS+G I L+G P F Q+ L D + + +
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--QVSL-KDQITSGKYN 237
Query: 254 TISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD 313
I V + AL L+++LL DPK R T EEAL
Sbjct: 238 FIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 314 PYFK 317
P+ +
Sbjct: 275 PWLQ 278
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 17/234 (7%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-A 161
+VFE + +D Q+ + LT +F++Y+LL+AL Y H+ + HRD+KP N++ +
Sbjct: 112 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
KL++ D+GLA + VA+R+++ PEL + Y ++D+WS+GC+
Sbjct: 169 QKKLRLIDWGLAEFYHPAQEYNV----RVASRYFKGPELLVD-YQMYDYSLDMWSLGCML 223
Query: 222 AE-VLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQ 280
A + +P F G++ QL + +LGT L + + + + + + +
Sbjct: 224 ASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWE 283
Query: 281 KFPNAD------PSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVEREPSC 328
F +++ P AL LL++LL +D + R TA+EA+ PYF + K + +PS
Sbjct: 284 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPSA 337
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 51/348 (14%)
Query: 13 MEFFSEYGD--ASRYKIQEVIGKGSYGVVCSAIDTHTGEK-VAIKKIHDIFEHISDAAXX 69
M + GD ++RY+I + +G+G++G V ID G + VA+K + ++ + +AA
Sbjct: 2 MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS 60
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDL--TREH 127
P+ + + + I +VFEL+ + IK N L +H
Sbjct: 61 EIQVLEHLNTTDPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDH 119
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNIL-------------------ANANCKLKIC 168
+ YQ+ +++ ++H+ + H DLKP+NIL N +K+
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 169 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
DFG A ++D + V+TR YRAPE+ + ++ D+WSIGCI E G
Sbjct: 180 DFGSA--TYDDEHHSTL----VSTRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGF 231
Query: 229 PLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK--------------ARRYLTSMRKKQ 274
+FP + L +M +LG I + R K A RY++ R +
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS--RACK 289
Query: 275 PV-QFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
P+ +F L++++L +DP R T EAL P+F L K
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAI+ I I A
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 211 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T++ T T
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 320
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL-MTDLLGTPSL 252
Y APE+ S + Y A+D WS+G I L+G P F H+ + + D + +
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE----HRTQVSLKDQITSGKY 376
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
+ I V + AL L+++LL DPK R T EEAL
Sbjct: 377 NFIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
Query: 313 DPYFK 317
P+ +
Sbjct: 414 HPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y + + +G G+ G V A + T +KVAI+ I I A
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP I++IK+ D +D Y+V ELME +L + N L + + YQ+L
Sbjct: 197 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 138 ALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
A++Y+H + HRDLKP+N+L ++ +C +KI DFG +++ T++ T T
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 306
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL-MTDLLGTPSL 252
Y APE+ S + Y A+D WS+G I L+G P F H+ + + D + +
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE----HRTQVSLKDQITSGKY 362
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
+ I V + AL L+++LL DPK R T EEAL
Sbjct: 363 NFIPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399
Query: 313 DPYFK 317
P+ +
Sbjct: 400 HPWLQ 404
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 51/348 (14%)
Query: 13 MEFFSEYGD--ASRYKIQEVIGKGSYGVVCSAIDTHTGEK-VAIKKIHDIFEHISDAAXX 69
M + GD ++RY+I + +G+G++G V ID G + VA+K + ++ + +AA
Sbjct: 2 MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS 60
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDL--TREH 127
P+ + + + I +VFEL+ + IK N L +H
Sbjct: 61 EIQVLEHLNTTDPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDH 119
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNIL-------------------ANANCKLKIC 168
+ YQ+ +++ ++H+ + H DLKP+NIL N +K+
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 169 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
DFG A ++D + V R YRAPE+ + ++ D+WSIGCI E G
Sbjct: 180 DFGSA--TYDDEHHSTL----VXXRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGF 231
Query: 229 PLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK--------------ARRYLTSMRKKQ 274
+FP + L +M +LG I + R K A RY++ R +
Sbjct: 232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS--RACK 289
Query: 275 PV-QFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
P+ +F L++++L +DP R T EAL P+F L K
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 125/306 (40%), Gaps = 43/306 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY I ++GKGS+G V D T ++ A+K I+ D + H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+I+++ I+ D Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEIL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y+H N+ HRDLKP+NIL + +C +KI DFGL+ +T D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
PE+ Y D+WS G I +L+G P F GKN D + R
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN---------------EYDILKR 233
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V K L R A L+ ++L F P R TA + L P+ +
Sbjct: 234 VETGKYAFDLPQWR------------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Query: 318 GLSKVE 323
S E
Sbjct: 282 KYSSEE 287
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY I ++GKGS+G V D T ++ A+K I+ D + H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+I+++ I+ D Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEIL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y+H N+ HRDLKP+NIL + +C +KI DFGL+ +T D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
PE+ Y D+WS G I +L+G P F GKN D + R
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN---------------EYDILKR 233
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V K L R A L+ ++L F P R TA + L P+ +
Sbjct: 234 VETGKYAFDLPQWR------------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Query: 318 GLS 320
S
Sbjct: 282 KYS 284
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN-A 161
+VFE + +D Q+ + LT +F++Y+LL+AL Y H+ + HRD+KP N++ +
Sbjct: 117 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
KL++ D+GLA + VA+R+++ PEL + Y ++D+WS+GC+
Sbjct: 174 QKKLRLIDWGLAEFYHPAQEYNV----RVASRYFKGPELLVD-YQMYDYSLDMWSLGCML 228
Query: 222 AE-VLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQ 280
A + +P F G++ QL + +LGT L + + + + + + +
Sbjct: 229 ASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWE 288
Query: 281 KFPNAD------PSALRLLERLLAFDPKDRPTAEEALADPYF 316
F +++ P AL LL++LL +D + R TA+EA+ PYF
Sbjct: 289 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
A RY I ++GKGS+G V D T ++ A+K I+ D + H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+I+++ I+ D Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEIL-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y+H N+ HRDLKP+NIL + +C +KI DFGL+ +T D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
PE+ Y D+WS G I +L+G P F GKN D + R
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN---------------EYDILKR 233
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V K L R A L+ ++L F P R TA + L P+ +
Sbjct: 234 VETGKYAFDLPQWR------------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Query: 318 GLS 320
S
Sbjct: 282 KYS 284
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 132/311 (42%), Gaps = 47/311 (15%)
Query: 20 GDASRYKIQEV-IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
GD Y + IG+GS G+VC A + HTG++VA+KK+ D+ +
Sbjct: 41 GDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM-DLRKQ-QRRELLFNEVVIMRD 98
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H ++V++ L +++VV E +E I + + E +LRA
Sbjct: 99 YHHDNVVDMYSSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRA 153
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
L Y+H V HRD+K +IL ++ ++K+ DFG + P V T ++ AP
Sbjct: 154 LSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR---KXLVGTPYWMAP 210
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRV 258
E+ Y +DIWS+G + E++ G+P + P L + R+
Sbjct: 211 EVISRL--PYGTEVDIWSLGIMVIEMIDGEPPY---------------FNEPPLQAMRRI 253
Query: 259 RNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
R+ R K + S LR L+ +L +P R TA+E L P+
Sbjct: 254 RDSLPPRV--------------KDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL- 298
Query: 318 GLSKVEREPSC 328
K+ PSC
Sbjct: 299 ---KLAGPPSC 306
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+I +IGKGS+G V A D E VAIK I + ++ A
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 111
Query: 84 IVEIKHIMLPPSRR-DFKD-IYVVFELMESDLHQVIKAND------DLTREHYQFFLYQL 135
E+K+ ++ R F++ + +VFE++ +L+ +++ + +LTR+ F Q+
Sbjct: 112 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK----FAQQM 166
Query: 136 LRALKYIHT--ANVYHRDLKPKNILAN--ANCKLKICDFGLARVAFNDTPTTIFWTDYVA 191
AL ++ T ++ H DLKP+NIL +KI DFG + I+ +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG----SSCQLGQRIY--QXIQ 220
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P
Sbjct: 221 SRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
Query: 252 LDTISRVRNDKARRYLTSM 270
+ + KAR++ +
Sbjct: 279 AHILDQA--PKARKFFEKL 295
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 32/260 (12%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+I +IGKGS+G V A D E VAIK I + ++ A
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 111
Query: 84 IVEIKHIMLPPSRR-DFKD-IYVVFELMESDLHQVIKAND------DLTREHYQFFLYQL 135
E+K+ ++ R F++ + +VFE++ +L+ +++ + +LTR+ F Q+
Sbjct: 112 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK----FAQQM 166
Query: 136 LRALKYIHT--ANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYV 190
AL ++ T ++ H DLKP+NIL N K +KI DFG + I+ +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILL-CNPKRXAIKIVDFG----SSCQLGQRIY--QXI 219
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
+R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P
Sbjct: 220 QSRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
Query: 251 SLDTISRVRNDKARRYLTSM 270
+ + KAR++ +
Sbjct: 278 PAHILDQA--PKARKFFEKL 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
RY+I +IGKGS+G V A D E VAIK I + ++ A
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 92
Query: 84 IVEIKHIMLPPSRR-DFKD-IYVVFELMESDLHQVIKAND------DLTREHYQFFLYQL 135
E+K+ ++ R F++ + +VFE++ +L+ +++ + +LTR+ F Q+
Sbjct: 93 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK----FAQQM 147
Query: 136 LRALKYIHT--ANVYHRDLKPKNILAN--ANCKLKICDFGLARVAFNDTPTTIFWTDYVA 191
AL ++ T ++ H DLKP+NIL +KI DFG + I+ +
Sbjct: 148 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG----SSCQLGQRIY--QXIQ 201
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P
Sbjct: 202 SRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
Query: 252 LDTISRVRNDKARRYLTSM 270
+ + KAR++ +
Sbjct: 260 AHILDQA--PKARKFFEKL 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 41/305 (13%)
Query: 13 MEFFSEYGDASRYKIQEV-IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX 71
++ + GD Y + IG+GS G+VC A +G+ VA+KK+
Sbjct: 140 LQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFN 197
Query: 72 XXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFF 131
H ++VE+ + L +++VV E +E I + + E
Sbjct: 198 EVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 252
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVA 191
+L+AL +H V HRD+K +IL + ++K+ DFG + P V
Sbjct: 253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVG 309
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
T ++ APEL Y P +DIWS+G + E++ G+P + P
Sbjct: 310 TPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPY---------------FNEPP 352
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEAL 311
L + +R++ R L ++ K PS L+RLL DP R TA E L
Sbjct: 353 LKAMKMIRDNLPPR-LKNLHK------------VSPSLKGFLDRLLVRDPAQRATAAELL 399
Query: 312 ADPYF 316
P+
Sbjct: 400 KHPFL 404
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 61/344 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGE-KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY+I +G+G++G V +D G+ +VA+K I ++ ++ A
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 88
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALK 140
+ + +++ + + FEL+ + + +K N+ H + YQL AL+
Sbjct: 89 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 146
Query: 141 YIHTANVYHRDLKPKNIL-------------------ANANCKLKICDFGLARVAFNDTP 181
++H + H DLKP+NIL + N +++ DFG A ++
Sbjct: 147 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-HEHH 205
Query: 182 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
TTI VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 206 TTI-----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 258
Query: 242 LMTDLLGTPSLDTISRVR--------------NDKARRY-------LTSMRKKQPVQFSQ 280
+M +LG I R R N RY L S + ++ Q
Sbjct: 259 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 318
Query: 281 KFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVER 324
F L+ R+L FDP R T EAL P+F GL+ ER
Sbjct: 319 LFD--------LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 61/344 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGE-KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY+I +G+G++G V +D G+ +VA+K I ++ ++ A
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALK 140
+ + +++ + + FEL+ + + +K N+ H + YQL AL+
Sbjct: 112 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 169
Query: 141 YIHTANVYHRDLKPKNIL-------------------ANANCKLKICDFGLARVAFNDTP 181
++H + H DLKP+NIL + N +++ DFG A ++
Sbjct: 170 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-HEHH 228
Query: 182 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
TTI VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 229 TTI-----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 281
Query: 242 LMTDLLGTPSLDTISRVR--------------NDKARRY-------LTSMRKKQPVQFSQ 280
+M +LG I R R N RY L S + ++ Q
Sbjct: 282 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 341
Query: 281 KFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVER 324
F L+ R+L FDP R T EAL P+F GL+ ER
Sbjct: 342 LFD--------LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 377
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 61/344 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGE-KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY+I +G+G++G V +D G+ +VA+K I ++ ++ A
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALK 140
+ + +++ + + FEL+ + + +K N+ H + YQL AL+
Sbjct: 80 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 137
Query: 141 YIHTANVYHRDLKPKNIL-------------------ANANCKLKICDFGLARVAFNDTP 181
++H + H DLKP+NIL + N +++ DFG A ++
Sbjct: 138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-HEHH 196
Query: 182 TTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
TTI VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 197 TTI-----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 242 LMTDLLGTPSLDTISRVR--------------NDKARRY-------LTSMRKKQPVQFSQ 280
+M +LG I R R N RY L S + ++ Q
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309
Query: 281 KFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKVER 324
F L+ R+L FDP R T EAL P+F GL+ ER
Sbjct: 310 LFD--------LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 345
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK+ H ++VE+ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 140 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 249
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + P L + +R++ R L ++
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAMKMIRDNLPPR-LKNL 293
Query: 271 RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K PS L+RLL DP R TA E L P+
Sbjct: 294 HK------------VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXHPD 83
Y I+E +G+GS+G V A T +KVA+K I SD HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+++ ++ P+ DI +V E +L I +T + + F Q++ A++Y H
Sbjct: 71 IIKLYDVITTPT-----DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC-G 202
+ HRDLKP+N+L + N +KI DFGL+ + + F + Y APE+ G
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVING 181
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
++ P +D+WS G + +L G+ F + + P+L
Sbjct: 182 KLYA--GPEVDVWSCGIVLYVMLVGRLPFDDEFI-------------PNL---------- 216
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ + S P S P A L+ R++ DP R T +E DP+F
Sbjct: 217 -FKKVNSCVYVMPDFLS-------PGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK+ H ++VE+ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 97 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 206
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + P L + +R++ R L ++
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAMKMIRDNLPPR-LKNL 250
Query: 271 RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K PS L+RLL DP R TA E L P+
Sbjct: 251 HK------------VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK+ H ++VE+ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 95 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 204
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + P L + +R++ R L ++
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAMKMIRDNLPPR-LKNL 248
Query: 271 RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K PS L+RLL DP R TA E L P+
Sbjct: 249 HK------------VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK+ H ++VE+ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 86 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 195
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + P L + +R++ R L ++
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAMKMIRDNLPPR-LKNL 239
Query: 271 RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K PS L+RLL DP R TA E L P+
Sbjct: 240 HK------------VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK+ H ++VE+ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 90 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 199
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + P L + +R++ R L ++
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPY---------------FNEPPLKAMKMIRDNLPPR-LKNL 243
Query: 271 RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
K PS L+RLL DP R TA E L P+
Sbjct: 244 HK------------VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 42/287 (14%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A + H+G +VA+K + H ++VE+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD--LRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L ++++V+ E ++ I + L E +L+AL Y+H V HR
Sbjct: 111 YLVG-----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG D P V T ++ APE+ S Y
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISR--SLYAT 220
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSM 270
+DIWS+G + E++ G+P + + V + R+R+ + L +
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQ---------------AMKRLRDSPPPK-LKNS 264
Query: 271 RKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYF 316
K PV LR LER+L DP++R TA+E L P+
Sbjct: 265 HKVSPV-------------LRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXH 81
Y+I + +G+GS+G V A T TG+KVA+K I+ SD H
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P I+++ ++ + +I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 74 PHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +KI DFGL+ + + F + Y APE +
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
G ++ P +D+WS G I +L + F +++ P L + N
Sbjct: 185 SGKLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI-------------PVL--FKNISN 227
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V KF P A L++R+L +P +R + E + D +FK
Sbjct: 228 G--------------VYTLPKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXH 81
Y+I + +G+GS+G V A T TG+KVA+K I+ SD H
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P I+++ ++ + +I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 73 PHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 127
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +KI DFGL+ + + F + Y APE +
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
G ++ P +D+WS G I +L + F +++ P L + N
Sbjct: 184 SGKLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI-------------PVL--FKNISN 226
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V KF P A L++R+L +P +R + E + D +FK
Sbjct: 227 G--------------VYTLPKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXH 81
Y+I + +G+GS+G V A T TG+KVA+K I+ SD H
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P I+++ ++ + +I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 68 PHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +KI DFGL+ + + F + Y APE +
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
G ++ P +D+WS G I +L + F +++ P L + N
Sbjct: 179 SGKLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI-------------PVL--FKNISN 221
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V KF P A L++R+L +P +R + E + D +FK
Sbjct: 222 G--------------VYTLPKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA-AXXXXXXXXXXXXXH 81
Y+I + +G+GS+G V A T TG+KVA+K I+ SD H
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P I+++ ++ + +I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 64 PHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +KI DFGL+ + + F + Y APE +
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 174
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
G ++ P +D+WS G I +L + F +++ P L + N
Sbjct: 175 SGKLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI-------------PVL--FKNISN 217
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
V KF P A L++R+L +P +R + E + D +FK
Sbjct: 218 G--------------VYTLPKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 54/309 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHIS-------DAAXXXXXXXXX 76
+Y ++VIG+G VV + TG + A+K + E +S A
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQL 135
HP I I L S +++VF+LM + +L + L+ + + + L
Sbjct: 155 QVAGHPHI-----ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSL 209
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
L A+ ++H N+ HRDLKP+NIL + N ++++ DFG + + P + T Y
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF---SCHLEPGEKL-RELCGTPGY 265
Query: 196 RAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD---LLG 248
APE+ + P +D+W+ G I +L G P F + + L ++ +
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 249 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAE 308
+P D S D L+ RLL DP+ R TAE
Sbjct: 326 SPEWDDRSSTVKD------------------------------LISRLLQVDPEARLTAE 355
Query: 309 EALADPYFK 317
+AL P+F+
Sbjct: 356 QALQHPFFE 364
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 77/347 (22%)
Query: 24 RYKIQEVIGKGSYGVVCSAID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY+I +G+G++G V +D G +VA+K I ++ E +AA P
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNV-EKYKEAARLEINVLEKINEKDP 92
Query: 83 DIVEIKHIMLPPSRRDFKDIY----VVFELMESDLHQVIKANDDLTREHYQF--FLYQLL 136
D + M D+ D + + FEL+ +K N+ L +Q +QL
Sbjct: 93 DNKNLCVQMF-----DWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLC 147
Query: 137 RALKYIHTANVYHRDLKPKNIL-ANANCKL------------------KICDFGLARVAF 177
+A+K++H + H DLKP+NIL N++ +L ++ DFG A
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDH 207
Query: 178 NDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
T V+TR YRAPE+ ++ D+WSIGCI E G LF +
Sbjct: 208 EHHSTI------VSTRHYRAPEVILEL--GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNR 259
Query: 238 HQLDLMTDLLGTPSLDTISRVRNDK-------------------------ARRYLTSMRK 272
L +M +LG I + R K RRYLTS +
Sbjct: 260 EHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAE 319
Query: 273 KQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL 319
+ F L+E +L ++P R T EAL P+F L
Sbjct: 320 EHHQLFD------------LIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 139/334 (41%), Gaps = 48/334 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+ Y ++E +GKG++ VV + TG + A K I+ D H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+IV + + S Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 88 PNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 141 YIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 198
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDT 254
PE+ Y+ +DIW+ G I +L G P F ++ + Q+ +P DT
Sbjct: 199 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 256
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
++ P A L++ +L +PK R TA++AL P
Sbjct: 257 VT------------------------------PEAKSLIDSMLTVNPKKRITADQALKVP 286
Query: 315 YFKGLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
+ +V Q +F RR K I
Sbjct: 287 WICNRERVASAIHRQDTVDCLKKFNARRKLKGAI 320
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 25 YKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHD--IFEHISDAAXXXXXXXXXXXX 79
+++ V+GKG YG V +TG+ A+K + I + D A
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
HP IV++ + + +Y++ E L +L ++ + F+L ++ A
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + +D T + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HTFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
E+ S + A+D WS+G + ++LTG P F G+N +D
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 25 YKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHD--IFEHISDAAXXXXXXXXXXXX 79
+++ V+GKG YG V +TG+ A+K + I + D A
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
HP IV++ + + +Y++ E L +L ++ + F+L ++ A
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + +D T + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HXFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
E+ S + A+D WS+G + ++LTG P F G+N +D
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 133/308 (43%), Gaps = 57/308 (18%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX----XXXXXXXXX 80
Y++ EVIGKG++ VV I+ TG++ A+K I D+ + S
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDL-HQVIKAND------DLTREHYQFFL 132
HP IVE +L D +Y+VFE M+ +DL +++K D + HY +
Sbjct: 85 HPHIVE----LLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY---M 136
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDY 189
Q+L AL+Y H N+ HRD+KP+N+L + + +K+ DFG VA + +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG---VAIQLGESGLVAGGR 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T + APE+ Y +D+W G I +L+G F G
Sbjct: 194 VGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------- 237
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
R + K + +++ + SA L+ R+L DP +R T E
Sbjct: 238 --------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283
Query: 310 ALADPYFK 317
AL P+ K
Sbjct: 284 ALNHPWLK 291
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 44/313 (14%)
Query: 10 SPEMEFFSEYGDASR-YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX 68
+P M S+ G S Y+ + +G G+YG V D T + AIK I S +
Sbjct: 23 TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREH 127
HP+I+++ D ++ Y+V E + +L I
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFF-----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVD 137
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTI 184
+ Q+L + Y+H N+ HRDLKP+N+L + K +KI DFGL+ V N
Sbjct: 138 AAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM-- 195
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ + T +Y APE+ KY D+WSIG I +L G P F G+ T
Sbjct: 196 --KERLGTAYYIAPEV---LRKKYDEKCDVWSIGVILFILLAGYPPFGGQ---------T 241
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
D + L + K + S ++ N A L++++L FD + R
Sbjct: 242 D------------------QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR 283
Query: 305 PTAEEALADPYFK 317
+A++AL P+ K
Sbjct: 284 ISAQQALEHPWIK 296
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 48/245 (19%)
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKA---NDDLTREHYQFFLYQL 135
HP+I++I + D+ ++Y+V E E L +++ A L+ + + Q+
Sbjct: 79 HPNIIKIFEVF-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 136 LRALKYIHTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
+ AL Y H+ +V H+DLKP+NIL + + +KI DFGLA + +D + T+ T
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS----TNAAGT 189
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
Y APE+ F T DIWS G + +LTG F G SL
Sbjct: 190 ALYMAPEV---FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGT----------------SL 230
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
+ + + K Y R P+ P A+ LL+++L DP+ RP+A + L
Sbjct: 231 EEVQQKATYKEPNYAVECR---PLT---------PQAVDLLKQMLTKDPERRPSAAQVLH 278
Query: 313 DPYFK 317
+FK
Sbjct: 279 HEWFK 283
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 48/308 (15%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+ Y ++E +GKG++ VV + TG + A K I+ D H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+IV + + S Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 64 PNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 141 YIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 174
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDT 254
PE+ Y+ +DIW+ G I +L G P F ++ + Q+ +P DT
Sbjct: 175 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 232
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
++ P A L++ +L +PK R TA++AL P
Sbjct: 233 VT------------------------------PEAKSLIDSMLTVNPKKRITADQALKVP 262
Query: 315 YFKGLSKV 322
+ +V
Sbjct: 263 WICNRERV 270
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 48/308 (15%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+ Y ++E +GKG++ VV + TG + A K I+ D H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+IV + + S Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 65 PNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 141 YIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 175
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDT 254
PE+ Y+ +DIW+ G I +L G P F ++ + Q+ +P DT
Sbjct: 176 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
++ P A L++ +L +PK R TA++AL P
Sbjct: 234 VT------------------------------PEAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 315 YFKGLSKV 322
+ +V
Sbjct: 264 WICNRERV 271
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 132/328 (40%), Gaps = 47/328 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E IGKG++ VV + TG + A K I+ D H +I
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNI 65
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V + + S F Y+VF+L+ +L + I A + + + Q+L A+ + H
Sbjct: 66 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 144 TANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
V HRDLKP+N+L + CK +K+ DFGLA D W + T Y +PE+
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y +DIW+ G I +L G P F ++ + Q+ +P DT++
Sbjct: 178 LRK--EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVT- 234
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P A L+ ++L +P R TA EAL P+
Sbjct: 235 -----------------------------PEAKNLINQMLTINPAKRITAHEALKHPWVC 265
Query: 318 GLSKVEREPSCQPISKMEFEFERRRVTK 345
S V Q + +F RR K
Sbjct: 266 QRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 48/302 (15%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+ Y ++E +GKG++ VV + TG + A K I+ D H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P+IV + + S Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 65 PNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 141 YIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 175
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDT 254
PE+ Y+ +DIW+ G I +L G P F ++ + Q+ +P DT
Sbjct: 176 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
++ P A L++ +L +PK R TA++AL P
Sbjct: 234 VT------------------------------PEAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 315 YF 316
+
Sbjct: 264 WI 265
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 21/264 (7%)
Query: 17 SEYGDASRYKIQEVIGKGSYG---VVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXX 73
SE D S +++ +V+G+GS+G +V +G A+K + + D
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 74 XXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFL 132
HP +V++ + + +Y++ + + DL + T E +F+L
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
+L L ++H+ + +RDLKP+NIL + +K+ DFGL++ A + + T
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY---SFCGT 193
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL-LGTPS 251
Y APE+ ++ + D WS G + E+LTG F GK+ + L+ LG P
Sbjct: 194 VEYMAPEVVNR--QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP- 250
Query: 252 LDTISRVRNDKARRYLTSMRKKQP 275
+ + +A+ L ++ K+ P
Sbjct: 251 -----QFLSTEAQSLLRALFKRNP 269
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 44/305 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD-IFEHISDAAXXXXXXXXXXXXX 80
+ RYK Q V+GKGS+G V D TG++ A+K I + +D
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+++ D Y+V E+ +L I + + + Q+L +
Sbjct: 91 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 140 KYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y+H + HRDLKP+N+L + K ++I DFGL+ F + D + T +Y
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYYI 201
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ Y D+WS G I +L+G P F G N D +
Sbjct: 202 APEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---------------EYDILK 243
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+V K L +K SA L+ ++L + P R +A +AL +
Sbjct: 244 KVEKGKYTFELPQWKK------------VSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
Query: 317 KGLSK 321
+ +K
Sbjct: 292 QTYTK 296
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 130/312 (41%), Gaps = 58/312 (18%)
Query: 17 SEYGDASRY-KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXX 75
S GD ++Y ++ IG+GS+G V A+ T + A KKI F + D
Sbjct: 19 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEI 76
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFEL------MESDLHQVIKANDDLTREHYQ 129
HP+I+ + D DIY+V EL E +H+ + D R
Sbjct: 77 MKSLDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---- 127
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFW 186
+ +L A+ Y H NV HRDLKP+N L + + LK+ DFGLA F P +
Sbjct: 128 -IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFK--PGKMMR 183
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T V T +Y +P++ Y P D WS G + +L G P F TD
Sbjct: 184 TK-VGTPYYVSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAP---------TD- 229
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRP 305
+ + ++R F +K + N P A L+ RLL PK R
Sbjct: 230 -----XEVMLKIREGT-------------FTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 271
Query: 306 TAEEALADPYFK 317
T+ +AL +F+
Sbjct: 272 TSLQALEHEWFE 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 23/261 (8%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD-IFEHISDAAXXXXXXXXXXXXX 80
+ RYK Q V+GKGS+G V D TG++ A+K I + +D
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFEL-MESDLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+++ D Y+V E+ +L I + + + Q+L +
Sbjct: 108 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 162
Query: 140 KYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y+H + HRDLKP+N+L + K ++I DFGL+ F + D + T +Y
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYYI 218
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLD 253
APE+ Y D+WS G I +L+G P F G N ++ +++ P
Sbjct: 219 APEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 275
Query: 254 TISRVRNDKARRYLT---SMR 271
+S D R+ LT SMR
Sbjct: 276 KVSESAKDLIRKMLTYVPSMR 296
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 23/261 (8%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD-IFEHISDAAXXXXXXXXXXXXX 80
+ RYK Q V+GKGS+G V D TG++ A+K I + +D
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFEL-MESDLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+++ D Y+V E+ +L I + + + Q+L +
Sbjct: 109 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 163
Query: 140 KYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y+H + HRDLKP+N+L + K ++I DFGL+ F + D + T +Y
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYYI 219
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLD 253
APE+ Y D+WS G I +L+G P F G N ++ +++ P
Sbjct: 220 APEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
Query: 254 TISRVRNDKARRYLT---SMR 271
+S D R+ LT SMR
Sbjct: 277 KVSESAKDLIRKMLTYVPSMR 297
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F++ DAS KI++VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 22 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ K + ++ E ME+ L ++ ND T
Sbjct: 82 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 125 REHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
L + +KY+ + HRDL +NIL N+N K+ DFG++RV D P
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 188
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE + K+T A D+WS G + EV++
Sbjct: 189 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 128/312 (41%), Gaps = 58/312 (18%)
Query: 17 SEYGDASRY-KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXX 75
S GD ++Y ++ IG+GS+G V A+ T + A KKI F + D
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEI 59
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFEL------MESDLHQVIKANDDLTREHYQ 129
HP+I+ + D DIY+V EL E +H+ + D R
Sbjct: 60 MKSLDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---- 110
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFW 186
+ +L A+ Y H NV HRDLKP+N L + + LK+ DFGLA F P +
Sbjct: 111 -IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFK--PGKMMR 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T V T +Y +P++ Y P D WS G + +L G P F
Sbjct: 167 TK-VGTPYYVSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAPT----------- 211
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRP 305
+ + ++R F +K + N P A L+ RLL PK R
Sbjct: 212 ----DXEVMLKIREGT-------------FTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 254
Query: 306 TAEEALADPYFK 317
T+ +AL +F+
Sbjct: 255 TSLQALEHEWFE 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 47/262 (17%)
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+++ + D K Y+V E E +L + I + Q+L +
Sbjct: 105 HPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGI 159
Query: 140 KYIHTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y+H N+ HRD+KP+NIL N+ +KI DFGL+ D D + T +Y
Sbjct: 160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL----RDRLGTAYYI 215
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ KY D+WS G I +L G P F G+N D I
Sbjct: 216 APEVLK---KKYNEKCDVWSCGVIMYILLCGYPPFGGQN---------------DQDIIK 257
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+V +K + Y F+ + N A L++ +L +D R TAEEAL +
Sbjct: 258 KV--EKGKYYF---------DFND-WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
Query: 317 K----GLSKVEREPSCQPISKM 334
K ++K +++ C +S M
Sbjct: 306 KKYANNINKSDQKTLCGALSNM 327
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 126/305 (41%), Gaps = 44/305 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD-IFEHISDAAXXXXXXXXXXXXX 80
+ RYK Q V+GKGS+G V D TG++ A+K I + +D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+++ D Y+V E+ +L I + + + Q+L +
Sbjct: 85 HPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 140 KYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y+H + HRDLKP+N+L + K ++I DFGL+ F + D + T +Y
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYYI 195
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ Y D+WS G I +L+G P F G N D +
Sbjct: 196 APEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---------------EYDILK 237
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+V K L +K SA L+ ++L + P R +A +AL +
Sbjct: 238 KVEKGKYTFELPQWKK------------VSESAKDLIRKMLTYVPSMRISARDALDHEWI 285
Query: 317 KGLSK 321
+ +K
Sbjct: 286 QTYTK 290
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG+YG+V + D ++AIK+I + D+ H I
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 90 IMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ---FFLYQLLRALKYIHTAN 146
+ S F I++ ++ L ++++ +++ Q F+ Q+L LKY+H
Sbjct: 84 YLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 147 VYHRDLKPKNILANA-NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N + LKI DFG ++ P T + T Y APE+
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT---ETFTGTLQYMAPEIIDKGP 199
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIFEHISDAAXXXXX 72
F++ DAS KI+ VIG G +G VCS G++ VAIK + +
Sbjct: 36 FAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE-KQRRDFLCE 94
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFF 131
HP++V ++ ++ K + +V E ME+ A D R+H QF
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRG-----KPVMIVIEFMENG------ALDAFLRKHDGQFT 143
Query: 132 LYQLLRALKYIHTANVY-------HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
+ QL+ L+ I Y HRDL +NIL N+N K+ DFGL+RV D P +
Sbjct: 144 VIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAV 202
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE + K+T A D+WS G + EV++
Sbjct: 203 YTTTGGKIPVRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 47/331 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV + ++ A K I+ D HP+I
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V + + S F Y+VF+L+ +L + I A + + ++Q+L ++ +IH
Sbjct: 93 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 144 TANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
++ HRDLKP+N+L + CK +K+ DFGLA + W + T Y +PE+
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA---WFGFAGTPGYLSPEV 204
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y +DIW+ G I +L G P F ++ + Q+ +P DT++
Sbjct: 205 LRK--DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVT- 261
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P A L+ ++L +P R TA++AL P+
Sbjct: 262 -----------------------------PEAKNLINQMLTINPAKRITADQALKHPWVC 292
Query: 318 GLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
S V Q + +F RR K I
Sbjct: 293 QRSTVASMMHRQETVECLRKFNARRKLKGAI 323
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 18 EYGDASRYKIQEVIGKGSYG---VVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXX 74
E D S++++ +V+G+GS+G +V + + A+K + + D
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 75 XXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
HP IV++ + + +Y++ + + DL + T E +F+L
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+L AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + + T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 190
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y APE+ +T + D WS G + E+LTG F GK+
Sbjct: 191 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 123/297 (41%), Gaps = 47/297 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPD 83
Y + + +G G++G V TG KVA+K ++ + HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+++ ++ PS DI++V E + +L I N L + + Q+L + Y
Sbjct: 78 IIKLYQVISTPS-----DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L +A+ KI DFGL+ + + F + Y APE +
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRXSCGSPNYAAPEVIS 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD-LLGTPSLDTISRVRN 260
G ++ P +DIWS G I +L G F +V + D + TP
Sbjct: 189 GRLYA--GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---------- 236
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+YL +PS + LL+ +L DP R T ++ +FK
Sbjct: 237 ----QYL------------------NPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F++ DAS KI++VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ K + ++ E ME+ L ++ ND T
Sbjct: 67 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 114
Query: 125 REHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
L + +KY+ + HRDL +NIL N+N K+ DFG++RV D P
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 173
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE + K+T A D+WS G + EV++
Sbjct: 174 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 41/231 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F++ D S KI++VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 26 FAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEA 85
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTR 125
+ HP+++ ++ ++ + + ++ E ME+ L ++ ND
Sbjct: 86 SIMGQFD-------HPNVIHLEGVVTKST-----PVMIITEFMENGSLDSFLRQNDG--- 130
Query: 126 EHYQFFLYQLLRAL-------KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
QF + QL+ L KY+ N HRDL +NIL N+N K+ DFGL+R +
Sbjct: 131 ---QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 179 DT--PT-TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
DT PT T + RW APE + K+T A D+WS G + EV++
Sbjct: 188 DTSDPTYTSALGGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG+YG+V + D ++AIK+I + D+ H I
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 90 IMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQ---FFLYQLLRALKYIHTAN 146
+ S F I++ ++ L ++++ +++ Q F+ Q+L LKY+H
Sbjct: 70 YLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 147 VYHRDLKPKNILANA-NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N + LKI DFG ++ P T + T Y APE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT---ETFTGTLQYMAPEIIDKGP 185
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A+D TG++VAI++++ + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL + +K+ DFG TP ++ V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
Y P +DIWS+G + E++ G+P + +N + L L+ GTP L
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL----------- 236
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ P + S F + L R L D + R +A+E L + K
Sbjct: 237 ---------QNPEKLSAIFRD-------FLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 18 EYGDASRYKIQEVIGKGSYG---VVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXX 74
E D S++++ +V+G+GS+G +V + + A+K + + D
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 75 XXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
HP IV++ + + +Y++ + + DL + T E +F+L
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+L AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + + T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 190
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y APE+ +T + D WS G + E+LTG F GK+
Sbjct: 191 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHI 63
MEF E D S KI+EVIG G +G VC G+K VAIK + + E +
Sbjct: 5 MEFAKEI-DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 63
Query: 64 SDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDD 122
S+A+ HP+I+ ++ ++ + + ++ E ME+ L ++ ND
Sbjct: 64 SEASIMGQFE-------HPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDG 111
Query: 123 LTREHYQFFLYQLLRALKYIHTANVY-------HRDLKPKNILANANCKLKICDFGLARV 175
QF + QL+ L+ I + Y HRDL +NIL N+N K+ DFGL+R
Sbjct: 112 ------QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 165
Query: 176 AFNDTPTTIFWTDY---VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
++ + + + RW APE F K+T A D WS G + EV++
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRW-TAPEAIA--FRKFTSASDAWSYGIVMWEVMS 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 18 EYGDASRYKIQEVIGKGSYG---VVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXX 74
E D S++++ +V+G+GS+G +V + + A+K + + D
Sbjct: 20 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 79
Query: 75 XXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
HP IV++ + + +Y++ + + DL + T E +F+L
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 134
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+L AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + + T
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 191
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y APE+ +T + D WS G + E+LTG F GK+
Sbjct: 192 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKD 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 51/308 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
Y ++V+G G++ V A D T + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTIS 256
+ Y+ A+D WSIG I +L G P F +N + Q+ +P D IS
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
D A+ ++ + +K DP+ R T E+AL P+
Sbjct: 247 ----DSAKDFIRHLMEK--------------------------DPEKRFTCEQALQHPWI 276
Query: 317 KGLSKVER 324
G + +++
Sbjct: 277 AGDTALDK 284
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F++ DAS KI++VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ K + ++ E ME+ L ++ ND T
Sbjct: 61 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 108
Query: 125 REHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
L + +KY+ + HRDL +NIL N+N K+ DFG++RV D P
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 167
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE + K+T A D+WS G + EV++
Sbjct: 168 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 51/308 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
Y ++V+G G++ V A D T + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTIS 256
+ Y+ A+D WSIG I +L G P F +N + Q+ +P D IS
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
D A+ ++ + +K DP+ R T E+AL P+
Sbjct: 247 ----DSAKDFIRHLMEK--------------------------DPEKRFTCEQALQHPWI 276
Query: 317 KGLSKVER 324
G + +++
Sbjct: 277 AGDTALDK 284
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 51/308 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
Y ++V+G G++ V A D T + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTIS 256
+ Y+ A+D WSIG I +L G P F +N + Q+ +P D IS
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
D A+ ++ + +K DP+ R T E+AL P+
Sbjct: 247 ----DSAKDFIRHLMEK--------------------------DPEKRFTCEQALQHPWI 276
Query: 317 KGLSKVER 324
G + +++
Sbjct: 277 AGDTALDK 284
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 44/302 (14%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXX 78
G + RY+ + +G G+YG V D TG + AIK I S++
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP+I+++ D ++ Y+V E+ +L I + + Q+L
Sbjct: 78 LDHPNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 138 ALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRW 194
Y+H N+ HRDLKP+N+L + + +KI DFGL+ A + + + + T +
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKM--KERLGTAY 188
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ KY D+WS G I +L G P F G+ TD +
Sbjct: 189 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQ---------TDQ------EI 230
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
+ RV K P ++Q A +L++ +L ++P R +AEEAL P
Sbjct: 231 LKRVEKGKFSF--------DPPDWTQ----VSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 315 YF 316
+
Sbjct: 279 WI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 49/307 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y ++V+G G++ V A D T + VAIK I + + HP+I
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V + I +Y++ +L+ +L I T ++Q+L A+KY+H
Sbjct: 79 VALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 144 TANVYHRDLKPKNIL---ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + + K+ I DFGL+++ + P ++ T T Y APE+
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPEV 189
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y+ A+D WSIG I +L G P F +N + Q+ +P D IS
Sbjct: 190 LAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS- 246
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
D A+ ++ + +K DP+ R T E+AL P+
Sbjct: 247 ---DSAKDFIRHLMEK--------------------------DPEKRFTCEQALQHPWIA 277
Query: 318 GLSKVER 324
G + +++
Sbjct: 278 GDTALDK 284
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A+D TG++VAI++++ + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL + +K+ DFG TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
Y P +DIWS+G + E++ G+P + +N + L L+ GTP L
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL----------- 236
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ P + S F + L R L D + R +A+E L + K
Sbjct: 237 ---------QNPEKLSAIFRD-------FLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 41/231 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F++ D S KI+EVIG G +G VC G+K VAIK + + E +S+A
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 68
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDLTR 125
+ HP+I+ ++ ++ + + ++ E ME+ L ++ ND
Sbjct: 69 SIMGQFE-------HPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDG--- 113
Query: 126 EHYQFFLYQLLRALKYIHTANVY-------HRDLKPKNILANANCKLKICDFGLARVA-- 176
QF + QL+ L+ I + Y HRDL +NIL N+N K+ DFGL+R
Sbjct: 114 ---QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 177 -FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+D T + RW APE F K+T A D WS G + EV++
Sbjct: 171 NSSDPTETSSLGGKIPIRW-TAPEAIA--FRKFTSASDAWSYGIVMWEVMS 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 152/362 (41%), Gaps = 64/362 (17%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXX 78
G + RY+ + +G G+YG V D TG + AIK I S++
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP+I+++ D ++ Y+V E+ +L I + + Q+L
Sbjct: 61 LDHPNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 138 ALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRW 194
Y+H N+ HRDLKP+N+L + + +KI DFGL+ A + + + + T +
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKM--KERLGTAY 171
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ KY D+WS G I +L G P F G+ TD +
Sbjct: 172 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQ---------TDQ------EI 213
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADP 314
+ RV K P ++Q A +L++ +L ++P R +AEEAL P
Sbjct: 214 LKRVEKGKFSF--------DPPDWTQ----VSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 315 YF-----------------KGLSKVEREPSCQPISKMEFEFERRRVTK-EDIREL--IFR 354
+ L +++ S Q +++ F ++T E+ +EL IFR
Sbjct: 262 WIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFR 321
Query: 355 EI 356
++
Sbjct: 322 QL 323
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 1 MQQDHRKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIH 57
M + N EF E +AS I+ VIG G +G VCS G++ VAIK +
Sbjct: 1 MPHTYEDPNQAVHEFAKEI-EASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK 59
Query: 58 DIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQV 116
+ HP+I+ ++ ++ K + +V E ME+ L
Sbjct: 60 VGYTE-KQRRDFLGEASIMGQFDHPNIIHLEGVVTKS-----KPVMIVTEYMENGSLDTF 113
Query: 117 IKANDDLTREHYQFFLYQLLRAL-------KYIHTANVYHRDLKPKNILANANCKLKICD 169
+K ND QF + QL+ L KY+ HRDL +NIL N+N K+ D
Sbjct: 114 LKKNDG------QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 167
Query: 170 FGLARVAFNDTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
FGL+RV D P + T + RW APE F K+T A D+WS G + EV++
Sbjct: 168 FGLSRV-LEDDPEAAYTTRGGKIPIRW-TAPEAIA--FRKFTSASDVWSYGIVMWEVVS 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A+D TG++VAI++++ + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL + +K+ DFG TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
Y P +DIWS+G + E++ G+P + +N + L L+ GTP L
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL----------- 236
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ P + S F + L R L D + R +A+E L + K
Sbjct: 237 ---------QNPEKLSAIFRD-------FLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 133/331 (40%), Gaps = 47/331 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV + TG++ A K I+ D HP+I
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V + + S F Y+VF+L+ +L + I A + + + Q+L ++ + H
Sbjct: 66 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 144 TANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + K +K+ DFGLA D W + T Y +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y +D+W+ G I +L G P F ++ + Q+ +P DT++
Sbjct: 178 LRK--DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT- 234
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P A L+ ++L +P R TA EAL P+
Sbjct: 235 -----------------------------PEAKDLINKMLTINPAKRITASEALKHPWIC 265
Query: 318 GLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
S V Q +F RR K I
Sbjct: 266 QRSTVASMMHRQETVDCLKKFNARRKLKGAI 296
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX-XXXHPD 83
+K+ ++GKGS+ V A HTG +VAIK I + + HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKAN-DDLTREHYQFFLYQLLRALKY 141
I+E+ + D +Y+V E+ + ++++ +K + + F++Q++ + Y
Sbjct: 73 ILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H+ + HRDL N+L N +KI DFGLA P +T T Y +PE+
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYT-LCGTPNYISPEIA 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
S + D+WS+GC+F +L G+P F V + L+
Sbjct: 185 TR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A+D TG++VAI++++ + +P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL + +K+ DFG TP + V T ++ APE+
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
Y P +DIWS+G + E++ G+P + +N + L L+ GTP L
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL----------- 237
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ P + S F + L R L D + R +A+E + + K
Sbjct: 238 ---------QNPEKLSAIFRD-------FLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 47/313 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG++VA+K I + S HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPEL 200
H + HRDLK +N+L +A+ +KI DFG + F + T + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPEL 183
Query: 201 CGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
KY P +D+WS+G I +++G F G+N+
Sbjct: 184 FQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----------------------- 218
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-G 318
+ R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 219 -KELRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVG 270
Query: 319 LSKVEREPSCQPI 331
E +P +P+
Sbjct: 271 HEDDELKPYVEPL 283
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 48/269 (17%)
Query: 103 YVVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILA- 159
Y+ EL + L + ++ D L E L Q L ++H+ N+ HRDLKP NIL
Sbjct: 94 YIAIELCAATLQEYVEQKDFAHLGLEPITL-LQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
Query: 160 --NANCKLK--ICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY-TPAIDI 214
NA+ K+K I DFGL + + + T + APE+ + T +DI
Sbjct: 153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212
Query: 215 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQ 274
+S GC+F V++ GK++ Q ++ LLG SLD + +++
Sbjct: 213 FSAGCVFYYVISEGSHPFGKSLQRQANI---LLGACSLDCLHPEKHE------------- 256
Query: 275 PVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK-----------VE 323
D A L+E+++A DP+ RP+A+ L P+F L K +E
Sbjct: 257 -----------DVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIE 305
Query: 324 REPSCQPISKMEFEFERRRVTKEDIRELI 352
+E PI K + E R V K D RE I
Sbjct: 306 KESLDGPIVK-QLERGGRAVVKMDWRENI 333
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 123/305 (40%), Gaps = 44/305 (14%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD-IFEHISDAAXXXXXXXXXXXXX 80
+ RYK Q V+GKGS+G V D TG++ A+K I + +D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I ++ D Y+V E+ +L I + + + Q+L +
Sbjct: 85 HPNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 140 KYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
Y H + HRDLKP+N+L + K ++I DFGL+ F + D + T +Y
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKX---KDKIGTAYYI 195
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ Y D+WS G I +L+G P F G N D +
Sbjct: 196 APEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---------------EYDILK 237
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+V K L +K SA L+ + L + P R +A +AL +
Sbjct: 238 KVEKGKYTFELPQWKK------------VSESAKDLIRKXLTYVPSXRISARDALDHEWI 285
Query: 317 KGLSK 321
+ +K
Sbjct: 286 QTYTK 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 124/305 (40%), Gaps = 52/305 (17%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX--X 79
A Y++ IG GSYG C I + K+ + K D + +++A
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI----KANDDLTREHYQFFLYQ 134
HP+IV ++ R +Y+V E E DL VI K L E + Q
Sbjct: 63 KHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 135 LLRALKYIHTAN-----VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
L ALK H + V HRDLKP N+ + +K+ DFGLAR+ +DT F +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKTF 176
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T +Y +PE Y DIWS+GC+ E+ L P Q +L
Sbjct: 177 VGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCA---LMPPFTAFSQKELA------ 225
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
++R K RR P ++S + ++ R+L RP+ EE
Sbjct: 226 ------GKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEE 264
Query: 310 ALADP 314
L +P
Sbjct: 265 ILENP 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 133/331 (40%), Gaps = 47/331 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV + TG++ A K I+ D HP+I
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V + + S F Y+VF+L+ +L + I A + + + Q+L ++ + H
Sbjct: 66 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 144 TANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + K +K+ DFGLA D W + T Y +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y +D+W+ G I +L G P F ++ + Q+ +P DT++
Sbjct: 178 LRK--DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT- 234
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P A L+ ++L +P R TA EAL P+
Sbjct: 235 -----------------------------PEAKDLINKMLTINPAKRITASEALKHPWIC 265
Query: 318 GLSKVEREPSCQPISKMEFEFERRRVTKEDI 348
S V Q +F RR K I
Sbjct: 266 QRSTVASMMHRQETVDCLKKFNARRKLKGAI 296
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 129/308 (41%), Gaps = 57/308 (18%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX----XXXXXXXXX 80
Y++ EVIGKG + VV I+ TG++ A+K I D+ + S
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDL-HQVIKAND------DLTREHYQFFL 132
HP IVE +L D +Y+VFE M+ +DL +++K D + HY +
Sbjct: 87 HPHIVE----LLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY---M 138
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDY 189
Q+L AL+Y H N+ HRD+KP +L + + +K+ FG VA + +
Sbjct: 139 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG---VAIQLGESGLVAGGR 195
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T + APE+ Y +D+W G I +L+G F G
Sbjct: 196 VGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------- 239
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
R + K + +++ + SA L+ R+L DP +R T E
Sbjct: 240 --------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 285
Query: 310 ALADPYFK 317
AL P+ K
Sbjct: 286 ALNHPWLK 293
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 124/305 (40%), Gaps = 52/305 (17%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX--X 79
A Y++ IG GSYG C I + K+ + K D + +++A
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI----KANDDLTREHYQFFLYQ 134
HP+IV ++ R +Y+V E E DL VI K L E + Q
Sbjct: 63 KHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 135 LLRALKYIHTAN-----VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
L ALK H + V HRDLKP N+ + +K+ DFGLAR+ +DT F +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKAF 176
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T +Y +PE Y DIWS+GC+ E+ L P Q +L
Sbjct: 177 VGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCA---LMPPFTAFSQKELA------ 225
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
++R K RR P ++S + ++ R+L RP+ EE
Sbjct: 226 ------GKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEE 264
Query: 310 ALADP 314
L +P
Sbjct: 265 ILENP 269
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 16 FSEYGDAS--RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-----------KIHDIFEH 62
F E D + ++I IGKGS+G VC T + A+K ++ ++F+
Sbjct: 6 FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 63 ISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKAND 121
+ HP +V + + S +D +D+++V +L+ DL ++ N
Sbjct: 66 LQ----------IMQGLEHPFLVNLWY-----SFQDEEDMFMVVDLLLGGDLRYHLQQNV 110
Query: 122 DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTP 181
E + F+ +L+ AL Y+ + HRD+KP NIL + + + I DF +A + +T
Sbjct: 111 HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 182 TTIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGK 228
T T+ Y APE+ S + Y+ A+D WS+G E+L G+
Sbjct: 171 ITTM----AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS+G T G + IK+I+ + HP+IV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE- 90
Query: 91 MLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQF--FLYQLLRALKYIHTANV 147
S + +Y+V + E DL + I A + + Q + Q+ ALK++H +
Sbjct: 91 ----SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
HRD+K +NI + +++ DFG+ARV T + T +Y +PE+C +
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEICEN--KP 201
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPG---KNVVHQL 240
Y DIW++GC+ E+ T K F KN+V ++
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG +VAIK I + + HP+I
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V++ ++ K +Y++ E ++ + A+ + + + Q++ A++Y H
Sbjct: 74 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +A+ +KI DFG + N+ + + Y APEL
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDTFCGSPPYAAPELFQG 184
Query: 204 FFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
KY P +D+WS+G I +++G F G+N+ +
Sbjct: 185 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------KE 218
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-GLSK 321
R + + + P S N LL+R L +P R T E+ + D + G +
Sbjct: 219 LRERVLRGKYRIPFYMSTDCEN-------LLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 271
Query: 322 VEREPSCQP 330
E +P +P
Sbjct: 272 DELKPFVEP 280
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 47/311 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA++ I + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRDLK +N+L +A+ +KI DFG + F + T + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPELFQ 185
Query: 203 SFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
KY P +D+WS+G I +++G F G+N+
Sbjct: 186 G--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------K 219
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-GLS 320
+ R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 220 ELRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
Query: 321 KVEREPSCQPI 331
E +P +P+
Sbjct: 273 DDELKPYVEPL 283
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 129/308 (41%), Gaps = 57/308 (18%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX----XXXXXXXXX 80
Y++ EVIGKG + VV I+ TG++ A+K I D+ + S
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDL-HQVIKAND------DLTREHYQFFL 132
HP IVE +L D +Y+VFE M+ +DL +++K D + HY +
Sbjct: 85 HPHIVE----LLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY---M 136
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDY 189
Q+L AL+Y H N+ HRD+KP +L + + +K+ FG VA + +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG---VAIQLGESGLVAGGR 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T + APE+ Y +D+W G I +L+G F G
Sbjct: 194 VGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------- 237
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
R + K + +++ + SA L+ R+L DP +R T E
Sbjct: 238 --------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283
Query: 310 ALADPYFK 317
AL P+ K
Sbjct: 284 ALNHPWLK 291
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 47/313 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG++VA+K I + S HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPEL 200
H + HRDLK +N+L +A+ +KI DFG + F + T + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPEL 183
Query: 201 CGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
KY P +D+WS+G I +++G F G+N+
Sbjct: 184 FQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----------------------- 218
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-G 318
+ R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 219 -KELRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVG 270
Query: 319 LSKVEREPSCQPI 331
E +P P+
Sbjct: 271 HEDDELKPYVAPL 283
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF----EHISDAAXXXXXXXXXXXX 79
RYKI + +G G V A DT KVAIK IF E
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKA---IFIPPREKEETLKRFEREVHNSSQL 68
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV M+ D Y+V E +E L + I+++ L+ + F Q+L
Sbjct: 69 SHQNIVS----MIDVDEED-DCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG 123
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-ATRWYRA 197
+K+ H + HRD+KP+NIL ++N LKI DFG+A+ + T++ T++V T Y +
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL---SETSLTQTNHVLGTVQYFS 180
Query: 198 PELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
PE G + T DI+SIG + E+L G+P F G+ V
Sbjct: 181 PEQAKGEATDECT---DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 47/313 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG++VA+K I + S HP
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 67 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPEL 200
H + HRDLK +N+L +A+ +KI DFG + F + T + + Y APEL
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPEL 176
Query: 201 CGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
KY P +D+WS+G I +++G F G+N+
Sbjct: 177 FQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----------------------- 211
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-G 318
+ R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 212 -KELRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVG 263
Query: 319 LSKVEREPSCQPI 331
E +P +P+
Sbjct: 264 HEDDELKPYVEPL 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA++ I + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +A+ +KI DFG + N+ ++ + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 204 FFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
KY P +D+WS+G I +++G F G+N+ +
Sbjct: 187 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------KE 220
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-GLSK 321
R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
Query: 322 VEREPSCQPI 331
E +P +P+
Sbjct: 274 DELKPYVEPL 283
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 119/293 (40%), Gaps = 41/293 (13%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E IG G + V A TGE VAIK I D SD H I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
++ H++ ++ I++V E +L I + D L+ E + Q++ A+ Y+H
Sbjct: 71 CQLYHVLETANK-----IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ HRDLKP+N+L + KLK+ DFGL + + + Y APEL
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL--QTCCGSLAYAAPELIQG 183
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
S D+WS+G + ++ G F NV+
Sbjct: 184 -KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-------------------------- 216
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
Y MR K V PS++ LL+++L DPK R + + L P+
Sbjct: 217 ALYKKIMRGKYDVP-----KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 176 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 229
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 230 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNE-----YSIPK------- 262
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 263 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 114 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 174 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 227
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 228 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNE-----YSIPK------- 260
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 261 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 90 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 150 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 203
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 204 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNE-----YSIPK------- 236
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 237 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 47/307 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S Y++ E +GKG++ VV + G++ A K I+ D HP
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 81
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV L S + Y++F+L+ +L + I A + + + Q+L A+ +
Sbjct: 82 NIVR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 142 IHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
H V HRDLKP+N+L + K +K+ DFGLA + W + T Y +P
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSP 193
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTI 255
E+ Y +D+W+ G I +L G P F ++ + Q+ +P DT+
Sbjct: 194 EVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 251
Query: 256 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPY 315
+ P A L+ ++L +P R TA EAL P+
Sbjct: 252 T------------------------------PEAKDLINKMLTINPSKRITAAEALKHPW 281
Query: 316 FKGLSKV 322
S V
Sbjct: 282 ISHRSTV 288
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++Q+ IGKG++ V A TG +VA+K I + + HP
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 75 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
H + HRDLK +N+L + + +KI DFG + N+ + + Y APEL
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFS----NEFTVGNKLDTFCGSPPYAAPELF 185
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
KY P +D+WS+G I +++G F G+N+
Sbjct: 186 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG +VAIK I + + HP
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y++ E ++ + A+ + + + Q++ A++Y
Sbjct: 75 NIVKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +KI DFG + N+ + Y APEL
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGAPPYAAPELF 185
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
KY P +D+WS+G I +++G F G+N+
Sbjct: 186 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------ 219
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-GL 319
+ R + + + P S N LL+R L +P R T E+ + D + G
Sbjct: 220 KELRERVLRGKYRIPFYMSTDCEN-------LLKRFLVLNPIKRGTLEQIMKDRWINAGH 272
Query: 320 SKVEREPSCQP 330
+ E +P +P
Sbjct: 273 EEDELKPFVEP 283
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 124/305 (40%), Gaps = 52/305 (17%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXX--XX 79
A Y++ IG GSYG C I + K+ + K D + +++A
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI----KANDDLTREHYQFFLYQ 134
HP+IV ++ R +Y+V E E DL VI K L E + Q
Sbjct: 63 KHPNIVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 135 LLRALKYIHTAN-----VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
L ALK H + V HRDLKP N+ + +K+ DFGLAR+ +D F ++
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED---FAKEF 176
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
V T +Y +PE Y DIWS+GC+ E+ L P Q +L
Sbjct: 177 VGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCA---LMPPFTAFSQKELA------ 225
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
++R K RR P ++S + ++ R+L RP+ EE
Sbjct: 226 ------GKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEE 264
Query: 310 ALADP 314
L +P
Sbjct: 265 ILENP 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A+D TG++VAI++++ + +P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HR++K NIL + +K+ DFG TP + V T ++ APE+
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
Y P +DIWS+G + E++ G+P + +N + L L+ GTP L
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL----------- 237
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
+ P + S F + L R L D + R +A+E + + K
Sbjct: 238 ---------QNPEKLSAIFRD-------FLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 46/233 (19%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++ ++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
+ +KI DFGLA ++ F+ D T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK--ARRYLTSMRKKQPV 276
CI +L GKP F T L +T R++ ++ R++
Sbjct: 230 CILYTLLVGKPPFE-----------TSCLK----ETYIRIKKNEYSVPRHI--------- 265
Query: 277 QFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF-KGLSKVEREPSC 328
+P A L+ R+L DP RP+ E L D +F G + + SC
Sbjct: 266 ---------NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC 309
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 45/312 (14%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG++VA+K I + S HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +KI DFG + N+ + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
KY P +D+WS+G I +++G F G+N+
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------ 218
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK-GL 319
+ R + + + P S N LL++ L +P R T E+ + D + G
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCEN-------LLKKFLILNPSKRGTLEQIMKDRWMNVGH 271
Query: 320 SKVEREPSCQPI 331
E +P +P+
Sbjct: 272 EDDELKPYVEPL 283
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 117/299 (39%), Gaps = 50/299 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y ++E IG GSY + T + A+K I S HP+I
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-----SKRDPSEEIEILLRYGQHPNI 83
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ +K + D K +Y+V ELM +L I + F L+ + + ++Y+H
Sbjct: 84 ITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 144 TANVYHRDLKPKNIL-----ANANCKLKICDFGLARV--AFNDTPTTIFWTDYVATRWYR 196
+ V HRDLKP NIL N C L+ICDFG A+ A N T +T +
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTAN-----FV 192
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
APE+ Y DIWS+G + +L G T PS
Sbjct: 193 APEVLKR--QGYDEGCDIWSLGILLYTMLAG---------------YTPFANGPS----- 230
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPY 315
D LT + + + +A L+ ++L DP R TA++ L P+
Sbjct: 231 ----DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDAAXXXX 71
D S KI++VIG G +G VCS G++ VAIK + + + +S+A+
Sbjct: 5 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 72 XXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQF 130
HP+++ ++ ++ + + ++ E ME+ L ++ ND QF
Sbjct: 65 FD-------HPNVIHLEGVVTKST-----PVMIITEFMENGSLDSFLRQNDG------QF 106
Query: 131 FLYQLLRAL-------KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT--P 181
+ QL+ L KY+ N HR L +NIL N+N K+ DFGL+R +DT P
Sbjct: 107 TVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 182 T-TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
T T + RW APE + K+T A D+WS G + EV++
Sbjct: 167 TYTSALGGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 57/297 (19%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D +++EV+G+G++GVVC A + VAIK+I E S+
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVN 59
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDL---TREHYQFFLYQLL 136
HP+IV++ L P + +V E E L+ V+ + L T H + Q
Sbjct: 60 HPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 137 RALKYIHTAN---VYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVAT 192
+ + Y+H+ + HRDLKP N+L A LKICDFG A D T + T+ +
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM--TNNKGS 166
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
+ APE+ S Y+ D++S G I EV+T + F D +G P+
Sbjct: 167 AAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAF 211
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
+ V N + ++ K P++ L+ R + DP RP+ EE
Sbjct: 212 RIMWAVHNGTRPPLIKNLPK--PIE-------------SLMTRCWSKDPSQRPSMEE 253
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 120/309 (38%), Gaps = 50/309 (16%)
Query: 15 FFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXX 74
+F + Y ++E IG GSY + T + A+K I S
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-----SKRDPSEEIEI 73
Query: 75 XXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
HP+I+ +K + D K +Y+V ELM +L I + F L+
Sbjct: 74 LLRYGQHPNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 134 QLLRALKYIHTANVYHRDLKPKNIL-----ANANCKLKICDFGLARV--AFNDTPTTIFW 186
+ + ++Y+H+ V HRDLKP NIL N C L+ICDFG A+ A N T +
Sbjct: 129 TIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCY 187
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
T + APE+ Y DIWS+G + +L G T
Sbjct: 188 TAN-----FVAPEVLKR--QGYDEGCDIWSLGILLYTMLAG---------------YTPF 225
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
PS D LT + + + +A L+ ++L DP R T
Sbjct: 226 ANGPS---------DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT 276
Query: 307 AEEALADPY 315
A++ L P+
Sbjct: 277 AKQVLQHPW 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++ ++Y+H V HRDLK N+ N
Sbjct: 101 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
+ +KI DFGLA ++ F+ D T Y APE LC ++ +DIWS+G
Sbjct: 161 DDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKK---GHSFEVDIWSLG 213
Query: 219 CIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQF 278
CI +L GKP F T L +T R++ ++
Sbjct: 214 CILYTLLVGKPPFE-----------TSCLK----ETYIRIKKNE---------------- 242
Query: 279 SQKFP-NADPSALRLLERLLAFDPKDRPTAEEALADPYF-KGLSKVEREPSC 328
P + +P A L+ R+L DP RP+ E L D +F G + + SC
Sbjct: 243 -YSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC 293
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 57/297 (19%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D +++EV+G+G++GVVC A + VAIK+I E S+
Sbjct: 7 DYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVN 60
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDL---TREHYQFFLYQLL 136
HP+IV++ L P + +V E E L+ V+ + L T H + Q
Sbjct: 61 HPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 137 RALKYIHTAN---VYHRDLKPKNILANANCK-LKICDFGLARVAFNDTPTTIFWTDYVAT 192
+ + Y+H+ + HRDLKP N+L A LKICDFG A D T + T+ +
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM--TNNKGS 167
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
+ APE+ S Y+ D++S G I EV+T + F D +G P+
Sbjct: 168 AAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAF 212
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
+ V N + ++ K P++ L+ R + DP RP+ EE
Sbjct: 213 RIMWAVHNGTRPPLIKNLPK--PIE-------------SLMTRCWSKDPSQRPSMEE 254
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 96 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 156 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 209
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 210 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNE-----YSIPK------- 242
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 243 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 152 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 205
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 206 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNEY-----SIPK------- 238
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 239 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGLARV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ +Y+H V HRDLK N+ N
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 152 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 205
Query: 220 IFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFS 279
I +L GKP F T L +T R++ ++ S+ K
Sbjct: 206 IMYTLLVGKPPFE-----------TSCLK----ETYLRIKKNEY-----SIPK------- 238
Query: 280 QKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+ +P A L++++L DP RPT E L D +F
Sbjct: 239 ----HINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 46/308 (14%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G+GS+ + + + + A+K I E A HP+IV++ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRME----ANTQKEITALKLCEGHPNIVKLHEV 74
Query: 91 MLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYH 149
D ++V EL+ +L + IK + + + +L+ A+ ++H V H
Sbjct: 75 F-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 150 RDLKPKNIL---ANANCKLKICDFGLARVAFNDT---PTTIFWTDYVATRWYRAPELCGS 203
RDLKP+N+L N N ++KI DFG AR+ D T F T Y APEL
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF------TLHYAAPELLNQ 183
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ Y + D+WS+G I +L+G+ F + L T +++ + ++
Sbjct: 184 --NGYDESCDLWSLGVILYTMLSGQVPFQSHD--------RSLTCTSAVEIMKKI----- 228
Query: 264 RRYLTSMRKKQPVQF-SQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSKV 322
KK F + + N A L++ LL DP R + + + S++
Sbjct: 229 --------KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL 280
Query: 323 EREPSCQP 330
P P
Sbjct: 281 SSNPLMTP 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 143/362 (39%), Gaps = 56/362 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV + G++ A I+ D HP+I
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V L S + Y++F+L+ +L + I A + + + Q+L A+ + H
Sbjct: 73 VR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 144 TANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
V HR+LKP+N+L + K +K+ DFGLA + W + T Y +PE+
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEV 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTISR 257
Y +D+W+ G I +L G P F ++ + Q+ +P DT++
Sbjct: 185 LRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT- 241
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P A L+ ++L +P R TA EAL P+
Sbjct: 242 -----------------------------PEAKDLINKMLTINPSKRITAAEALKHPWIS 272
Query: 318 GLSKVEREPSCQPISKMEFEFERRRVTKEDIRELIF---------REILEYHPQLLKDYM 368
S V Q +F RR K I ++ +EI++ QL++
Sbjct: 273 HRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAIS 332
Query: 369 NG 370
NG
Sbjct: 333 NG 334
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 128/328 (39%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T + APE+ Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIF-----GTPAFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 57/318 (17%)
Query: 17 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-------EHISDA--A 67
S +G Y+ +E++G+G VV I T ++ A+K I D+ E + + A
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREA 69
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTRE 126
HP+I+++K + ++VF+LM+ +L + L+ +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKD-----TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFW 186
+ + LL + +H N+ HRDLKP+NIL + + +K+ DFG + D +
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL-- 180
Query: 187 TDYVATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDL 242
+ T Y APE+ + P +D+WS G I +L G P F + + L +
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 243 MTD---LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAF 299
+ G+P D S D L+ R L
Sbjct: 241 IMSGNYQFGSPEWDDYSDTVKD------------------------------LVSRFLVV 270
Query: 300 DPKDRPTAEEALADPYFK 317
P+ R TAEEALA P+F+
Sbjct: 271 QPQKRYTAEEALAHPFFQ 288
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 221
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 222 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPD 83
++I +G GS+G V H G A+K + +I + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +D + I+++ + +E +L +++ + +F+ ++ AL+Y+
Sbjct: 68 IIRMWGTF-----QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ ++ +RDLKP+NIL + N +KI DFG A+ + T DY+ APE+
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYI------APEVVS 176
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
+ Y +ID WS G + E+L G F N +
Sbjct: 177 T--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 221
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 222 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 59/319 (18%)
Query: 17 SEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-------EHISDA--A 67
S +G Y+ +E++G+G VV I T ++ A+K I D+ E + + A
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREA 69
Query: 68 XXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTRE 126
HP+I+++K + ++VF+LM+ +L + L+ +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKD-----TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 127 HYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA-RVAFNDTPTTIF 185
+ + LL + +H N+ HRDLKP+NIL + + +K+ DFG + ++ + ++
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV- 183
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
T Y APE+ + P +D+WS G I +L G P F + + L
Sbjct: 184 ----CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 242 LMTD---LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLA 298
++ G+P D S D L+ R L
Sbjct: 240 MIMSGNYQFGSPEWDDYSDTVKD------------------------------LVSRFLV 269
Query: 299 FDPKDRPTAEEALADPYFK 317
P+ R TAEEALA P+F+
Sbjct: 270 VQPQKRYTAEEALAHPFFQ 288
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D+ RY++ + IG G++GV D + E VA+K I + E I AA
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKI--AANVKREIINHRSLR 73
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LKICDFG ++ + + P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 65
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 66 ----ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 177 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 220
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 221 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 259
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 260 KKRMTIQDSLQHPWIK 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 221
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 222 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 65
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 66 ----ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 177 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 220
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 221 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 259
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 260 KKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 69 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRK 110
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LE 169
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 170 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 86 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 127
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 128 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LE 186
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 187 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
F++ DA+ I +V+G G +G VCS + + VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFF 131
HP+I+ ++ ++ K + +V E ME+ + D R+H QF
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 LYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
+ QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
F++ DA+ I +V+G G +G VCS + + VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFF 131
HP+I+ ++ ++ K + +V E ME+ + D R+H QF
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 LYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
+ QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 46/233 (19%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++ ++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
+ +KI DFGLA ++ F+ T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKTL----CGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK--ARRYLTSMRKKQPV 276
CI +L GKP F T L +T R++ ++ R++
Sbjct: 230 CILYTLLVGKPPFE-----------TSCLK----ETYIRIKKNEYSVPRHI--------- 265
Query: 277 QFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF-KGLSKVEREPSC 328
+P A L+ R+L DP RP+ E L D +F G + + SC
Sbjct: 266 ---------NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC 309
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 75/328 (22%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HD 58
M F + Y E +G G + VV + TG + A K I D
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 59 IFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVI 117
I +S HP+++ + + + D+ ++ EL+ +L +
Sbjct: 61 IEREVS----------ILKEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL 105
Query: 118 KANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA 173
+ LT E FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 174 -RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
++ F + IF T PE Y P D+WSIG I +L+G
Sbjct: 166 HKIDFGNEFKNIFGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 230 LFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSA 289
F G +L +S V + Y F N A
Sbjct: 216 PFLGDT------------KQETLANVSAVNYEFEDEY---------------FSNTSALA 248
Query: 290 LRLLERLLAFDPKDRPTAEEALADPYFK 317
+ RLL DPK R T +++L P+ K
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 69 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 110
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LE 169
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 170 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
F++ DA+ I +V+G G +G VCS + + VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFF 131
HP+I+ ++ ++ K + +V E ME+ + D R+H QF
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 LYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
+ QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIF------EHISDA 66
F++ DA+ I +V+G G +G VCS + + VAIK + + + + +A
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ K + +V E ME+ + D R+
Sbjct: 98 SIMGQFD-------HPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRK 139
Query: 127 H-YQFFLYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ +KY+ HRDL +NIL N+N K+ DFGL RV
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV-LE 198
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW +PE + K+T A D+WS G + EV++
Sbjct: 199 DDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 46/233 (19%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++ ++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
+ +KI DFGLA ++ F+ T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKXL----CGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK--ARRYLTSMRKKQPV 276
CI +L GKP F T L +T R++ ++ R++
Sbjct: 230 CILYTLLVGKPPFE-----------TSCLK----ETYIRIKKNEYSVPRHI--------- 265
Query: 277 QFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF-KGLSKVEREPSC 328
+P A L+ R+L DP RP+ E L D +F G + + SC
Sbjct: 266 ---------NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
F++ DA+ I +V+G G +G VCS + + VAIK + +
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 94
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH-YQFF 131
HP+I+ ++ ++ K + +V E ME+ + D R+H QF
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFT 143
Query: 132 LYQLL-------RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI 184
+ QL+ +KY+ HRDL +NIL N+N K+ DFGL+RV D P
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 202
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 203 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 243
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y + + ++ ++ TR F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTR----FYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ + D+W++GCI +++ G P F N
Sbjct: 207 TE--KSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
Y + + +G G++G V TG KVA+K ++ + H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P I+++ ++ P+ D ++V E + +L I + + + Q+L A+
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A+ KI DFGL+ + + F D + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRDSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
+ G ++ P +DIWS G I +L G F ++V
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------------HDIFEHISDAAXXX 70
Y E +G G + VV + TG + A K I DI +S
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLA-RVAFNDTPTTI 184
FL Q+L + Y+H+ + H DLKP+NI L + N ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I +L+G F G
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------ 221
Query: 242 LMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDP 301
+L +S V + Y F N A + RLL DP
Sbjct: 222 ------KQETLANVSAVNYEFEDEY---------------FSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 30/306 (9%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ E++G+G+Y V A+ G++ A+K I H S + + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH-SRSRVFREVETLYQCQGNKN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFE-LMESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+E+ +R Y+VFE L + I+ + + AL ++
Sbjct: 73 ILELIEFFEDDTR-----FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 143 HTANVYHRDLKPKNILANANCK---LKICDFGLAR-VAFNDTPTTIF---WTDYVATRWY 195
HT + HRDLKP+NIL + K +KICDF L + N++ T I T + Y
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 196 RAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
APE+ F + Y D+WS+G + +L+G P F G D D
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGA---DCGWD------R 238
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
+ RV +K + + + P + + + A L+ +LL D K R +A + L
Sbjct: 239 GEVCRVCQNKLFESIQEGKYEFP---DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 313 DPYFKG 318
P+ +G
Sbjct: 296 HPWVQG 301
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NIL +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR-AIADSGNSVXQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ EVLTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 57/315 (18%)
Query: 20 GDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF-------EHISDA--AXXX 70
G Y+ +E++G+G VV I T ++ A+K I D+ E + + A
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREATLK 59
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQ 129
HP+I+++K + ++VF+LM+ +L + L+ + +
Sbjct: 60 EVDILRKVSGHPNIIQLKD-----TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 114
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+ LL + +H N+ HRDLKP+NIL + + +K+ DFG + D + +
Sbjct: 115 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL--REV 170
Query: 190 VATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTD 245
T Y APE+ + P +D+WS G I +L G P F + + L ++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 246 ---LLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPK 302
G+P D S D L+ R L P+
Sbjct: 231 GNYQFGSPEWDDYSDTVKD------------------------------LVSRFLVVQPQ 260
Query: 303 DRPTAEEALADPYFK 317
R TAEEALA P+F+
Sbjct: 261 KRYTAEEALAHPFFQ 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 28 QEVIGKGSYGVVCSA-IDTHTGEK---VAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
Q+VIG G +G V + T +G+K VAIK + + H +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHN 107
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDLTREHYQFFLYQLLRA---- 138
I+ ++ ++ +K + ++ E ME+ L + ++ D E L +LR
Sbjct: 108 IIRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAG 159
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTD--YVATRWYR 196
+KY+ N HRDL +NIL N+N K+ DFGL+RV D P + T + RW
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-LEDDPEATYTTSGGKIPIRW-T 217
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE + K+T A D+WS G + EV+T
Sbjct: 218 APEAIS--YRKFTSASDVWSFGIVMWEVMT 245
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 69
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 185 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 67
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 183 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 68
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 184 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 66
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 181
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 182 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 86
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 87 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 198
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 199 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 247
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 248 --RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 288
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 289 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 315
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 207 TE--KSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
Y++ + IGKG++ V A TG++VA+K I + S HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +KI DFG + N+ + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDAFCGAPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
KY P +D+WS+G I +++G F G+N+
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ EVLTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ EVLTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 73 AIVAVYATGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ EVLTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 130/350 (37%), Gaps = 91/350 (26%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-----KIHDIFEHISDAAXXXXXXXXXXX 78
+Y ++ IG+GSYGVV AI+ T AIK KI I + D
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI--NPKDVERIKTEVRLMKK 84
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKAN---DDLT----------- 124
HP+I + + D + I +V EL H + K N DD T
Sbjct: 85 LHHPNIARLYEVY-----EDEQYICLVMELCHGG-HLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 125 -------------------REHYQF---------FLYQLLRALKYIHTANVYHRDLKPKN 156
RE F + Q+ AL Y+H + HRD+KP+N
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 157 IL--ANANCKLKICDFGLARVAFNDTPTTIF-WTDYVATRWYRAPELCGSFFSKYTPAID 213
L N + ++K+ DFGL++ + + T T ++ APE+ + Y P D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 214 IWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKK 273
WS G + +L G FPG N DTIS+V N K
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVN---------------DADTISQVLNKK----------- 292
Query: 274 QPVQFSQKFPNAD---PSALRLLERLLAFDPKDRPTAEEALADPYFKGLS 320
+ PN + P A LL LL + +R A AL P+ S
Sbjct: 293 ----LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 94
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 209
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 210 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 96
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 212 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 77
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 78 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 189
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 190 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 238
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 239 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 279
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 280 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 306
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 78
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 79 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 190
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 191 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 239
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 240 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 280
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 281 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 307
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E ++++ ++ + ++ +L AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 184
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 185 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 212
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 213 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 271 --KPSNCQ 276
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y +PE G + D++S+GC+ EVLTG+P F G +
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IGKGS+G V ID HT E VAIK I D+ E + P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHR 150
L ++ ++++ E + + L + L ++L+ L Y+H+ HR
Sbjct: 86 YLKSTK-----LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 151 DLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K N+L + +K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 141 DIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAYDF 195
Query: 211 AIDIWSIGCIFAEVLTGKP 229
DIWS+G E+ G+P
Sbjct: 196 KADIWSLGITAIELAKGEP 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 76
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 77 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 188
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 189 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 237
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 238 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 278
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 279 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 305
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDA-AXXXXXXXXXXXXXHP 82
++ V+GKGS+G V A TG+ A+K + D+ D HP
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+ ++ P R ++ V E + DL I+ + +F+ +++ AL +
Sbjct: 85 FLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + +RDLK N+L + K+ DFG+ + + TT + T Y APE+
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT---ATFCGTPDYIAPEIL 196
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y PA+D W++G + E+L G F +N
Sbjct: 197 QEML--YGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 73
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 189 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 122
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 123 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 234
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 235 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 283
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 284 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 324
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 325 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 351
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK K H I E + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 116
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 117 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 228
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 229 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 277
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 278 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 318
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 319 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 345
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH---DIFEHISDAAXXXXXXXXXX 77
D+ RY + IG G++GV D T E VA+K I I E++
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ------REIINHR 71
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLL 136
HP+IV K ++L P+ + ++ E +L++ I + + +FF QLL
Sbjct: 72 SLRHPNIVRFKEVILTPTH-----LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL 126
Query: 137 RALKYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATR 193
+ Y H+ + HRDLK +N L + + +LKICDFG ++ + + P + V T
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTP 181
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
Y APE+ +Y I D+WS G +L G
Sbjct: 182 AYIAPEVL--LRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 124/301 (41%), Gaps = 52/301 (17%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+++E IG GSY V I T + A+K I S HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-----SKRDPTEEIEILLRYGQHPNI 78
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ +K + D K +YVV ELM+ +L I + L+ + + ++Y+H
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 144 TANVYHRDLKPKNIL----ANANCKLKICDFGLARV--AFNDTPTTIFWTDYVATRWYRA 197
V HRDLKP NIL + ++ICDFG A+ A N T +T + A
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN-----FVA 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
PE+ Y A DIWS+G + +LTG P G + TP + ++
Sbjct: 189 PEVLER--QGYDAACDIWSLGVLLYTMLTGYTPFANGPD------------DTPE-EILA 233
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQKFPNA-DPSALRLLERLLAFDPKDRPTAEEALADPY 315
R+ + K S + N+ +A L+ ++L DP R TA L P+
Sbjct: 234 RIGSGK-------------FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280
Query: 316 F 316
Sbjct: 281 I 281
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 71
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 72 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 183
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 184 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 232
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 233 --RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 273
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 274 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 300
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 72
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 185 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 233
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 234 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 275 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 301
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 70
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 71 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 182
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 183 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 231
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 232 --RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 272
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 273 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 299
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D+ RY++ + IG G++GV D + E VA+K I + E I +
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLR-- 72
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ +
Sbjct: 73 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 140 KYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LKICDFG ++ + + P + V T Y
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 182
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 183 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 72
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 185 YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT 233
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 234 --RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 310 ALADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 275 FMNHPWIMQSTKVPQTP-----------LHTSRVLKED 301
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 138/337 (40%), Gaps = 68/337 (20%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 70
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 71 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +T + T+ T +Y
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYY 183
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI 255
APE+ G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 184 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT- 231
Query: 256 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEEA 310
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 232 -RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 273
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 274 MNHPWIMQSTKVPQTP-----------LHTSRVLKED 299
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 72
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLY--QLLRA 138
H +IV+ K + RR+ K ++ L L ++A+ + +H + Y Q+ +
Sbjct: 73 HDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKG 129
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 190 ESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHP 82
RY++ E++G G V A D VA+K + D+ S HP
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 89
Query: 83 DIVEIKHIM--------LPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLY 133
IV + LP Y+V E ++ L ++ +T + +
Sbjct: 90 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 140
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV-AT 192
+AL + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 199
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ EVLTG+P F G + V
Sbjct: 200 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI---HDIFEHISDAAXXXXXXXXXXXXXH 81
+ + E +G+GSYG V AI TG+ VAIK++ D+ E I + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS------- 83
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKA-NDDLTREHYQFFLYQLLRAL 139
P +V+ S D+++V E + + +I+ N LT + L L+ L
Sbjct: 84 PHVVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+Y+H HRD+K NIL N K+ DFG VA T + T ++ APE
Sbjct: 139 EYLHFMRKIHRDIKAGNILLNTEGHAKLADFG---VAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
+ Y DIWS+G E+ GKP
Sbjct: 196 VIQEI--GYNCVADIWSLGITAIEMAEGKP 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 53/305 (17%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA---AXXXXXXXXXXXXXHPDIV 85
EV+G G++ V TG+ A+K I S A + H +IV
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKK-----SPAFRDSSLENEIAVLKKIKHENIV 69
Query: 86 EIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHT 144
++ I + Y+V +L+ +L I T + + Q+L A+KY+H
Sbjct: 70 TLEDIYESTTHY-----YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 145 ANVYHRDLKPKNILA---NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+ HRDLKP+N+L N K+ I DFGL+++ N +T T Y APE+
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-----CGTPGYVAPEVL 179
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
Y+ A+D WSIG I +L G P F +
Sbjct: 180 AQ--KPYSKAVDCWSIGVITYILLCGYPPF----------------------------YE 209
Query: 262 KARRYLTSMRKKQPVQFSQKF-PNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLS 320
+ L K+ +F F + SA + LL DP +R T E+AL+ P+ G +
Sbjct: 210 ETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT 269
Query: 321 KVERE 325
+ R+
Sbjct: 270 ALHRD 274
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
Y + + +G G++G V TG KVA+K ++ + H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALK 140
P I+++ ++ P+ D ++V E + +L I + + + Q+L A+
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A+ KI DFGL+ + + F + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
+ G ++ P +DIWS G I +L G F ++V
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 96 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 205
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 206 GRM--HDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 233
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 234 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 292 --KPSNCQ 297
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPDIV 85
+GKG++G V C + +TGE VA+KK+ H EH+ D H +IV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ---HDNIV 77
Query: 86 EIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLY--QLLRALKYI 142
+ K + RR+ K ++ E + L + ++ + + +H + Y Q+ + ++Y+
Sbjct: 78 KYKGVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICKGMEYL 133
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
T HRDL +NIL ++KI DFGL +V D + ++ APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT 226
SK++ A D+WS G + E+ T
Sbjct: 194 E--SKFSVASDVWSFGVVLYELFT 215
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 74 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 184
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 237
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 238 LLAGLLKKDPKQ 249
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIK---KIHDIFEHISDAAXXXXXXXXXXXXXH 81
+K +++G+GS+ A + T + AIK K H I E + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P V++ + F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + ++I DFG A+V ++ +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ D+W++GCI +++ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 235 LLAGLLKKDPKQ 246
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 76 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 186
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 239
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 240 LLAGLLKKDPKQ 251
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 87 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 196
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 197 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 224
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 225 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 282
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 283 --KPSNCQ 288
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 123/312 (39%), Gaps = 59/312 (18%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y++ E +G G + +V TG++ A K I +S +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILRE 64
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L
Sbjct: 65 IRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 138 ALKYIHTANVYHRDLKPKNIL---ANA-NCKLKICDFGLA-RVAFNDTPTTIFWTDYVAT 192
+ Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + IF T
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT----- 174
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
PE Y P D+WSIG I +L+G F G+
Sbjct: 175 -----PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------------KQ 217
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
+L IS V D Y F N A + RLL DPK R T +
Sbjct: 218 ETLTNISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMTIAQ 262
Query: 310 ALADPYFKGLSK 321
+L + K + +
Sbjct: 263 SLEHSWIKAIRR 274
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 235 LLAGLLKKDPKQ 246
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 22/256 (8%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKV--AIKKIHD--IFEHISDAAXXXXXXXXXXX 78
S + +VIGKGS+G V A H E+V A+K + I + +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLA--RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP +V + S + +Y V + + +L ++ +F+ ++
Sbjct: 96 VKHPFLVGLHF-----SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 150
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
AL Y+H+ N+ +RDLKP+NIL ++ + + DFGL + TT + + T Y A
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT---STFCGTPEYLA 207
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
PE+ Y +D W +G + E+L G P F +N D ++L P L
Sbjct: 208 PEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD---NILNKP-LQLKPN 261
Query: 258 VRNDKARRYLTSMRKK 273
+ N AR L + +K
Sbjct: 262 ITNS-ARHLLEGLLQK 276
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 235 LLAGLLKKDPKQ 246
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 235 LLAGLLKKDPKQ 246
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + A HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
K+ R F Y +L + T E +F+ +++ AL+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + + +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRVRNDKARR 265
Y A+D W +G + E++ G+ F ++ + +L LM ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLTSMRKKQPVQ 277
L + KK P Q
Sbjct: 235 LLAGLLKKDPKQ 246
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 100
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 157
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 218 ESLTE--SKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 72
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 127
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 188 APESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D+ RY++ + IG G++GV D + E VA+K I + E I +
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLR-- 73
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LKIC FG ++ + + P D V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-----KDTVGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 76
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 131
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 192 APESLTE--SKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 73
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 130
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 191 ESLTE--SKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 74
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 129
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 190 APESLTE--SKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 75
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 130
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 191 APESLTE--SKFSVASDVWSFGVVLYELFT 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 180 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 207
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 208 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 266 --KPSNCQ 271
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 69
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 124
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 68
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 123
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 184 APESLTE--SKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 69
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLY--QLL 136
H +IV+ K + RR+ K I Y+ + + L + + D H + Y Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 124
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++KI DFGL +V D + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 184
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 185 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 212
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 213 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 271 --KPSNCQ 276
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 73 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 182
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 183 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 210
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 211 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 269 --KPSNCQ 274
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 87
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 144
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 205 ESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 67
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 124
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 185 ESLTE--SKFSVASDVWSFGVVLYELFT 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++ +E +G G++ V A + TG+ A+K I +++ H +I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK-HENI 82
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V ++ I P+ +Y+V +L+ +L I T + + Q+L A+ Y+H
Sbjct: 83 VALEDIYESPNH-----LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 144 TANVYHRDLKPKNIL---ANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPE 199
+ HRDLKP+N+L + K+ I DFGL+++ D +T T Y APE
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA-----CGTPGYVAPE 192
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLMTDLLGTPSLDTIS 256
+ Y+ A+D WSIG I +L G P F +N + Q+ +P D IS
Sbjct: 193 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDIS 250
Query: 257 RVRNDKARRYLTSMRKKQP 275
D A+ ++ ++ +K P
Sbjct: 251 ----DSAKDFIRNLMEKDP 265
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 87
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 144
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++KI DFGL +V D + ++ AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 205 ESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 69
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 126
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT---------PTTIFWTDY 189
++Y+ T HRDL +NIL ++KI DFGL +V D + IFW
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-- 184
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 -------APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V ID T + VAIK I D+ E + P + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
L ++ ++++ E + + L L ++L+ L Y+H+
Sbjct: 87 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 141
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAY 196
Query: 209 TPAIDIWSIGCIFAEVLTGKP 229
DIWS+G E+ G+P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 22/224 (9%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA---AXXXXXXXX 75
Y + ++I++ IG+G + V A G VA+KK+ IF+ + DA A
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ-IFD-LMDAKARADCIKEIDL 85
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTR-----EHYQ 129
HP++++ S + ++ +V EL ++ DL ++IK R ++
Sbjct: 86 LKQLNHPNVIKYY-----ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY 189
+F+ QL AL+++H+ V HRD+KP N+ A +K+ D GL R F + TT +
Sbjct: 141 YFV-QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHS-L 196
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
V T +Y +PE + Y DIWS+GC+ E+ + F G
Sbjct: 197 VGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 129
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 184
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 185 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 212
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 213 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F+ +ASR I+++IG G G VC G++ VAIK + + + +S+A
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ + +V E ME+ + D R
Sbjct: 102 SIMGQFD-------HPNIIRLEGVVTRG-----RLAMIVTEYMENG------SLDTFLRT 143
Query: 127 H-YQFFLYQLLRALK-------YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ L+ Y+ HRDL +N+L ++N K+ DFGL+RV
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LE 202
Query: 179 DTPTTIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D P + T + RW APE F ++ A D+WS G + EVL
Sbjct: 203 DDPDAAYTTTGGKIPIRW-TAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIE 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 180 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 207
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 208 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 266 --KPSNCQ 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIE 184
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 185 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 212
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 213 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS- 269
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 270 -SKPSNCQ 276
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 49/296 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 71 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT-DYVATRWYRAPELC 201
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T DY+ PE+
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYL------PPEMI 179
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
+ +D+WS+G + E L GKP F
Sbjct: 180 EG--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------ 207
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYF 316
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 208 EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V ID T + VAIK I D+ E + P + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
L ++ ++++ E + + L L ++L+ L Y+H+
Sbjct: 92 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 146
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAY 201
Query: 209 TPAIDIWSIGCIFAEVLTGKP 229
DIWS+G E+ G+P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 124
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 179
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 180 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 207
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 208 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEXIE 184
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 185 G--RXHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 212
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 213 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 271 --KPSNCQ 276
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 71 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIE 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 181 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 208
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 209 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 267 --KPSNCQ 272
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI--SDAAXXXXXXXXXXXX 79
A Y + +VIG+G++G V + +KV K+ FE I SD+A
Sbjct: 74 AEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRAL 139
P +V+ L + +D K +Y+V E M + +N D+ + +F+ +++ AL
Sbjct: 133 NSPWVVQ-----LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLAL 187
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
IH+ + HRD+KP N+L + + LK+ DFG D + V T Y +PE
Sbjct: 188 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPE 245
Query: 200 LCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKNVV 237
+ S Y D WS+G E+L G F ++V
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V ID T + VAIK I D+ E + P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
L ++ ++++ E + + L L ++L+ L Y+H+
Sbjct: 72 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAY 181
Query: 209 TPAIDIWSIGCIFAEVLTGKP 229
DIWS+G E+ G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V ID T + VAIK I D+ E + P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
L ++ ++++ E + + L L ++L+ L Y+H+
Sbjct: 72 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAY 181
Query: 209 TPAIDIWSIGCIFAEVLTGKP 229
DIWS+G E+ G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 123/319 (38%), Gaps = 71/319 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R ELCG
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRTELCG 168
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 169 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 207 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 311 LADPYFKGLSKVEREPSCQ 329
L P+ S + +CQ
Sbjct: 255 LEHPWITANSS--KPSNCQ 271
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D+ RY++ + IG G++GV D + E VA+K I + E I +
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLR-- 73
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LKIC FG ++ + + P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 51/301 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + + +A+K + E HP+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTR---EHYQFFLYQLLRALK 140
I+ + +R +Y++ E + L V + L+R + ++ +L AL
Sbjct: 74 ILRLYGYFHDATR-----VYLILEY--APLGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
Y H+ V HRD+KP+N+L +N +LKI DFG + A + TT+ T Y PE+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEM 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
+ +D+WS+G + E L G P F
Sbjct: 182 IEG--RMHDEKVDLWSLGVLCYEFLVGMPPF----------------------------- 210
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGL 319
+A Y + R+ V+F+ FP+ R L+ RLL + R T E L P+ K
Sbjct: 211 -EAHTYQETYRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
Query: 320 S 320
S
Sbjct: 268 S 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIE 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 180 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 207
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 208 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 266 --KPSNCQ 271
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ IG GS+G V TG A+K I D I++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E M D+ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ IG GS+G V TG A+K I D I++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E M D+ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV + TG A K + + H SD HP +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYI 142
V + D ++ +++E M +V ++ ++ + ++ Q+ + L ++
Sbjct: 111 VNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 143 HTANVYHRDLKPKNIL--ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
H N H DLKP+NI+ + +LK+ DFGL A D ++ T T + APE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAPEV 221
Query: 201 C-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
G YT D+WS+G + +L+G F G+N
Sbjct: 222 AEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 55/336 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++++ +G+G+ +V T + A+K + + D HP+I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK----VLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+++K I P+ +I +V EL+ +L I + + Q+L A+ Y+H
Sbjct: 111 IKLKEIFETPT-----EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 144 TANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + LKI DFGL+++ + + T Y APE+
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPGYCAPEI 221
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
Y P +D+WS+G I +L G +P +
Sbjct: 222 LRG--CAYGPEVDMWSVGIITYILLCGFEPFY---------------------------- 251
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALR---LLERLLAFDPKDRPTAEEALADPYF 316
+++ +++ R+ ++ P D +L L+ +L+ DPK R T +AL P+
Sbjct: 252 DERGDQFM--FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
Query: 317 KGLSKVEREPSCQPISKMEFEFERRRVTKEDIRELI 352
G K K EF RR K ++ ++
Sbjct: 310 TG--KAANFVHMDTAQKKLQEFNARRKLKAAVKAVV 343
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 66 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 178
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 179 RREFHAEP-VDVWSCGIVLTAMLAGE 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 72 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI +FG + A + TT+ T Y PE+
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 181
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 182 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 209
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 210 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 268 --KPSNCQ 273
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++++E +G G +G V I TGE+VAIK+ + HP++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 74
Query: 85 VEIKHIMLPPSRRDFKDI-YVVFELMES-DLHQVIKANDD---LTREHYQFFLYQLLRAL 139
V + + + D+ + E E DL + + ++ L + L + AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 140 KYIHTANVYHRDLKPKNILANANCKL---KICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + KI D G A+ + T++V T Y
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFP 232
APEL KYT +D WS G + E +TG +P P
Sbjct: 191 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 26 KIQEVIGKGSYGVV--C--SAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXX 80
K + +GKG++G V C + +TGE VA+KK+ H EH+ D
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--- 70
Query: 81 HPDIVEIKHIMLPPSRRDFKDI--YVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
H +IV+ K + RR+ K I Y+ + + L + + D + Y Q+ +
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 127
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT---------PTTIFWTDY 189
++Y+ T HR+L +NIL ++KI DFGL +V D + IFW
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-- 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 186 -------APESLTE--SKFSVASDVWSFGVVLYELFT 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++++E +G G +G V I TGE+VAIK+ + HP++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 75
Query: 85 VEIKHIMLPPSRRDFKDI-YVVFELMES-DLHQVIKANDD---LTREHYQFFLYQLLRAL 139
V + + + D+ + E E DL + + ++ L + L + AL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 140 KYIHTANVYHRDLKPKNILANANCKL---KICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + KI D G A+ + T++V T Y
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFP 232
APEL KYT +D WS G + E +TG +P P
Sbjct: 192 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 201
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D+ RY++ + IG G++GV D E VA+K I + E I +
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVKREIINHRSLR-- 73
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYIHTANVYHRDLKPKNILANAN--CKLKICDFGLARVA-FNDTPTTIFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LKI DFG ++ + + P + V T Y
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 179
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 238
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 239 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 132/334 (39%), Gaps = 58/334 (17%)
Query: 8 KNSPEMEFFSEYGDASR---------YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD 58
+N+PE E S+ + ++I +GKG +G V A + + +A+K +
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 59 I-FEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQV 116
E HP+I+ + D +Y++ E +++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRE 124
Query: 117 IKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA 176
++ + ++ +L AL Y H+ V HRD+KP+N+L + +LKI DFG + A
Sbjct: 125 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 177 FNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
P++ D T Y PE+ + +D+WS+G + E L GKP F
Sbjct: 185 ----PSSRR-DDLCGTLDYLPPEMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF----- 232
Query: 237 VHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLER 295
+A Y + ++ V+F+ FP+ R L+ R
Sbjct: 233 -------------------------EANTYQETYKRISRVEFT--FPDFVTEGARDLISR 265
Query: 296 LLAFDPKDRPTAEEALADPYFKGLSKVEREPSCQ 329
LL +P RP E L P+ S + +CQ
Sbjct: 266 LLKHNPSQRPMLREVLEHPWITANSS--KPSNCQ 297
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++QEVIG G+ VV +A EKVAIK+I ++ + + HP+I
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDD-----LTREHYQFFLYQL 135
V + ++++V +L+ D+ + I A + L L ++
Sbjct: 76 VSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI----FWTDYVA 191
L L+Y+H HRD+K NIL + ++I DFG++ AF T I +V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVG 188
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP---LFPGKNVVHQLDLMTDLLG 248
T + APE+ Y DIWS G E+ TG +P V+ L L D
Sbjct: 189 TPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQND--- 243
Query: 249 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAE 308
PSL+T + + + ++Y S RK ++ L DP+ RPTA
Sbjct: 244 PPSLETGVQDK-EMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 283
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 284 ELLRHKFFQ 292
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 46/297 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV + TG A K + + H SD HP +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYI 142
V + D ++ +++E M +V ++ ++ + ++ Q+ + L ++
Sbjct: 217 VNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 143 HTANVYHRDLKPKNIL--ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
H N H DLKP+NI+ + +LK+ DFGL A D ++ T T + APE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAPEV 327
Query: 201 C-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
G YT D+WS+G + +L+G F G+N
Sbjct: 328 AEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN------------------------ 360
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
+D+ R + S F + +LL DP R T +AL P+
Sbjct: 361 DDETLRNVKSCDWNMD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + +A+K + E HP+
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + TT+ T Y PE+
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 177
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 178 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 205
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 206 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 51/309 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E ++++ ++ + ++ +L AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWT-DYVATRWYRAPELC 201
H+ V HRD+KP+N+L + +LKI DFG + A + + T DY+ PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLP------PEMI 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
+ +D+WS+G + E L GKP F
Sbjct: 184 EG--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------ 211
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLS 320
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 212 EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
Query: 321 KVEREPSCQ 329
+ +CQ
Sbjct: 270 S--KPSNCQ 276
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI +FG + A + TT+ T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 16 FSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEK---VAIKKIHDIF------EHISDA 66
F+ +ASR I+++IG G G VC G++ VAIK + + + +S+A
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 67 AXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTRE 126
+ HP+I+ ++ ++ + +V E ME+ + D R
Sbjct: 102 SIMGQFD-------HPNIIRLEGVVTRG-----RLAMIVTEYMEN------GSLDTFLRT 143
Query: 127 H-YQFFLYQLLRALK-------YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
H QF + QL+ L+ Y+ HRDL +N+L ++N K+ DFGL+RV +
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 179 DTPTTIFWT-DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
D T + RW APE F ++ A D+WS G + EVL
Sbjct: 204 DPDAAXTTTGGKIPIRW-TAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 192
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 193 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 RREFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 192
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 193 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 201
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 71 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + T+ T Y PE+
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL-----CGTLDYLPPEMIE 180
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+WS+G + E L GKP F +
Sbjct: 181 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 208
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
A Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+ S
Sbjct: 209 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
Query: 322 VEREPSCQ 329
+ +CQ
Sbjct: 267 --KPSNCQ 272
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y++QEVIG G+ VV +A EKVAIK+I ++ + + HP+I
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDD-----LTREHYQFFLYQL 135
V + ++++V +L+ D+ + I A + L L ++
Sbjct: 71 VSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI----FWTDYVA 191
L L+Y+H HRD+K NIL + ++I DFG++ AF T I +V
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVG 183
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP---LFPGKNVVHQLDLMTDLLG 248
T + APE+ Y DIWS G E+ TG +P V+ L L D
Sbjct: 184 TPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQND--- 238
Query: 249 TPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAE 308
PSL+T + + + ++Y S RK ++ L DP+ RPTA
Sbjct: 239 PPSLETGVQDK-EMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 278
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 279 ELLRHKFFQ 287
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 45/293 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL-----CGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPY 315
Y + ++ V+F+ FP+ R L+ RLL +P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 47/306 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI--SDAAXXXXXXXXXXXXXHP 82
++I +VIG+G++G V + + +KV KI + +E + ++ A
Sbjct: 76 FEILKVIGRGAFGEV-AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFEL-MESDLHQVI-KANDDLTREHYQFFLYQLLRALK 140
I + + +D ++Y+V + + DL ++ K D L E +F+L +++ A+
Sbjct: 135 WITTLHYAF-----QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAID 189
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H + HRD+KP NIL + N +++ DFG D T+ + V T Y +PE+
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED--GTVQSSVAVGTPDYISPEI 247
Query: 201 CGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
+ +Y P D WS+G E+L G+ F +++V +T +
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---------------ETYGK 292
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD---- 313
+ N K R QF + + +A L+ RL+ ++ + + D
Sbjct: 293 IMNHKER-----------FQFPTQVTDVSENAKDLIRRLIC--SREHRLGQNGIEDFKKH 339
Query: 314 PYFKGL 319
P+F G+
Sbjct: 340 PFFSGI 345
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 120/302 (39%), Gaps = 54/302 (17%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y+++E IG GSY V I T + A+K I S HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK-----SKRDPTEEIEILLRYGQHPNI 78
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ +K + D K +YVV EL + +L I + L+ + + ++Y+H
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 144 TANVYHRDLKPKNIL----ANANCKLKICDFGLA---RVAFNDTPTTIFWTDYVATRWYR 196
V HRDLKP NIL + ++ICDFG A R T + ++V
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV------ 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLMTDLLGTPSLDTI 255
APE+ Y A DIWS+G + LTG P G + TP + +
Sbjct: 188 APEVLER--QGYDAACDIWSLGVLLYTXLTGYTPFANGPD------------DTPE-EIL 232
Query: 256 SRVRNDKARRYLTSMRKKQPVQFSQKFPNA-DPSALRLLERLLAFDPKDRPTAEEALADP 314
+R+ + K S + N+ +A L+ + L DP R TA L P
Sbjct: 233 ARIGSGK-------------FSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHP 279
Query: 315 YF 316
+
Sbjct: 280 WI 281
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 120/310 (38%), Gaps = 55/310 (17%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX---- 80
Y++ E +G G + +V TG++ A K I S
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L +
Sbjct: 88 HPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 140 KYIHTANVYHRDLKPKNIL---ANA-NCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRW 194
Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + IF T
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT------- 195
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
PE Y P D+WSIG I +L+G F G+ +
Sbjct: 196 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------------KQET 240
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEAL 311
L IS V D Y F N A + RLL DPK R ++L
Sbjct: 241 LTNISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
Query: 312 ADPYFKGLSK 321
+ K + +
Sbjct: 286 EHSWIKAIRR 295
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 25 YKIQE-VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
Y++QE V+G+G++ V + I+ T ++ A+K I HI + H +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEMLYQCQGHRN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME--SDLHQVIKANDDLTREHYQ-----FFLYQLL 136
++E+ R Y+VFE M S L + K R H+ + +
Sbjct: 73 VLELIEFFEEEDR-----FYLVFEKMRGGSILSHIHK------RRHFNELEASVVVQDVA 121
Query: 137 RALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLAR-VAFNDTPTTIFWTDYV-- 190
AL ++H + HRDLKP+NIL N +KICDFGL + N + I + +
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP 181
Query: 191 -ATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
+ Y APE+ +F S Y D+WS+G I +L+G P F G+
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSD 233
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRP 305
G + +N L ++ +F K + + +A L+ +LL D K R
Sbjct: 234 CGWDRGEACPACQN-----MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL 288
Query: 306 TAEEALADPYFKGLS 320
+A + L P+ +G +
Sbjct: 289 SAAQVLQHPWVQGCA 303
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 192
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 193 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 59/309 (19%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDA------AXXXXXXXXXXX 78
Y++ E +G G + +V TG++ A K I +S +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILRE 71
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLR 137
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L
Sbjct: 72 IRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 138 ALKYIHTANVYHRDLKPKNIL---ANA-NCKLKICDFGLA-RVAFNDTPTTIFWTDYVAT 192
+ Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + IF T
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT----- 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGT 249
PE Y P D+WSIG I +L+G F G+
Sbjct: 182 -----PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------------KQ 224
Query: 250 PSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEE 309
+L IS V D Y F N A + RLL DPK R +
Sbjct: 225 ETLTNISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMXIAQ 269
Query: 310 ALADPYFKG 318
+L + K
Sbjct: 270 SLEHSWIKA 278
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
+ ++ +++GKG++G V + TG A+K + ++ + A H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P + +K+ R F Y +L + + + +F+ +++ AL Y
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 142 IHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +KI DFGL + D T + T Y APE+
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEV 323
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRV 258
+ Y A+D W +G + E++ G+ F ++ + +L LM ++ R
Sbjct: 324 LED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRT 374
Query: 259 RNDKARRYLTSMRKKQPVQ 277
+A+ L+ + KK P Q
Sbjct: 375 LGPEAKSLLSGLLKKDPKQ 393
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 192
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 193 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
+ ++ +++GKG++G V + TG A+K + ++ + A H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P + +K+ R F Y +L + + + +F+ +++ AL Y
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 142 IHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +KI DFGL + D T + T Y APE+
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 182
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRV 258
+ Y A+D W +G + E++ G+ F ++ + +L LM ++ R
Sbjct: 183 LED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRT 233
Query: 259 RNDKARRYLTSMRKKQPVQ 277
+A+ L+ + KK P Q
Sbjct: 234 LGPEAKSLLSGLLKKDPKQ 252
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIF---EHISDAAXXXXXXXXXXXXXHPD 83
Q +G+GS+G V D TG + A+KK+ ++F E ++ A P
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PR 111
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + + R+ + + EL+E L Q+IK L + ++L Q L L+Y+
Sbjct: 112 IVPLYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 166
Query: 143 HTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDT-PTTIFWTDYV-ATRWYRAPE 199
HT + H D+K N+L +++ + +CDFG A D ++ DY+ T + APE
Sbjct: 167 HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 200 LCGSFFSKYTPA-IDIWSIGCIFAEVLTG 227
+ K A +DIWS C+ +L G
Sbjct: 227 V---VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
+ ++ +++GKG++G V + TG A+K + ++ + A H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P + +K+ R F Y +L + + + +F+ +++ AL Y
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 142 IHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +KI DFGL + D T + T Y APE+
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEV 320
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRV 258
+ Y A+D W +G + E++ G+ F ++ + +L LM ++ R
Sbjct: 321 LED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRT 371
Query: 259 RNDKARRYLTSMRKKQPVQ 277
+A+ L+ + KK P Q
Sbjct: 372 LGPEAKSLLSGLLKKDPKQ 390
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 71/319 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 73 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRAALCG 171
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 172 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 311 LADPYFKGLSKVEREPSCQ 329
L P+ S + +CQ
Sbjct: 258 LEHPWITANSS--KPSNCQ 274
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 30 VIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
V+GKGS+G V A T E AIK + D+ D P +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 89 HIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANV 147
H R +Y V E + DL I+ F+ ++ L ++H +
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
+RDLK N++ ++ +KI DFG+ + D TT ++ T Y APE+ +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT---REFCGTPDYIAPEIIA--YQP 196
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
Y ++D W+ G + E+L G+P F G++
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 201
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 71/319 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 72 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCG 170
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 171 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 208
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 209 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 256
Query: 311 LADPYFKGLSKVEREPSCQ 329
L P+ S + +CQ
Sbjct: 257 LEHPWITANSS--KPSNCQ 273
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++I +VIG+G++G V + + E++ KI + +E + A + D
Sbjct: 92 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLK-RAETACFREERDVLVNGDC 149
Query: 85 VEIKHIMLPPSRRDFKDIYVVFEL-MESDLHQVI-KANDDLTREHYQFFLYQLLRALKYI 142
I L + +D +Y+V + + DL ++ K D L + +F++ +++ A+ I
Sbjct: 150 QWIT--ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H + HRD+KP N+L + N +++ DFG + + ND T+ + V T Y +PE+
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMND-DGTVQSSVAVGTPDYISPEILQ 265
Query: 203 SF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
+ KY P D WS+G E+L G+ F +++V +T ++
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------------ETYGKIM 310
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD----PY 315
N + R QF + A L++RL+ ++R + + D +
Sbjct: 311 NHEER-----------FQFPSHVTDVSEEAKDLIQRLIC--SRERRLGQNGIEDFKKHAF 357
Query: 316 FKGLS 320
F+GL+
Sbjct: 358 FEGLN 362
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIF---EHISDAAXXXXXXXXXXXXXHPD 83
Q +G+GS+G V D TG + A+KK+ ++F E ++ A P
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PR 127
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + + R+ + + EL+E L Q+IK L + ++L Q L L+Y+
Sbjct: 128 IVPLYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 182
Query: 143 HTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDT-PTTIFWTDYV-ATRWYRAPE 199
HT + H D+K N+L +++ + +CDFG A D ++ DY+ T + APE
Sbjct: 183 HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 200 LCGSFFSKYTPA-IDIWSIGCIFAEVLTG 227
+ K A +DIWS C+ +L G
Sbjct: 243 V---VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
+ ++ +++GKG++G V + TG A+K + ++ + A H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P + +K+ R F Y +L + + + +F+ +++ AL Y
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 142 IHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +KI DFGL + D T + T Y APE+
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRV 258
+ Y A+D W +G + E++ G+ F ++ + +L LM ++ R
Sbjct: 182 LED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRT 232
Query: 259 RNDKARRYLTSMRKKQPVQ 277
+A+ L+ + KK P Q
Sbjct: 233 LGPEAKSLLSGLLKKDPKQ 251
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXXXXXXXXXXXXXH 81
+ ++ +++GKG++G V + TG A+K + ++ + A H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
P + +K+ R F Y +L + + + +F+ +++ AL Y
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 142 IHT-ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +KI DFGL + D T + T Y APE+
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 180
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN--VVHQLDLMTDLLGTPSLDTISRV 258
+ Y A+D W +G + E++ G+ F ++ + +L LM ++ R
Sbjct: 181 LED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRT 231
Query: 259 RNDKARRYLTSMRKKQPVQ 277
+A+ L+ + KK P Q
Sbjct: 232 LGPEAKSLLSGLLKKDPKQ 250
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 120/301 (39%), Gaps = 51/301 (16%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + + +A+K + E HP+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTR---EHYQFFLYQLLRALK 140
I+ + +R +Y++ E + L V + L+R + ++ +L AL
Sbjct: 74 ILRLYGYFHDATR-----VYLILEY--APLGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 141 YIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
Y H+ V HRD+KP+N+L +N +LKI DFG + A + T+ T Y PE+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL-----CGTLDYLPPEM 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
+ +D+WS+G + E L G P F
Sbjct: 182 IEG--RMHDEKVDLWSLGVLCYEFLVGMPPF----------------------------- 210
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGL 319
+A Y + R+ V+F+ FP+ R L+ RLL + R T E L P+ K
Sbjct: 211 -EAHTYQETYRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
Query: 320 S 320
S
Sbjct: 268 S 268
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 118/305 (38%), Gaps = 69/305 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 73 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R +LCG
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRDDLCG 171
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 172 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 209
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 210 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 311 LADPY 315
L P+
Sbjct: 258 LEHPW 262
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 7 KKNSPEMEFFSEYGD-----------ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKK 55
+KN F S Y D A Y++ +VIG+G++G V + + KV K
Sbjct: 42 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMK 100
Query: 56 IHDIFEHI--SDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDL 113
+ FE I SD+A P +V++ + +D + +Y+V E M
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGD 155
Query: 114 HQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG-- 171
+ +N D+ + +F+ +++ AL IH+ HRD+KP N+L + + LK+ DFG
Sbjct: 156 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215
Query: 172 --LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTG 227
+ + T + DY+ +PE+ S Y D WS+G E+L G
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYI------SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Query: 228 KPLFPGKNVV 237
F ++V
Sbjct: 270 DTPFYADSLV 279
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 7 KKNSPEMEFFSEYGD-----------ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKK 55
+KN F S Y D A Y++ +VIG+G++G V + + KV K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMK 105
Query: 56 IHDIFEHI--SDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDL 113
+ FE I SD+A P +V++ + +D + +Y+V E M
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGD 160
Query: 114 HQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG-- 171
+ +N D+ + +F+ +++ AL IH+ HRD+KP N+L + + LK+ DFG
Sbjct: 161 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 220
Query: 172 --LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTG 227
+ + T + DY+ +PE+ S Y D WS+G E+L G
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYI------SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 228 KPLFPGKNVV 237
F ++V
Sbjct: 275 DTPFYADSLV 284
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIF---EHISDAAXXXXXXXXXXXXXHPD 83
Q +G+GS+G V D TG + A+KK+ ++F E ++ A P
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PR 125
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
IV + + R+ + + EL+E L Q+IK L + ++L Q L L+Y+
Sbjct: 126 IVPLYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 180
Query: 143 HTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDT-PTTIFWTDYV-ATRWYRAPE 199
HT + H D+K N+L +++ + +CDFG A D ++ DY+ T + APE
Sbjct: 181 HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 200 LCGSFFSKYTPA-IDIWSIGCIFAEVLTG 227
+ K A +DIWS C+ +L G
Sbjct: 241 V---VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISD--AAXXXXXXXXXXXXXHP 82
+++ +++GKGS+G V A T + AIK + + D HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+ H+ ++ +++ V E + DL I++ F+ +++ L++
Sbjct: 80 FLT---HMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+H+ + +RDLK NIL + + +KI DFG+ + T ++ T Y APE+
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAPEIL 191
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
KY ++D WS G + E+L G+ F G++
Sbjct: 192 LG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 18 EYGDASRYKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXX 76
+Y Y++ ++V+G G G V TG+K A+K ++D + +
Sbjct: 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGP 82
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLY 133
D+ E H + + ++ E ME +L I+ D T +
Sbjct: 83 HIVCILDVYENMH-------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYV 190
+ A++++H+ N+ HRD+KP+N+L + K LK+ DFG A+ + T +T Y
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY- 194
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 195 ----YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ +A+K+I P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 91 MLPPSRRDFKDIYVVFELMESDL----HQVIKANDDLTREHYQFFLYQLLRALKYIHTA- 145
+ D+++ ELM++ L QVI + + +++AL+++H+
Sbjct: 119 LFREG-----DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 146 NVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K+CDFG++ + TI + Y APE
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI----DAGCKPYMAPERINPEL 229
Query: 206 SK--YTPAIDIWSIGCIFAEV 224
++ Y+ DIWS+G E+
Sbjct: 230 NQKGYSVKSDIWSLGITMIEL 250
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 43/305 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++I +VIG+G++G V + + E++ KI + +E + A + D
Sbjct: 76 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLK-RAETACFREERDVLVNGDC 133
Query: 85 VEIKHIMLPPSRRDFKDIYVVFEL-MESDLHQVI-KANDDLTREHYQFFLYQLLRALKYI 142
I L + +D +Y+V + + DL ++ K D L + +F++ +++ A+ I
Sbjct: 134 QWIT--ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H + HRD+KP N+L + N +++ DFG + + ND T+ + V T Y +PE+
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMND-DGTVQSSVAVGTPDYISPEILQ 249
Query: 203 SF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
+ KY P D WS+G E+L G+ F +++V +T ++
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------------ETYGKIM 294
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD----PY 315
N + R QF + A L++RL+ ++R + + D +
Sbjct: 295 NHEER-----------FQFPSHVTDVSEEAKDLIQRLIC--SRERRLGQNGIEDFKKHAF 341
Query: 316 FKGLS 320
F+GL+
Sbjct: 342 FEGLN 346
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 7 KKNSPEMEFFSEYGD-----------ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKK 55
+KN F S Y D A Y++ +VIG+G++G V + + KV K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMK 105
Query: 56 IHDIFEHI--SDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDL 113
+ FE I SD+A P +V++ + +D + +Y+V E M
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGD 160
Query: 114 HQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG-- 171
+ +N D+ + +F+ +++ AL IH+ HRD+KP N+L + + LK+ DFG
Sbjct: 161 LVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 220
Query: 172 --LARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTG 227
+ + T + DY+ +PE+ S Y D WS+G E+L G
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYI------SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 228 KPLFPGKNVV 237
F ++V
Sbjct: 275 DTPFYADSLV 284
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 18 EYGDASRYKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXX 76
+Y Y++ ++V+G G G V TG+K A+K ++D + +
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGP 63
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLY 133
D+ E H + + ++ E ME +L I+ D T +
Sbjct: 64 HIVCILDVYENMH-------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 116
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCK---LKICDFGLARVAFNDTPTTIFWTDYV 190
+ A++++H+ N+ HRD+KP+N+L + K LK+ DFG A+ + T +T Y
Sbjct: 117 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY- 175
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 176 ----YVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 67/304 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCGT 169
Query: 204 FFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
Y P +D+WS+G + E L GKP F
Sbjct: 170 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 206
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEAL 311
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E L
Sbjct: 207 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
Query: 312 ADPY 315
P+
Sbjct: 256 EHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 67/304 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCGT 172
Query: 204 FFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSL 252
Y P +D+WS+G + E L GKP F
Sbjct: 173 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 209
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEAL 311
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E L
Sbjct: 210 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
Query: 312 ADPY 315
P+
Sbjct: 259 EHPW 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 69/305 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + D +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRAALCG 168
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 169 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 207 ----------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 311 LADPY 315
L P+
Sbjct: 255 LEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 119/305 (39%), Gaps = 69/305 (22%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDI-FEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + +R +Y++ E +++ ++ + ++ +L AL Y
Sbjct: 70 ILRLYGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRAALCG 168
Query: 203 SFFSKYTP-----------AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPS 251
+ Y P +D+WS+G + E L GKP F
Sbjct: 169 TL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-------------------- 206
Query: 252 LDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEA 310
+A Y + ++ V+F+ FP+ R L+ RLL +P RP E
Sbjct: 207 ----------EANTYQDTYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREV 254
Query: 311 LADPY 315
L P+
Sbjct: 255 LEHPW 259
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 79 XXHPDIVEIKHIMLPPSR------------------RDFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V ++ DL++
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK----- 144
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 203
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 204 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 258
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 130/317 (41%), Gaps = 59/317 (18%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDC------PKARREVELHWRASQCPH 116
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + A
Sbjct: 117 IVRIVDVYENLYAGR---KCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLAR-VAFNDTPTTIFWTDYVATRW 194
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ +++ TT +T Y
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY----- 228
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
Y APE+ G KY + D WS+G I +L G P F H L + +P T
Sbjct: 229 YVAPEVLGP--EKYDKSCDXWSLGVIXYILLCGYPPFYSN---HGLAI------SPGXKT 277
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSAL-----RLLERLLAFDPKDRPTAEE 309
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 278 --RIRXGQY-----------------EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITE 318
Query: 310 ALADPYFKGLSKVEREP 326
P+ +KV + P
Sbjct: 319 FXNHPWIXQSTKVPQTP 335
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 54/303 (17%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV ++ TG K I+ + D HP
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHP-- 108
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKAND-DLTREHYQFFLYQLLRALKYI 142
K I L + D ++ ++ E + +L I A D ++ ++ Q LK++
Sbjct: 109 ---KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 143 HTANVYHRDLKPKNILANAN--CKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPEL 200
H ++ H D+KP+NI+ +KI DFGLA D + AT + APE+
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV----TTATAEFAAPEI 221
Query: 201 CG----SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS 256
F++ D+W+IG + +L+G F G++ L+T+
Sbjct: 222 VDREPVGFYT------DMWAIGVLGYVLLSGLSPFAGED---------------DLETLQ 260
Query: 257 RVRNDKARRYLTSMRKKQPVQFSQ-KFPNADPSALRLLERLLAFDPKDRPTAEEALADPY 315
V K+ +F + F + P A ++ LL +P+ R T +AL P+
Sbjct: 261 NV-------------KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 307
Query: 316 FKG 318
KG
Sbjct: 308 LKG 310
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + E +LR L Y+ + + HRD+KP NIL
Sbjct: 88 EISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNIL 147
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y APE L G+ +S + DIWS+
Sbjct: 148 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMAPERLQGTHYSVQS---DIWSM 199
Query: 218 GCIFAEVLTGK 228
G E+ G+
Sbjct: 200 GLSLVELAVGR 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V ID T + VAIK I D+ E + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTR----EHYQF--FLYQLLRALKYI 142
L S+ ++++ E + + DL R + +Q L ++L+ L Y+
Sbjct: 88 GSYLKGSK-----LWIIMEYLGGG------SALDLLRAGPFDEFQIATMLKEILKGLDYL 136
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ HRD+K N+L + +K+ DFG VA T T I +V T ++ APE+
Sbjct: 137 HSEKKIHRDIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKP 229
S Y DIWS+G E+ G+P
Sbjct: 194 Q--SAYDSKADIWSLGITAIELAKGEP 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 121/307 (39%), Gaps = 44/307 (14%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+G+YG V + +G+ +A+K+I + P IV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 91 MLPPSRRDFKDIYVVFELMESDLHQVIK-----ANDDLTREHYQFFLYQLLRALKYI-HT 144
+ D ++ ELM + + K +D + E ++AL ++
Sbjct: 90 LFREG-----DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 145 ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF 204
+ HRD+KP NIL + + +K+CDFG++ + +I T R Y APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD----SIAKTRDAGCRPYMAPERIDPS 200
Query: 205 FSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL-GTPSLDTISRVRND 261
S+ Y D+WS+G E+ TG+ +P N V D +T ++ G P ++ N
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQVVKGDP-----PQLSNS 253
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGLSK 321
+ R + PS + + L D RP +E L P+ +
Sbjct: 254 EEREF-------------------SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Query: 322 VEREPSC 328
E +C
Sbjct: 295 RAVEVAC 301
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 51/244 (20%)
Query: 23 SRYKIQEVIGKGSYGVVCSAID----THTGEKVAIKK----------------------- 55
++Y +++ IGKGSYGVV A + T+ KV KK
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 56 -------IHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFEL 108
I +++ I+ HP++V++ ++ P+ +Y+VFEL
Sbjct: 73 CIQPRGPIEQVYQEIA----------ILKKLDHPNVVKLVEVLDDPNE---DHLYMVFEL 119
Query: 109 MESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKIC 168
+ + L+ + +F+ L++ ++Y+H + HRD+KP N+L + +KI
Sbjct: 120 VNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIA 179
Query: 169 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIFAEVLTG 227
DFG++ F + + ++ V T + APE ++ A+D+W++G + G
Sbjct: 180 DFGVSN-EFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
Query: 228 KPLF 231
+ F
Sbjct: 237 QCPF 240
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 5 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEV 55
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +VFE ME L ++ L E
Sbjct: 56 MMKLSHPKLVQLYGVCLEQA-----PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A+V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 169
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 170 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
AS ++ V+G+G++G V A + AIKKI E +S H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNH 61
Query: 82 PDIVEIKHIMLPPSRRDF----------KDIYVVFELMESD-LHQVIKA-NDDLTREHYQ 129
+V L RR+F +++ E E+ L+ +I + N + R+ Y
Sbjct: 62 QYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF-----------N 178
Q+L AL YIH+ + HRDLKP NI + + +KI DFGLA+ N
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
++ T + T Y A E+ Y ID++S+G IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+ + + +G+G+ G V A++ T E VA+K I D+ + H ++
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
V+ RR+ Y+ E +L I+ + + Q F +QL+ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRD+KP+N+L + LKI DFGLA V +N+ + T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 RREFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
AS ++ V+G+G++G V A + AIKKI E +S H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNH 61
Query: 82 PDIVEIKHIMLPPSRRDF----------KDIYVVFELMES-DLHQVIKA-NDDLTREHYQ 129
+V L RR+F +++ E E+ L+ +I + N + R+ Y
Sbjct: 62 QYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF-----------N 178
Q+L AL YIH+ + HRDLKP NI + + +KI DFGLA+ N
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
++ T + T Y A E+ Y ID++S+G IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 126/316 (39%), Gaps = 53/316 (16%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAX---- 68
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 METFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE 61
Query: 69 XXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREH 127
HP+I+ + + + D+ ++ EL+ +L + + L+ E
Sbjct: 62 IEREVSILRQVLHPNIITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTT 183
F+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDG 172
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
+ + + T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 173 VEFKNIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT----- 222
Query: 241 DLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFD 300
+L I+ V D + + Q + ++ F + +LL +
Sbjct: 223 -------KQETLANITAVSYDFDEEFFS-----QTSELAKDF----------IRKLLVKE 260
Query: 301 PKDRPTAEEALADPYF 316
+ R T +EAL P+
Sbjct: 261 TRKRLTIQEALRHPWI 276
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ +A+K+I P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 91 MLPPSRRDFKDIYVVFELMESDL----HQVIKANDDLTREHYQFFLYQLLRALKYIHTA- 145
+ D+++ ELM++ L QVI + + +++AL+++H+
Sbjct: 75 LFREG-----DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 146 NVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K+CDFG++ +D I + Y APE
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI----DAGCKPYMAPERINPEL 185
Query: 206 SK--YTPAIDIWSIGCIFAEV 224
++ Y+ DIWS+G E+
Sbjct: 186 NQKGYSVKSDIWSLGITMIEL 206
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ IG GS+G V TG A+K I D I++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 57
Query: 83 DIVEIKHIMLPPSRRDFKDI-------------YVVFELME--SDLHQVIKANDDLTREH 127
V ++ ++L F + ++ E ME DL I L E
Sbjct: 58 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 170
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 171 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISD--AAXXXXXXXXXXXXXHP 82
+ + +++GKGS+G V A T + AIK + + D HP
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+ H+ ++ +++ V E + DL I++ F+ +++ L++
Sbjct: 79 FLT---HMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARV-AFNDTPTTIFWTDYVATRWYRAPEL 200
+H+ + +RDLK NIL + + +KI DFG+ + D T F T Y APE+
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF----CGTPDYIAPEI 189
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
KY ++D WS G + E+L G+ F G++
Sbjct: 190 LLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 92
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 93 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 205
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 206 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 105
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 106 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 218
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 219 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 80
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 81 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 193
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 194 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 100
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 101 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 213
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 214 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
T Q ++ +++ AL+++H + +RD+K +NIL ++N + + DFGL++ D
Sbjct: 156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 183 TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+ T Y AP++ S + A+D WS+G + E+LTG F
Sbjct: 216 RAY--DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 72
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 73 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 185
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 186 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 44/292 (15%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
E++G G +G V +T TG K+A K I + D H ++++
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQ-- 150
Query: 89 HIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
L + DI +V E ++ ++I + +LT F+ Q+ ++++H
Sbjct: 151 ---LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 147 VYHRDLKPKNILA-NANCK-LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF 204
+ H DLKP+NIL N + K +KI DFGLAR P ++ T + APE+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNF-GTPEFLAPEVVNYD 263
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKAR 264
F + D+WS+G I +L+G F G N +L+ I R D
Sbjct: 264 FVSF--PTDMWSVGVIAYMLLSGLSPFLGDN------------DAETLNNILACRWDLE- 308
Query: 265 RYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYF 316
++F + A + +LL + R +A EAL P+
Sbjct: 309 --------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 100
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 101 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 213
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 214 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 72
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 73 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 185
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 186 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R K+ + +G+G++G V A ID T T VA+K + + H A
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN--------------DDL 123
H ++V + P + V+ E + +L +++ D L
Sbjct: 90 GHHLNVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 124 TREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT 183
T EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR D P
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDX 204
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+ D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 205 VRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 84
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTPEYLAPEIILS 198
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 199 --KGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K + + + + A
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
P IV + + P + F + +LM DLH + + + +F+ +++ L
Sbjct: 250 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + + ++I D GLA P V T Y APE
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 359
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLMTDLLGTPSLDTIS- 256
+ + Y + D +S+GC+ ++L G F H++D MT + D+ S
Sbjct: 360 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 418
Query: 257 --------RVRNDKARRYLTSMRKKQPVQFSQKFPNAD 286
++ D RR R Q V+ S F + D
Sbjct: 419 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 456
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K + + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
P IV + + P + F + +LM DLH + + + +F+ +++ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + + ++I D GLA P V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLMTDLLGTPSLDTIS- 256
+ + Y + D +S+GC+ ++L G F H++D MT + D+ S
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 257 --------RVRNDKARRYLTSMRKKQPVQFSQKFPNAD 286
++ D RR R Q V+ S F + D
Sbjct: 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 5 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEV 55
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +VFE ME L ++ L E
Sbjct: 56 MMKLSHPKLVQLYGVCLEQA-----PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 169
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 170 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 57
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 58 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 170
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 171 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 3 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEV 53
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +VFE ME L ++ L E
Sbjct: 54 MMKLSHPKLVQLYGVCLEQA-----PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 167
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 168 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S Y
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT-----WT-LCGTPEYLAPEIILS--KGY 236
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 16/227 (7%)
Query: 16 FSEYGDASRYKIQE-----VIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXX 69
F G+ R K+ + V+GKGS+G V + T E A+K + D+ D
Sbjct: 329 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT 388
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHY 128
P + H R +Y V E + DL I+ H
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQVGRFKEPHA 444
Query: 129 QFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTD 188
F+ ++ L ++ + + +RDLK N++ ++ +KI DFG+ + D TT
Sbjct: 445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT---KX 501
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ T Y APE+ + Y ++D W+ G + E+L G+ F G++
Sbjct: 502 FCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 8 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEV 58
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +VFE ME L ++ L E
Sbjct: 59 MMKLSHPKLVQLYGVCLEQA-----PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 172
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 173 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 16/227 (7%)
Query: 16 FSEYGDASRYKIQE-----VIGKGSYGVVCSAIDTHTGEKVAIKKIH-DIFEHISDAAXX 69
F G+ R K+ + V+GKGS+G V + T E A+K + D+ D
Sbjct: 8 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT 67
Query: 70 XXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHY 128
P + H R +Y V E + DL I+ H
Sbjct: 68 MVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQVGRFKEPHA 123
Query: 129 QFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTD 188
F+ ++ L ++ + + +RDLK N++ ++ +KI DFG+ + D TT
Sbjct: 124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT---KX 180
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 235
+ T Y APE+ + Y ++D W+ G + E+L G+ F G++
Sbjct: 181 FCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIH-DIF--EHISDAAXXXXXXXXXXXXXHPDIVEI 87
+G+GS+G V D TG + A+KK+ ++F E + A P IV +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----------PRIVPL 150
Query: 88 KHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ R+ + + EL+E L Q++K L + ++L Q L L+Y+H+
Sbjct: 151 YGAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR 205
Query: 147 VYHRDLKPKNILANAN-CKLKICDFGLARVAFNDT-PTTIFWTDYV-ATRWYRAPELCGS 203
+ H D+K N+L +++ +CDFG A D ++ DY+ T + APE+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV-- 263
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTG 227
+D+WS C+ +L G
Sbjct: 264 LGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 44/315 (13%)
Query: 25 YKIQE-VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
Y++QE V+G+G++ V + I+ T ++ A+K I HI + H +
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEMLYQCQGHRN 72
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELME--SDLHQVIKANDDLTREHYQ-----FFLYQLL 136
++E+ R Y+VFE M S L + K R H+ + +
Sbjct: 73 VLELIEFFEEEDR-----FYLVFEKMRGGSILSHIHK------RRHFNELEASVVVQDVA 121
Query: 137 RALKYIHTANVYHRDLKPKNILA---NANCKLKICDFGLAR-VAFNDTPTTIFWTDYV-- 190
AL ++H + HRDLKP+NIL N +KICDF L + N + I + +
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP 181
Query: 191 -ATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDL 246
+ Y APE+ +F S Y D+WS+G I +L+G P F G+
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSD 233
Query: 247 LGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRP 305
G + +N L ++ +F K + + +A L+ +LL D K R
Sbjct: 234 CGWDRGEACPACQN-----MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL 288
Query: 306 TAEEALADPYFKGLS 320
+A + L P+ +G +
Sbjct: 289 SAAQVLQHPWVQGCA 303
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 56
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 57 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 114
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 169
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 170 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFGLA+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R + + +G+G++G V A ID T T VA+K + + H A
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN------------DDLTR 125
H ++V + P + V+ E + +L +++ D LT
Sbjct: 88 GHHLNVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 126 EHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF 185
EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D P +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVR 202
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 203 KGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K + + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
P IV + + P + F + +LM DLH + + + +F+ +++ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + + ++I D GLA P V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLMTDLLGTPSLDTIS- 256
+ + Y + D +S+GC+ ++L G F H++D MT + D+ S
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 257 --------RVRNDKARRYLTSMRKKQPVQFSQKFPNAD 286
++ D RR R Q V+ S F + D
Sbjct: 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K + + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
P IV + + P + F + +LM DLH + + + +F+ +++ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + + ++I D GLA P V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLMTDLLGTPSLDTIS- 256
+ + Y + D +S+GC+ ++L G F H++D MT + D+ S
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419
Query: 257 --------RVRNDKARRYLTSMRKKQPVQFSQKFPNAD 286
++ D RR R Q V+ S F + D
Sbjct: 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S I VAIK + + ISD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHIMLPPSRRDFKDIYVVFELME---------------SDLHQVIKANDDLTREH 127
V ++ ++L F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFW 186
+ F +Q+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+Y I E +G+G +G+V ++T + +K + K + +D H +
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRN 62
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKAND-DLTREHYQFFLYQLLRALKY 141
I+ L S +++ ++FE + D+ + I + +L +++Q+ AL++
Sbjct: 63 ILH-----LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 142 IHTANVYHRDLKPKNILANA--NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+H+ N+ H D++P+NI+ + +KI +FG AR P F + A +Y APE
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYY-APE 173
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
+ + A D+WS+G + +L+G + L + I +
Sbjct: 174 VHQH--DVVSTATDMWSLGTLVYVLLSG---------------INPFLAETNQQIIENIM 216
Query: 260 NDKARRYLTSMRKKQPVQFSQK-FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKG 318
N + F ++ F A+ ++RLL + K R TA EAL P+ K
Sbjct: 217 NAE-------------YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK- 262
Query: 319 LSKVER 324
K+ER
Sbjct: 263 -QKIER 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 25 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEV 75
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +VFE ME L ++ L E
Sbjct: 76 MMKLSHPKLVQLYGVCLEQA-----PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 130
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 189
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 190 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIH-DIF--EHISDAAXXXXXXXXXXXXXHPDIVEI 87
+G+GS+G V D TG + A+KK+ ++F E + A P IV +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----------PRIVPL 131
Query: 88 KHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ R+ + + EL+E L Q++K L + ++L Q L L+Y+H+
Sbjct: 132 YGAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR 186
Query: 147 VYHRDLKPKNILANAN-CKLKICDFGLARVAFNDTPTTIFWT-DYV-ATRWYRAPELCGS 203
+ H D+K N+L +++ +CDFG A D T DY+ T + APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV-- 244
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTG 227
+D+WS C+ +L G
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 105 VKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S Y
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 216
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 233
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 234 --KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 1 MQQDHRKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIF 60
M D ++ E++ + A +++ E++G G+YG V TG+ AIK + D+
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIK-VMDVT 60
Query: 61 EHISDAAXXXXXXXXXXXXXHPDIVEIKHIML---PPSRRDFKDIYVVFELME----SDL 113
+ H +I + PP D +++V E +DL
Sbjct: 61 GD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD--QLWLVMEFCGAGSVTDL 117
Query: 114 HQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLA 173
+ K N L E + ++LR L ++H V HRD+K +N+L N ++K+ DFG
Sbjct: 118 IKNTKGNT-LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG-- 174
Query: 174 RVAFNDTPTTIFWTDYVATRWYRAPELCG---SFFSKYTPAIDIWSIGCIFAEVLTGKP 229
V+ T ++ T ++ APE+ + + Y D+WS+G E+ G P
Sbjct: 175 -VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +++ DFGLA+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LAGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 97 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 156
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 157 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 208
Query: 218 GCIFAEVLTGK-PLFPGKNVVHQLDLMTDLLGTP 250
G E+ G+ P+ G + +L+ ++ P
Sbjct: 209 GLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 105 VFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK 164
+F L +L +++ ND + + Q+L + Y+H N+ H DLKP+NIL ++
Sbjct: 116 IFSLCLPELAEMVSENDVIR------LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169
Query: 165 L---KICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
L KI DFG++R + + + T Y APE+ + T A D+W+IG I
Sbjct: 170 LGDIKIVDFGMSRKIGHACELR----EIMGTPEYLAPEILN--YDPITTATDMWNIGIIA 223
Query: 222 AEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQK 281
+LT F G++ + IS+V D + +
Sbjct: 224 YMLLTHTSPFVGED------------NQETYLNISQVNVDYSE---------------ET 256
Query: 282 FPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
F + A ++ LL +P+ RPTAE L+ + +
Sbjct: 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 31/236 (13%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R + + +G+G++G V A ID T T VA+K + + H A
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN---------------DD 122
H ++V + P + V+ E + +L +++ D
Sbjct: 89 GHHLNVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR D P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PD 203
Query: 183 TIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+ D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 204 XVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 216
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LXGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 45/299 (15%)
Query: 30 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG +G VC+ TG+ A KK+ + V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV---- 246
Query: 90 IMLPPSRRDFKDIYVVFELMESD---LHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ L + + +V LM H F+ ++ L+ +H
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFS 206
+ +RDLKP+NIL + + ++I D GLA P V T Y APE+ +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMAPEVVKN--E 360
Query: 207 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRY 266
+YT + D W++GC+ E++ G+ +P +++ ++ R
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVERL 400
Query: 267 LTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR-----PTAEEALADPYFKGLS 320
+ K+ P ++S++F P A L +LL DP +R +A E P FK L+
Sbjct: 401 V----KEVPEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 140 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 199
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 200 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 251
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 252 GLSLVEMAVGRYPIPPPD-AKELELM 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 HI----MLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 18/273 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + +A+K + E HP+
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + + D K IY++ E +L++ ++ + + F+ +L AL Y
Sbjct: 77 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 131
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 186
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
+ +D+W G + E L G P F P H+ + DL P L S+
Sbjct: 187 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLI 244
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLL 293
K RY R P++ + P ++ R+L
Sbjct: 245 SKLLRYHPPQR--LPLKGVMEHPWVKANSRRVL 275
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIQEVIGKGSYGVVC----SAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
+ + VIG+GSY V D KV K++ + E I
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID--WVQTEKHVFEQASN 79
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ AL
Sbjct: 80 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L ++ +K+ D+G+ + TT + + T Y APE
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 192 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 119
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTXXKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 222 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 HI----MLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 18/273 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + +A+K + E HP+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + + D K IY++ E +L++ ++ + + F+ +L AL Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
+ +D+W G + E L G P F P H+ + DL P L S+
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLI 243
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLL 293
K RY R P++ + P ++ R+L
Sbjct: 244 SKLLRYHPPQR--LPLKGVMEHPWVKANSRRVL 274
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 73/319 (22%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
++++G GS G V + G VA+K++ F I+ HP+++
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKA------NDDLTREHYQF-FLYQLLRALK 140
S + +Y+ EL +L ++++ N L +E+ L Q+ +
Sbjct: 93 Y-----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 141 YIHTANVYHRDLKPKNILANA-------------NCKLKICDFGLARVAFNDTPTTIFWT 187
++H+ + HRDLKP+NIL + N ++ I DFGL + D+ F
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 205
Query: 188 DY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGK-----NVV 237
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK F K N++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 238 HQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLL 297
G SLD + + + R L + A L+ +++
Sbjct: 266 R---------GIFSLDEMKCLHD----RSLIA------------------EATDLISQMI 294
Query: 298 AFDPKDRPTAEEALADPYF 316
DP RPTA + L P F
Sbjct: 295 DHDPLKRPTAMKVLRHPLF 313
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 43/301 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++I +G G++G V A + TG A K I E + HP I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYI 78
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
V+ +L D K ++++ E I D LT Q Q+L AL ++
Sbjct: 79 VK----LLGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ + HRDLK N+L +++ DFG V+ + T ++ T ++ APE+
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 203 SFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
K TP DIWS+G E+ +P H+L+ M LL ++
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH------HELNPMRVLL---------KIA 235
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL 319
LT P ++S +F + L+ L +P+ RP+A + L P+ +
Sbjct: 236 KSDPPTLLT------PSKWSVEFRD-------FLKIALDKNPETRPSAAQLLEHPFVSSI 282
Query: 320 S 320
+
Sbjct: 283 T 283
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 73/319 (22%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
++++G GS G V + G VA+K++ F I+ HP+++
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKA------NDDLTREHYQF-FLYQLLRALK 140
S + +Y+ EL +L ++++ N L +E+ L Q+ +
Sbjct: 93 Y-----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 141 YIHTANVYHRDLKPKNILANA-------------NCKLKICDFGLARVAFNDTPTTIFWT 187
++H+ + HRDLKP+NIL + N ++ I DFGL + D+ F
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 205
Query: 188 DY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGK-----NVV 237
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK F K N++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 238 HQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLL 297
G SLD + + + R L + A L+ +++
Sbjct: 266 R---------GIFSLDEMKCLHD----RSLIA------------------EATDLISQMI 294
Query: 298 AFDPKDRPTAEEALADPYF 316
DP RPTA + L P F
Sbjct: 295 DHDPLKRPTAMKVLRHPLF 313
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 74
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 75 LLGVCTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT------- 180
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 181 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 45/299 (15%)
Query: 30 VIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG +G VC+ TG+ A KK+ + V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV---- 246
Query: 90 IMLPPSRRDFKDIYVVFELMESD---LHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ L + + +V LM H F+ ++ L+ +H
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 147 VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFS 206
+ +RDLKP+NIL + + ++I D GLA P V T Y APE+ +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMAPEVVKN--E 360
Query: 207 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRY 266
+YT + D W++GC+ E++ G+ +P +++ ++ R
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVERL 400
Query: 267 LTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR-----PTAEEALADPYFKGLS 320
+ K+ P ++S++F P A L +LL DP +R +A E P FK L+
Sbjct: 401 V----KEVPEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIQEVIGKGSYGVVC----SAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
+ + VIG+GSY V D KV K++ + E I
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID--WVQTEKHVFEQASN 68
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ AL
Sbjct: 69 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L ++ +K+ D+G+ + TT + + T Y APE
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 181 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 253
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 254 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 308
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 91 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 150
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 202
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 251
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 252 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 306
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 89 H----IMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L S +D ++Y+V E ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIQEVIGKGSYGVVC----SAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
+ + VIG+GSY V D KV K++ + E I
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID--WVQTEKHVFEQASN 64
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ AL
Sbjct: 65 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L ++ +K+ D+G+ + TT + + T Y APE
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 177 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 236
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 81 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 140
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ ++ ++V TR Y +PE L G+ +S + DIWS+
Sbjct: 141 VNSRGEIKLCDFGVSGQLIDEMA-----NEFVGTRSYMSPERLQGTHYSVQS---DIWSM 192
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLMTD 245
G E+ G+ P + LD + +
Sbjct: 193 GLSLVEMAVGRYPRPPMAIFELLDYIVN 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 246
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 247 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 301
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 18/273 (6%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + +A+K + E HP+
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + + D K IY++ E +L++ ++ + + F+ +L AL Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKNVVHQLDLMTDLLGTPSLDTISRVRN 260
+ +D+W G + E L G P F P H+ + DL P L S+
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLI 243
Query: 261 DKARRYLTSMRKKQPVQFSQKFPNADPSALRLL 293
K RY R P++ + P ++ R+L
Sbjct: 244 SKLLRYHPPQR--LPLKGVMEHPWVKANSRRVL 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 70
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 71 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 122
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 181
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 182 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 224
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 225 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 43/301 (14%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
++I +G G++G V A + TG A K I E + HP I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE--ELEDYIVEIEILATCDHPYI 70
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
V+ +L D K ++++ E I D LT Q Q+L AL ++
Sbjct: 71 VK----LLGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H+ + HRDLK N+L +++ DFG V+ + T ++ T ++ APE+
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 203 SFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVR 259
K TP DIWS+G E+ +P H+L+ M LL ++
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH------HELNPMRVLL---------KIA 227
Query: 260 NDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFKGL 319
LT P ++S +F + L+ L +P+ RP+A + L P+ +
Sbjct: 228 KSDPPTLLT------PSKWSVEFRD-------FLKIALDKNPETRPSAAQLLEHPFVSSI 274
Query: 320 S 320
+
Sbjct: 275 T 275
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 121 DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 244
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 245 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 299
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 99 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 210
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 211 NKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N++ + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIIIS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 78
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 79 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 185 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 53/291 (18%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 69
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 70 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 121
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 180
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 181 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 223
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRP 305
I R+ N + R P PN P+ L+ + A+DP RP
Sbjct: 224 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRP 259
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 164
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 165 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 216
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 217 GLSLVEMAVGRYPIPPPD-AKELELM 241
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 447
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 448 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 499
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 558
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 559 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 601
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 602 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
+ +G GS+G V TG A+K I D I++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 89 HI----MLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ L S +D ++Y+V E ++ ++ H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 19/222 (8%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHIS----DAAXXXXXXXXXX 77
AS ++ V+G+G++G V A + AIKKI E +S +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 78 XXXHPDIVEIKHIMLPPSRRDFKD-IYVVFELMES-DLHQVIKA-NDDLTREHYQFFLYQ 134
+ +E ++ + P + K +++ E E+ L+ +I + N + R+ Y Q
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAF-----------NDTPTT 183
+L AL YIH+ + HR+LKP NI + + +KI DFGLA+ N ++
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
T + T Y A E+ Y ID +S+G IF E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDG-TGHYNEKIDXYSLGIIFFEXI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 95
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 96 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 147
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 206
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 207 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 249
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 250 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIQEVIGKGSYGVVC----SAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
+ + VIG+GSY V D +V K++ + E I
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDID--WVQTEKHVFEQASN 111
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRAL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ AL
Sbjct: 112 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 166
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L ++ +K+ D+G+ + TT + + T Y APE
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPE 223
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 224 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 26 KIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKIH----DIFEHISDAAXXXXXXXXXXXXX 80
K+++ +G G +G V A + HT KVA+K + + +++A
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEA-------NVMKTLQ 235
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQF--FLYQLLR 137
H +V++ ++ + IY++ E M + L +K+++ + + F Q+
Sbjct: 236 HDKLVKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 289
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ +I N HRDL+ NIL +A+ KI DFGLARV I WT A
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVG---AKFPIKWT---------A 337
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
PE F +T D+WS G + E++T G+ +PG
Sbjct: 338 PEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 372
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 45/311 (14%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFF 131
++ I L + D+ ++ EL+ +L + + L+ E F
Sbjct: 62 IEREVSILR-QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTTIFWT 187
+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++ + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFK 176
Query: 188 DYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 177 NIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT--------- 222
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
+L I+ V D + F + A + +LL + + R
Sbjct: 223 ---KQETLANITSVSYDFDEEF---------------FSHTSELAKDFIRKLLVKETRKR 264
Query: 305 PTAEEALADPY 315
T +EAL P+
Sbjct: 265 LTIQEALRHPW 275
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 25/213 (11%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKIHDIFEHISDAAXXXXXXXX 75
D S + IG G +G+V H G +KVAIK I E
Sbjct: 6 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEV 56
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD-LHQVIKANDDL-TREHYQFFLY 133
HP +V++ + L + I +V E ME L ++ L E
Sbjct: 57 MMKLSHPKLVQLYGVCLEQA-----PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
+ + Y+ A V HRDL +N L N +K+ DFG+ R +D T+ T + +
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVK 170
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W +PE+ FS+Y+ D+WS G + EV +
Sbjct: 171 W-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 78
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 79 LLGVCTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 185 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXX-XX 78
D + ++E+IG G +G V A G++VA+K HD E IS
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRA 138
HP+I+ ++ + L ++ +V E + + + + + Q+ R
Sbjct: 63 LKHPNIIALRGVCLKEP-----NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARG 117
Query: 139 LKYIH---TANVYHRDLKPKNILAN--------ANCKLKICDFGLARVAFNDTPTTIFWT 187
+ Y+H + HRDLK NIL +N LKI DFGLAR T +
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS---- 173
Query: 188 DYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
+ APE+ S FSK + D+WS G + E+LTG+ F G
Sbjct: 174 -AAGAYAWMAPEVIRASMFSKGS---DVWSYGVLLWELLTGEVPFRG 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 119
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 222 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + ++ G P F
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 77/328 (23%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
++++G GS G V + G VA+K++ F I+ HP+++
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKA------NDDLTREHYQF-FLYQLLRALK 140
S + +Y+ EL +L ++++ N L +E+ L Q+ +
Sbjct: 75 Y-----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 141 YIHTANVYHRDLKPKNILANA-------------NCKLKICDFGLARVAFNDTPTTIFWT 187
++H+ + HRDLKP+NIL + N ++ I DFGL + D+ + F T
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQSSFRT 187
Query: 188 DY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAEVLT-GKPLFPGK---- 234
+ T +RAPEL + + T +IDI+S+GC+F +L+ GK F K
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 235 -NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLL 293
N++ G SLD + + + R L + A L+
Sbjct: 248 SNIIR---------GIFSLDEMKCLHD----RSLIA------------------EATDLI 276
Query: 294 ERLLAFDPKDRPTAEEALADPYFKGLSK 321
+++ DP RPTA + L P F SK
Sbjct: 277 SQMIDHDPLKRPTAMKVLRHPLFWPKSK 304
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 45/311 (14%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFF 131
++ I L + D+ ++ EL+ +L + + L+ E F
Sbjct: 62 IEREVSILR-QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTTIFWT 187
+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++ + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFK 176
Query: 188 DYVATRWYRAPELCGSFFSKYTPA---IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 177 NIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT--------- 222
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
+L I+ V D + + Q + ++ F + +LL + + R
Sbjct: 223 ---KQETLANITAVSYDFDEEFFS-----QTSELAKDF----------IRKLLVKETRKR 264
Query: 305 PTAEEALADPY 315
T +EAL P+
Sbjct: 265 LTIQEALRHPW 275
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 72
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 73 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 124
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 183
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 184 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 226
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 227 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 92
Query: 87 IKHI--MLPPSRRDFKDIYVVFELMESD--LHQVIKAN-DDLTREHYQFFLYQLLRALKY 141
+ + + PP Y+V E M L + + N +++T + Q+ A++Y
Sbjct: 93 LLGVCTLEPP-------FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 146 LEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 198
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++ ++ D+W+ G + E+ T G +PG ++ DL+
Sbjct: 199 --APESLA--YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLL 244
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 64
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 65 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 116
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 175
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 176 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 218
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 219 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKIHDIFEHIS-DAAXXXXXXXXXXXXXHPD-I 84
+GKG++G V C + +TG VA+K++ +H D H D I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 73
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDDLTREHYQFFLY--QLLRA 138
V+ + + P R+ + +V E + S D Q +A D +R LY Q+ +
Sbjct: 74 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQICKG 126
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR----- 193
++Y+ + HRDL +NIL + +KI DFGLA++ D DY R
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 179
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
WY L + FS+ + D+WS G + E+ T
Sbjct: 180 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 71
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 72 LLGVCTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT------- 177
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
APE ++K++ D+W+ G + E+ T G +PG
Sbjct: 178 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 26 KIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKIH----DIFEHISDAAXXXXXXXXXXXXX 80
K+++ +G G +G V A + HT KVA+K + + +++A
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEA-------NVMKTLQ 241
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQF--FLYQLLR 137
H +V++ ++ + IY++ E M + L +K+++ + + F Q+
Sbjct: 242 HDKLVKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ +I N HRDL+ NIL +A+ KI DFGLARV D T +W A
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKW-TA 353
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
PE F +T D+WS G + E++T G+ +PG
Sbjct: 354 PEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 45/311 (14%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFF 131
++ I L + D+ ++ EL+ +L + + L+ E F
Sbjct: 62 IEREVSILR-QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTTIFWT 187
+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++ + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFK 176
Query: 188 DYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 177 NIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT--------- 222
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
+L I+ V D + F + A + +LL + + R
Sbjct: 223 ---KQETLANITSVSYDFDEEF---------------FSHTSELAKDFIRKLLVKETRKR 264
Query: 305 PTAEEALADPY 315
T +EAL P+
Sbjct: 265 LTIQEALRHPW 275
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
+T E + +Q+ R ++++ + HRDL +NIL + N +KICDFGLAR + + P
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN-PD 254
Query: 183 TIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEV--LTGKPLFPG 233
+ D + APE S F K Y+ D+WS G + E+ L G P +PG
Sbjct: 255 YVRKGDTRLPLKWMAPE---SIFDKIYSTKSDVWSYGVLLWEIFSLGGSP-YPG 304
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 78
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 79 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT------- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 185 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 190 GLSLVEMAVGRYPIPPPD-AKELELM 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT E F YQ+ + ++++ + HRDL +N+L +KICDFGLAR +D+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 183 TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 229 VVRGNARLPVKW-MAPE--SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 120/311 (38%), Gaps = 45/311 (14%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFF 131
++ I L + D+ ++ EL+ +L + + L+ E F
Sbjct: 62 IEREVSILR-QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTTIFWT 187
+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++ + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFK 176
Query: 188 DYVATRWYRAPELCGSFFSKYTPA---IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 177 NIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT--------- 222
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
+L I+ V D + F + A + +LL + + R
Sbjct: 223 ---KQETLANITSVSYDFDEEF---------------FSHTSELAKDFIRKLLVKETRKR 264
Query: 305 PTAEEALADPY 315
T +EAL P+
Sbjct: 265 LTIQEALRHPW 275
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 74
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 75 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT------- 180
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 181 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAEVLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 190 GLSLVEMAVGRYPIPPPD-AKELELM 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKIHDIFEHIS-DAAXXXXXXXXXXXXXHPD-I 84
+GKG++G V C + +TG VA+K++ +H D H D I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 74
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDDLTREHYQFFLY--QLLRA 138
V+ + + P R+ + +V E + S D Q +A D +R LY Q+ +
Sbjct: 75 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQICKG 127
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR----- 193
++Y+ + HRDL +NIL + +KI DFGLA++ D DY R
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 180
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
WY L + FS+ + D+WS G + E+ T
Sbjct: 181 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKIHDIFEHIS-DAAXXXXXXXXXXXXXHPD-I 84
+GKG++G V C + +TG VA+K++ +H D H D I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 86
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDDLTREHYQFFLY--QLLRA 138
V+ + + P R+ + +V E + S D Q +A D +R LY Q+ +
Sbjct: 87 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQICKG 139
Query: 139 LKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR----- 193
++Y+ + HRDL +NIL + +KI DFGLA++ D DY R
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 192
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
WY L + FS+ + D+WS G + E+ T
Sbjct: 193 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 119
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 222 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 86
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 87 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 139
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 140 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 192
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 193 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 238
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 45/311 (14%)
Query: 13 MEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXX 72
ME F + Y I E +G G + +V + TG + A K I S
Sbjct: 2 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE 61
Query: 73 XXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFF 131
++ I L + D+ ++ EL+ +L + + L+ E F
Sbjct: 62 IEREVSILR-QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 132 LYQLLRALKYIHTANVYHRDLKPKNI-LANANC---KLKICDFGLARVAFNDTPTTIFWT 187
+ Q+L + Y+HT + H DLKP+NI L + N +K+ DFGLA ++ + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFK 176
Query: 188 DYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
+ T + APE+ Y P D+WSIG I +L+G F G
Sbjct: 177 NIFGTPEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPFLGDT--------- 222
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
+L I+ V D + + Q + ++ F + +LL + + R
Sbjct: 223 ---KQETLANITAVSYDFDEEFFS-----QTSELAKDF----------IRKLLVKETRKR 264
Query: 305 PTAEEALADPY 315
T +EAL P+
Sbjct: 265 LTIQEALRHPW 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 78
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 79 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 185 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 26 KIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKIH----DIFEHISDAAXXXXXXXXXXXXX 80
K+++ +G G +G V A + HT KVA+K + + +++A
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEA-------NVMKTLQ 68
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQF--FLYQLLR 137
H +V++ ++ + IY++ E M + L +K+++ + + F Q+
Sbjct: 69 HDKLVKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 122
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ +I N HRDL+ NIL +A+ KI DFGLARV D T +W A
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKW-TA 180
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
PE F +T D+WS G + E++T G+ +PG
Sbjct: 181 PEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 24 RYKIQEVIGKGSYGVVCSA----ID-THTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXX 78
R + + +G+G++G V A ID T T VA+K + + H A
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQVIKAN------------DDLTR 125
H ++V + P + V+ E + +L +++ D LT
Sbjct: 88 GHHLNVVNLLGACTKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 126 EHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF 185
EH + +Q+ + ++++ + HRDL +NIL + +KI DFGLAR + D P +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD-PDYVR 202
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 203 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 190 GLSLVEMAVGRYPIPPPD-AKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN-VYHRDLKPKNIL 158
+I + E M+ L QV+K + + +++ L Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAEVLTGKPLFPGKNVVHQLDLM 243
G E+ G+ P + +L+LM
Sbjct: 190 GLSLVEMAVGRYPIPPPD-AKELELM 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 75
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 76 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT------- 181
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 182 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 75
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 76 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 181
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 182 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 447
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 448 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 499
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 558
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 559 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 601
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 602 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 142/354 (40%), Gaps = 74/354 (20%)
Query: 25 YKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXH 81
+KI++ IG+G++ V A + EK+A+K + I AA
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGG---Q 79
Query: 82 PDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKY 141
+++ +K+ K+ +VV + + + + L+ + + ++ L +ALK
Sbjct: 80 DNVMGVKYCFR-------KNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKR 132
Query: 142 IHTANVYHRDLKPKNILANANC-KLKICDFGLA---------------------RVAFND 179
IH + HRD+KP N L N K + DFGLA R + N
Sbjct: 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 180 TPTTIFWTDYVATR----WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGK 234
+ VA R +RAPE+ ++ T AID+WS G IF +L+G+ P +
Sbjct: 193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ-TTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 235 NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQ----FSQKFPNADPSAL 290
+ + L + + G S +TI + + L S K+ P Q ++ D S
Sbjct: 252 DDLTALAQIMTIRG--SRETIQAAKT-FGKSILCS--KEVPAQDLRKLCERLRGMDSSTP 306
Query: 291 RLLERL------------------------LAFDPKDRPTAEEALADPYFKGLS 320
+L + L +P R TAEEAL P+FK +S
Sbjct: 307 KLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 78
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 79 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 184
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 185 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 77
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 78 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 131 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 183
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 184 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 75
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 76 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 181
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 182 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y AP + S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPAIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 280
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 281 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HR+L +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 334 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 386
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 387 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX---XXXXXXXXXHPDIV 85
+V+G G++G V I GE V I I + HP +V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 86 EIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L P+ I +V +LM L V + D++ + + Q+ + + Y+
Sbjct: 104 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ HRDL +N+L + +KI DFGLAR+ D + +W L
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---ALECI 214
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT--GKP 229
+ K+T D+WS G E++T GKP
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXX---XXXXXXXXXHPDIV 85
+V+G G++G V I GE V I I + HP +V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 86 EIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ + L P+ I +V +LM L V + D++ + + Q+ + + Y+
Sbjct: 81 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ HRDL +N+L + +KI DFGLAR+ D + +W L
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---ALECI 191
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT--GKP 229
+ K+T D+WS G E++T GKP
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 53/298 (17%)
Query: 24 RYKIQEVIGKGSYGVVCSAI---DTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
R ++ IG+G +G V I + VAIK + SD+
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 81 --HPDIVEIKHIMLPPSRRDFKDIYVVFELME----SDLHQVIKANDDLTREHYQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 119
Query: 135 LLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRW 194
L AL Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDT 254
APE F ++T A D+W G E+L + + G + D
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 ISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALA 312
I R+ N + R P PN P+ L+ + A+DP RP E A
Sbjct: 222 IGRIENGE--------RLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 277
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 278 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 330
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HR+L +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 331 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 383
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 384 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 429
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHI--SDAAXXXXXXXXXXXXX 80
+Y + +++G+GSYG V +D+ T + A+K + + A
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 81 HPDIVEIKHIMLPPSRRDFKDIYVVFEL----MESDLHQVIKANDDLTREHYQFFLYQLL 136
H +++++ ++ + + +Y+V E M+ L V + + + H F QL+
Sbjct: 65 HKNVIQLVDVLY---NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC--QLI 119
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV----AFNDTPTTIFWTDYVAT 192
L+Y+H+ + H+D+KP N+L LKI G+A A +DT T +
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT-----SQGS 174
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 236
++ PE+ + +DIWS G + TG F G N+
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 73
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 74 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 179
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 180 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 71
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 72 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT------- 177
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
APE ++K++ D+W+ G + E+ T G +PG
Sbjct: 178 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ A+K+I P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 91 MLPPSRRDFKDIYVVFELMESDL----HQVIKANDDLTREHYQFFLYQLLRALKYIHTA- 145
+ D+++ EL ++ L QVI + + +++AL+++H+
Sbjct: 102 LFREG-----DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 146 NVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K CDFG++ +D I + Y APE
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI----DAGCKPYXAPERINPEL 212
Query: 206 SK--YTPAIDIWSIGCIFAEV 224
++ Y+ DIWS+G E+
Sbjct: 213 NQKGYSVKSDIWSLGITXIEL 233
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 287
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 288 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 116/308 (37%), Gaps = 63/308 (20%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--------HDIFEHISDAAXXXXXXX 74
+ Y++ ++GKG +G V + +VAIK I + + ++
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 75 XXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFE--LMESDLHQVIKANDDLTREHYQFFL 132
HP ++ + + +V E L DL I L + F
Sbjct: 91 VGAGGGHPGVIRLLDWF-----ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANA--NCKLKICDFGLARVAFNDTPTTIFWTDYV 190
Q++ A+++ H+ V HRD+K +NIL + C K+ DFG + +D P +TD+
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFG-SGALLHDEP----YTDFD 199
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTP 250
TR Y PE PA +WS+G + +++ G F
Sbjct: 200 GTRVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDIPF------------------- 239
Query: 251 SLDTISRVRNDKARRYLTSMRKKQPVQFSQKFP-NADPSALRLLERLLAFDPKDRPTAEE 309
R ++ ++ FP + P L+ R LA P RP+ EE
Sbjct: 240 -------------------ERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEE 280
Query: 310 ALADPYFK 317
L DP+ +
Sbjct: 281 ILLDPWMQ 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 92
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 93 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 210 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKI-----------HDIFEHISDAAXXXXXXXXXXXX 79
IG GS+G V A D E VAIKK+ DI + +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR----------FLQKL 111
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM---ESDLHQVIKANDDLTREHYQFFLYQLL 136
HP+ ++ + L R+ ++V E SDL +V K L + L
Sbjct: 112 RHPNTIQYRGCYL----RE-HTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 164
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ L Y+H+ N+ HRD+K NIL + +K+ DFG A + P F V T ++
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWM 217
Query: 197 APELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
APE+ + +Y +D+WS+G E+ KP N + L
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 262
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD-IV 85
+GKG++G V C + +TG VA+K++ D H D IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIV 71
Query: 86 EIKHIMLPPSRRDFKDIYVVFELMES----DLHQVIKANDDLTREHYQFFLY--QLLRAL 139
+ + + P R + + +V E + S D Q +A D +R LY Q+ + +
Sbjct: 72 KYRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQICKGM 124
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
+Y+ + HRDL +NIL + +KI DFGLA++ D + + ++ APE
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 200 -LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
L + FS+ + D+WS G + E+ T
Sbjct: 185 SLSDNIFSRQS---DVWSFGVVLYELFT 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 43/195 (22%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND-------TPTTIFW 186
Q+ A++++H+ + HRDLKP NI + +K+ DFGL D TP +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 187 T--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
T V T+ Y +PE + Y+ +DI+S+G I E+ L+ + ++ ++T
Sbjct: 232 THXGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRIIT 284
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
D VRN K P+ F+QK+P +++ +L+ P +R
Sbjct: 285 D------------VRNLKF-----------PLLFTQKYPQEH----MMVQDMLSPSPTER 317
Query: 305 PTAEEALADPYFKGL 319
P A + + + F+ L
Sbjct: 318 PEATDIIENAIFENL 332
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G YG V + VA+K + + + E + +AA HP++V+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 319
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + ++ + Q+ A++Y
Sbjct: 320 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 372
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HR+L +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 373 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT------- 425
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM 243
APE ++K++ D+W+ G + E+ T G +PG ++ +L+
Sbjct: 426 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 471
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 42/220 (19%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHD----IFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+G G +G V + VA+K + + + E + +AA HP++V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-------HPNLVQ 71
Query: 87 IKHIML--PPSRRDFKDIYVVFELME-SDLHQVIKAND--DLTREHYQFFLYQLLRALKY 141
+ + PP Y++ E M +L ++ + +++ + Q+ A++Y
Sbjct: 72 LLGVCTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRW 194
+ N HRDL +N L N +K+ DFGL+R+ DT T I WT
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT------- 177
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
APE ++K++ D+W+ G + E+ T G +PG
Sbjct: 178 --APESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 43/175 (24%)
Query: 104 VVFELMESDLHQVIKAND--DLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILAN- 160
++FE + L+++I N+ E + + ++L+AL Y+ ++ H DLKP+NIL +
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 161 ------------------------ANCKLKICDFGLARVAFNDTPTTIFWTDY----VAT 192
+ +K+ DFG A F +DY + T
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT----------FKSDYHGSIINT 222
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
R YRAPE+ + + + D+WS GC+ AE+ TG LF + L +M ++
Sbjct: 223 RQYRAPEVILNL--GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII 275
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 77/328 (23%)
Query: 28 QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEI 87
++++G GS G V + G VA+K++ F I+ HP+++
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 88 KHIMLPPSRRDFKDIYVVFELMESDLHQVIKA------NDDLTREHYQF-FLYQLLRALK 140
S + +Y+ EL +L ++++ N L +E+ L Q+ +
Sbjct: 75 Y-----CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 141 YIHTANVYHRDLKPKNILANA-------------NCKLKICDFGLARVAFNDTPTTIFWT 187
++H+ + HRDLKP+NIL + N ++ I DFGL + D+ F
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 187
Query: 188 DY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAEVLT-GKPLFPGK---- 234
+ T +RAPEL + + T +IDI+S+GC+F +L+ GK F K
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 235 -NVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLL 293
N++ G SLD + + + R L + A L+
Sbjct: 248 SNIIR---------GIFSLDEMKCLHD----RSLIA------------------EATDLI 276
Query: 294 ERLLAFDPKDRPTAEEALADPYFKGLSK 321
+++ DP RPTA + L P F SK
Sbjct: 277 SQMIDHDPLKRPTAMKVLRHPLFWPKSK 304
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 IMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ L S +D ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEALAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAEVLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 142
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 143 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 202 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 240
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 241 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 30 VIGKGSYGVVCSA--IDTHTGE-KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVE 86
VIGKG +GVV ID + AIK + I E + HP+++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLA 86
Query: 87 IKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHT 144
+ IMLPP +V+ M DL Q I++ + T + F Q+ R ++Y+
Sbjct: 87 LIGIMLPPEGLP----HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 145 ANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF 204
HRDL +N + + + +K+ DFGLAR I +Y + + +R L +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLAR--------DILDREYYSVQQHRHARLPVKW 194
Query: 205 FS-------KYTPAIDIWSIGCIFAEVLT-GKP 229
+ ++T D+WS G + E+LT G P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 287
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 288 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT------- 183
F Q+ + YI N HRDL+ N+L + + KI DFGLARV ++ T
Sbjct: 115 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
I WT APE F +T D+WS G + E++T GK +PG+ D+
Sbjct: 175 IKWT---------APEAIN--FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT---NADV 220
Query: 243 MTDL 246
MT L
Sbjct: 221 MTAL 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F YQ+ + + ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+W APE F YT D+WS G E+ + G +PG V
Sbjct: 226 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 269
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKI-----------HDIFEHISDAAXXXXXXXXXXXX 79
IG GS+G V A D E VAIKK+ DI + +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR----------FLQKL 72
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM---ESDLHQVIKANDDLTREHYQFFLYQLL 136
HP+ ++ + L ++V E SDL +V K L + L
Sbjct: 73 RHPNTIQYRGCYLRE-----HTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 125
Query: 137 RALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 196
+ L Y+H+ N+ HRD+K NIL + +K+ DFG A + P F V T ++
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWM 178
Query: 197 APELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 240
APE+ + +Y +D+WS+G E+ KP N + L
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F YQ+ + + ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+W APE F YT D+WS G E+ + G +PG V
Sbjct: 233 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 111
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 112 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 168
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 229 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 83 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 141
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 142 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 200
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 201 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 239
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 240 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 87 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 145
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 146 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 204
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 205 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 243
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 244 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ ++H + HRD+K NIL + KI DFGLAR A T+ + V T Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXSRIVGTTAYMA 203
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
PE + + TP DI+S G + E++TG P
Sbjct: 204 PE---ALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F YQ+ + + ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+W APE F YT D+WS G E+ + G +PG V
Sbjct: 228 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 271
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F YQ+ + + ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+W APE F YT D+WS G E+ + G +PG V
Sbjct: 233 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 162 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 259
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 260 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 269
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 270 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F YQ+ + + ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNV 236
+W APE F YT D+WS G E+ + G +PG V
Sbjct: 210 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 112
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 113 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 169
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 230 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 212
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 213 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 93
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 211 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 93
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 211 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 215
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 216 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 91
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 92 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 148
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 209 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 92
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 93 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 210 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 90
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 91 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 147
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 208 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N +KI DFGLAR N +
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 210
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 211 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 85
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 86 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 142
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 203 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + YI N HRDL+ NIL KI DFGLAR+ D T +
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIK 171
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
W APE + + ++T D+WS G + E++T G+ +PG N
Sbjct: 172 W-TAPE--AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 88
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +KY+
Sbjct: 89 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 206 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFND-------TPTTIFW 186
Q+ A++++H+ + HRDLKP NI + +K+ DFGL D TP +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 187 --TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
T V T+ Y +PE + Y+ +DI+S+G I E+ L+P + ++ +T
Sbjct: 186 RHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLT 238
Query: 245 DLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDR 304
D VRN K P F+QK+ P +++ +L+ P +R
Sbjct: 239 D------------VRNLKF-----------PPLFTQKY----PCEYVMVQDMLSPSPMER 271
Query: 305 PTAEEALADPYFKGL 319
P A + + F+ L
Sbjct: 272 PEAINIIENAVFEDL 286
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A DT T++ V Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 287
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 288 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 24 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
R +++ V+ +G + V A D +G + A+K++ E + A HP+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS-NEEEKNRAIIQEVCFMKKLSGHPN 87
Query: 84 IVEI---KHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD---LTREHYQFFLYQLLR 137
IV+ I S + ++ EL + L + +K + L+ + YQ R
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 138 ALKYIHTAN--VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTI-FWTDYV---- 190
A++++H + HRDLK +N+L + +K+CDFG A TTI + DY
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA--------TTISHYPDYSWSAQ 199
Query: 191 ------------ATRWYRAPELCGSFFSKY--TPAIDIWSIGCIF 221
T YR PE+ +S + DIW++GCI
Sbjct: 200 RRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALGCIL 243
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ ++H + HRD+K NIL + KI DFGLAR A T+ V T Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXXRIVGTTAYMA 203
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
PE + + TP DI+S G + E++TG P
Sbjct: 204 PE---ALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F +Q+ + ++Y+ ++ HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 127/337 (37%), Gaps = 89/337 (26%)
Query: 25 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V + T EK A+K + D P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPH 72
Query: 84 IVEIKHIM--LPPSRRDFKDIYVVFELMES-DLHQVIKANDD--LTREHYQFFLYQLLRA 138
IV I + L R K + +V E ++ +L I+ D T + + A
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVYHRDLKPKNILANA---NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------------- 168
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTI 255
E G KY + D+WS+G I +L G P F H L + +P + T
Sbjct: 169 ---ETTG---EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI------SPGMKT- 212
Query: 256 SRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-----LLERLLAFDPKDRPTAEEA 310
R+R + +FPN + S + L+ LL +P R T E
Sbjct: 213 -RIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254
Query: 311 LADPYFKGLSKVEREPSCQPISKMEFEFERRRVTKED 347
+ P+ +KV + P RV KED
Sbjct: 255 MNHPWIMQSTKVPQTP-----------LHTSRVLKED 280
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQL R ++Y+ + HRDL +N+L N ++I DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ ++ WT +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-----WTARQGAK 173
Query: 194 W---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
+ + APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 174 FPIKWTAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 112 DLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN-CKLKICDF 170
DL I L E + F +Q+L A+++ H V HRD+K +NIL + N +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 171 GLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
G + DT +TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 203 G-SGALLKDT----VYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F +Q+ + ++Y+ + HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIK 170
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 171 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKI--HDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+G+G +G V C +TGE+VA+K + HI+D H +I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY---HENI 85
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQF-FLYQLLRALKYI 142
V+ K I K ++ E + S L + + N + Q + Q+ + + Y+
Sbjct: 86 VKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + ++KI DFGL + D D + ++ APE
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL- 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT 226
SK+ A D+WS G E+LT
Sbjct: 202 -MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIK 88
EV+GKG +G TGE + +K++ E HP++++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT--FLKEVKVMRCLEHPNVLKFI 73
Query: 89 HIMLPPSRRDFKDIYVVFELMESDLHQVIKANDD-LTREHYQFFLYQLLRALKYIHTANV 147
++ R +F Y+ L +IK+ D F + + Y+H+ N+
Sbjct: 74 GVLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFND-----------TPTTIFWTDYVATRWYR 196
HRDL N L N + + DFGLAR+ ++ P V ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVL 225
APE+ Y +D++S G + E++
Sbjct: 190 APEMING--RSYDEKVDVFSFGIVLCEII 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 429
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 430 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 152
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 153 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 270 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +T T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRT 188
Query: 183 TIFWTDYVATRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKP 229
++ T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSL 252
W APE + + ++T D+WS G + E+ T G+ +PG ++ L
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG------------MVNREVL 225
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAE--E 309
D + R + P P +L L+ + DP++RPT E +
Sbjct: 226 DQVER-------------------GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQ 266
Query: 310 ALADPYFKGLSKVEREPSCQP 330
A + YF EP QP
Sbjct: 267 AFLEDYF-----TSTEPQYQP 282
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 177
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 178 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 31 IGKGSYGVV--C--SAIDTHTGEKVAIKKI--HDIFEHISDAAXXXXXXXXXXXXXHPDI 84
+G+G +G V C +TGE+VA+K + HI+D H +I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY---HENI 73
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQF-FLYQLLRALKYI 142
V+ K I K ++ E + S L + + N + Q + Q+ + + Y+
Sbjct: 74 VKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + ++KI DFGL + D D + ++ APE
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL- 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT 226
SK+ A D+WS G E+LT
Sbjct: 190 -MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 346
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 347 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +T T
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRT 161
Query: 183 TIFWTD-YVATRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKP 229
I D ++ T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 162 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F +Q+ + ++Y+ + HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSL 252
W APE + + ++T D+WS G + E+ T G+ +PG ++ L
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG------------MVNREVL 225
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAE--E 309
D + R + P P +L L+ + DP++RPT E +
Sbjct: 226 DQVER-------------------GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQ 266
Query: 310 ALADPYFKGLSKVEREPSCQP 330
A + YF EP QP
Sbjct: 267 AFLEDYF-----TSTEPQYQP 282
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 346
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 347 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 173
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 174 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 346
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 347 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 171
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 172 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSL 252
W APE + + ++T D+WS G + E+ T G+ +PG ++ L
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG------------MVNREVL 225
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAE--E 309
D + R + P P +L L+ + DP++RPT E +
Sbjct: 226 DQVER-------------------GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQ 266
Query: 310 ALADPYFKGLSKVEREPSCQP 330
A + YF EP QP
Sbjct: 267 AFLEDYF-----TSTEPQYQP 282
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGLAR+ D T +
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 169
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 170 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 94
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 95 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 212 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 98
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 99 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 155
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 216 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 93
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 211 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 93
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 211 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 91
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 92 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 148
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR ++ ++ + +W L
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 209 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 42/200 (21%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL+ NIL N K+ DFGL R+ D T +
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRL-IEDNEYTARQGAKFPIK 347
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPSL 252
W APE + + ++T D+WS G + E+ T G+ +PG ++ L
Sbjct: 348 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG------------MVNREVL 392
Query: 253 DTISRVRNDKARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAE--EA 310
D + R R P P S L+ + DP++RPT E +A
Sbjct: 393 DQVER-----------GYRMPCP-------PECPESLHDLMCQCWRKDPEERPTFEYLQA 434
Query: 311 LADPYFKGLSKVEREPSCQP 330
+ YF EP QP
Sbjct: 435 FLEDYF-----TSTEPQXQP 449
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 102 IYVVFELM-ESDLHQVIKANDD--LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E M + L +K+++ + F Q+ + YI N HRDL+ N+L
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 141
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG 218
+ + KI DFGLARV D T +W APE F +T ++WS G
Sbjct: 142 VSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKW-TAPEAIN--FGCFTIKSNVWSFG 197
Query: 219 CIFAEVLT-GKPLFPGKNVVHQLDLMTDL 246
+ E++T GK +PG+ D+M+ L
Sbjct: 198 ILLYEIVTYGKIPYPGRT---NADVMSAL 223
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ N HRDL NIL N K+ DFGLAR+ D T +
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIK 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG---KNVVHQLD 241
W APE + + ++T D+WS G + E+ T G+ +PG + V+ Q++
Sbjct: 181 W-TAPE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q R + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ S Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 176 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 223
Query: 245 DLLGTPSLD-TISRVRNDKARR 265
+++G SL +S+VR++ +R
Sbjct: 224 EMVGRGSLSPDLSKVRSNCPKR 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 28 QEVIGKGSYGVVC-SAIDTHTGEKV--AIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDI 84
EVIG+G +G V + + G+K+ A+K ++ I + I + + HP++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNV 94
Query: 85 VEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIK-ANDDLTREHYQFFLYQLLRALKYIH 143
+ + I L R + + V+ + DL I+ + T + F Q+ + +K++
Sbjct: 95 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIF--WTDYVATRWYRAPELC 201
+ HRDL +N + + +K+ DFGLAR + ++ + +W L
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKN 235
K+T D+WS G + E++T G P +P N
Sbjct: 212 T---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTD 245
+W APE + F + YT D+WS G + E+ T G +PG V L+ +
Sbjct: 217 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ ++H + HRD+K NIL + KI DFGLAR A + V T Y A
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMA 197
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
PE + + TP DI+S G + E++TG P
Sbjct: 198 PE---ALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 5 HRKKNSPEMEFFSEYGDASR--YKIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKIHDIFE 61
H + P+ ++ + + R K+ E +G G +G V + HT KVA+K + +
Sbjct: 3 HMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLK---Q 57
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMES-DLHQVIK-- 118
H +V + ++ + IY++ E ME+ L +K
Sbjct: 58 GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTP 111
Query: 119 ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
+ LT Q+ + +I N HRDL+ NIL + KI DFGLAR+ +
Sbjct: 112 SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
Query: 179 DTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPL 230
+ T I WT APE + +T D+WS G + E++T G+
Sbjct: 172 NEYTAREGAKFPIKWT---------APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIP 220
Query: 231 FPG 233
+PG
Sbjct: 221 YPG 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 47/306 (15%)
Query: 25 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-HDIFEHISDAAXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + VA+K + E HP+
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDDLTREHYQFFLYQLLRALKYI 142
I+ + + D + IY++ E +L++ ++ + + + +L AL Y
Sbjct: 85 ILRLYNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A + T+ T Y PE+
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM-----CGTLDYLPPEMIE 194
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDK 262
+ +D+W IG + E+L G P F S N+
Sbjct: 195 G--RMHNEKVDLWCIGVLCYELLVGNPPFE-----------------------SASHNET 229
Query: 263 ARRYLTSMRKKQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFKGLSK 321
RR V+ KFP + P+ + L+ +LL +P +R + A P+ + S+
Sbjct: 230 YRRI---------VKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSR 280
Query: 322 VEREPS 327
PS
Sbjct: 281 RVLPPS 286
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 21 DASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
D Y + +G+G + V H G A+K+I + D
Sbjct: 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQREADMHRLFN 84
Query: 81 HPDIVEI----------KH---IMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREH 127
HP+I+ + KH ++LP +R + +++ ++ + LT +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRG---------TLWNEIERLKDKGNFLTEDQ 135
Query: 128 YQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFG---LARVAFNDTPTTI 184
+ L + R L+ IH HRDLKP NIL + + D G A + + +
Sbjct: 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 185 FWTDYVATRW---YRAPELCGSFFSKYTPAI-----DIWSIGCIFAEVLTGK 228
D+ A R YRAPEL FS + + D+WS+GC+ ++ G+
Sbjct: 196 TLQDWAAQRCTISYRAPEL----FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ ++H + HRD+K NIL + KI DFGLAR A + + V T Y A
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYXA 194
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
PE + + TP DI+S G + E++TG P
Sbjct: 195 PE---ALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 150 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 198
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPG 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRX 188
Query: 183 TIFWTDYVATRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKP 229
++ T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 196
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 27 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVE 86
I+E IG GS+G V A + H G VA+K + + H HP+IV
Sbjct: 41 IKEKIGAGSFGTVHRA-EWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 87 IKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ P Y+ + LH+ A + L Y + + + Y+H N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 147 --VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF 204
+ HR+LK N+L + +K+CDFGL+R+ T + T + APE+
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 205 FSKYTPAIDIWSIGCIFAEVLT 226
S D++S G I E+ T
Sbjct: 215 PSNEKS--DVYSFGVILWELAT 234
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 151 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 199
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPG 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 123 LTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPT 182
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRX 188
Query: 183 TIFWTDYVATRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKP 229
++ T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 27 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVE 86
I+E IG GS+G V A + H G VA+K + + H HP+IV
Sbjct: 41 IKEKIGAGSFGTVHRA-EWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 87 IKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN 146
+ P Y+ + LH+ A + L Y + + + Y+H N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 147 --VYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSF 204
+ HRDLK N+L + +K+CDFGL+R+ + + T + APE+
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS---KXAAGTPEWMAPEVLRDE 214
Query: 205 FSKYTPAIDIWSIGCIFAEVLT 226
S D++S G I E+ T
Sbjct: 215 PSNEKS--DVYSFGVILWELAT 234
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 191
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPG 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG 218
+ KI DFGLAR+ D T +W APE + +T D+WS G
Sbjct: 142 VSDTLSCKIADFGLARL-IEDAEXTAREGAKFPIKW-TAPEAIN--YGTFTIKSDVWSFG 197
Query: 219 CIFAEVLT-GKPLFPG 233
+ E++T G+ +PG
Sbjct: 198 ILLTEIVTHGRIPYPG 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 208
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 209 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 243 MTD 245
+ +
Sbjct: 265 LKE 267
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + + YIH+ + HRDLKP NI ++KI DFGL ND T T
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----TRSKGTL 199
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
Y +PE S Y +D++++G I AE+L
Sbjct: 200 RYMSPEQISS--QDYGKEVDLYALGLILAELL 229
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 208
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 209 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 243 MTD 245
+ +
Sbjct: 265 LKE 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 144 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 192
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPG 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 201
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 202 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 243 MTD 245
+ +
Sbjct: 258 LKE 260
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR + +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 205
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTD 245
+W APE + F + YT D+WS G + E+ T G +PG V L+ +
Sbjct: 206 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 200
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 201 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 243 MTD 245
+ +
Sbjct: 257 LKE 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 249
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 250 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 243 MTD 245
+ +
Sbjct: 306 LKE 308
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 208
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 209 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 243 MTD 245
+ +
Sbjct: 265 LKE 267
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDY--- 189
YQ+ R ++Y+ + HRDL +N+L + +KI DFGLAR I DY
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--------DIHHIDYYKK 193
Query: 190 -----VATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDL 242
+ +W APE + F + YT D+WS G + E+ T G +PG V L
Sbjct: 194 TTNGRLPVKWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 243 MTD 245
+ +
Sbjct: 250 LKE 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 119 ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
AN L+ F Q+ + + ++ + N HRD+ +N+L KI DFGLAR N
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D+ + + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 217 DSNYIVKGNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 185
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 147 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 195
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPG 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 148 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 196
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANA 161
IY+V E DL+ +K + + + +L A+ IH + H DLKP N L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 162 NCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
+ LK+ DFG+A D + V T Y PE G SK +P
Sbjct: 162 DGMLKLIDFGIANQMQPDXXXVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 213 DIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ +
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 259
Query: 273 KQPVQFSQKFPNADPSALR-LLERLLAFDPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L DPK R + E LA PY +
Sbjct: 260 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 50/336 (14%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD--IFEHISDAAXXXXXXXXX 76
Y DA RY + +G G + V A D VA+K + ++ ++
Sbjct: 16 YKDA-RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND 74
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKD-----IYVVFELMESDLHQVIKAND--DLTREHYQ 129
D + HI+ + K + +VFE++ +L +IK + + + +
Sbjct: 75 ADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 130 FFLYQLLRALKYIHT-ANVYHRDLKPKNILANAN------CKLKICDFGLARVAFNDTPT 182
QLL L Y+H + H D+KP+N+L ++KI D G N
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG------NACWY 188
Query: 183 TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF-PGKNVVHQLD 241
+T+ + TR YR+PE+ + + DIWS C+ E++TG LF P + + D
Sbjct: 189 DEHYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 242 -----LMTDLLG-TPSLDTISRVRNDKARRYLTSMR---------KKQPVQ--FSQKFPN 284
+ +LLG PS +RN K R + R K P++ ++K+
Sbjct: 247 DDHIAQIIELLGELPSY----LLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 302
Query: 285 ADPSALRL---LERLLAFDPKDRPTAEEALADPYFK 317
+ A + L +L DP+ R A + P+ K
Sbjct: 303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANANCKLKICDFGLARVAFNDTPTT-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ T I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAEVLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 50/336 (14%)
Query: 19 YGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHD--IFEHISDAAXXXXXXXXX 76
Y DA RY + +G G + V A D VA+K + ++ ++
Sbjct: 16 YKDA-RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND 74
Query: 77 XXXXHPDIVEIKHIMLPPSRRDFKD-----IYVVFELMESDLHQVIKAND--DLTREHYQ 129
D + HI+ + K + +VFE++ +L +IK + + + +
Sbjct: 75 ADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 130 FFLYQLLRALKYIHT-ANVYHRDLKPKNILANAN------CKLKICDFGLARVAFNDTPT 182
QLL L Y+H + H D+KP+N+L ++KI D G N
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG------NACWY 188
Query: 183 TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF-PGKNVVHQLD 241
+T+ + TR YR+PE+ + + DIWS C+ E++TG LF P + + D
Sbjct: 189 DEHYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 242 -----LMTDLLG-TPSLDTISRVRNDKARRYLTSMR---------KKQPVQ--FSQKFPN 284
+ +LLG PS +RN K R + R K P++ ++K+
Sbjct: 247 DDHIAQIIELLGELPSY----LLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 302
Query: 285 ADPSALRL---LERLLAFDPKDRPTAEEALADPYFK 317
+ A + L +L DP+ R A + P+ K
Sbjct: 303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 26 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIV 85
K+ + IGKG +G V + + G KVA+K I ++ + A H ++V
Sbjct: 24 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 86 EIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
++ +++ +Y+V E M + L +++ L + F + A++Y+
Sbjct: 78 QLLGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT---IFWTDYVATRWYRAPE 199
N HRDL +N+L + + K+ DFGL + A + T + WT APE
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APE 184
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKNVV 237
K++ D+WS G + E+ + G+ P P K+VV
Sbjct: 185 ALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 26 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIV 85
K+ + IGKG +G V + + G KVA+K I ++ + A H ++V
Sbjct: 196 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 86 EIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
++ +++ + +Y+V E M + L +++ L + F + A++Y+
Sbjct: 250 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT---IFWTDYVATRWYRAPE 199
N HRDL +N+L + + K+ DFGL + A + T + WT APE
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APE 356
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKNVVHQLD 241
K++ D+WS G + E+ + G+ P P K+VV +++
Sbjct: 357 ALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 400
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q R + Y+H ++ HRDLK NI + + +KI DFGLA F +I
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ S Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 188 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 235
Query: 245 DLLGTPSLD-TISRVRNDKARR 265
+++G SL +S+VR++ +R
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKR 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF-PVRW-SP 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 190 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 26 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIV 85
K+ + IGKG +G V + + G KVA+K I ++ + A H ++V
Sbjct: 9 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 62
Query: 86 EIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
++ +++ + +Y+V E M + L +++ L + F + A++Y+
Sbjct: 63 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT---IFWTDYVATRWYRAPE 199
N HRDL +N+L + + K+ DFGL + A + T + WT APE
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APE 169
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKNVV 237
K++ D+WS G + E+ + G+ P P K+VV
Sbjct: 170 ALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q R + Y+H ++ HRDLK NI + + +KI DFGLA F +I
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ S Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 188 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 235
Query: 245 DLLGTPSLD-TISRVRNDKARR 265
+++G SL +S+VR++ +R
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKR 257
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 101/289 (34%), Gaps = 46/289 (15%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXX-XXXXXHPDIVEIKH 89
+G GSYG V G A+K+ F D A HP V ++
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 90 IMLPPSRRDFKDIYVVFELMESDLHQVIKA-NDDLTREHYQFFLYQLLRALKYIHTANVY 148
+ + +Y+ EL L Q +A L +L L AL ++H+ +
Sbjct: 125 -----AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 149 HRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKY 208
H D+KP NI + K+ DFGL + T Y APEL Y
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGL----LVELGTAGAGEVQEGDPRYMAPEL---LQGSY 232
Query: 209 TPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLT 268
A D++S+G EV L G QL + YL
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLR----------------------QGYL- 269
Query: 269 SMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALADPYFK 317
P +F+ + S L + +L DPK R TAE LA P +
Sbjct: 270 ------PPEFTAGLSSELRSVLVM---MLEPDPKLRATAEALLALPVLR 309
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 102 IYVVFELME-SDLHQVIKAND-------------DLTREHYQFFLYQLLRALKYIHTANV 147
+ +VFE M+ DL++ ++A+ +LT+ Q+ + Y+ + +
Sbjct: 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF 149
Query: 148 YHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSK 207
HRDL +N L N +KI DFG++R ++ + + RW PE + K
Sbjct: 150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW-MPPE--SIMYRK 206
Query: 208 YTPAIDIWSIGCIFAEVLT 226
+T D+WS+G + E+ T
Sbjct: 207 FTTESDVWSLGVVLWEIFT 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 23/221 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGE-----KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ +G G++G V A G+ KVA+K + A H +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVI--KANDDLTREHYQ--------FFLY 133
IV +L + + DL + KA DL +E + F
Sbjct: 112 IVN----LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + + ++ + N HRD+ +N+L KI DFGLAR ND+ + + +
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
W APE F YT D+WS G + E+ + G +PG
Sbjct: 228 W-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 190 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ + + HRDL +N L AN +KI DFG++R ++ + + R
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GK-PLFPGKN 235
W PE + K+T D+WS G I E+ T GK P F N
Sbjct: 201 WM-PPE--SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 169
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 170 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ + +I N HR+L+ NIL
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 159 ANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG 218
+ KI DFGLAR+ D T +W APE + +T D+WS G
Sbjct: 138 VSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAIN--YGTFTIKSDVWSFG 193
Query: 219 CIFAEVLT-GKPLFPG 233
+ E++T G+ +PG
Sbjct: 194 ILLTEIVTHGRIPYPG 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 101 DIYVVFELMESDLHQVIKANDDLTREH-YQFFLYQLLRALKYIHTA-NVYHRDLKPKNIL 158
D+++ ELM + ++ K E +++AL Y+ V HRD+KP NIL
Sbjct: 98 DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL 157
Query: 159 ANANCKLKICDFGLARVAFNDTPT--TIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216
+ ++K+CDFG++ +D + Y+A P+ Y D+WS
Sbjct: 158 LDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD---PTKPDYDIRADVWS 214
Query: 217 IGCIFAEVLTGKPLFPGKNVVHQLDLMTDLL 247
+G E+ TG+ FP KN +++T +L
Sbjct: 215 LGISLVELATGQ--FPYKNCKTDFEVLTKVL 243
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 23/221 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGE-----KVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ +G G++G V A G+ KVA+K + A H +
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVI--KANDDLTREHYQ--------FFLY 133
IV +L + + DL + KA DL +E + F
Sbjct: 104 IVN----LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + + ++ + N HRD+ +N+L KI DFGLAR ND+ + + +
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
W APE F YT D+WS G + E+ + G +PG
Sbjct: 220 W-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 116 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 173
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 174 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 180
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 181 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 174
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 175 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 26 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIV 85
K+ + IGKG +G V + + G KVA+K I ++ + A H ++V
Sbjct: 15 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 68
Query: 86 EIKHIMLPPSRRDFKDIYVVFELM-ESDLHQVIKANDD--LTREHYQFFLYQLLRALKYI 142
++ +++ + +Y+V E M + L +++ L + F + A++Y+
Sbjct: 69 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 143 HTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCG 202
N HRDL +N+L + + K+ DFGL + A + T + +W L
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALRE 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKNVV 237
+ FS + D+WS G + E+ + G+ P P K+VV
Sbjct: 180 AAFSTKS---DVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 119 ANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFN 178
AN + F Q+ + + ++ + N HRD+ +N+L KI DFGLAR N
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 179 DTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D+ + + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 217 DSNYIVKGNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F Q+ + + ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 231 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 33/243 (13%)
Query: 8 KNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKV--AIKKIHDIFEHISD 65
KN+P+ + D + K Q+VIG+G++G V A G ++ AIK++ +
Sbjct: 11 KNNPDPTIYPVL-DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH 69
Query: 66 AAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFE---------------LME 110
HP+I+ +++ R + +Y+ E ++E
Sbjct: 70 RDFAGELEVLCKLGHHPNII---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 111 SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKIC 168
+D I + L+ + F + R + Y+ HRDL +NIL N KI
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184
Query: 169 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV--LT 226
DFGL+R T+ + RW L +S YT D+WS G + E+ L
Sbjct: 185 DFGLSRGQEVYVKKTM---GRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 227 GKP 229
G P
Sbjct: 239 GTP 241
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 46/285 (16%)
Query: 27 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+ E IG+G++G V S VA+K + A HP+IV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVR 176
Query: 87 IKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLL----RALKY 141
+ + + IY+V EL++ D ++ R L Q++ ++Y
Sbjct: 177 LIGVC-----TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEY 228
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+ + HRDL +N L LKI DFG++R + V +W APE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEAL 287
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
+ +Y+ D+WS G + E + LG +S N
Sbjct: 288 N--YGRYSSESDVWSFGILLWETFS--------------------LGASPYPNLS---NQ 322
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
+ R + + K + + P+A RL+E+ A++P RP+
Sbjct: 323 QTREF---VEKGGRLPCPELCPDA---VFRLMEQCWAYEPGQRPS 361
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 33/243 (13%)
Query: 8 KNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKV--AIKKIHDIFEHISD 65
KN+P+ + D + K Q+VIG+G++G V A G ++ AIK++ +
Sbjct: 1 KNNPDPTIYPVL-DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH 59
Query: 66 AAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFE---------------LME 110
HP+I+ +++ R + +Y+ E ++E
Sbjct: 60 RDFAGELEVLCKLGHHPNII---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 111 SDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKIC 168
+D I + L+ + F + R + Y+ HRDL +NIL N KI
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 174
Query: 169 DFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV--LT 226
DFGL+R T+ + RW L +S YT D+WS G + E+ L
Sbjct: 175 DFGLSRGQEVYVKKTM---GRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLG 228
Query: 227 GKP 229
G P
Sbjct: 229 GTP 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
F Q+ + + ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 223 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 79 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 193 ESI---LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 76 DNPHVCRLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 190 ESI---LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
A++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF-PVRW-SP 174
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 175 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 76 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 190 ESI---LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 24/251 (9%)
Query: 31 IGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS+ V +DT T +VA ++ D S+ HP+IV +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF-YD 92
Query: 91 MLPPSRRDFKDIYVVFELMESD-LHQVIKANDDLTREHYQFFLYQLLRALKYIHTAN--V 147
+ + K I +V EL S L +K + + + Q+L+ L+++HT +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 148 YHRDLKPKNI-LANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFS 206
HRDLK NI + +KI D GLA + F + T + APE +
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAPE---XYEE 204
Query: 207 KYTPAIDIWSIG-CIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTIS--------- 256
KY ++D+++ G C + P +N +T + S D ++
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 264
Query: 257 -RVRNDKARRY 266
+R +K RY
Sbjct: 265 GCIRQNKDERY 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 22 ASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI------HDIFEHISDAAXXXXXXXX 75
+ +Y +G G++G V +A+D ++V +K I D +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 76 XXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQL 135
H +I+++ I + F + + DL I + L + QL
Sbjct: 83 LSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 136 LRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWY 195
+ A+ Y+ ++ HRD+K +NI+ + +K+ DFG A A+ + +F+T + T Y
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLER-GKLFYT-FCGTIEY 195
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIG 218
APE L G+ + P +++WS+G
Sbjct: 196 CAPEVLMGNPYRG--PELEMWSLG 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 46/285 (16%)
Query: 27 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPDIVE 86
+ E IG+G++G V S VA+K + A HP+IV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP-DLKAKFLQEARILKQYSHPNIVR 176
Query: 87 IKHIMLPPSRRDFKDIYVVFELMES-DLHQVIKANDDLTREHYQFFLYQLL----RALKY 141
+ + + IY+V EL++ D ++ R L Q++ ++Y
Sbjct: 177 LIGVC-----TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEY 228
Query: 142 IHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELC 201
+ + HRDL +N L LKI DFG++R + V +W APE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPEAL 287
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRND 261
+ +Y+ D+WS G + E + LG +S N
Sbjct: 288 N--YGRYSSESDVWSFGILLWETFS--------------------LGASPYPNLS---NQ 322
Query: 262 KARRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
+ R + + K + + P+A RL+E+ A++P RP+
Sbjct: 323 QTREF---VEKGGRLPCPELCPDA---VFRLMEQCWAYEPGQRPS 361
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 62/304 (20%)
Query: 27 IQEVIGKGSYGVVCSAIDT-HTGEK--VAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ ++G+G +G V + T H GEK VA+K + + HP
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPH 86
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV++ I+ ++Y EL H + + + L + Q+ +A+ Y+
Sbjct: 87 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ N HRD+ +NIL + +K+ DFGL+R ++ DY R P S
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--------DYYKASVTRLPIKWMS 194
Query: 204 ----FFSKYTPAIDIWSIGCIFAEVLT-GK-PLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
F ++T A D+W E+L+ GK P F +N D++G
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--------KDVIGV-------- 238
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNAD---PSALRLLERLLAFDPKDRPTAEE---AL 311
++ + P D P L+ R +DP DRP E +L
Sbjct: 239 ------------------LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
Query: 312 ADPY 315
+D Y
Sbjct: 281 SDVY 284
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 46/232 (19%)
Query: 101 DIYVVFELMESD-----LHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK 155
D+ +V +M ++ V + N F+ Q++ L+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + + ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKAR-RYLTSMRKK 273
+++G E++ + F R R +K + L +
Sbjct: 373 FALGVTLYEMIAARGPF-------------------------RARGEKVENKELKQRVLE 407
Query: 274 QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD-----PYFKGLS 320
Q V + KF P++ E LL DP+ R + D P F+ +S
Sbjct: 408 QAVTYPDKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 109 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 223 ESI---LHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 46/232 (19%)
Query: 101 DIYVVFELMESD-----LHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK 155
D+ +V +M ++ V + N F+ Q++ L+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + + ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKAR-RYLTSMRKK 273
+++G E++ + F R R +K + L +
Sbjct: 373 FALGVTLYEMIAARGPF-------------------------RARGEKVENKELKQRVLE 407
Query: 274 QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD-----PYFKGLS 320
Q V + KF P++ E LL DP+ R + D P F+ +S
Sbjct: 408 QAVTYPDKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 62/304 (20%)
Query: 27 IQEVIGKGSYGVVCSAIDT-HTGEK--VAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ ++G+G +G V + T H GEK VA+K + + HP
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPH 74
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV++ I+ ++Y EL H + + + L + Q+ +A+ Y+
Sbjct: 75 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ N HRD+ +NIL + +K+ DFGL+R ++ DY R P S
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--------DYYKASVTRLPIKWMS 182
Query: 204 ----FFSKYTPAIDIWSIGCIFAEVLT-GK-PLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
F ++T A D+W E+L+ GK P F +N D++G
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--------KDVIGV-------- 226
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNAD---PSALRLLERLLAFDPKDRPTAEE---AL 311
++ + P D P L+ R +DP DRP E +L
Sbjct: 227 ------------------LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
Query: 312 ADPY 315
+D Y
Sbjct: 269 SDVY 272
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 46/232 (19%)
Query: 101 DIYVVFELMESD-----LHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK 155
D+ +V +M ++ V + N F+ Q++ L+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + + ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKAR-RYLTSMRKK 273
+++G E++ + F R R +K + L +
Sbjct: 373 FALGVTLYEMIAARGPF-------------------------RARGEKVENKELKQRVLE 407
Query: 274 QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD-----PYFKGLS 320
Q V + KF P++ E LL DP+ R + D P F+ +S
Sbjct: 408 QAVTYPDKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 62/304 (20%)
Query: 27 IQEVIGKGSYGVVCSAIDT-HTGEK--VAIKKIHDIFEHISDAAXXXXXXXXXXXXXHPD 83
+ ++G+G +G V + T H GEK VA+K + + HP
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPH 70
Query: 84 IVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
IV++ I+ ++Y EL H + + + L + Q+ +A+ Y+
Sbjct: 71 IVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGS 203
+ N HRD+ +NIL + +K+ DFGL+R ++ DY R P S
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--------DYYKASVTRLPIKWMS 178
Query: 204 ----FFSKYTPAIDIWSIGCIFAEVLT-GK-PLFPGKNVVHQLDLMTDLLGTPSLDTISR 257
F ++T A D+W E+L+ GK P F +N D++G
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--------KDVIGV-------- 222
Query: 258 VRNDKARRYLTSMRKKQPVQFSQKFPNAD---PSALRLLERLLAFDPKDRPTAEE---AL 311
++ + P D P L+ R +DP DRP E +L
Sbjct: 223 ------------------LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
Query: 312 ADPY 315
+D Y
Sbjct: 265 SDVY 268
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 98 DFKDIYVVFELMESDLHQVIKANDD--LTREHYQFFL---------YQLLRALKYIHT-A 145
++ ++Y+++E ME+D ++K ++ + ++Y F+ +L + YIH
Sbjct: 114 NYDEVYIIYEYMEND--SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171
Query: 146 NVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFF 205
N+ HRD+KP NIL + N ++K+ DFG + + T + PE +
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG-----SRGTYEFMPPEFFSNES 226
Query: 206 SKYTPAIDIWSIG-CIFAEVLTGKPLFPGKNVVHQL-DLMTDLLGTPSLDTISRVRNDKA 263
S +DIWS+G C++ P ++V ++ T + P LD RN
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP-LD-----RN--- 277
Query: 264 RRYLTSMRKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEAL 311
+L + K+ + N D L+L R +P +R T+E+AL
Sbjct: 278 -HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK---NPAERITSEDAL 321
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 4 DHRKKNSPEMEFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKV--AIKKIHDIFE 61
+ + KN+P+ + D + K Q+VIG+G++G V A G ++ AIK++ +
Sbjct: 4 NRKVKNNPDPTIYPVL-DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 62
Query: 62 HISDAAXXXXXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFE-------------- 107
HP+I+ +++ R + +Y+ E
Sbjct: 63 KDDHRDFAGELEVLCKLGHHPNII---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKS 117
Query: 108 -LMESDLHQVIKAN--DDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCK 164
++E+D I + L+ + F + R + Y+ HR+L +NIL N
Sbjct: 118 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYV 177
Query: 165 LKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV 224
KI DFGL+R T+ + RW L +S YT D+WS G + E+
Sbjct: 178 AKIADFGLSRGQEVYVKKTM---GRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEI 231
Query: 225 --LTGKP 229
L G P
Sbjct: 232 VSLGGTP 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 85 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 199 ESI---LHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 100 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 214 ESI---LHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ HRDL +N L N +KI DFGL+R ++ D + R
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
W PE F+++YT D+W+ G + E+ +
Sbjct: 242 W-MPPE--SIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 507 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 559
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 560 GVLMWEAFS 568
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
L+Q+ +KY+ N HRDL +N+L KI DFGL++ D ++T
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARS 171
Query: 191 ATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
A +W + APE F K++ D+WS G E L+
Sbjct: 172 AGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALS 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 46/232 (19%)
Query: 101 DIYVVFELMESD-----LHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPK 155
D+ +V +M ++ V + N F+ Q++ L+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANANCKLKICDFGLA-RVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + + ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKAR-RYLTSMRKK 273
+++G E++ + F R R +K + L +
Sbjct: 373 FALGVTLYEMIAARGPF-------------------------RARGEKVENKELKQRVLE 407
Query: 274 QPVQFSQKFPNADPSALRLLERLLAFDPKDRPTAEEALAD-----PYFKGLS 320
Q V + KF P++ E LL DP+ R + D P F+ +S
Sbjct: 408 QAVTYPDKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 506 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 558
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 559 GVLMWEAFS 567
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 81 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 195 ESI---LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + + YIH+ + +RDLKP NI ++KI DFGL ND T
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----XRSKGTL 185
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
Y +PE S Y +D++++G I AE+L
Sbjct: 186 RYMSPEQISS--QDYGKEVDLYALGLILAELL 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV---------AFNDT 180
F Q+ + Y+H + HRDL +N+L + + +KI DFGLA+ D
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +FW APE + K+ A D+WS G E+LT
Sbjct: 198 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 232
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 69 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 183 ESI---LHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 106 FELMESDLHQVIKANDDLTREH------YQFFLYQLLRALKYIHTANVYHRDLKPKNILA 159
F +M S V +DD T + + + Q+ ++Y+ + +V H+DL +N+L
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 178
Query: 160 NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+KI D GL R + + + RW APE + K++ DIWS G
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW-MAPE--AIMYGKFSIDSDIWSYGV 235
Query: 220 IFAEVLT 226
+ EV +
Sbjct: 236 VLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 106 FELMESDLHQVIKANDDLTREH------YQFFLYQLLRALKYIHTANVYHRDLKPKNILA 159
F +M S V +DD T + + + Q+ ++Y+ + +V H+DL +N+L
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 161
Query: 160 NANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+KI D GL R + + + RW APE + K++ DIWS G
Sbjct: 162 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW-MAPE--AIMYGKFSIDSDIWSYGV 218
Query: 220 IFAEVLT 226
+ EV +
Sbjct: 219 VLWEVFS 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
Y + + ++ + HRDL +N L + + +K+ DFG+ R +D + T +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF-PV 169
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W APE+ F KY+ D+W+ G + EV +
Sbjct: 170 KW-SAPEVFHYF--KYSSKSDVWAFGILMWEVFS 200
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 72 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 186 ESI---LHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 131 FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYV 190
L+Q+ +KY+ N HR+L +N+L KI DFGL++ D ++T
Sbjct: 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARS 497
Query: 191 ATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
A +W + APE F K++ D+WS G E L+
Sbjct: 498 AGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALS 534
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 113/296 (38%), Gaps = 47/296 (15%)
Query: 24 RYKIQEVIGKGSYGVVCSA-IDTHTGE--KVAIKKIHDIFEHISDAAXXXXXXXXXXXXX 80
++ + ++GKG +G V A + G KVA+K + SD
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 81 HPDIVEIKHIMLPPSRRDFKDI-YVVFELME-SDLHQVIKAND------DLTREHYQFFL 132
HP + ++ + L + I V+ M+ DLH + A+ +L + F+
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 133 YQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVAT 192
+ ++Y+ + N HRDL +N + + + + DFGL+R ++ +
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLMTDLLGTPS 251
+W L + ++ ++ D+W+ G E++T G+ + G
Sbjct: 204 KWLALESLADNLYTVHS---DVWAFGVTMWEIMTRGQTPYAG------------------ 242
Query: 252 LDTISRVRNDKARRYLTSM-RKKQPVQFSQKFPNADPSALRLLERLLAFDPKDRPT 306
+ N + YL R KQP P L+ + + DPK RP+
Sbjct: 243 ------IENAEIYNYLIGGNRLKQP-------PECMEEVYDLMYQCWSADPKQRPS 285
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 162 HYAKISDFGLSKALRADENYYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 214
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 215 GVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 216
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 217 GVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 216
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 217 GVLMWEAFS 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+ G++G V + GEKV I I ++ E S A
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 79 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 193 ESI---LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV---------AFNDT 180
F Q+ + Y+H+ + HR+L +N+L + + +KI DFGLA+ D
Sbjct: 121 LFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +FW APE + K+ A D+WS G E+LT
Sbjct: 181 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 206
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 207 GVLMWEAFS 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 148 HYAKISDFGLSKALRADENXYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 200
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 201 GVLMWEAFS 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 148 HYAKISDFGLSKALRADENYYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 200
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 201 GVLMWEAFS 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 25/239 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEK----VAIKKIHD-----IFEHISDAAXXXXXXXXXXXX 79
+V+G G +G V + GE V IK I D F+ ++D
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD------HMLAIGSL 90
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRAL 139
H IV + + P S Y+ + S L V + L + + Q+ + +
Sbjct: 91 DHAHIVRLLG-LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+ + HR+L +N+L + ++++ DFG+A + D ++ +W
Sbjct: 147 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM--TDLLGTPSLDTI 255
+ F KYT D+WS G E++T G + G + DL+ + L P + TI
Sbjct: 207 I---HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI 262
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 142 HYAKISDFGLSKALRADENYYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 194
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 195 GVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANAN 162
+V E+ E L++ ++ N + ++ ++Q+ +KY+ +N HRDL +N+L
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143
Query: 163 CKLKICDFGLARVAFND-----TPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKWP----VKWY-APE-CINYY-KFSSKSDVWSF 196
Query: 218 GCIFAEVLT 226
G + E +
Sbjct: 197 GVLMWEAFS 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+G G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARV---------AFNDT 180
F Q+ + Y+H + HR+L +N+L + + +KI DFGLA+ D
Sbjct: 121 LFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 181 PTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +FW APE + K+ A D+WS G E+LT
Sbjct: 181 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 22/138 (15%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 199 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 246
Query: 245 DLLGTPSLD-TISRVRND 261
++G L +S+VR++
Sbjct: 247 FMVGRGYLSPDLSKVRSN 264
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 22/138 (15%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 200 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 247
Query: 245 DLLGTPSLD-TISRVRND 261
++G L +S+VR++
Sbjct: 248 FMVGRGYLSPDLSKVRSN 265
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 25/239 (10%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEK----VAIKKIHD-----IFEHISDAAXXXXXXXXXXXX 79
+V+G G +G V + GE V IK I D F+ ++D
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD------HMLAIGSL 72
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRAL 139
H IV + + P S Y+ + S L V + L + + Q+ + +
Sbjct: 73 DHAHIVRLLG-LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 140 KYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE 199
Y+ + HR+L +N+L + ++++ DFG+A + D ++ +W
Sbjct: 129 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLM--TDLLGTPSLDTI 255
+ F KYT D+WS G E++T G + G + DL+ + L P + TI
Sbjct: 189 I---HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI 244
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+ G++G V + GEKV I I ++ E S A
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXX 79
+ +K +V+ G++G V + GEKV I I ++ E S A
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHIMLPPSRRDFKDIYVVFELM--ESDLHQVIKANDDLTREHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 ALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRA 197
+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 29 EVIGKGSYGVVCSAIDTHTGEKVAIK-KIHDIFEHISDAAXXXXX--XXXXXXXXHPDIV 85
+V+G G++G V I GE V I I + E+ S A P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 86 EIKHIMLPPSRRDFKDIYVVFELMESD--LHQVIKANDDLTREHYQFFLYQLLRALKYIH 143
+ I L + + +V +LM L V + L + + Q+ + + Y+
Sbjct: 83 RLLGICLTST------VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 144 TANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTD--YVATRWYRAPELC 201
+ HRDL +N+L + +KI DFGLAR+ D T + D V +W +
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL--DIDETEYHADGGKVPIKWMALESI- 193
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT 226
++T D+WS G E++T
Sbjct: 194 --LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 177 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 224
Query: 245 DLLGTPSLD-TISRVRND--KARRYLTS--MRKKQ 274
++G L +S+VR++ KA + L + ++KK+
Sbjct: 225 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 259
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 177 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 224
Query: 245 DLLGTPSLD-TISRVRND--KARRYLTS--MRKKQ 274
++G L +S+VR++ KA + L + ++KK+
Sbjct: 225 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 259
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 174 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 221
Query: 245 DLLGTPSLD-TISRVRND--KARRYLTS--MRKKQ 274
++G L +S+VR++ KA + L + ++KK+
Sbjct: 222 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 256
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ + HRDL +N L +KI DFG++R ++ + + R
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
W PE + K+T D+WS G + E+ T GK +QL T ++D
Sbjct: 226 WM-PPE--SILYRKFTTESDVWSFGVVLWEIFT-----YGKQPWYQLS------NTEAID 271
Query: 254 TISRVR 259
I++ R
Sbjct: 272 CITQGR 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 172 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 219
Query: 245 DLLGTPSLD-TISRVRND--KARRYLTS--MRKKQ 274
++G L +S+VR++ KA + L + ++KK+
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 254
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVA--------FNDTPTTIF 185
Q + + Y+H ++ HRDLK NI + + +KI DFGLA V F +I
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMT 244
W APE+ + Y+ D+++ G + E++TG+ P N+ ++ D +
Sbjct: 172 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR-DQII 219
Query: 245 DLLGTPSLD-TISRVRND--KARRYLTS--MRKKQ 274
++G L +S+VR++ KA + L + ++KK+
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKR 254
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ + HRDL +N L +KI DFG++R ++ + + R
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
W PE + K+T D+WS G + E+ T GK +QL T ++D
Sbjct: 197 WM-PPE--SILYRKFTTESDVWSFGVVLWEIFT-----YGKQPWYQLS------NTEAID 242
Query: 254 TISRVRN 260
I++ R
Sbjct: 243 CITQGRE 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 134 QLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATR 193
Q+ + Y+ + HRDL +N L +KI DFG++R ++ + + R
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLD 253
W PE + K+T D+WS G + E+ T GK +QL T ++D
Sbjct: 203 WM-PPE--SILYRKFTTESDVWSFGVVLWEIFT-----YGKQPWYQLS------NTEAID 248
Query: 254 TISRVRN 260
I++ R
Sbjct: 249 CITQGRE 255
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 138/371 (37%), Gaps = 89/371 (23%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY + +G G + V + D G+K K+ EH ++ A P
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQ-GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDP 95
Query: 83 DIVEIKHIMLPPSRRDFK-------DIYVVFELMESDLHQ-VIKAN-DDLTREHYQFFLY 133
+ + M+ DFK I +VFE++ L + +IK+N L + +
Sbjct: 96 N--DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153
Query: 134 QLLRALKYIHT-ANVYHRDLKPKNILANAN------------------------------ 162
Q+L+ L Y+HT + H D+KP+NIL + N
Sbjct: 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 213
Query: 163 -------------------CKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCG 202
K+KI D G N +T+ + TR YR+ E L G
Sbjct: 214 PATAGNFLVNPLEPKNAEKLKVKIADLG------NACWVHKHFTEDIQTRQYRSLEVLIG 267
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKNVVHQLD---LMTDLLGTPSLDTIS 256
S ++ TPA DIWS C+ E+ TG LF G+ D L+ +LLG I
Sbjct: 268 SGYN--TPA-DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 324
Query: 257 RVRNDK----ARRYLTSMRKKQPVQ----FSQKFPNADPSALRLLERL---LAFDPKDRP 305
+ K + L + K +P +K+ + A + L L P+ R
Sbjct: 325 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA 384
Query: 306 TAEEALADPYF 316
TA E L P+
Sbjct: 385 TAAECLRHPWL 395
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 28/231 (12%)
Query: 21 DASRYKIQEVIGKGSYGVVCSA---IDTHTGEKVAIKKI-------HDIFEHISDAAXXX 70
D + + +++G+G +G V + T KVA+K + +I E +S+AA
Sbjct: 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMK 91
Query: 71 XXXXXXXXXXHPDIVEIKHIMLPPSRRDFKDIYVVFELME-SDLHQ-VIKANDDLTREHY 128
HP+++ + + + S + V+ M+ DLH ++ + + +H
Sbjct: 92 DFS-------HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 129 QF-----FLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTT 183
F+ + ++Y+ N HRDL +N + + + + DFGL++ ++
Sbjct: 145 PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR 204
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W L YT D+W+ G E+ T G +PG
Sbjct: 205 QGRIAKMPVKWIAIESLADRV---YTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 139/371 (37%), Gaps = 89/371 (23%)
Query: 23 SRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAAXXXXXXXXXXXXXHP 82
RY + +G G + V + D + VA+K + EH ++ A P
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDP 79
Query: 83 DIVEIKHIMLPPSRRDFK-------DIYVVFELMESDLHQ-VIKAN-DDLTREHYQFFLY 133
+ + M+ DFK I +VFE++ L + +IK+N L + +
Sbjct: 80 N--DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 137
Query: 134 QLLRALKYIHT-ANVYHRDLKPKNILANAN------------------------------ 162
Q+L+ L Y+HT + H D+KP+NIL + N
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 163 -------------------CKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPE-LCG 202
K+KI D G N +T+ + TR YR+ E L G
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLG------NACWVHKHFTEDIQTRQYRSLEVLIG 251
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKNVVHQLD---LMTDLLGTPSLDTIS 256
S ++ TPA DIWS C+ E+ TG LF G+ D L+ +LLG I
Sbjct: 252 SGYN--TPA-DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 308
Query: 257 RVRNDK----ARRYLTSMRKKQPVQ----FSQKFPNADPSALRLLERL---LAFDPKDRP 305
+ K + L + K +P +K+ + A + L L P+ R
Sbjct: 309 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA 368
Query: 306 TAEEALADPYF 316
TA E L P+
Sbjct: 369 TAAECLRHPWL 379
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,289,679
Number of Sequences: 62578
Number of extensions: 698318
Number of successful extensions: 4579
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1365
Number of HSP's gapped (non-prelim): 1397
length of query: 619
length of database: 14,973,337
effective HSP length: 105
effective length of query: 514
effective length of database: 8,402,647
effective search space: 4318960558
effective search space used: 4318960558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)