BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007065
(619 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423909|ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/593 (79%), Positives = 524/593 (88%), Gaps = 2/593 (0%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+EKQL+VAVEGTAAMGPYWQ++VSDYL+KIIR FC NELAGQK S+SN ELSLV FN H
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
GSYC+CLVQRSGWT+DVD+FL WLS +PFAGGGFNDAAIAEGL+EALMMFSVA NGSQ Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
QNVDGQRHCILVAA+NP+PLPTPVY+PQMQN++QNE+ E+Q ESRLSDAE VAKSF QCS
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
VSLSVICPKQLPKL +IYNA KRNPR ADPPVDN KNPHFLVLIS++FMEARAALSRPG+
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGI-NRPPISVGNVPTATVKVEPSTVTSM 299
+N+ NQ+PVKMDIA V V+ P SIPSVNGI NRP I+VG VPTATVKVEPSTVTS+
Sbjct: 241 SNMTANQSPVKMDIASVPQVSAAPPASIPSVNGIMNRPTIAVGAVPTATVKVEPSTVTSI 300
Query: 300 VNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMA 359
+GP FPHIPSVPR ASQGVPSLQTSSPSSTSQEMI++GD+V ++KP+VSG+SQ LRP+
Sbjct: 301 TSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPVV 360
Query: 360 PAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQ 419
PAAANV+ILNNLSQARQVM++AAL+GGTSIGLQSMG T MAMHMSNMISSGMASSVP +Q
Sbjct: 361 PAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPATQ 420
Query: 420 PVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGA 479
VFSS QS ++SI GSGTL GT+QV QNS L SFTSA SN+S NSN ISQP+ LQGG
Sbjct: 421 TVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNLQGGV 480
Query: 480 SMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGM 538
SMGQ+V GMSQGN GGQMVQ+GI MNQNMMSGLGPSG+SSGTGTMIPTPGMSQQ Q GM
Sbjct: 481 SMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGM 540
Query: 539 QPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
L VNNN A NM L QQTS A+ ++QSKYVKVWEG+LSGQRQGQPVFIT+LE
Sbjct: 541 PSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLE 593
>gi|297737854|emb|CBI27055.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/592 (77%), Positives = 514/592 (86%), Gaps = 12/592 (2%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+EKQL+VAVEGTAAMGPYWQ++VSDYL+KIIR FC NELAGQK S+SN ELSLV FN H
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
GSYC+CLVQRSGWT+DVD+FL WLS +PFAGGGFNDAAIAEGL+EALMMFSVA NGSQ Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
QNVDGQRHCILVAA+NP+PLPTPVY+PQMQN++QNE+ E+Q ESRLSDAE VAKSF QCS
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
VSLSVICPKQLPKL +IYNA KRNPR ADPPVDN KNPHFLVLIS++FMEARAALSRPG+
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGI-NRPPISVGNVPTATVKVEPSTVTSM 299
+N+ NQ+PVKMDIA V V+ P SIPSVNGI NRP I+VG VPTATVKVEPSTVTS+
Sbjct: 241 SNMTANQSPVKMDIASVPQVSAAPPASIPSVNGIMNRPTIAVGAVPTATVKVEPSTVTSI 300
Query: 300 VNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMA 359
+GP FPHIPSVPR ASQGVPSLQTSSPSSTSQEMI++GD+V ++KP+VSG+SQ LRP+
Sbjct: 301 TSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPVV 360
Query: 360 PAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQ 419
PAAANV+ILNNLSQARQVM++AAL+GGTSIGLQSMG T MAMHMSNMISSGMASSVP +Q
Sbjct: 361 PAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPATQ 420
Query: 420 PVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGA 479
VFSS QS ++SI GSGTL GT+QV QNS L SFTSA SN+S NSN ISQP+
Sbjct: 421 TVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPL------- 473
Query: 480 SMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQ 539
GMSQGN GGQMVQ+GI MNQNMMSGLGPSG+SSGTGTMIPTPGMSQQ Q GM
Sbjct: 474 ----IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGMP 529
Query: 540 PLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
L VNNN A NM L QQTS A+ ++QSKYVKVWEG+LSGQRQGQPVFIT+LE
Sbjct: 530 SLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLE 581
>gi|224111730|ref|XP_002315956.1| predicted protein [Populus trichocarpa]
gi|222864996|gb|EEF02127.1| predicted protein [Populus trichocarpa]
Length = 796
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/595 (76%), Positives = 501/595 (84%), Gaps = 13/595 (2%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+EKQLIVAVEGTAAMGP+W IVSDYLEKIIR K S VELS+VTFN+H
Sbjct: 1 MAEKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRY---------KVPTSIVELSIVTFNSH 51
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
GSY ACLVQRSGWT+DVDIFL WLS IPFAGGGFNDAAIAEGLSEALMMF + PNGSQ Q
Sbjct: 52 GSYSACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPIDPNGSQTQ 111
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
N+D QR+CIL+AASNPHPLPTPVYRPQ+QNL+Q EN +AQ ESRLSDAETVAKSF QCS
Sbjct: 112 SNIDEQRNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCS 171
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
VSLS+ICPKQLPKL +IYNA KRN RAADPPVD+ KNPHFLVLISENFMEARAALS PGV
Sbjct: 172 VSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALSLPGV 231
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
+L NQ PVK+DIA VTSVTGPAPTSIPSVNG NRP ISVGNVPTATVKVEPST+TS
Sbjct: 232 TSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPSTITS 291
Query: 299 MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358
M NGPTFPH PSVPRPASQGVP LQTSSPS+T+Q+M TSGD V ++KP VS M+Q RP
Sbjct: 292 MANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKPNVSVMTQSARPG 351
Query: 359 APAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTS 418
PAAANV+ILNN+SQARQVMN+A L+GGTS+GL S+ QT +AMHMSNMISSGMASSVP +
Sbjct: 352 PPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSGMASSVPAA 411
Query: 419 QPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN-PSISQPMGTLQG 477
VFSS Q G++SI GSGTLTGT+Q+ NSGL SFTSA SN+SGNSN ISQPMG LQ
Sbjct: 412 PTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISQPMGNLQA 471
Query: 478 GASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQS 536
G S+GQS GMSQGN SG QMVQ+G+ N N MSGLGPSGVSSG TMIPTPGMSQQ QS
Sbjct: 472 GVSIGQSAPGMSQGNISGAQMVQSGMGANPNTMSGLGPSGVSSGLNTMIPTPGMSQQVQS 531
Query: 537 GMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
GMQPL NNN+A N+ +SQQT+ L QSKYVKVWEG+LSGQRQGQPVFIT+LE
Sbjct: 532 GMQPLGANNNSADNLSMSQQTAGGLQPPQSKYVKVWEGNLSGQRQGQPVFITRLE 586
>gi|255576521|ref|XP_002529152.1| conserved hypothetical protein [Ricinus communis]
gi|223531431|gb|EEF33265.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/525 (77%), Positives = 452/525 (86%), Gaps = 7/525 (1%)
Query: 71 SGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMM-FSVAPNGSQNQQNVDGQRHC 129
SGWT+DVDIFL WL+ IPFAGGGF+DAAIAEGLSEALMM F PNGSQ QQN+DGQRHC
Sbjct: 30 SGWTRDVDIFLQWLAAIPFAGGGFSDAAIAEGLSEALMMMFPFVPNGSQAQQNIDGQRHC 89
Query: 130 ILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPK 189
IL+AASNPHPLPTPVYR Q+QNL+QNEN + Q ESRLSDAET+AKSF QCSVSLSVICPK
Sbjct: 90 ILIAASNPHPLPTPVYRQQIQNLEQNENIDPQTESRLSDAETIAKSFPQCSVSLSVICPK 149
Query: 190 QLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANLAPNQNP 249
QLPKL AIYNA KRN RAADP VDN KNPHFLVLISENFMEARAALSRPGVANL NQ+P
Sbjct: 150 QLPKLRAIYNAGKRNSRAADPTVDNVKNPHFLVLISENFMEARAALSRPGVANLPSNQSP 209
Query: 250 VKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTSMVNGPTFPH 307
VKMD+A VTSV GP SIPSVNG ++RP S+GNVPTATVKVEP+TVTSM GP FPH
Sbjct: 210 VKMDVASVTSVAGPTSPSIPSVNGSIMSRP--SIGNVPTATVKVEPTTVTSMAPGPAFPH 267
Query: 308 IPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPAAANVNI 367
IPS RPASQ VPSLQTSSP +++QE+ITS ++V E+KP VSGM +RP+ P AANV+I
Sbjct: 268 IPST-RPASQSVPSLQTSSPPTSTQEIITSSENVSEIKPTVSGMPHSVRPVPPGAANVSI 326
Query: 368 LNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQPVFSSAQS 427
LNNLSQARQVMN+AALTGGTSIGL S+ QTP+AMHMSNMISSGMASSVP +Q VFSS Q+
Sbjct: 327 LNNLSQARQVMNSAALTGGTSIGLPSINQTPVAMHMSNMISSGMASSVPAAQTVFSSGQT 386
Query: 428 GITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASMGQSV-G 486
GITSI GSGTLTGT+Q+ NSGL SFTS +N+SGNSN +SQPMG LQ G SMGQSV G
Sbjct: 387 GITSITGSGTLTGTTQIAPNSGLGSFTSTTTNVSGNSNLGMSQPMGNLQAGVSMGQSVPG 446
Query: 487 MSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNN 546
MSQGN SG QMVQ+GI M+QNMMSGLGPS VSSG TMIPTPGM Q AQ+G+Q L VNNN
Sbjct: 447 MSQGNLSGAQMVQSGIGMSQNMMSGLGPSVVSSGASTMIPTPGMGQPAQTGIQSLGVNNN 506
Query: 547 TAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
+A NM LSQQT+SAL S+QSKYVKVWEG+LSGQRQGQPVFIT+LE
Sbjct: 507 SAANMPLSQQTASALQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 551
>gi|449434652|ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Cucumis sativus]
Length = 858
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/596 (68%), Positives = 483/596 (81%), Gaps = 15/596 (2%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M++KQLIV VEGTAAMGP+WQ++VSDY+EKI+R FC NEL GQK SNVE SLVTF+TH
Sbjct: 1 MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
GSYC CLVQR+GWT+DVDIF+ WLS IPF+GGGF+DAAIAEGL+EALMMF PNG QNQ
Sbjct: 61 GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
Q +D Q+HCILVAASNP+PLPTPVYRP +QNL+Q++N E S S AETVAKSF QC
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDNVE--PGSSQSYAETVAKSFPQCF 178
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
+SLSVICPKQLPKL AIY A KRNPRAADPP+DN K+P +LVLISENF+EARAALSRPG+
Sbjct: 179 ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
+L NQ+PVKMDI+ V VTGP PT+ PSVNG INR P+SV N PTATVKVEP+TVTS
Sbjct: 239 TSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTS 298
Query: 299 MVNGPTF-PHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRP 357
M NG + PH+PSV R ASQGVPSLQTSSP S SQEMIT+ ++ ++KPLV+G+ QP+R
Sbjct: 299 MTNGSGYPPHMPSVVRAASQGVPSLQTSSPLS-SQEMITNNENTQDLKPLVTGVPQPVRS 357
Query: 358 MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417
+ P ANV+ILNN+SQAR VM+ AAL GGTSIGL SMGQTP+AMH+SNMISSGM SSVP
Sbjct: 358 LGP--ANVSILNNISQAR-VMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPA 414
Query: 418 SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477
+Q VFSS QSG+TSI GS TL SQV NSG++S TS +N+SGN N + SQ +G LQG
Sbjct: 415 AQNVFSSGQSGMTSINGSSTL---SQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQG 471
Query: 478 GASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQS 536
S+ QSV G+SQGN +G Q+VQ+GI ++QN+MS L GVSSG GTMIPTPGM QQ Q+
Sbjct: 472 SVSVSQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQN 531
Query: 537 GMQPLSVNNNTAVNMQLSQQTSSAL-HSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
GM L + NN A NM L Q ++ AL +QSKYVK WEG+LSGQRQGQPVFIT++E
Sbjct: 532 GMHSLGM-NNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQPVFITRME 586
>gi|449519677|ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/596 (68%), Positives = 483/596 (81%), Gaps = 15/596 (2%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M++KQLIV VEGTAAMGP+WQ++VSDY+EKI+R FC NEL GQK SNVE SLVTF+TH
Sbjct: 1 MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
GSYC CLVQR+GWT+DVDIF+ WLS IPF+GGGF+DAAIAEGL+EALMMF PNG QNQ
Sbjct: 61 GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
Q +D Q+HCILVAASNP+PLPTPVYRP +QNL+Q++N E S S AETVAKSF QC
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDNVE--PGSSQSYAETVAKSFPQCF 178
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
+SLSVICPKQLPKL AIY A KRNPRAADPP+DN K+P +LVLISENF+EARAALSRPG+
Sbjct: 179 ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
+L NQ+PVKMDI+ V VTGP PT+ PSVNG INR P+SV N PTATVKVEP+TVTS
Sbjct: 239 TSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTS 298
Query: 299 MVNGPTF-PHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRP 357
M NG + PH+PSV R ASQGVPSLQTSSP S SQEMIT+ ++ ++KPLV+G+ QP+R
Sbjct: 299 MTNGSGYPPHMPSVVRAASQGVPSLQTSSPLS-SQEMITNNENTQDLKPLVTGVPQPVRS 357
Query: 358 MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417
+ P ANV+ILNN+SQAR VM+ AAL GGTSIGL SMGQTP+AMH+SNMISSGM SSVP
Sbjct: 358 LGP--ANVSILNNISQAR-VMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPA 414
Query: 418 SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477
+Q VFSS QSG+TSI GS TL SQV NSG++S TS +N+SGN N + SQ +G LQG
Sbjct: 415 AQNVFSSGQSGMTSINGSSTL---SQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQG 471
Query: 478 GASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQS 536
S+ QSV G+SQGN +G Q+VQ+GI ++QN+MS L GVSSG GTMIPTPGM QQ Q+
Sbjct: 472 SVSVSQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQN 531
Query: 537 GMQPLSVNNNTAVNMQLSQQTSSAL-HSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
GM L + NN A NM L Q ++ AL +QSKYVK WEG+LSGQRQGQPVFIT++E
Sbjct: 532 GMHSLGM-NNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQPVFITRME 586
>gi|356502460|ref|XP_003520037.1| PREDICTED: uncharacterized protein LOC100801664 [Glycine max]
Length = 879
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/593 (69%), Positives = 471/593 (79%), Gaps = 11/593 (1%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
KQLIVAVE TAAMGPYW +I+ DYL+K+IRCF N+ GQK SASNVE +LVT+NTHG Y
Sbjct: 6 KQLIVAVESTAAMGPYWNTILMDYLDKMIRCFGGNDSTGQKFSASNVEFALVTYNTHGCY 65
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
+CLVQRSGWT+D D+F WLS+IPF GGGFNDAAIAEGLSEALMM + +G+ NQQ+V
Sbjct: 66 SSCLVQRSGWTRDPDVFFSWLSSIPFNGGGFNDAAIAEGLSEALMMLWNSQSGAPNQQSV 125
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSL 183
D +HCILVAASNP+PL TPVY P+ QNL+Q+E ++ + S L DAE VAK+F Q S+SL
Sbjct: 126 DMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDSDSGSHLYDAEAVAKAFPQFSISL 185
Query: 184 SVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANL 243
SVICPKQLPK+ +IYNA KRN RAADPP++ +K PHFL+LISE F EAR ALSR G+ +L
Sbjct: 186 SVICPKQLPKIKSIYNAGKRNNRAADPPLE-AKTPHFLILISEGFREARGALSRSGITSL 244
Query: 244 APNQNPVKMDIAPVTSVTGPAPTSIPSVNGI--NRPPISVGNVPTATVKVEPSTVTSMVN 301
NQ+PVK+D VT VTG PTS+P VNG NR P+ GNV ATVKVEP VTSMV+
Sbjct: 245 PSNQSPVKVDAVSVTPVTGAPPTSMP-VNGSIPNRQPVPAGNVAPATVKVEPVPVTSMVS 303
Query: 302 GPTFPHIPSVPRP--ASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMA 359
GP FPH SVPR SQGVPSLQTSSPSS SQ++IT+ ++ + KP VS + PLRP+
Sbjct: 304 GPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVSML--PLRPVN 361
Query: 360 PAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQ 419
P ANVNILNNLSQARQVMN+AAL+GGTS+GL SMGQTP+AMHMSNMISSGM SSVP +Q
Sbjct: 362 PVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVPAAQ 421
Query: 420 PVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGA 479
VFSS QSGITS+ SG LT +QV QNSGL S TS SNLS +SN ISQP+G LQG
Sbjct: 422 NVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNLQGVV 481
Query: 480 SMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGM 538
S+GQ V GMSQGN SG QMVQ G+SMNQN+MSGLG S VSSGTGTMIPTPGMSQ QS M
Sbjct: 482 SIGQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPTPGMSQPVQSVM 541
Query: 539 QPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
QPL NN A NM LSQQTS + S+QSKYVKVWEGSLSGQRQGQPVFITKLE
Sbjct: 542 QPLV--NNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLE 592
>gi|312283021|dbj|BAJ34376.1| unnamed protein product [Thellungiella halophila]
Length = 852
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/593 (63%), Positives = 451/593 (76%), Gaps = 28/593 (4%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
KQLIV EGTAA+GPYW +IVSDYLEKIIR FC +EL G++ NVELSLV FN+HGSY
Sbjct: 6 KQLIVVAEGTAALGPYWHTIVSDYLEKIIRSFCGSELNGER----NVELSLVIFNSHGSY 61
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CACLVQRSGWTKDVDIFLHWLS+I FAGGGF++AA AEGL+EALMMFS P Q Q +
Sbjct: 62 CACLVQRSGWTKDVDIFLHWLSSIQFAGGGFSEAATAEGLAEALMMFS--PPSGQAQPSN 119
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSL 183
D +RHCIL+ ASNPH LPTPVYRP++ N ++NEN +AQ+ESRLSDAETVA F +CSVSL
Sbjct: 120 DLKRHCILITASNPHSLPTPVYRPKLPNAERNENGDAQSESRLSDAETVASYFSRCSVSL 179
Query: 184 SVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANL 243
SVICPKQLPK+ A+YNA K NP++ D +D KN +LVLI ENF+EARAALS NL
Sbjct: 180 SVICPKQLPKIRALYNAGKLNPQSPDLSIDTVKNTFYLVLIPENFVEARAALSH-SATNL 238
Query: 244 APNQNPVKMD---IAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
Q+PVK+D +AP VTG P +PS NG +NR P+S+G VPTATVKVEPSTV S
Sbjct: 239 PQTQSPVKVDRSTVAPSLPVTGQPPAPVPSANGPILNRQPVSIGPVPTATVKVEPSTVPS 298
Query: 299 MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358
M TFPHI SV RPA+Q +PS+QTSSPS SQEM+T+ ++ P+VKP+V+GM+ PLR
Sbjct: 299 MAAVSTFPHIQSVARPATQAIPSIQTSSPSPVSQEMVTNAENAPDVKPVVTGMTPPLRTG 358
Query: 359 APAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTS 418
P ANVN+LNNLSQ RQVM++AAL G S S GQ+ +AMHMSNMIS+GMA+S+P S
Sbjct: 359 PPGGANVNLLNNLSQVRQVMSSAALAGAAS----STGQSAVAMHMSNMISTGMATSLPPS 414
Query: 419 QPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGG 478
Q VFSS Q GITS+ GSG L GT Q Q+ G N+ S + + SN +SQPM
Sbjct: 415 QTVFSSGQQGITSMAGSGALMGTVQAGQSPGPNNSFSPQTTSNVASNLGVSQPM------ 468
Query: 479 ASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGM 538
GM+QG+HSG QM+Q GI MNQNMMSGLG VSSGTG M+PTPG+ QQAQSG+
Sbjct: 469 ------PGMNQGSHSGAQMMQGGIPMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSGI 522
Query: 539 QPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
Q L +N++A NMQLSQ +S+AL +SQSKYVKVWEG+LSGQRQGQPV IT+LE
Sbjct: 523 QQLGGSNSSAPNMQLSQPSSAALQTSQSKYVKVWEGNLSGQRQGQPVLITRLE 575
>gi|30689268|ref|NP_173925.3| phytochrome and flowering time regulatory protein 1 [Arabidopsis
thaliana]
gi|75145501|sp|Q7XYY2.1|MED25_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
25; Short=AtMED25; AltName: Full=Phytochrome and
flowering time 1 protein; AltName: Full=Phytochrome and
flowering time regulatory protein 1
gi|32478899|gb|AAO39425.1| phytochrome and flowering time 1 protein [Arabidopsis thaliana]
gi|332192518|gb|AEE30639.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis
thaliana]
Length = 836
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/594 (62%), Positives = 453/594 (76%), Gaps = 26/594 (4%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
KQLIV EGTAA+GPYWQ+IVSDYLEKIIR FC +EL G++ S VELSLV FN+HGSY
Sbjct: 6 KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CACLVQRSGWT+DVDIFLHWLS+I F GGGFN+ A AEGL+EALMMFS P Q Q +
Sbjct: 66 CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFS--PPSGQAQPSN 123
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSL 183
D +RHCIL+ ASNPH LPTPVYRP++QN+++NEN +AQAESRLSDAETVA F +CSVSL
Sbjct: 124 DLKRHCILITASNPHILPTPVYRPRLQNVERNENGDAQAESRLSDAETVASYFAKCSVSL 183
Query: 184 SVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANL 243
SV+CPKQLP + A+YNA K N ++AD +D +KN +LVLISENF+EA AALS NL
Sbjct: 184 SVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSH-SATNL 242
Query: 244 APNQNPVKMD---IAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
Q+PVK+D +AP VTG P + S NG NR P+SVG VPTATVKVEPSTVTS
Sbjct: 243 PQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVGPVPTATVKVEPSTVTS 302
Query: 299 MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP-LVSGMSQPLRP 357
M P+FPHIP+V RPA+Q +PS+QTSS S SQ+M+++ ++ P++KP +VSGM+ PLR
Sbjct: 303 MAPVPSFPHIPAVARPATQAIPSIQTSSASPVSQDMVSNAENAPDIKPVVVSGMTPPLRT 362
Query: 358 MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417
P ANVN+LNNLSQ RQVM++AAL G S S+GQ+ +AMHMSNMIS+GMA+S+P
Sbjct: 363 GPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAMHMSNMISTGMATSLPP 418
Query: 418 SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477
SQ VFS+ Q GITS+ GSG L G++Q Q+ G N+ S + + SN +SQPM
Sbjct: 419 SQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTSNVASNLGVSQPMQ---- 474
Query: 478 GASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSG 537
GM+QG+HSG M+Q GISMNQNMMSGLG VSSGTG M+PTPG+ QQAQSG
Sbjct: 475 --------GMNQGSHSGA-MMQGGISMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSG 525
Query: 538 MQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
+Q L +N++A NMQLSQ +S A+ +SQSKYVKVWEG+LSGQRQGQPV IT+LE
Sbjct: 526 IQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQPVLITRLE 579
>gi|297845606|ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arabidopsis lyrata subsp.
lyrata]
gi|297336526|gb|EFH66943.1| hypothetical protein ARALYDRAFT_472815 [Arabidopsis lyrata subsp.
lyrata]
Length = 832
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/594 (62%), Positives = 451/594 (75%), Gaps = 26/594 (4%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
KQLIV EGTAA+GPYWQ+IVSDYLEKIIR FC +EL G++ S VELSLV FN+HGSY
Sbjct: 6 KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CACLVQRSGWT+DVDIFLHWLS+I F GGGFN+ A AEGL+EALMMFS P Q Q +
Sbjct: 66 CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFS--PPSGQAQPSN 123
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSL 183
D +RHCIL+ ASNPH LPTPV+RP++Q++++NEN +AQAESRLSDAETVA F +CSVSL
Sbjct: 124 DLKRHCILITASNPHTLPTPVFRPRLQSVERNENGDAQAESRLSDAETVASYFAKCSVSL 183
Query: 184 SVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANL 243
SV+CPKQLPK+ A+YNA K NP++AD +D +KN +LVLISENF+EARAALS NL
Sbjct: 184 SVVCPKQLPKIRALYNAGKLNPQSADLSIDTAKNTFYLVLISENFVEARAALSH-SATNL 242
Query: 244 APNQNPVKMD---IAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298
Q+PVK+D +AP VTG P + S NG NR P+SVG VPTATVKVEPSTVTS
Sbjct: 243 PQTQSPVKVDRATVAPSLPVTGQPPAPVTSANGPIQNRQPVSVGPVPTATVKVEPSTVTS 302
Query: 299 MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKP-LVSGMSQPLRP 357
M P FPHIPSV RPA+Q +PS+QTSS S SQ+M+T+ ++ P++KP +V GM+ PLR
Sbjct: 303 MAPVPNFPHIPSVARPATQPIPSIQTSSASPVSQDMVTNAENAPDIKPVVVGGMTPPLRT 362
Query: 358 MAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417
P ANVN+LNNLSQ RQVM++AAL G S QS +AMHMSNMIS+GMA+S+P
Sbjct: 363 GPPGGANVNLLNNLSQVRQVMSSAALAGAASSAGQSA----VAMHMSNMISTGMATSLPP 418
Query: 418 SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477
SQ VFS+ Q GITS+ GSG L G++Q Q+ G N+ S + + SN +SQPM
Sbjct: 419 SQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTPNVASNLGVSQPMQ---- 474
Query: 478 GASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSG 537
GM+QG+HSG M+Q GISMNQN++SGLG VSSGTG M+PTPG+ QQAQSG
Sbjct: 475 --------GMNQGSHSGA-MMQGGISMNQNIVSGLGQGNVSSGTGGMMPTPGVGQQAQSG 525
Query: 538 MQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
+Q L +N++A NMQLSQ +S AL +SQSKYVKVWEG+LSGQRQGQPV IT+LE
Sbjct: 526 IQQLGGSNSSAPNMQLSQPSSGALQTSQSKYVKVWEGNLSGQRQGQPVLITRLE 579
>gi|123979422|gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticum aestivum]
Length = 759
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/592 (54%), Positives = 410/592 (69%), Gaps = 32/592 (5%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
SE+QL+V VEGTAA+GPYW +I ++Y+EKI+R FC EL+GQK + EL+LV F+THG
Sbjct: 7 SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A +VQRSGWTKD+D FL WLS I F+GGGF++AAI EGL+EALM+ + + SQN Q
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSSSSSQNHQ 126
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
N + Q+HC+LVAASNP+PLPTPVYRP +Q+ D ++NEA ES L+DAE VA SF QCSV
Sbjct: 127 NRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAEAVAVSFAQCSV 186
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSV+ PKQLP L AIYNA KRNP+A+DP VD++KNPHFLVL+SE+FMEAR ALS P
Sbjct: 187 SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPG 246
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVN 301
NL PN KMD P +V GP + PSVNG +G PTA VKVEP+T+ MV+
Sbjct: 247 NLVPNHTITKMDTTPAATVPGPPSNASPSVNG-----TMMGRQPTANVKVEPTTIPPMVS 301
Query: 302 GPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPA 361
P F H+ + ASQGV ++QTSSPS SQE + + + E KPLV+ + Q +RP P
Sbjct: 302 APAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGP- 360
Query: 362 AANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQPV 421
ANV+ILNNLSQ R +LT TS+G +MG TP+ +HMSNMISSGM TS P
Sbjct: 361 -ANVSILNNLSQHRH-----SLTAATSMG-PNMGATPIQVHMSNMISSGM-----TSTPA 408
Query: 422 FSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASM 481
I+SI G+ G Q+ QN+ L SF S S +S NSN ++S + +Q +M
Sbjct: 409 V------ISSISGTVQPIGAQQLAQNTALGSFGSNTSTVSCNSNIAVSSSLANIQSNMAM 462
Query: 482 GQSV-GMSQGN-HSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQ 539
GQSV M+QG +G Q Q GI NQNM++ LG + ++S T TM+PTPGM Q Q+G+
Sbjct: 463 GQSVPSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAINS-TPTMMPTPGMVQ--QTGVN 519
Query: 540 PLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
LS NN++A+NM L+Q + SKYVK+WEG+LSGQRQGQPVFI KLE
Sbjct: 520 ALSANNSSAMNMPLAQHPNG---QQPSKYVKIWEGTLSGQRQGQPVFICKLE 568
>gi|414589304|tpg|DAA39875.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea mays]
Length = 915
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/593 (55%), Positives = 412/593 (69%), Gaps = 28/593 (4%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
+++QL+VAVEGTAA+GPYW +IV++Y+EKI+R FC +EL GQK + EL+LV F+THG
Sbjct: 4 ADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFHTHG 63
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A VQRSGWTKDVD FL WLS I F+GGGF++A+ EGL+EAL + PN +Q Q
Sbjct: 64 PYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPNTTQGHQ 123
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
N + Q+HCILVAASNP+PLPTPVY Q+ D EN E E ++DAETVAKSF QCSV
Sbjct: 124 NHEAQKHCILVAASNPYPLPTPVYCLPTQSTDHKENIETSKEPSIADAETVAKSFAQCSV 183
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSVI PKQLP L AIYNA KRN RAADP VD++KNPHFLVL+SENFMEAR ALSRP
Sbjct: 184 SLSVISPKQLPTLKAIYNAGKRNLRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 243
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVN 301
NLAPNQ KMD AP +VT P PTS + N R PI VG + T +VKVEP+T+ +V+
Sbjct: 244 NLAPNQTITKMDTAP--AVTMPGPTS--NGNSSGRQPI-VGGISTTSVKVEPTTMPPIVS 298
Query: 302 GPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPA 361
P F H+ + ASQG+ +LQTSSPS SQE D+V E KP+++ + QP+RP
Sbjct: 299 APAFSHVTPISNVASQGISALQTSSPSLISQEANMGNDNVQEHKPIINPVQQPIRP---- 354
Query: 362 AANVNILNNLSQARQVMNNAALTGG-TSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQP 420
+ ++LNNLSQ R +MN+ +L GG TS+GL +MG TP+ +HMSNMISSGM TS P
Sbjct: 355 GGHGSLLNNLSQVR-LMNSTSLGGGATSMGLPNMGATPIQVHMSNMISSGM-----TSTP 408
Query: 421 VFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGAS 480
S I+S+ G G T Q+ Q++ L SF S ++GNS ++S + Q
Sbjct: 409 ------SVISSMSGPGQPISTQQMVQSTALGSFGSNTPTVTGNSTIAVSSSLTNNQSSMG 462
Query: 481 MGQSV-GMSQGNH-SGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGM 538
MGQSV ++QG SG Q+ Q GI NQN+MS LGP+ +SS T M+PTPGM Q+G+
Sbjct: 463 MGQSVQSVAQGGLVSGSQLGQGGIVANQNVMSTLGPTAISS-TPAMMPTPGMV--PQTGV 519
Query: 539 QPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
L VNNN+A+NM ++QQ ++A KYVK+WEG+LSGQRQGQPV I KLE
Sbjct: 520 NSLGVNNNSAMNMPITQQHANA-QQPPPKYVKIWEGTLSGQRQGQPVIICKLE 571
>gi|414589303|tpg|DAA39874.1| TPA: hypothetical protein ZEAMMB73_491348 [Zea mays]
Length = 880
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/593 (55%), Positives = 412/593 (69%), Gaps = 28/593 (4%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
+++QL+VAVEGTAA+GPYW +IV++Y+EKI+R FC +EL GQK + EL+LV F+THG
Sbjct: 4 ADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFHTHG 63
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A VQRSGWTKDVD FL WLS I F+GGGF++A+ EGL+EAL + PN +Q Q
Sbjct: 64 PYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPNTTQGHQ 123
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
N + Q+HCILVAASNP+PLPTPVY Q+ D EN E E ++DAETVAKSF QCSV
Sbjct: 124 NHEAQKHCILVAASNPYPLPTPVYCLPTQSTDHKENIETSKEPSIADAETVAKSFAQCSV 183
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSVI PKQLP L AIYNA KRN RAADP VD++KNPHFLVL+SENFMEAR ALSRP
Sbjct: 184 SLSVISPKQLPTLKAIYNAGKRNLRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 243
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVN 301
NLAPNQ KMD AP +VT P PTS + N R PI VG + T +VKVEP+T+ +V+
Sbjct: 244 NLAPNQTITKMDTAP--AVTMPGPTS--NGNSSGRQPI-VGGISTTSVKVEPTTMPPIVS 298
Query: 302 GPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPA 361
P F H+ + ASQG+ +LQTSSPS SQE D+V E KP+++ + QP+RP
Sbjct: 299 APAFSHVTPISNVASQGISALQTSSPSLISQEANMGNDNVQEHKPIINPVQQPIRP---- 354
Query: 362 AANVNILNNLSQARQVMNNAALTGG-TSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQP 420
+ ++LNNLSQ R +MN+ +L GG TS+GL +MG TP+ +HMSNMISSGM TS P
Sbjct: 355 GGHGSLLNNLSQVR-LMNSTSLGGGATSMGLPNMGATPIQVHMSNMISSGM-----TSTP 408
Query: 421 VFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGAS 480
S I+S+ G G T Q+ Q++ L SF S ++GNS ++S + Q
Sbjct: 409 ------SVISSMSGPGQPISTQQMVQSTALGSFGSNTPTVTGNSTIAVSSSLTNNQSSMG 462
Query: 481 MGQSV-GMSQGNH-SGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGM 538
MGQSV ++QG SG Q+ Q GI NQN+MS LGP+ +SS T M+PTPGM Q+G+
Sbjct: 463 MGQSVQSVAQGGLVSGSQLGQGGIVANQNVMSTLGPTAISS-TPAMMPTPGMV--PQTGV 519
Query: 539 QPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
L VNNN+A+NM ++QQ ++A KYVK+WEG+LSGQRQGQPV I KLE
Sbjct: 520 NSLGVNNNSAMNMPITQQHANA-QQPPPKYVKIWEGTLSGQRQGQPVIICKLE 571
>gi|357157969|ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
distachyon]
Length = 771
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 321/596 (53%), Positives = 410/596 (68%), Gaps = 37/596 (6%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
+E+QL+V VEGTAA+GPYW +I ++Y+EKI+R FC +L+GQK + EL+LV F+THG
Sbjct: 7 AERQLVVVVEGTAALGPYWHTIAAEYVEKIVRSFCAAQLSGQKLAGVPPELALVVFHTHG 66
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A +VQRSGWTKD+D FL WLS I F+GGGF++AAI EGL+EALM+ +P+ +QN Q
Sbjct: 67 PYSAFVVQRSGWTKDMDTFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPSNNQNHQ 126
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
N + Q+HC+LVAASNP+PLPTPVYRP +Q+ D +NNE ES L+DAE VA SF QC V
Sbjct: 127 NHELQKHCVLVAASNPYPLPTPVYRPFVQSGDHKKNNEVTKESCLADAEAVAISFSQCCV 186
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSV+ PKQLP L AIYNA KRNP+A+DP VD+ KNPHFLVL+SE+FMEAR ALS P
Sbjct: 187 SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHVKNPHFLVLLSESFMEARTALSHPSPG 246
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVTSMVN 301
NL PNQ KMDIAP +V GP + PSVNG +G PTA +KVEP+ +T MV+
Sbjct: 247 NLVPNQIITKMDIAPAATVPGPTSNANPSVNG-----SMMGRQPTANIKVEPTIITPMVS 301
Query: 302 GPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPA 361
P F H+ + SQGV +LQ+SSPS SQE + + + E KPLV+ + Q +RP P
Sbjct: 302 APAFSHMTPISNVTSQGVSALQSSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGP- 360
Query: 362 AANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQPV 421
ANV+ILNNLSQ R +L+G TS+G +MG TP+ +HMSNMISSGM TS P
Sbjct: 361 -ANVSILNNLSQHRH-----SLSGATSMG-PNMGATPIQVHMSNMISSGM-----TSTP- 407
Query: 422 FSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASM 481
S I+S+ G+ TG Q+ QN+ L SF S S +SGNSN ++S + +Q +
Sbjct: 408 -----SVISSMSGTVQPTGAQQLVQNTALGSFGSNNSTVSGNSNVAVSSSLANIQNNIAT 462
Query: 482 GQSV------GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQ 535
QSV G+ G+H + NQNM+S LGP+ +SS M+PTPGM+QQA
Sbjct: 463 AQSVPPMAQGGLMSGSHGSQSGQGGIGT-NQNMISSLGPTAISSAPA-MMPTPGMTQQA- 519
Query: 536 SGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
G+ LSVNN++A+NM + QQ + QSKYVK+WEG+LSGQRQGQPVFI KLE
Sbjct: 520 -GVNSLSVNNSSAMNMPMPQQPNG---QQQSKYVKIWEGTLSGQRQGQPVFICKLE 571
>gi|51091708|dbj|BAD36509.1| putative SMA-9 class B [Oryza sativa Japonica Group]
gi|215769266|dbj|BAH01495.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 301/602 (50%), Positives = 383/602 (63%), Gaps = 68/602 (11%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
+E+QL+VAVEGTAA+GPYW V+DY+EKI+R FC +E+AGQK + + EL+LV F+THG
Sbjct: 6 AERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHG 65
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A VQRSGWTKD+++FL WLS I F+GGGF++AAI+EGL+EALM+ + + SQN Q
Sbjct: 66 PYSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQ 125
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+ + Q+HCILVAASNP+PLPTPVYRP +Q+ D ENN+ ES L+DAETVAKSF QCSV
Sbjct: 126 SHEVQKHCILVAASNPYPLPTPVYRPLVQSSDHKENNDGAKESCLADAETVAKSFAQCSV 185
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSV+ PKQLP L AIYNAAKRNPRAADP VD++KNPHFLVL+S+NF+EAR ALSRP
Sbjct: 186 SLSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRPLPG 245
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTSM 299
NL N KMD A TSV P PSVNG + R P V A +K EP+T+ M
Sbjct: 246 NLVTNHPITKMDTA-ATSVPVPTSNGNPSVNGPMLTRQPNGV----VANIKTEPTTLPPM 300
Query: 300 VNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMA 359
V+ P F H+ V SQG+ S+Q+ SPS SQE + DSV E KPL++ + Q +RP
Sbjct: 301 VSAPAFSHVTPVANGVSQGLSSVQSPSPSLISQETNLANDSVQEHKPLINPIQQSIRPGG 360
Query: 360 PAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQ 419
P ANV+ILNNLSQ R V + +IS GM +P S
Sbjct: 361 P--ANVSILNNLSQHRSV--------------------------ATIISGGMP-GIPMS- 390
Query: 420 PVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGA 479
G+G G+ QV QN+ S T ++GNSN ++S +G +Q
Sbjct: 391 --------------GTGQSIGSQQVVQNTAFGSNTP----ITGNSNIAVSSSLGGIQSNI 432
Query: 480 SMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQ 539
+ G+ Q+ Q GI+ NQNM+S LG + VSS M+PTPGM+QQA G+
Sbjct: 433 GISGPPVTQGGSMGSTQLGQGGINTNQNMISSLGTTTVSSAP-AMMPTPGMAQQA--GVN 489
Query: 540 PLSVNNNTAVNMQLSQQTSSALHSSQS----------KYVKVWEGSLSGQRQGQPVFITK 589
L V N++A+NM + Q ++ Q KYVK+WEG+LSGQRQGQPVFI K
Sbjct: 490 SLGVTNSSAMNMPIVQHPNAQQQQQQQQQQQQQQPPPKYVKIWEGTLSGQRQGQPVFICK 549
Query: 590 LE 591
LE
Sbjct: 550 LE 551
>gi|222641283|gb|EEE69415.1| hypothetical protein OsJ_28785 [Oryza sativa Japonica Group]
Length = 839
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 301/602 (50%), Positives = 383/602 (63%), Gaps = 68/602 (11%)
Query: 2 SEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHG 61
+E+QL+VAVEGTAA+GPYW V+DY+EKI+R FC +E+AGQK + + EL+LV F+THG
Sbjct: 6 AERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHG 65
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
Y A VQRSGWTKD+++FL WLS I F+GGGF++AAI+EGL+EALM+ + + SQN Q
Sbjct: 66 PYSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQ 125
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+ + Q+HCILVAASNP+PLPTPVYRP +Q+ D ENN+ ES L+DAETVAKSF QCSV
Sbjct: 126 SHEVQKHCILVAASNPYPLPTPVYRPLVQSSDHKENNDGAKESCLADAETVAKSFAQCSV 185
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
SLSV+ PKQLP L AIYNAAKRNPRAADP VD++KNPHFLVL+S+NF+EAR ALSRP
Sbjct: 186 SLSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRPLPG 245
Query: 242 NLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTSM 299
NL N KMD A TSV P PSVNG + R P V A +K EP+T+ M
Sbjct: 246 NLVTNHPITKMDTA-ATSVPVPTSNGNPSVNGPMLTRQPNGV----VANIKTEPTTLPPM 300
Query: 300 VNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMA 359
V+ P F H+ V SQG+ S+Q+ SPS SQE + DSV E KPL++ + Q +RP
Sbjct: 301 VSAPAFSHVTPVANGVSQGLSSVQSPSPSLISQETNLANDSVQEHKPLINPIQQSIRPGG 360
Query: 360 PAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQ 419
P ANV+ILNNLSQ R V + +IS GM +P S
Sbjct: 361 P--ANVSILNNLSQHRSV--------------------------ATIISGGMP-GIPMS- 390
Query: 420 PVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGA 479
G+G G+ QV QN+ S T ++GNSN ++S +G +Q
Sbjct: 391 --------------GTGQSIGSQQVVQNTAFGSNTP----ITGNSNIAVSSSLGGIQSNI 432
Query: 480 SMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQ 539
+ G+ Q+ Q GI+ NQNM+S LG + VSS M+PTPGM+QQA G+
Sbjct: 433 GISGPPVTQGGSMGSTQLGQGGINTNQNMISSLGTTTVSSAP-AMMPTPGMAQQA--GVN 489
Query: 540 PLSVNNNTAVNMQLSQQTSSALHSSQS----------KYVKVWEGSLSGQRQGQPVFITK 589
L V N++A+NM + Q ++ Q KYVK+WEG+LSGQRQGQPVFI K
Sbjct: 490 SLGVTNSSAMNMPIVQHPNAQQQQQQQQQQQQQQPPPKYVKIWEGTLSGQRQGQPVFICK 549
Query: 590 LE 591
LE
Sbjct: 550 LE 551
>gi|218201884|gb|EEC84311.1| hypothetical protein OsI_30806 [Oryza sativa Indica Group]
Length = 959
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 301/603 (49%), Positives = 382/603 (63%), Gaps = 70/603 (11%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS 62
E+QL+VAVEGTAA+GPYW V+DY+EKI+R FC +E+AGQK + + EL+LV F+THG
Sbjct: 106 ERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHGP 165
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQN 122
Y A VQRSGWTKD+++FL WLS I F+GGGF++AAI+EGL+EALM+ + + SQN Q+
Sbjct: 166 YSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQS 225
Query: 123 VDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVS 182
+ Q+HCILVAASNP+PLPTPVYRP +Q+ D ENN+ ES L+DAETVAKSF QCSVS
Sbjct: 226 HEVQKHCILVAASNPYPLPTPVYRPLVQSSDHKENNDGAKESCLADAETVAKSFAQCSVS 285
Query: 183 LSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVAN 242
LSV+ PKQLP L AIYNAAKRNPRAADP VD++KNPHFLVL+S+NF+EAR ALSRP N
Sbjct: 286 LSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRPLPGN 345
Query: 243 LAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTSMV 300
L N KMD A TSV P PSVNG + R P V A +K EP+T+ MV
Sbjct: 346 LVTNHPITKMDTA-ATSVPVPTSNGNPSVNGPMLTRQPNGV----VANIKTEPTTLPPMV 400
Query: 301 NGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAP 360
+ P F H+ V SQG+ S+Q+ SPS SQE + DSV E KPL++ + Q +RP P
Sbjct: 401 SAPAFSHVTPVANGVSQGLSSVQSPSPSLISQETNLANDSVQEHKPLINPIQQSIRPGGP 460
Query: 361 AAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQP 420
ANV+ILNNLSQ R V + +IS GM +P S
Sbjct: 461 --ANVSILNNLSQHRSV--------------------------ATIISGGMP-GIPMS-- 489
Query: 421 VFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGAS 480
G+G G+ QV QN+ S T ++GNSN ++S +G +Q
Sbjct: 490 -------------GTGQSIGSQQVVQNTAFGSNTP----ITGNSNIAVSSSLGGIQSNIG 532
Query: 481 MGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQP 540
+ G+ Q+ Q GI+ NQNM+S LG + VSS M+PTPGM+QQA G+
Sbjct: 533 ISGPPVTQGGSMGSTQLGQGGINTNQNMISSLGTTTVSSAP-AMMPTPGMAQQA--GVNS 589
Query: 541 LSVNNNTAVNMQLSQQTSSALHSSQS------------KYVKVWEGSLSGQRQGQPVFIT 588
L V N++A+NM + Q ++ Q KYVK+WEG+LSGQRQGQPVFI
Sbjct: 590 LGVTNSSAMNMPIVQHPNAQQQQQQQQQQQQQQQQPPPKYVKIWEGTLSGQRQGQPVFIC 649
Query: 589 KLE 591
KLE
Sbjct: 650 KLE 652
>gi|145324014|ref|NP_001077596.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis
thaliana]
gi|332192519|gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis
thaliana]
Length = 727
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 292/490 (59%), Positives = 363/490 (74%), Gaps = 26/490 (5%)
Query: 108 MMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLS 167
MMFS P Q Q + D +RHCIL+ ASNPH LPTPVYRP++QN+++NEN +AQAESRLS
Sbjct: 1 MMFS--PPSGQAQPSNDLKRHCILITASNPHILPTPVYRPRLQNVERNENGDAQAESRLS 58
Query: 168 DAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISEN 227
DAETVA F +CSVSLSV+CPKQLP + A+YNA K N ++AD +D +KN +LVLISEN
Sbjct: 59 DAETVASYFAKCSVSLSVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISEN 118
Query: 228 FMEARAALSRPGVANLAPNQNPVKMD---IAPVTSVTGPAPTSIPSVNG--INRPPISVG 282
F+EA AALS NL Q+PVK+D +AP VTG P + S NG NR P+SVG
Sbjct: 119 FVEACAALSH-SATNLPQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVG 177
Query: 283 NVPTATVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVP 342
VPTATVKVEPSTVTSM P+FPHIP+V RPA+Q +PS+QTSS S SQ+M+++ ++ P
Sbjct: 178 PVPTATVKVEPSTVTSMAPVPSFPHIPAVARPATQAIPSIQTSSASPVSQDMVSNAENAP 237
Query: 343 EVKP-LVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAM 401
++KP +VSGM+ PLR P ANVN+LNNLSQ RQVM++AAL G S S+GQ+ +AM
Sbjct: 238 DIKPVVVSGMTPPLRTGPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAM 293
Query: 402 HMSNMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLS 461
HMSNMIS+GMA+S+P SQ VFS+ Q GITS+ GSG L G++Q Q+ G N+ S + +
Sbjct: 294 HMSNMISTGMATSLPPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTSN 353
Query: 462 GNSNPSISQPMGTLQGGASMGQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGT 521
SN +SQPM GM+QG+HSG M+Q GISMNQNMMSGLG VSSGT
Sbjct: 354 VASNLGVSQPMQ------------GMNQGSHSGA-MMQGGISMNQNMMSGLGQGNVSSGT 400
Query: 522 GTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQ 581
G M+PTPG+ QQAQSG+Q L +N++A NMQLSQ +S A+ +SQSKYVKVWEG+LSGQRQ
Sbjct: 401 GGMMPTPGVGQQAQSGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQ 460
Query: 582 GQPVFITKLE 591
GQPV IT+LE
Sbjct: 461 GQPVLITRLE 470
>gi|356498316|ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max]
Length = 3007
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/320 (71%), Positives = 253/320 (79%), Gaps = 7/320 (2%)
Query: 275 NRPPISVGNVPTATVKVEPSTVTSMVNGPTFPHIPSVPRPAS--QGVPSLQTSSPSSTSQ 332
NR P+ GNV ATVKVEP V SMV+GP FPH SVPR S QGVPSLQTSS SS SQ
Sbjct: 2450 NRQPVPAGNVAPATVKVEPVLVASMVSGPAFPHNSSVPRATSTSQGVPSLQTSSLSSVSQ 2509
Query: 333 EMITSGDSVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQ 392
++IT+ ++ + KP VS + PLRP+ PA ANVNILNNLS ARQVMN+AAL+GGTS+GL
Sbjct: 2510 DIITNNENAQDTKPTVSML--PLRPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLP 2567
Query: 393 SMGQTPMAMHMSNMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNS 452
SM QTP+AMHMSNMISSGM SSVP +Q VFSS QSGITS+ SG LTG +QV QNSGL S
Sbjct: 2568 SMSQTPVAMHMSNMISSGMTSSVPAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGS 2627
Query: 453 FTSAPSNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSG 511
TS SNLS +SN ISQP+G LQG SMGQ V GMSQGN SG QMVQ G++MNQN+MSG
Sbjct: 2628 LTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVMSG 2687
Query: 512 LGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKV 571
LG S VSSGTGTMIPTPGMSQ QSGMQPL NN A NM LSQQTS + S+QSKYVKV
Sbjct: 2688 LGQSVVSSGTGTMIPTPGMSQPVQSGMQPLV--NNAATNMPLSQQTSGGMQSAQSKYVKV 2745
Query: 572 WEGSLSGQRQGQPVFITKLE 591
WEGSLSGQRQGQPVFITKLE
Sbjct: 2746 WEGSLSGQRQGQPVFITKLE 2765
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 164/200 (82%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+EKQLIVAVE TAAMGPYW +I+ DYL+K+IRCF N+ GQK+SAS VE +LVT+NTH
Sbjct: 1 MAEKQLIVAVESTAAMGPYWDTILMDYLDKMIRCFGGNDSTGQKSSASIVEFALVTYNTH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
G Y +CLVQRSGWT+D D+F WLS+IPF GGGFNDAAIAEGLSEALMM ++ +G+ NQ
Sbjct: 61 GCYSSCLVQRSGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMLWISQSGAPNQ 120
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
Q+VD +HCILVAASNP+PL TPVY P+ QNL+Q+E + + S L DAE VAK+F Q S
Sbjct: 121 QSVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDLDSGSHLYDAEAVAKAFPQFS 180
Query: 181 VSLSVICPKQLPKLTAIYNA 200
+SLSVICPKQLPK+ IYNA
Sbjct: 181 ISLSVICPKQLPKIKTIYNA 200
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 201 AKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVANLAPNQNPVKMDIAPVTSV 260
KRN RAAD P++ +K PHFL+LISE F EA ALSR G+ +L NQ+PVK+D VT V
Sbjct: 1009 GKRNNRAADSPLE-AKTPHFLILISEGFREAWGALSRSGITSLPSNQSPVKVDAVSVTPV 1067
Query: 261 TGPAPTSIPSVNGINR 276
T PTS+P R
Sbjct: 1068 TEAPPTSMPERESRER 1083
>gi|224099341|ref|XP_002311445.1| predicted protein [Populus trichocarpa]
gi|222851265|gb|EEE88812.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/300 (67%), Positives = 234/300 (78%), Gaps = 7/300 (2%)
Query: 299 MVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358
M NG FPHI SVPRP+SQGVPS+QTSSPS+T+Q+M T+G++ ++KP VS +Q R
Sbjct: 1 MANGSAFPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQSARSA 60
Query: 359 APAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTS 418
PAAANVNILNNLSQARQVMN+AAL+GGTSIGL S+ QT +AMHMS+MISSGM SSVP +
Sbjct: 61 PPAAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSSVPAA 120
Query: 419 QPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN-PSISQPMGTLQG 477
Q VFSS Q G++SI GSG LTGT+Q+ NSGL SFTSA SN+ GNSN ISQPMG L
Sbjct: 121 QTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGNLHA 180
Query: 478 GASMGQSVGMSQGNH------SGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMS 531
G S+ QS G + SG QMVQ+G+ N N MSGLG SGVSSG+ TMIPTPGMS
Sbjct: 181 GVSISQSAMSGLGTNPNTMSGSGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPTPGMS 240
Query: 532 QQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
QQ QSGMQPL NNN+A N+ LSQQT+ L +QSKYVKVWEG+LSGQRQGQPVFIT+LE
Sbjct: 241 QQVQSGMQPLGANNNSAANLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFITRLE 300
>gi|356502462|ref|XP_003520038.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 266
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/235 (63%), Positives = 186/235 (79%), Gaps = 2/235 (0%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+ K+LIV VE TAAMGPYW++I+ DYL+KIIRCF N+ Q S SNVE +LV++NTH
Sbjct: 1 MAAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGENDSTVQ-NSCSNVEFALVSYNTH 59
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120
G Y CLVQR+GWT+D D+F WLS+IPF+GGGFNDA IAEGL+EAL+MF + +G NQ
Sbjct: 60 GCYSGCLVQRTGWTRDPDVFFMWLSSIPFSGGGFNDAVIAEGLAEALVMFPNSQSGDPNQ 119
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
QNVD +HCILVAASNP+PL TP+Y PQ+QNL+Q+E ++ +RL DAE VAK+F Q S
Sbjct: 120 QNVDMHQHCILVAASNPYPLQTPIYVPQLQNLEQSETIDSFPGNRLYDAEAVAKAFPQFS 179
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAAL 235
+SLSVICPK+LPK+ IYNA RN +AADPPV +K PHFL+LISE F EA+ AL
Sbjct: 180 ISLSVICPKELPKIKGIYNAGNRNSKAADPPV-LAKTPHFLILISEGFREAQGAL 233
>gi|12321507|gb|AAG50810.1|AC079281_12 hypothetical protein [Arabidopsis thaliana]
Length = 534
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 303 PTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLV-SGMSQPLRPMAPA 361
P+FPHIP+V RPA+Q +PS+QTSS S SQ+M+++ ++ P++KP+V SGM+ PLR P
Sbjct: 5 PSFPHIPAVARPATQAIPSIQTSSASPVSQDMVSNAENAPDIKPVVVSGMTPPLRTGPPG 64
Query: 362 AANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQPV 421
ANVN+LNNLSQ RQVM++AAL G S S+GQ+ +AMHMSNMIS+GMA+S+P SQ V
Sbjct: 65 GANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAMHMSNMISTGMATSLPPSQTV 120
Query: 422 FSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASM 481
FS+ Q GITS+ GSG L G++Q Q+ G N+ S + + SN +SQPM
Sbjct: 121 FSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFSPQTTSNVASNLGVSQPM--------- 171
Query: 482 GQSVGMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPL 541
GM+QG+HSG M+Q GISMNQNMMSGLG VSSGTG M+PTPG+ QQAQSG+Q L
Sbjct: 172 ---QGMNQGSHSGA-MMQGGISMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQSGIQQL 227
Query: 542 SVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
+N++A NMQLSQ +S A+ +SQSKYVKVWEG+LSGQRQGQPV IT+LE
Sbjct: 228 GGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQPVLITRLE 277
>gi|302771325|ref|XP_002969081.1| hypothetical protein SELMODRAFT_440592 [Selaginella moellendorffii]
gi|300163586|gb|EFJ30197.1| hypothetical protein SELMODRAFT_440592 [Selaginella moellendorffii]
Length = 1048
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 333/626 (53%), Gaps = 87/626 (13%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
+ L++AVE TAA+GP W + S+YL+KI R F + QK + + +E++LV F H SY
Sbjct: 24 QYLVLAVEATAALGPSWPLLRSEYLDKIARAFYGQDGNVQKDNGATLEMALVVFRGHDSY 83
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CL+QRSGWT +++F WLS+I F+GGGF + A+AEGL+EAL+M P +Q N
Sbjct: 84 SGCLLQRSGWTPSLELFQLWLSSIDFSGGGFGEVAVAEGLAEALVM--CCPT-TQPPSNQ 140
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSL 183
QRHCILVAASNPH L TPV P + + + L+DAE VA++F QC +SL
Sbjct: 141 ACQRHCILVAASNPHRLQTPVPHPPLSTGADAKPDHWW----LADAEAVARAFSQCHISL 196
Query: 184 SVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR----PG 239
SV+CP+QLP L +Y+ AK+NPRA+DP + +K+ LVLISE+F+EAR L R P
Sbjct: 197 SVVCPRQLPSLKNLYSVAKQNPRASDPSNEIAKHTQHLVLISESFLEARNCLRRVTQAPA 256
Query: 240 VA---NLAPNQNPVKMD---IAPVT-SVTGPAP-TSIPSV--------NGINRPPISVGN 283
+A ++ P+ VK++ AP+T T P P T++PSV +G +S GN
Sbjct: 257 LAAAVSMPPSPTSVKVEQQAAAPLTVQTTQPVPATAVPSVSTGTVPTTSGRQSQIMSNGN 316
Query: 284 VPTATVKVEPSTVTSMVNGPTFPHIPSVPRP--ASQGVPSLQTSSPSSTSQEMIT----- 336
+PT+TVK+E + + GP P + A+ +P + + S+ SQE++
Sbjct: 317 IPTSTVKIEHVSTS----GPLSYGSPPMANTSMAAVSLPIQSSGATSAMSQEVLRPPLGS 372
Query: 337 -SGDSVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMG 395
S +V + K + + Q RP+ PAA+ +N Q RQ +AA++ S G ++G
Sbjct: 373 DSSTAVQDFKSINTNTLQSHRPV-PAASVLN------QIRQGAGSAAVSSILSAGSLAVG 425
Query: 396 QTPMAMHMSNMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTS 455
Q +GM + P SQP +S G++ GS +L P N+ +
Sbjct: 426 Q------------AGMGITQPVSQP--ASLAHGLSGDAGSASLG-----PVQGNANTSSI 466
Query: 456 APSNLSGNSNPSISQPMGTLQGGASMGQSVGMSQGNHS------GGQMVQN-GISMNQNM 508
PSN + QP G + +VGM+Q + GGQ VQ G+ M +
Sbjct: 467 LPSNAPAG----MMQPASMPSGLPPVASTVGMAQSLQAANPLVVGGQSVQGAGLGMPHSS 522
Query: 509 MSGLGPS---GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQ 565
++ PS G + G ++P +Q G P + N + + T+ +
Sbjct: 523 IA--APSNSVGSAPNAGVLLP------MSQPGQNPATGNAGVSHLVSNGVATTPPQQPAN 574
Query: 566 SKYVKVWEGSLSGQRQGQPVFITKLE 591
+KY K+W+G+L+GQR G+PV I LE
Sbjct: 575 TKYTKLWQGTLAGQRHGKPVPICSLE 600
>gi|302784420|ref|XP_002973982.1| hypothetical protein SELMODRAFT_442372 [Selaginella moellendorffii]
gi|300158314|gb|EFJ24937.1| hypothetical protein SELMODRAFT_442372 [Selaginella moellendorffii]
Length = 750
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 218/624 (34%), Positives = 331/624 (53%), Gaps = 86/624 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYL--EKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
L++AVE TAA+GP W + S+ L + R F + QK + + +E++LV F H SY
Sbjct: 26 LVLAVEATAALGPSWPLLRSEILVPDWYFRAFYGQDGNVQKDNGATLEMALVVFRGHDSY 85
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CL+QRSGWT +++F WLS+I F+GGGF + A+AEGL+EAL+M P +Q N
Sbjct: 86 SGCLLQRSGWTPSLELFQLWLSSIDFSGGGFGEVAVAEGLAEALVM--CCPT-TQPPSNQ 142
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESR-LSDAETVAKSFVQCSVS 182
QRHCILVAASNPH L TPV P + + +A+ + L+DAE VA++F QC +S
Sbjct: 143 ACQRHCILVAASNPHRLQTPVPHPPL-----STGADAKPDHWWLADAEAVARAFSQCHIS 197
Query: 183 LSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR----P 238
LSV+CP+QLP L +Y+ AK+NPRA+DP + +K+ LVLISE+F+EAR L R P
Sbjct: 198 LSVVCPRQLPSLKNLYSVAKQNPRASDPSNEIAKHTQHLVLISESFLEARNCLRRVTQAP 257
Query: 239 GVA--NLAPNQNPVKMD---IAPVT-SVTGPAP-TSIPSVNGINRPP--------ISVGN 283
+A ++ P+ VK++ AP+T T P P T++PSV+ P +S GN
Sbjct: 258 ALAAVSMPPSPTSVKVEQQAAAPLTVQTTQPVPATAVPSVSTGTVPTTSGRQSQIMSNGN 317
Query: 284 VPTATVKVEPSTVTSMVNGPTFPHIPSVPRP--ASQGVPSLQTSSPSSTSQEMI------ 335
+PT+TVK+E + + GP P + A+ +P + + S+ SQ+++
Sbjct: 318 IPTSTVKIEHVSTS----GPLSYGSPPMANTSMAAVSLPIQSSGATSAMSQDVLRPPLGS 373
Query: 336 TSGDSVPEVKPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMG 395
S +V + K + + Q RP+ PAA+ +N Q RQ +AA++ S G ++G
Sbjct: 374 DSSTAVQDFKSINTNSLQSHRPV-PAASVLN------QIRQGAGSAAVSSILSAGSLAVG 426
Query: 396 QTPMAMHMSNMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTS 455
Q G+ + P SQP +S G++ GS +L P N+ +
Sbjct: 427 QV------------GLGITQPVSQP--ASMAHGLSGDAGSASLG-----PVQGNANTSSI 467
Query: 456 APSNLSGNSNPSISQPMGTLQGGASMGQSVGMSQGNHS------GGQMVQN-GISMNQNM 508
PSN + QP G + +VGM+Q + GGQ VQ G+ M +
Sbjct: 468 LPSNAPAG----MMQPASMPSGLPPVASTVGMAQSLQAANPLVVGGQSVQGAGLGMPHSS 523
Query: 509 MSGLGPS-GVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSK 567
++ S G + G ++P +Q G P + N + + + T+ + +K
Sbjct: 524 IAAPSNSVGSAPNAGVLLPM------SQPGQNPATGNAGVSHLVSNAVATTPPQQPANTK 577
Query: 568 YVKVWEGSLSGQRQGQPVFITKLE 591
Y K+W+G+L+GQR G+PV I LE
Sbjct: 578 YTKLWQGTLAGQRHGKPVPICSLE 601
>gi|61611689|gb|AAX47175.1| PHYTOCHROME AND FLOWERING TIME 1 [Pisum sativum]
Length = 250
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/228 (66%), Positives = 171/228 (75%), Gaps = 9/228 (3%)
Query: 365 VNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPTSQPVFSS 424
VNILNNLSQARQVMN+AAL+GGTS+GL SMGQTP+A+HMSNMISSG SS P Q VFSS
Sbjct: 1 VNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPIAIHMSNMISSGTTSSGPAGQNVFSS 60
Query: 425 AQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASMGQS 484
ITS SG+LT ++QV QNSGL S SA SNLS + N ISQP LQG SMGQ
Sbjct: 61 GPPVITS---SGSLTASAQVRQNSGLASLPSATSNLSSSPNNGISQPSTNLQGAVSMGQQ 117
Query: 485 VGMSQ-GNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSV 543
V + + SG QM Q G++M+QN+M+GLG S VSSGTG MIPTPGM+QQ QSGM PL+
Sbjct: 118 VPRYEPRSLSGAQMAQGGVNMSQNVMNGLGQSDVSSGTGAMIPTPGMTQQVQSGMPPLA- 176
Query: 544 NNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
NN T NM L QQT QSKY++VWEGSLSGQRQGQPVFITKLE
Sbjct: 177 NNATTANMPLPQQTVYV----QSKYIRVWEGSLSGQRQGQPVFITKLE 220
>gi|302761188|ref|XP_002964016.1| hypothetical protein SELMODRAFT_405603 [Selaginella moellendorffii]
gi|300167745|gb|EFJ34349.1| hypothetical protein SELMODRAFT_405603 [Selaginella moellendorffii]
Length = 626
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 186/309 (60%), Gaps = 30/309 (9%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVT----FNTHG 61
L++AVE TAA+GP W + S+YL+K+ R + L ++ + + V +
Sbjct: 26 LVLAVEATAALGPSWPLLRSEYLDKLAR-RTMGLLWRWRSWSFEAMIPTVVGKDFREVYP 84
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
S CL+QRSGWT +++F WLS+I F+GGGF + A+AEGL+EAL+M P +Q
Sbjct: 85 SITGCLLQRSGWTPSLELFQLWLSSIDFSGGGFGEVAVAEGLAEALVM--CCPT-TQPPS 141
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
N QRHCILV ASNPH L PV P + + ++ L+DAETVA++F QC +
Sbjct: 142 NQACQRHCILVPASNPHRLQAPVPHPPLSTGADAKPDQWW----LADAETVARAFSQCHI 197
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR---- 237
SLSV+CP+QLP L +Y+ AK+NPRA+DP + +K+ LVLISE+F+EAR L R
Sbjct: 198 SLSVVCPRQLPSLKNLYSVAKQNPRASDPSNEIAKHTQHLVLISESFLEARNCLRRVIQA 257
Query: 238 PGVA--NLAPNQNPVKMD---IAPV-TSVTGPAP-TSIPSV-------NGINRPPISVGN 283
P +A ++ P+ VK++ AP+ T P P T++PSV NG +S G+
Sbjct: 258 PALAAVSMPPSPTSVKVEQQAAAPLAVQTTQPVPATAVPSVSTGTVPTNGRQSQIMSNGS 317
Query: 284 VPTATVKVE 292
+P +TVK+E
Sbjct: 318 IPMSTVKIE 326
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 566 SKYVKVWEGSLSGQRQGQPVFITKLEVCSQT 596
+KY K+W+G+L+GQR G+PV I LE QT
Sbjct: 487 TKYTKLWQGTLAGQRHGKPVQICSLEGYRQT 517
>gi|168051357|ref|XP_001778121.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670443|gb|EDQ57011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 308/620 (49%), Gaps = 81/620 (13%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
MS++QL+VAVE T A+GP+W ++++Y++KI+R F +E QK +S E++LV FNTH
Sbjct: 2 MSQRQLVVAVEATGALGPFWSVLLTEYVDKIVRAF-FDESNNQKNGSSPGEVALVVFNTH 60
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQ-N 119
GS+ L+++SGWT +D+F WLS + F GGGF++AA+AE L+EALM ++++ + + N
Sbjct: 61 GSHSDFLLRQSGWTSSMDLFFKWLSALTFEGGGFSEAAVAEALAEALMEWTISYDLYELN 120
Query: 120 QQ---------NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAE 170
Q V Q+HC+L+AASNP+ LPTPV RP + L + + L+DAE
Sbjct: 121 LQMCCPGPKPPTVPHQKHCLLIAASNPYRLPTPVMRPPVILLSTGQAELQSEQWWLADAE 180
Query: 171 TVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFME 230
TVAK+F AKRNPRAAD D SK LVLISE F E
Sbjct: 181 TVAKAF----------------------PPAKRNPRAADTGPDFSK--LHLVLISEGFPE 216
Query: 231 ARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVK 290
+ AL R A+ + + + P+ + T AP S P+V + P +VG +
Sbjct: 217 GKLALRRASGASNTAVSSSLSAKLEPLLATTTSAP-SQPAVRPM-PPSTAVGAMMGRQAV 274
Query: 291 VEPSTVTSMVNGPTFPH--IPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLV 348
S+ +M N + H + +VP P+ PS S + T Q + + D+ + V
Sbjct: 275 SNGSSGVTMENQ-SLSHNTVAAVPLPSQH--PSSSGVSGTDTMQTSVQTSDTSASSQAKV 331
Query: 349 SGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSI--GLQSMGQTPMAMHMSNM 406
P+ + + + L+Q ++ A GG ++ G S P +
Sbjct: 332 G-------PVGGNPSTLGHVGTLTQPHKMPGGAVANGGPAVPSGASSNPTAPSS------ 378
Query: 407 ISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNP 466
++SG A+ +P + V ++ S T G T G S + S N+ T A SNL G +
Sbjct: 379 LTSGPATIIPGNGNVLTTIGSATTV--GMNTGIGHSSIGTLSA-NANTIASSNLVGPTGS 435
Query: 467 SISQPMG-----TLQGGASMGQSVGMSQGNHSG-GQMVQNGISMNQNMMSGLGPSGVSSG 520
+ +G LQ G G Q G + G++ + LG +GV++G
Sbjct: 436 LVPNQLGPSTVSPLQQGVGQLPVSGAGQPQAKPLGAIAGMGVT-----TTALGTAGVNAG 490
Query: 521 TGTMIPTPGMSQQAQSGMQPLSVN----NNTAVNMQLSQQTSSALHSSQSKYVKVWEGSL 576
+M P+ G Q Q +QPL+ TA + QQ S ++ KY K+WEG L
Sbjct: 491 VNSMPPSSGFVQPVQP-VQPLAPGIHGVTQTAQSATPPQQPSGSM-----KYTKLWEGIL 544
Query: 577 SGQRQGQPVFITKLEVCSQT 596
+GQRQ +PV I KLE QT
Sbjct: 545 AGQRQQKPVPICKLEGYRQT 564
>gi|356498324|ref|XP_003518003.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 122
Score = 156 bits (395), Expect = 3e-35, Method: Composition-based stats.
Identities = 72/117 (61%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60
M+ K+LIV VE TAAMGPYW++I+ DYL+KIIRCF N ++ + S+S+VE +LV++NTH
Sbjct: 1 MAAKRLIVVVESTAAMGPYWETILRDYLDKIIRCFGEN-VSTVQNSSSSVEFALVSYNTH 59
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGS 117
G Y CLVQR+GWT+D D+F WLS+IPF+GGGFNDA IAEGL+EALM GS
Sbjct: 60 GCYSDCLVQRTGWTRDPDVFFLWLSSIPFSGGGFNDAVIAEGLAEALMRICSEELGS 116
>gi|297734174|emb|CBI15421.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 88/122 (72%)
Query: 80 FLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRHCILVAASNPHP 139
FL WLS I F+G G++D AIAEGL++AL+MF P+G+Q QQ + G+RHCILVAASNP P
Sbjct: 4 FLQWLSAISFSGDGYDDLAIAEGLADALLMFPRHPHGTQTQQRLLGRRHCILVAASNPFP 63
Query: 140 LPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYN 199
P PV+ P++QNL + + A E L+D VAK F QC VSLSVI PKQLPKL IYN
Sbjct: 64 FPIPVHLPKIQNLQGAQISGATTEFSLADPNMVAKLFTQCCVSLSVISPKQLPKLREIYN 123
Query: 200 AA 201
+
Sbjct: 124 SV 125
>gi|297609190|ref|NP_001062824.2| Os09g0306700 [Oryza sativa Japonica Group]
gi|255678754|dbj|BAF24738.2| Os09g0306700, partial [Oryza sativa Japonica Group]
Length = 170
Score = 132 bits (333), Expect = 4e-28, Method: Composition-based stats.
Identities = 58/96 (60%), Positives = 78/96 (81%)
Query: 16 MGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTK 75
+GPYW V+DY+EKI+R FC +E+AGQK + + EL+LV F+THG Y A VQRSGWTK
Sbjct: 63 LGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHGPYSAFCVQRSGWTK 122
Query: 76 DVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFS 111
D+++FL WLS I F+GGGF++AAI+EGL+EALM+ +
Sbjct: 123 DMNVFLSWLSGISFSGGGFSEAAISEGLAEALMVLT 158
>gi|14190783|gb|AAF65166.2|AF166494_1 putative phloem transcription factor M1 [Apium graveolens]
Length = 353
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 77/95 (81%)
Query: 497 MVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQ 556
M+QNGI MNQNM+SG+G SG+SS TM+PTPGM QQ Q G Q L + NN A NM L Q
Sbjct: 1 MMQNGIGMNQNMISGVGQSGISSANSTMMPTPGMGQQGQPGPQSLGMANNAAANMPLPSQ 60
Query: 557 TSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
TS+A+ S+QSKYV+VWEG+LSGQRQGQPVFIT+LE
Sbjct: 61 TSNAMQSAQSKYVRVWEGNLSGQRQGQPVFITRLE 95
>gi|302768973|ref|XP_002967906.1| hypothetical protein SELMODRAFT_408814 [Selaginella moellendorffii]
gi|300164644|gb|EFJ31253.1| hypothetical protein SELMODRAFT_408814 [Selaginella moellendorffii]
Length = 195
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 31/178 (17%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
+ L++AVE AA+GP W + S+YL+KI R +T + +E++LV F H SY
Sbjct: 21 QYLVLAVE-AAALGPSWPLLRSEYLDKIAR----------RTMGATLEMALVVFRGHDSY 69
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
CL+QRSG T +++F WLS+I F+GGGF + A+AEGL+EAL V P+ N
Sbjct: 70 SGCLLQRSGRTPSLELFQLWLSSIDFSGGGFGEVAVAEGLAEAL----VPPS------NQ 119
Query: 124 DGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCILVAASNPH ++Q+L + + + L+DAETV+++F Q V
Sbjct: 120 ASQRHCILVAASNPH---------RLQSLIRGADAKP-GHWWLADAETVSRAFSQLFV 167
>gi|224099339|ref|XP_002311444.1| predicted protein [Populus trichocarpa]
gi|222851264|gb|EEE88811.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 58/66 (87%)
Query: 108 MMFSVAPNGSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLS 167
MMF + PNG+Q Q N DGQR+CIL+AASNPHPLPTPVYRPQ+QNL+Q EN +AQ ESRLS
Sbjct: 1 MMFPITPNGNQTQPNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLS 60
Query: 168 DAETVA 173
DAETVA
Sbjct: 61 DAETVA 66
>gi|168051429|ref|XP_001778157.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670479|gb|EDQ57047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 91/143 (63%), Gaps = 10/143 (6%)
Query: 44 KTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGL 103
K +S E++LV F THGS+ L+ +SGWT +D+F WLS + F GGGF++AA+AE L
Sbjct: 70 KNGSSPGEVALVVFKTHGSHSDFLLWQSGWTSSMDLFFKWLSALTFEGGGFSEAAVAEAL 129
Query: 104 SEALMMFSVAPNGSQ-NQQ---------NVDGQRHCILVAASNPHPLPTPVYRPQMQNLD 153
+EALM ++++ + + N Q V +HC+L+AASNPHP+PTPV RP + L
Sbjct: 130 AEALMEWTISYDLYELNLQMCCPGPKPPTVPQHKHCLLIAASNPHPIPTPVMRPPVILLP 189
Query: 154 QNENNEAQAESRLSDAETVAKSF 176
+ + L+DAETVAK+F
Sbjct: 190 TGQAELQSDKWWLADAETVAKAF 212
>gi|356498322|ref|XP_003518002.1| PREDICTED: uncharacterized protein LOC100789451 [Glycine max]
Length = 827
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 154 QNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVD 213
Q+E E+ + L DAE VAK+F Q S+SLSVICPKQLPK+ AIYNA KRN +AADPPV
Sbjct: 356 QSETIESFPGNCLYDAEAVAKAFPQFSISLSVICPKQLPKIKAIYNAGKRNSKAADPPV- 414
Query: 214 NSKNPHFLVLISENFMEARAALS 236
+K PHFL+LISE F EA+ L
Sbjct: 415 LAKTPHFLILISEGFREAQGVLK 437
>gi|147907042|ref|NP_001085778.1| mediator of RNA polymerase II transcription subunit 25 [Xenopus
laevis]
gi|82184340|sp|Q6GP15.1|MED25_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25
gi|49118844|gb|AAH73333.1| MGC80744 protein [Xenopus laevis]
Length = 801
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 33/251 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ YL I F + G + SLV FNT
Sbjct: 14 VVFVIEGTANLGPYFESLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 70
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL +I F GGG + IAEGLS AL +F + +
Sbjct: 71 DCAPESYVQCHAPTSSAYEFVQWLDSIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 126
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H CIL+ S P+ LP E+ S + E + +
Sbjct: 127 MREQIGQTHKVCILICNSPPYLLPA---------------VESTTYSGYT-TENLVQKIG 170
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR 237
+ + S+I P++LP L ++ A P D S++P ++L+ + A S
Sbjct: 171 ERGIHFSIISPRKLPALRTLFEKAMPVGLIEPQPKDYSQDPRHMILVRGMVLPVGGATSV 230
Query: 238 PGVANLAPNQN 248
PGV + P Q+
Sbjct: 231 PGV--MPPKQH 239
>gi|156717452|ref|NP_001096266.1| mediator of RNA polymerase II transcription subunit 25 [Xenopus
(Silurana) tropicalis]
gi|158705954|sp|A4IHD9.1|MED25_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25
gi|134025443|gb|AAI35483.1| LOC100124831 protein [Xenopus (Silurana) tropicalis]
Length = 805
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ YL I F + G + SLV FNT
Sbjct: 15 VVFVIEGTANLGPYFESLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 71
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL +I F GGG + IAEGLS AL +F + +
Sbjct: 72 DCAPESYVQCHAPTSSAYEFVQWLDSIRFMGGGGESCSLIAEGLSTALQLF----DDFKK 127
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H CIL+ S P+ LP E+ S + E + +
Sbjct: 128 MREQIGQTHKVCILICNSPPYLLPA---------------VESTTYSGYT-TENLVQKIG 171
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR 237
+ + SVI P++LP L ++ A P D S++P ++L+ + A S
Sbjct: 172 ERGIHFSVISPRKLPALRTLFEKAMPVGLIEPQPKDYSQDPRHMILVRGMVLPVGGATSV 231
Query: 238 PGV 240
PGV
Sbjct: 232 PGV 234
>gi|432867625|ref|XP_004071275.1| PREDICTED: uncharacterized protein LOC101164559 [Oryzias latipes]
Length = 695
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ +Y+ I F + G + LV FNT
Sbjct: 15 VVFVIEGTANLGPYFESLRKNYILPAIEYFNGGPPAETDFGG---DYGGTQYGLVVFNTV 71
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ W+ +I F GGG + IAEGLS AL +F + +
Sbjct: 72 DCAPESYVQCHAPTSSAYEFVSWIDSIQFMGGGAESCSLIAEGLSVALQLF----DDFKK 127
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ + + + AE++AK
Sbjct: 128 MREQIGQTHKVCVLLCNSPPYLLPA---------------VESVSYTGCT-AESLAKIIR 171
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLI 224
+ SV+ P++LP L +++ A A +P D S++P +VLI
Sbjct: 172 DRGIHFSVVAPRKLPALRSLFERASPLNGAVEPLPDYSQDPFHMVLI 218
>gi|182627695|gb|ACB88867.1| mediator complex subunit MED25 variant MED25_i8 [Homo sapiens]
Length = 253
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 37/247 (14%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++ +EGTA +GPY++ + YL I CF + G + SLV FNT
Sbjct: 17 DVVFVIEGTANLGPYFEGLRKHYLLPAIECFNGGPPAETDFGGDY---GGTQYSLVVFNT 73
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQ 118
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 74 VDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFK 129
Query: 119 NQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 130 KMREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQI 173
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLISENFMEAR 232
+ + S++ P++LP L ++ A P A PP D S++P +VL+ + A
Sbjct: 174 GERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLVRGLVLPAG 231
Query: 233 AALSRPG 239
A R G
Sbjct: 232 PAAQRHG 238
>gi|348559482|ref|XP_003465545.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Cavia porcellus]
Length = 747
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASN--VELSLVTFNTHGSY 63
++ +EGTA +GPY++ + YL I F A + + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETNFEGDDGGTQYSLVVFNTVDCA 77
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQN 122
VQ T F+ WL +I F GGG + IAEGLS AL +F + + +
Sbjct: 78 PESYVQCHAPTSSAYEFVTWLDSIKFMGGGGESCSLIAEGLSTALQLF----DDFKKMRE 133
Query: 123 VDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
GQ H C+L+ S P+ LP E+ S + E++ + +
Sbjct: 134 QIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQEIGERG 177
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 178 IHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 223
>gi|126722793|ref|NP_001075914.1| mediator of RNA polymerase II transcription subunit 25 [Bos taurus]
gi|158705953|sp|A2VE44.1|MED25_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25
gi|126010729|gb|AAI33566.1| MED25 protein [Bos taurus]
Length = 746
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + ET+ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TETLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIYFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 223
>gi|426244077|ref|XP_004015862.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 25 [Ovis aries]
Length = 747
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNV--------ELSLVTF 57
++ +EGTA +GPY++ + YL I + AG + +S V + SLV F
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIE----EKEAGSQMKSSPVLPSQYGGTQYSLVVF 73
Query: 58 NTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNG 116
NT VQ T F+ WL I F GGG + IAEGLS AL +F +
Sbjct: 74 NTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DD 129
Query: 117 SQNQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAK 174
+ + GQ H C+L+ S P+ LP E+ S + ET+ +
Sbjct: 130 FKKMREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TETLVQ 173
Query: 175 SFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 174 KIGERGIYFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 225
>gi|296477496|tpg|DAA19611.1| TPA: mediator of RNA polymerase II transcription subunit 25 [Bos
taurus]
Length = 653
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + ET+ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TETLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIYFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 223
>gi|440793946|gb|ELR15117.1| hypothetical protein ACA1_215990 [Acanthamoeba castellanii str.
Neff]
Length = 820
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
+ L+ V+ TAAMGP+ + Y++ +IR V + A +K +EL++V F +
Sbjct: 6 RHLVFIVDTTAAMGPHLPVLRDAYIDPLIRT-VVEQSASKK---EKLELAMVAFRDYPPA 61
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
+V+ SG+T+D F W+ + FA GG +AE + A + + + +
Sbjct: 62 GNYVVRVSGFTRDPKQFGSWMDRLDFAAGGHQTVPLAEAFAAAFNL---------SYERM 112
Query: 124 DGQRHCILVAASNPHP--LPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+R+ +LV+ + P+ +P +Y Q L S A +A +F + +
Sbjct: 113 AKERYFVLVSNTAPYQQGIPARLYSIPGQPLG-------------STAADIATTFPKAQI 159
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVL 223
+LSVI P+QL +L I+ A P A+ PH ++L
Sbjct: 160 ALSVISPRQLNELAEIFQKATI-PGWAESRGSKPDVPHMVLL 200
>gi|354497636|ref|XP_003510925.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Cricetulus griseus]
Length = 742
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY+ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFDELRDHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL+ I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLNGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADP---PVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P +P PVD S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA-PPALLEPLQQPVDVSQDPRHMVLV 223
>gi|281427099|ref|NP_001163897.1| mediator complex subunit 25 [Rattus norvegicus]
Length = 746
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPADVSQDPRHMVLV 223
>gi|149056013|gb|EDM07444.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast) (predicted), isoform CRA_b [Rattus norvegicus]
Length = 745
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPADVSQDPRHMVLV 223
>gi|395858316|ref|XP_003801517.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Otolemur garnettii]
Length = 746
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPADVSQDPRHMVLV 223
>gi|344257322|gb|EGW13426.1| Mediator of RNA polymerase II transcription subunit 25 [Cricetulus
griseus]
Length = 735
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY+ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFDELRDHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL+ I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLNGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADP---PVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P +P PVD S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA-PPALLEPLQQPVDVSQDPRHMVLV 223
>gi|410903015|ref|XP_003964989.1| PREDICTED: uncharacterized protein LOC101068687 [Takifugu rubripes]
Length = 704
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ +Y+ I F + G + LV FNT
Sbjct: 22 VVFVIEGTANLGPYFESLRKNYILPAIEYFNGGPPAETDFGG---DYGGTQYGLVVFNTV 78
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ W+ +I F GGG + IAEGL+ AL +F + +
Sbjct: 79 DCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLAVALQLF----DDFKK 134
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ + + + A+ + K
Sbjct: 135 MREQIGQTHKVCVLLCNSPPYLLPA---------------VESVSYTGCT-ADNLVKIIR 178
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLI 224
+ SV+ P++LP L A+Y A A + D S++P +VL+
Sbjct: 179 DRGIHFSVVAPRKLPALRALYERASSVGGAVESHPDYSQDPFHMVLV 225
>gi|311257996|ref|XP_003127384.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Sus scrofa]
Length = 746
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ K P A PP D S++P +VL+
Sbjct: 175 ERGIYFSIVSPRKLPALRLLFE--KAAPPAMLEPLQPPADVSQDPRHMVLV 223
>gi|301764931|ref|XP_002917873.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Ailuropoda melanoleuca]
Length = 746
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 EQGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|348510080|ref|XP_003442574.1| PREDICTED: hypothetical protein LOC100690539 [Oreochromis
niloticus]
Length = 713
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ +Y+ I F + G + LV FNT
Sbjct: 22 VVFVIEGTANLGPYFESLRKNYILPAIEYFNGGPPAETDFGG---DYGGTQYGLVVFNTV 78
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ W+ I F GGG + IAEGLS AL +F + +
Sbjct: 79 DCAPESYVQCHAPTSSAFEFVSWIDNIQFMGGGAESCSLIAEGLSVALQLF----DDFKK 134
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ + + + A+++ K
Sbjct: 135 MREQIGQTHKVCVLLCNSPPYLLPA---------------VESVSYTGCT-ADSLVKIIR 178
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLI 224
+ SV+ P++LP L A++ A A + D S++P +VL+
Sbjct: 179 DRGIHFSVVAPRKLPPLRALFERASPVGGAVESLPDYSQDPFHMVLV 225
>gi|224118904|ref|XP_002317934.1| predicted protein [Populus trichocarpa]
gi|222858607|gb|EEE96154.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240
VSLSVI P+QLP L IY+AA N A DP +N KN FLVL+S+ F EA AL
Sbjct: 35 VSLSVISPRQLPILRRIYSAANMNSNAMDPFFNNVKNSDFLVLLSDKFFEAHVAL----C 90
Query: 241 ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTATVKVEPSTVT--S 298
N A +Q +D++ + PS N I I+ G++ VK P T
Sbjct: 91 GNEATDQG---LDLSEEDILLLEQVLYRPSTNQIG---IAEGSISNEEVKTAPFTKLQPD 144
Query: 299 MVNGPTF-PHIPSV--PRPASQGVPSLQTSSPSS-TSQEMITSGDSVPEVKPLVSGMSQP 354
M P P +P P+ S+ +P LQT SQEMI + P L SQ
Sbjct: 145 MAKLPRVPPFVPQYIQPQHFSKTIPCLQTYDRDDFASQEMIFRNTNAPRAIVL----SQK 200
Query: 355 LRPMAPAAANVNIL 368
RP+ P N +I+
Sbjct: 201 ARPLIPTMVNPSII 214
>gi|20149312|ref|NP_083641.1| mediator of RNA polymerase II transcription subunit 25 [Mus
musculus]
gi|81901845|sp|Q8VCB2.1|MED25_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25;
Short=mMED25
gi|18203942|gb|AAH21333.1| Mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast) [Mus musculus]
gi|21410398|gb|AAH31138.1| Med25 protein [Mus musculus]
gi|148690822|gb|EDL22769.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_b [Mus musculus]
Length = 745
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEELRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADP---PVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P +P P D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA-PPALLEPLQQPADVSQDPRHMVLV 223
>gi|431920747|gb|ELK18520.1| Mediator of RNA polymerase II transcription subunit 25 [Pteropus
alecto]
Length = 689
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPTDVSQDPRHMVLV 223
>gi|345786063|ref|XP_541489.3| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform 1 [Canis lupus familiaris]
Length = 745
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 EQGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|410982396|ref|XP_003997543.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Felis catus]
Length = 746
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGETCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 EQGIHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPTDVSQDPRHMVLV 223
>gi|351702751|gb|EHB05670.1| Mediator of RNA polymerase II transcription subunit 25
[Heterocephalus glaber]
Length = 768
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 40 VVFVIEGTANLGPYFEELRKYYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 96
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 97 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 152
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 153 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQEIG 196
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNP--RAADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A PP D S++P +VL+
Sbjct: 197 ERGIHFSIVSPRKLPALRLLFEKAAPPAMLETLQPPADVSQDPRHMVLV 245
>gi|148690821|gb|EDL22768.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_a [Mus musculus]
Length = 743
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 19 VVFVIEGTANLGPYFEELRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 75
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 76 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 131
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 132 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 175
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADP---PVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P +P P D S++P +VL+
Sbjct: 176 ERGIHFSIVSPRKLPALRLLFEKAA-PPALLEPLQQPADVSQDPRHMVLV 224
>gi|296234386|ref|XP_002762429.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform 1 [Callithrix jacchus]
Length = 747
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|380797909|gb|AFE70830.1| mediator of RNA polymerase II transcription subunit 25, partial
[Macaca mulatta]
Length = 743
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 14 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 70
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 71 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 126
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 127 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 170
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 171 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 219
>gi|50428940|ref|NP_112235.2| mediator of RNA polymerase II transcription subunit 25 [Homo
sapiens]
gi|158706143|sp|Q71SY5.2|MED25_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Activator interaction
domain-containing protein 1; AltName:
Full=Activator-recruited cofactor 92 kDa component;
Short=ARC92; AltName: Full=Mediator complex subunit 25;
AltName: Full=p78
gi|40850935|gb|AAH65297.1| Mediator complex subunit 25 [Homo sapiens]
gi|119572931|gb|EAW52546.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_c [Homo sapiens]
gi|158259943|dbj|BAF82149.1| unnamed protein product [Homo sapiens]
gi|190690427|gb|ACE86988.1| mediator complex subunit 25 protein [synthetic construct]
gi|190691805|gb|ACE87677.1| mediator complex subunit 25 protein [synthetic construct]
Length = 747
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|402906366|ref|XP_003915973.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Papio anubis]
gi|383408381|gb|AFH27404.1| mediator of RNA polymerase II transcription subunit 25 [Macaca
mulatta]
Length = 747
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|109125576|ref|XP_001115505.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform 3 [Macaca mulatta]
Length = 747
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|119572929|gb|EAW52544.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_a [Homo sapiens]
Length = 747
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|426389661|ref|XP_004061238.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Gorilla gorilla gorilla]
Length = 788
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 59 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 115
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 116 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 171
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 172 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 215
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ K P A PP D S++P +VL+
Sbjct: 216 ERGIHFSIVSPRKLPALRLLFE--KAAPPALLEPLQPPTDVSQDPRHMVLV 264
>gi|417404681|gb|JAA49081.1| Putative mediator of rna polymerase ii transcription subunit 25 log
isoform cra b [Desmodus rotundus]
Length = 795
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 223
>gi|42765934|gb|AAS45401.1| ARC/mediator transcriptional coactivator subunit [Homo sapiens]
Length = 796
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|119572935|gb|EAW52550.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_g [Homo sapiens]
Length = 734
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|47550799|ref|NP_999931.1| mediator of RNA polymerase II transcription subunit 25 [Danio
rerio]
gi|82187124|sp|Q6PEH8.1|MED25_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25
gi|34783768|gb|AAH58057.1| Mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast) [Danio rerio]
Length = 701
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ ++Y+ I F + G + LV FNT
Sbjct: 15 VVFVIEGTANLGPYFESLRNNYILPTIEYFNGGPPAETDFGG---DYGGTQYGLVVFNTV 71
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ W+ +I F GGG + IAEGLS AL +F + +
Sbjct: 72 DCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQLF----DDFKK 127
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP A +S A S V
Sbjct: 128 MREQIGQTHKVCVLLCNSPPYLLP--------------------AVESVSYTGCTADSLV 167
Query: 178 QC----SVSLSVICPKQLPKLTAIYNAAKRN---PRAADPPVDNSKNPHFLVLI 224
Q + SVI P++LP L +++ A P ++ P D S++P +VL+
Sbjct: 168 QIIRDRGIHFSVIAPRKLPALRSLFERASSVAGLPESSHP--DYSQDPFHMVLV 219
>gi|297277655|ref|XP_002801398.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Macaca mulatta]
Length = 730
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|355703789|gb|EHH30280.1| hypothetical protein EGK_10907 [Macaca mulatta]
Length = 767
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 59 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 115
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 116 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 171
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 172 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 215
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 216 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 264
>gi|417404505|gb|JAA49001.1| Putative mediator of rna polymerase ii transcription subunit 25 log
isoform cra b [Desmodus rotundus]
Length = 771
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQPPADVSQDPRHMVLV 223
>gi|39748717|emb|CAE84581.1| activator interaction domain 1 protein [Homo sapiens]
Length = 754
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|355701791|gb|AES01794.1| mediator complex subunit 25 [Mustela putorius furo]
Length = 715
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 10 VEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTHGSYC 64
+EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 15 IEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTVDCAP 71
Query: 65 ACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQNV 123
VQ T F+ WL I F GGG + IAEGLS AL +F + + +
Sbjct: 72 ESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKKMREQ 127
Query: 124 DGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
GQ H C+L+ S P+ LP E+ S + E++ + + +
Sbjct: 128 IGQTHRVCLLICNSPPYLLPA---------------VESTTYSGYT-TESLVQKIGEQGI 171
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 172 HFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 216
>gi|119572933|gb|EAW52548.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_e [Homo sapiens]
Length = 754
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|156369012|ref|XP_001627984.1| predicted protein [Nematostella vectensis]
gi|156214949|gb|EDO35921.1| predicted protein [Nematostella vectensis]
Length = 855
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 27/230 (11%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFC------VNELAGQKTSASNVELSLVT 56
E +++ VEGTA + +++++ ++Y++ II N G + + + LV
Sbjct: 9 EHEVVFVVEGTANLLLHFETLKTEYIDPIIEYINGGPVQESNSFFGDENGPN--QYCLVV 66
Query: 57 FNTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPN 115
+ T S+ VQ +T+DV FL L+ + F GGG D + +AEG+ AL F
Sbjct: 67 YGTKASHPEDAVQLVRYTRDVHDFLQALNEVKFDGGGGQDCSLLAEGMGFALQAFD---E 123
Query: 116 GSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKS 175
++ +V+ RHCI+V S P P P+ R + L++ + A ++ +
Sbjct: 124 MRVSRGSVNCHRHCIVVCNSPPFPQPS---RECLSYLNKTVDQLAAIMAKPEN------- 173
Query: 176 FVQCSVSLSVICPKQLPKLTAIYNAAKRNP-RAADPPVDNSKNPHFLVLI 224
++ LS+I P++ P L +++ + R+ + D +K P + +
Sbjct: 174 ----NIHLSIISPRKFPALQLVFDKSLRDDTKGMKSKTDYAKEPQHMACL 219
>gi|182627689|gb|ACB88864.1| mediator complex subunit MED25 variant MED25_i5 [Homo sapiens]
Length = 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 17 DVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNT 73
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQ 118
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 74 VDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFK 129
Query: 119 NQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 130 KMREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQI 173
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ K P A PP D S++P +VL+
Sbjct: 174 GERGIHFSIVSPRKLPALRLLFE--KAAPPALLEPLQPPTDVSQDPRHMVLV 223
>gi|297277652|ref|XP_001115473.2| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform 1 [Macaca mulatta]
Length = 726
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|182627691|gb|ACB88865.1| mediator complex subunit MED25 variant MED25_i6 [Homo sapiens]
Length = 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ K P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFE--KAAPPALLEPLQPPTDVSQDPRHMVLV 223
>gi|20377083|gb|AAM20739.1|AF261072_2 p78 [Homo sapiens]
Length = 747
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVSVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|119572932|gb|EAW52547.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_d [Homo sapiens]
Length = 725
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|119572930|gb|EAW52545.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_b [Homo sapiens]
Length = 796
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|119572934|gb|EAW52549.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_f [Homo sapiens]
Length = 741
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|12053009|emb|CAB66680.1| hypothetical protein [Homo sapiens]
Length = 715
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ K P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFE--KAAPPALLEPLQPPTDVSQDPRHMVLV 223
>gi|432099314|gb|ELK28571.1| Mediator of RNA polymerase II transcription subunit 25 [Myotis
davidii]
Length = 752
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E++ +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TESLVQKIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAA--------DPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAAPPPLPVPPAMLEPLQPPADVSQDPRHMVLV 229
>gi|410054324|ref|XP_003316596.2| PREDICTED: mediator of RNA polymerase II transcription subunit 25,
partial [Pan troglodytes]
Length = 713
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 59 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 115
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 116 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 171
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 172 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 215
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 216 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 264
>gi|397486616|ref|XP_003814422.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 25 [Pan paniscus]
Length = 1262
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|395751587|ref|XP_002829627.2| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform 2 [Pongo abelii]
Length = 1383
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|193786300|dbj|BAG51583.1| unnamed protein product [Homo sapiens]
Length = 724
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGT +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTVNLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++P +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDPRHMVLV 223
>gi|328767792|gb|EGF77840.1| hypothetical protein BATDEDRAFT_27121 [Batrachochytrium
dendrobatidis JAM81]
Length = 891
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF--CVNELAGQKTSASNVELSLVTFNTHG 61
K ++ V+G+AAM Y SI + Y+E I++ F C GQ V L LV + ++
Sbjct: 6 KDVVFVVDGSAAMKRY-SSIFTTYIEPIVKTFTECTETAVGQTEC---VRLGLVVYRSYP 61
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
SY VQ +T D +FL I + GG A AEGL+ A+ + S + Q ++
Sbjct: 62 SYSPFTVQTVVFTSDPAVFLSAYKAIDYRHGGITHNAAAEGLAVAMQLLS---SSQQTKE 118
Query: 122 NVDGQRHCILVAAS--NPHPLPTP---VYR 146
+HC+LV+A+ NP P P +YR
Sbjct: 119 QRVSDQHCVLVSATMINPSPCRLPCNNLYR 148
>gi|327290963|ref|XP_003230191.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Anolis carolinensis]
Length = 450
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++S+ YL I F + G + SLV FNT
Sbjct: 5 VVFVIEGTANLGPYFESLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 61
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL +I F GGG + I+EGLS AL +F + +
Sbjct: 62 DCAPESYVQCHAPTSSAYEFVTWLDSIQFVGGGGESCSLISEGLSTALQLF----DDFKK 117
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ G H CIL+ S P+ LP E+ S + E + +
Sbjct: 118 MREQIGPTHKVCILICNSPPYLLPA---------------VESTTYSGYT-TENLVQKIG 161
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLI 224
+ + S+I P++LP L ++ A D S++P ++LI
Sbjct: 162 ERGIHFSIISPRKLPALRILFEKAVTGGMLEVQLKDYSQDPRHMILI 208
>gi|384247213|gb|EIE20700.1| hypothetical protein COCSUDRAFT_67190 [Coccomyxa subellipsoidea
C-169]
Length = 915
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASN--VELSLVTFNTHG 61
+++ VEGTAAM P+WQ I + L+ I++ +L + +S S VEL+LV +
Sbjct: 16 ERICFVVEGTAAMFPFWQDIRTYCLDPILK-----DLESRTSSVSEPQVELALVICGSAT 70
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTI-PFAGGGFNDAAIAEGLSEALMMFSVAPNGSQ-- 118
+ C ++RSGWT+++ +F WL I P G +AE LSEA+ + A Q
Sbjct: 71 PWSQCPIERSGWTQNLHVFSQWLDAIQPSEGAPVPQPLLAEALSEAVYLLQTAARTCQPG 130
Query: 119 NQQNVDGQRHCILVAASNPHPLPTP 143
+QQ R I+ AS P L P
Sbjct: 131 SQQGPTHNR-VIVCVASEPSRLYVP 154
>gi|405972490|gb|EKC37256.1| Mediator of RNA polymerase II transcription subunit 25 [Crassostrea
gigas]
Length = 690
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 143/338 (42%), Gaps = 49/338 (14%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVN----ELAGQKTSASNVELSLVTFNTHG 61
+++ VE TA + Y + Y+ + F G S S +LVTF +
Sbjct: 14 VVLVVEATANLSAYIDVLKKYYIIPSLEVFNGGPPDPTDIGHDYSCS--LYNLVTFFSAD 71
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQ 120
+ SG T ++ F+ WL +P GGG + I EGLS AL +F +
Sbjct: 72 VIPDTTSRCSGVTTNIHEFITWLDDLPLIGGGGESCSHITEGLSTALHVFD-----DLQK 126
Query: 121 QNVD----GQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSD--AETVAK 174
+D QRHCILV S P+ LP+ Q R A+ +A
Sbjct: 127 IRIDIGLPVQRHCILVCNSPPYNLPS------------------QEGVRYVGYMADQLAS 168
Query: 175 SFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARA- 233
+ + LS+I P+++P L +Y + + P D + +P LVL+ +E RA
Sbjct: 169 MMAKRGIHLSIISPRKIPALQKLYEESTLPTDMSAPVKDFTTDPRHLVLLHGFQLEERAH 228
Query: 234 --ALSRPGVANLAPNQN---PVKMDIAPVTSVTGPAPTSIPSVNGINRPPISVGNVPTAT 288
A + A N+N P AP T + PAP+ +P + G P +T
Sbjct: 229 SPAGDHVNIEKPAENKNPSSPAPPSFAPSTGFS-PAPSLSEDSTEFKKPNTTSGGTPFST 287
Query: 289 VKVEPSTVTSMVNGPTFPHIPSVPRPA-SQGVPSLQTS 325
+ S +SM + P+ P P + +P+ SQG+ S+Q S
Sbjct: 288 ---QDSIASSMPSLPS-PQQPQMSQPSPSQGI-SMQHS 320
>gi|194385204|dbj|BAG61008.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 131 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 174
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADPPVDNSKNPHFLVLI 224
+ + S++ P++LP L ++ A P A PP D S++ +VL+
Sbjct: 175 ERGIHFSIVSPRKLPALRLLFEKAA--PPALLEPLQPPTDVSQDSRHMVLV 223
>gi|355756047|gb|EHH59794.1| hypothetical protein EGM_09988 [Macaca fascicularis]
Length = 776
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 59 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGG---DYGGTQYSLVVFNTV 115
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 116 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 171
Query: 120 QQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 172 MREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQIG 215
Query: 178 QCSVSLSVICPKQLPKLTAIYNAA 201
+ + S++ P++LP L ++ A
Sbjct: 216 ERGIHFSIVSPRKLPALRLLFEKA 239
>gi|428163987|gb|EKX33031.1| hypothetical protein GUITHDRAFT_120768 [Guillardia theta CCMP2712]
Length = 401
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
+Q+++ V+ T+ M PYW S+ Y I + + + E +LV F H Y
Sbjct: 10 RQVVLVVDSTSYMEPYWTSL---YKNCIYPALTYLDTRHKPDTILKTEYALVCFCDHAPY 66
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNV 123
++ + +T + +F W + F GGG+ A+ EGL AL +F +N +
Sbjct: 67 GDKTIKTNYFTNKLPLFDSWAKNVEFVGGGYAQNAVTEGLFAALELFP-----EKNSEGR 121
Query: 124 DGQRHCILVAASNPHPLP 141
+++ +L + S H +P
Sbjct: 122 SSEKYILLASNSRHHEIP 139
>gi|182627693|gb|ACB88866.1| mediator complex subunit MED25 variant MED25_i7 [Homo sapiens]
Length = 264
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 17 DVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNT 73
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQ 118
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 74 VDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFK 129
Query: 119 NQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 130 KMREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQI 173
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAA 201
+ + S++ P++LP L ++ A
Sbjct: 174 GERGIHFSIVSPRKLPALRLLFEKA 198
>gi|328874945|gb|EGG23310.1| hypothetical protein DFA_05442 [Dictyostelium fasciculatum]
Length = 1078
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 34/187 (18%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
+Q+I ++ TA M PY+ +I S YLE +++ L+ SN E L+ F + Y
Sbjct: 145 RQIIFIMDTTALMSPYFATIKSHYLEPLVQ-----SLSNSPEYKSNTEYGLIFFRDYPPY 199
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDA-AIAEGLSEALMMFSVAPNGSQNQQN 122
+V S T D+ L ++ F GGG+ A+ EGL AL + Q+
Sbjct: 200 SDYIVHSSSLTNDLQSILQCMTQTRFLGGGYASGNAVVEGLCSALKIA---------QRQ 250
Query: 123 VDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVS 182
++ IL++ S P P + L D +Q +
Sbjct: 251 TADEKCFILISNSIPRMSPCKL-------------------CNLGDCFDHINECIQKKIL 291
Query: 183 LSVICPK 189
LS ICPK
Sbjct: 292 LSFICPK 298
>gi|427780113|gb|JAA55508.1| Putative mediator complex subunit 25 [Rhipicephalus pulchellus]
Length = 1064
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 62/340 (18%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKT--SASNVELSLVTFNTHGSY 63
+++ VEGTA + PY +S+ S Y+ + F + + +++ +LV F S
Sbjct: 13 VVIVVEGTANLSPYVESLKSHYIVPTLEYFNGGPIDDRDCGYDSNSTTYALVVF--MASD 70
Query: 64 CA------CLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNG 116
CA C T +V L W + F GG G + + IAEGL AL +F
Sbjct: 71 CAPEPAAIC----HAPTTNVAKLLSWFDRVSFVGGAGESCSHIAEGLGTALQVFDDFQGL 126
Query: 117 SQNQQNVDGQRHCILVAASNPHPLPT---PVYRPQMQNLDQNENNEAQAESRLSDAETVA 173
+ V Q+HCILV S P+ LPT PVY E +A
Sbjct: 127 REPGAVV--QKHCILVCNSPPYRLPTLESPVYAGH-------------------SVEQLA 165
Query: 174 KSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARA 233
+ V+ S++ P+++P L +Y A + + A H ++L E
Sbjct: 166 TIMAERQVNFSILSPRKIPALYKLYEKAGGDLQTALCKNYAKDRRHMVLLRGYQLQE--- 222
Query: 234 ALSRPGVANLAPNQNPVKMDIAPVTSVTGP----APTSIPSVNGINRPPISVGNVP---- 285
RP +A ++ VK++ P S P +P + P+ G RP G P
Sbjct: 223 ---RPVSPPIAVSE--VKVEPTPSPSAVAPHNPRSPATTPAGVGQKRP---AGGSPPNPR 274
Query: 286 TATVKVEPST----VTSMVNGPTFPHIPSVPRPASQGVPS 321
A + +P++ +++M P P +P + A G+P+
Sbjct: 275 EAKMFKQPTSQASPISTMGGSPQQPQLPFQNQGARPGIPT 314
>gi|391337126|ref|XP_003742924.1| PREDICTED: uncharacterized protein LOC100900590 [Metaseiulus
occidentalis]
Length = 1082
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFC---VNELAGQKTSASNVELSLVTFNTHGS 62
+++ VE TA + P+ +SI ++Y+ + F ++ S N +L+TF S
Sbjct: 15 VVLLVEATANLFPFVESIKTNYIVPTLELFNGAPADDRDYGYDSIINCSYTLLTFTAADS 74
Query: 63 YC--ACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFS--VAPNGS 117
AC+ + T + L + FAGG + I EG++ AL +F A G
Sbjct: 75 APDPACIT-VTPPTSSIGKILSAFDKLLFAGGAAEQCSHITEGMATALQVFEDLSAFKGG 133
Query: 118 QNQQNVDGQRHCILVAASNPHPLPT-PVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
N +G +HCILV S P+ LP Q LDQ +A +
Sbjct: 134 ----NKEGSKHCILVCNSPPYQLPVLETMNFHGQTLDQ-----------------IAMTM 172
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAA 201
+ S+SL++ICP+++P+L ++ A
Sbjct: 173 QERSISLTIICPRKIPQLCKLFERA 197
>gi|427779951|gb|JAA55427.1| Putative mediator complex subunit 25 [Rhipicephalus pulchellus]
Length = 773
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 62/340 (18%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKT--SASNVELSLVTFNTHGSY 63
+++ VEGTA + PY +S+ S Y+ + F + + +++ +LV F S
Sbjct: 13 VVIVVEGTANLSPYVESLKSHYIVPTLEYFNGGPIDDRDCGYDSNSTTYALVVF--MASD 70
Query: 64 CA------CLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNG 116
CA C T +V L W + F GG G + + IAEGL AL +F
Sbjct: 71 CAPEPAAICHAP----TTNVAKLLSWFDRVSFVGGAGESCSHIAEGLGTALQVFDDFQGL 126
Query: 117 SQNQQNVDGQRHCILVAASNPHPLPT---PVYRPQMQNLDQNENNEAQAESRLSDAETVA 173
+ V Q+HCILV S P+ LPT PVY E +A
Sbjct: 127 REPGAVV--QKHCILVCNSPPYRLPTLESPVYAGH-------------------SVEQLA 165
Query: 174 KSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARA 233
+ V+ S++ P+++P L +Y A + + A H ++L E
Sbjct: 166 TIMAERQVNFSILSPRKIPALYKLYEKAGGDLQTALCKNYAKDRRHMVLLRGYQLQE--- 222
Query: 234 ALSRPGVANLAPNQNPVKMDIAPVTSVTGP----APTSIPSVNGINRPPISVGNVP---- 285
RP +A ++ VK++ P S P +P + P+ G RP G P
Sbjct: 223 ---RPVSPPIAVSE--VKVEPTPSPSAVAPHNPRSPATTPAGVGQKRP---AGGSPPNPR 274
Query: 286 TATVKVEPST----VTSMVNGPTFPHIPSVPRPASQGVPS 321
A + +P++ +++M P P +P + A G+P+
Sbjct: 275 EAKMFKQPTSQASPISTMGGSPQQPQLPFQNQGARPGIPT 314
>gi|241738340|ref|XP_002414075.1| med25 protein, putative [Ixodes scapularis]
gi|215507929|gb|EEC17383.1| med25 protein, putative [Ixodes scapularis]
Length = 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF----CVNELAGQKTSASNVELSLVTFNTH 60
+++ VEGTA + PY S+ S Y+ + F + G T+++ +LV F
Sbjct: 12 DVVIVVEGTANLSPYVDSLKSHYIVPTLEYFNGGPIDDRDCGYDTNSTT--YALVVFMAA 69
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
+ T +V L W + F GGG + IAEGL AL +F +
Sbjct: 70 DCATEPAATCNAPTTNVAKLLSWFDRVSFVGGGGESCSHIAEGLGTALQVFD--DFQALR 127
Query: 120 QQNVDGQRHCILVAASNPHPLP---TPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
+ +V Q+HC+LV S P+ LP +PVY +DQ +A
Sbjct: 128 EPSVVVQKHCVLVCNSPPYRLPSLESPVY--AGHTVDQ-----------------LAGIM 168
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAA 201
+ V+ S++ P+++P L +Y A
Sbjct: 169 AERQVNFSILSPRKIPALYKLYEKA 193
>gi|291231864|ref|XP_002735882.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Saccoglossus kowalevskii]
Length = 798
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 165/403 (40%), Gaps = 73/403 (18%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF----CVNELAGQKTSASNVELSLVTFNTHG 61
++ VEGTA + Y++ + + Y+ + F V N SLV +NT
Sbjct: 13 VVFVVEGTANLHAYFEYMKNSYILPTLEYFNGGPVVKYGDFGPKIGGNTFYSLVVYNTAD 72
Query: 62 SY----CACLVQRSGWTKDVDIFLHWLSTIPF-AGGGFNDAAIAEGLSEALMMFSVAPNG 116
C C + K +D F I F +G G + I+EGL AL +F +
Sbjct: 73 CAPNQSCICTDPTTKAWKLLDSF----DNIEFISGAGEKFSLISEGLGTALTLFDDMKSM 128
Query: 117 SQ-NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKS 175
Q + +V Q+HCIL+ S P+PLP+ E+ + L+ +E +A
Sbjct: 129 RQGHSTSVQVQKHCILICNSPPYPLPS---------------QESFHYNGLT-SEQLAAM 172
Query: 176 FVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLI---------SE 226
+ + LS++ P++LP+L +Y+ A + D + +P ++L+ +
Sbjct: 173 LAERGIHLSILSPRKLPELQKLYDKACGELQIV-ATRDYATDPRHMILLKGYQLAERTAA 231
Query: 227 NFMEAR-AALSRPG----VANLAPNQNPVKMD---------IAPVTSVTGPA----PTSI 268
N +A+ A+ +P A L Q V++ +A VT + PA P ++
Sbjct: 232 NITDAKEVAIVKPVPASPTAALKAVQEVVEIAQASQYKNPPVAQVTPMRWPADLQGPRAV 291
Query: 269 PSVNGINRPPI-SVGNVPTATVKVEP-----STVTSMVNGPTFPHIPSVPRPASQGVPSL 322
+ R P+ +V N+P T + + T++ +N T I SV RP
Sbjct: 292 AGIQATTRLPVPNVLNMPGVTTQQQQIADQIGTMSGSINQTTATQIQSV-RPQQDA---- 346
Query: 323 QTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPMAPAAANV 365
QT P S ++ GD + KP + R A NV
Sbjct: 347 QTQPPRS----IVWRGDLEWQEKPRGASQDPSARVTRSVACNV 385
>gi|182627697|gb|ACB88868.1| mediator complex subunit MED25 variant MED25_i9 [Homo sapiens]
Length = 260
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 17 DVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNT 73
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQ 118
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 74 VDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFK 129
Query: 119 NQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
+ GQ H C+L+ S P+ LP E+ S + E + +
Sbjct: 130 KMREQIGQTHRVCLLICNSPPYLLPA---------------VESTTYSGCT-TENLVQQI 173
Query: 177 VQCSVSLSVICPKQLPKLTAIYN 199
+ + S++ P++LP L ++
Sbjct: 174 GERGIHFSIVSPRKLPALRLLFE 196
>gi|194215800|ref|XP_001490066.2| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Equus caballus]
Length = 718
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 38 NELAGQKTSASNVELSLVTFNTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDA 97
NE G K + + SLV FNT VQ T F+ WL I F GGG
Sbjct: 26 NEEPGLKYGGT--QYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESC 83
Query: 98 A-IAEGLSEALMMFSVAPNGSQNQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQ 154
+ IAEGLS AL +F + + + GQ H C+L+ S P+ LP
Sbjct: 84 SLIAEGLSTALQLF----DDFKKMREQIGQTHRVCLLICNSPPYLLPA------------ 127
Query: 155 NENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRA----ADP 210
E+ S + E++ + + + S++ P++LP L ++ A P A P
Sbjct: 128 ---VESTTYSGYT-TESLVQKIGEQGIHFSIVSPRKLPALRLLFEKAA--PPAMLEPLQP 181
Query: 211 PVDNSKNPHFLVLI 224
P D S++P +VL+
Sbjct: 182 PTDVSQDPRHMVLV 195
>gi|119572936|gb|EAW52551.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast), isoform CRA_h [Homo sapiens]
Length = 224
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 17 DVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNT 73
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQ 118
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 74 VDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFK 129
Query: 119 NQQNVDGQRH--CILVAASNPHPLP 141
+ GQ H C+L+ S P+ LP
Sbjct: 130 KMREQIGQTHRVCLLICNSPPYLLP 154
>gi|194746434|ref|XP_001955685.1| GF16117 [Drosophila ananassae]
gi|190628722|gb|EDV44246.1| GF16117 [Drosophila ananassae]
Length = 861
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T +
Sbjct: 11 VVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAAN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F Q
Sbjct: 71 LLEPICSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDFAKHRQMID 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCIL+ S P+ +PT E+ + Q ++ E +A F + +
Sbjct: 131 QTSVQRHCILICNSPPYQMPT------------TESWKYQGKT----CEQLASMFNEQKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|195144870|ref|XP_002013419.1| GL23418 [Drosophila persimilis]
gi|194102362|gb|EDW24405.1| GL23418 [Drosophila persimilis]
Length = 861
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 28/241 (11%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTF 57
+S ++ +EG+A G Y + ++Y+ + F + ++ ++ +L V +
Sbjct: 6 LSLADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIADRFATLYGIVVY 65
Query: 58 NTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNG 116
T + + G + + +P GGG A +AEG + A F
Sbjct: 66 RTASNLLEPVCATYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFEDISER 125
Query: 117 SQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
Q + QRHCIL+ S P+ +P E+ + +S E +A F
Sbjct: 126 RQMLDQTNVQRHCILICNSPPYQMPV------------TESWKYLGKS----CEQLAGLF 169
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+ ++LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 170 NERKINLSIIAPRKMPILFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
Query: 234 A 234
A
Sbjct: 225 A 225
>gi|307206104|gb|EFN84184.1| Mediator of RNA polymerase II transcription subunit 25
[Harpegnathos saltator]
Length = 872
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS 62
+ +I +EGTA G Y + + Y+ + F + ++ + N H +
Sbjct: 10 QADVIFVIEGTAVNGAYLNDLKTSYVIPTLEYFSQGAIEDREYVSENSTTLYGIVVYHAA 69
Query: 63 YC--ACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQN 119
C A + G + L L + GG G + A I EGL+ L F +
Sbjct: 70 DCLPAPCTETFGPYSNPHKLLMMLDKLEMIGGKGESYANIGEGLATGLQCFEDL--QLKR 127
Query: 120 QQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQC 179
+ N Q+HCIL+ S P Y+ +Q + + E +A + +
Sbjct: 128 EPNTASQKHCILICNS-------PPYQIMIQETYKFAGH---------TTEQLAAIYQER 171
Query: 180 SVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAA----- 234
++++S++ P+++P L ++ A + +A+ + +K+P LVL+ ++ R+
Sbjct: 172 NINISILSPRKIPALFKLFEKAGGDLKASQKK-NYAKDPRHLVLLHNYNLKERSVSPAIG 230
Query: 235 --------------LSRPGVANLAPNQNPVKMDIAPVTSVTGP-----APTSIPSVNGI 274
LS P +N +PN N V+ +IAP GP AP +I SV+ +
Sbjct: 231 GNVHNTAATTAQIPLS-PLQSNDSPNTNQVQQNIAPPNQPQGPPFRNQAPQNITSVHPV 288
>gi|198452548|ref|XP_002137496.1| GA26511 [Drosophila pseudoobscura pseudoobscura]
gi|198131975|gb|EDY68054.1| GA26511 [Drosophila pseudoobscura pseudoobscura]
Length = 859
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 28/241 (11%)
Query: 1 MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTF 57
+S ++ +EG+A G Y + ++Y+ + F + ++ + +L V +
Sbjct: 6 LSLADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVY 65
Query: 58 NTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNG 116
T + + G + + +P GGG A +AEG + A F
Sbjct: 66 RTASNLLEPVCATYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFEDISER 125
Query: 117 SQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSF 176
Q + QRHCIL+ S P+ +P E+ + +S E +A F
Sbjct: 126 RQMLDQTNVQRHCILICNSPPYQMPV------------TESWKYLGKS----CEQLAGLF 169
Query: 177 VQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+ ++LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 170 NERKINLSIIAPRKMPILFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
Query: 234 A 234
A
Sbjct: 225 A 225
>gi|195356276|ref|XP_002044605.1| GM17687 [Drosophila sechellia]
gi|194132304|gb|EDW53882.1| GM17687 [Drosophila sechellia]
Length = 856
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T +
Sbjct: 11 VVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAAN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F Q
Sbjct: 71 LLEPVCSTYGPFMQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLLD 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCIL+ S P+ +PT E+ + +S E +A F + +
Sbjct: 131 QTSVQRHCILICNSPPYQMPT------------TESWKYPGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|443712406|gb|ELU05747.1| hypothetical protein CAPTEDRAFT_200045 [Capitella teleta]
Length = 719
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVN--ELAGQKTSASNVELSLVTFNTHGSY 63
++ VE +A +G Y++++ S Y+ I F E + S +LVT+
Sbjct: 99 VVFVVESSANVGAYFETLKSSYILPAIEHFNGGPPEAVDYGCNYSCSLYTLVTYCADDHA 158
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA--IAEGLSEALMMFSVAPNGSQNQQ 121
S T F+ L I F+GG + D + IAEGLS AL +F +
Sbjct: 159 PGLAASCSSPTTSAQEFIQRLDNIEFSGG-YGDLSYQIAEGLSTALQVFDDV--NQLREP 215
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
NV+ Q+HC+L++ S TPV P +N+ + L D + + + V
Sbjct: 216 NVNAQKHCVLISNS------TPVQVPCQENI--------KFAGLLPDQ--LLTNLAEIGV 259
Query: 182 SLSVICPKQLPKLTAIYNAA 201
+ S+I P+++P L ++ A
Sbjct: 260 NFSIISPRKIPLLFKLFEKA 279
>gi|195498090|ref|XP_002096376.1| GE25639 [Drosophila yakuba]
gi|194182477|gb|EDW96088.1| GE25639 [Drosophila yakuba]
Length = 855
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T +
Sbjct: 11 VVFIIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAAN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F Q
Sbjct: 71 LLEPVCSTYGPFLQPQKVMETIDRLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLLD 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCIL+ S P+ +PT E+ + +S E +A F + +
Sbjct: 131 QTSVQRHCILICNSPPYQMPT------------TESWKYPGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|170065891|ref|XP_001868059.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167862631|gb|EDS26014.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1039
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 29/236 (12%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELA----GQKTSASNVELSLVTFNTH 60
+++ +EGTA G Y + S+Y+ + F + + G T + + +VT+ T
Sbjct: 4 EILFVIEGTAINGAYINDMKSNYIIPTLEYFSQSTVGDCFDGYATDKNGNQYGVVTYKTA 63
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQN 119
S G L + + +GG ++A +AEGL+ AL+ F +N
Sbjct: 64 QSLPGVCCTTFGPYNSAHKVLGAIDRLELSGGKSESNANLAEGLATALVCFDDFDEMREN 123
Query: 120 Q-QNVDGQRHCILVAASNPHPLP-TPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
Q V ++CIL+AAS+P+ + T Y + +N++Q + F
Sbjct: 124 TGQKV--HKYCILIAASSPYSMYVTECYAYENKNVEQ-----------------LVALFQ 164
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDN-SKNPHFLVLISENFMEAR 232
+ +++LS+I P+++P L ++ + + ++ + N K+P LVL+ ++ R
Sbjct: 165 EKNINLSIISPRKIPILFKLFEKSGGDLSSSS--IKNYCKDPRHLVLLKGFSLKER 218
>gi|21356325|ref|NP_650854.1| mediator complex subunit 25 [Drosophila melanogaster]
gi|74868527|sp|Q9VDR1.1|MED25_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
25; AltName: Full=Mediator complex subunit 25; AltName:
Full=dmPTOV2
gi|7300577|gb|AAF55729.1| mediator complex subunit 25 [Drosophila melanogaster]
gi|17862076|gb|AAL39515.1| LD07688p [Drosophila melanogaster]
gi|220942948|gb|ACL84017.1| MED25-PA [synthetic construct]
Length = 863
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T +
Sbjct: 11 VVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAAN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F Q
Sbjct: 71 LLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLLD 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCIL+ S P+ +PT E+ + +S E +A F + +
Sbjct: 131 QTSVQRHCILICNSPPYQMPT------------TESWKYPGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|194899855|ref|XP_001979473.1| GG23647 [Drosophila erecta]
gi|190651176|gb|EDV48431.1| GG23647 [Drosophila erecta]
Length = 851
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T +
Sbjct: 11 VVFIIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAAN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F Q
Sbjct: 71 LLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLLD 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
QRHCIL+ S P+ +PT E+ + +S E +A F + +
Sbjct: 131 QTSVQRHCILICNSPPYQMPT------------TESWKYPGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|195569554|ref|XP_002102774.1| GD19328 [Drosophila simulans]
gi|194198701|gb|EDX12277.1| GD19328 [Drosophila simulans]
Length = 515
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 28/236 (11%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHG 61
++ +EG+A G Y + ++Y+ + F + ++ + +L V + T
Sbjct: 10 DVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAA 69
Query: 62 SYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQNQ 120
+ + G + + +P GGG A +AEG + A F Q
Sbjct: 70 NLLEPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLL 129
Query: 121 QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180
QRHCIL+ S P+ +PT E+ + +S E +A F +
Sbjct: 130 DQTSVQRHCILICNSPPYQMPT------------TESWKYPGKS----CEQLAALFNERK 173
Query: 181 VSLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
++LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 174 INLSIIAPRKMPVLFKLFMKAD-----GDQPITSKNYAKNIRHLVLLKGYSLKERA 224
>gi|242011699|ref|XP_002426584.1| transcription factor, putative [Pediculus humanus corporis]
gi|212510733|gb|EEB13846.1| transcription factor, putative [Pediculus humanus corporis]
Length = 886
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 29/237 (12%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQK--TSASNVELSLVTFNTH 60
+ ++ +EGTA G Y + ++YL + F L + ++ LV ++
Sbjct: 11 QADIVFVIEGTAINGAYLNDLKTNYLLPTLEYFSQGNLEDRDYVCEGTSTLYGLVVYHAA 70
Query: 61 G----SYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPN 115
S C C S K L L + GG G + A IAEGL+ AL F
Sbjct: 71 DILPKSSCDCYGPYSSPQK----LLMTLDKLELIGGKGESHANIAEGLATALQAFEDLQQ 126
Query: 116 GSQNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKS 175
+ N+ Q+HCILV S P+ +P EA S + + +A
Sbjct: 127 KREGN-NIITQKHCILVCNSPPYFMPV---------------MEASTYSGHT-IDQLAAI 169
Query: 176 FVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR 232
+ +++LS++ P+++P + ++ A + + + +K+P LVL+ ++ R
Sbjct: 170 LNEQNINLSILSPRKIPAIFKLFEKAGGDLTQSQNK-NYAKDPRHLVLLKGFSLKER 225
>gi|182627699|gb|ACB88869.1| mediator complex subunit MED25 variant MED25_i10 [Homo sapiens]
Length = 233
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ +EGTA +GPY++ + YL I F + G + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDY---GGTQYSLVVFNTV 74
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGSQN 119
VQ T F+ WL I F GGG + IAEGLS AL +F + +
Sbjct: 75 DCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF----DDFKK 130
Query: 120 QQNVDGQRH--CILVAAS 135
+ GQ H C+L+ S
Sbjct: 131 MREQIGQTHRVCLLICNS 148
>gi|357507397|ref|XP_003623987.1| PHYTOCHROME AND FLOWERING TIME [Medicago truncatula]
gi|355499002|gb|AES80205.1| PHYTOCHROME AND FLOWERING TIME [Medicago truncatula]
Length = 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 11/71 (15%)
Query: 527 TPGMSQQ-AQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPV 585
T GM QQ +S MQPL N+ TA +QQT+S S+QSKY + W+GSL+ RQGQ V
Sbjct: 40 TTGMPQQEVESDMQPLE-NDATA-----AQQTAS---SAQSKYTRFWKGSLTELRQGQRV 90
Query: 586 FITKLEVCSQT 596
ITKLE CS++
Sbjct: 91 LITKLE-CSRS 100
>gi|414591834|tpg|DAA42405.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 1052
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 19/95 (20%)
Query: 501 GISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSA 560
G S N + G S +++ + + GM QQA +G +A+N+ +
Sbjct: 736 GGSFGSNTRTAWGNSDMAAASSSQPDRMGMDQQAGTG---------SAMNLTI------G 780
Query: 561 LHSSQS----KYVKVWEGSLSGQRQGQPVFITKLE 591
LH + KYVK+WEG L GQRQGQPVFI+KLE
Sbjct: 781 LHPNAQQPPPKYVKIWEGDLYGQRQGQPVFISKLE 815
>gi|91081567|ref|XP_975178.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270006185|gb|EFA02633.1| hypothetical protein TcasGA2_TC008353 [Tribolium castaneum]
Length = 861
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 32/265 (12%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQK--TSASNVELSLVTFNTHGSY 63
++ +EGTA G Y + ++Y+ + F + + N +V +
Sbjct: 14 IVFVIEGTAVNGAYINDLKTNYIIPSLEYFSQGSIDESSFLSEGINSYYGIVVYQA---- 69
Query: 64 CACLVQRSGWTKDVDI----FLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
CL S T + L+ + + GG G + A IAEGL+ L F
Sbjct: 70 ADCLPHPSSDTIGPFVSPSKVLNAIDKLELIGGKGESHANIAEGLATTLQCFDELQQKRD 129
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
N N+ Q+HCILV S P+ L V+ E A + + AE +A +
Sbjct: 130 NNGNI--QKHCILVCNSPPYSLG--VF-------------ETHAYTGKT-AEQLAAILQE 171
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRP 238
+++LS+I P+++P L ++ A + +A + +K+P LVL+ ++ R
Sbjct: 172 KNINLSIISPRKIPSLYKLFEKAGGD-LSASQTKNYAKDPRHLVLLRGFSLKERPLSPPA 230
Query: 239 GVANLAPNQNPVKMDIAPVTSVTGP 263
G A A Q + P+TS+ P
Sbjct: 231 GTATSA--QTQISNTTIPITSLPSP 253
>gi|390357260|ref|XP_001180359.2| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Strongylocentrotus purpuratus]
Length = 308
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 22/250 (8%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVE--LSLVTFNTHGS 62
++ +EG A++G Y+ + +Y+ + F L + + SLV FN+
Sbjct: 11 DVVFVIEGNASLGAYFDELKGNYILPTLVHFNGGPLIDSDFTGDYEKTVFSLVVFNSVDC 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPF-AGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
+ + + T + F+ L I F GGG + + +AEGL A+ +F + +
Sbjct: 71 FPGPAISCTTPTSNAKEFMRTLDKILFIGGGGESHSLLAEGLGGAMQIFDHMKIRREART 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+D + CIL+ S P +P E S + AE +A + +V
Sbjct: 131 KID--KMCILITNSPPFSIPA---------------MECGHYSGYT-AEQLAVLMGERNV 172
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241
+LS++ P++L L +Y+ + + P D +K+ L+L+ ++ R S+ +
Sbjct: 173 NLSIMSPRKLGVLQRLYDKSCAELQVV-PSKDYAKDERHLILLKGFELQERVPESKESIK 231
Query: 242 NLAPNQNPVK 251
+ N +P +
Sbjct: 232 QVPGNASPRR 241
>gi|383857208|ref|XP_003704097.1| PREDICTED: uncharacterized protein LOC100878374 [Megachile
rotundata]
Length = 892
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 46/297 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA G Y + ++YL + F + ++ + S +V ++
Sbjct: 11 QADVIFVIEGTAVNGAYLNDLKTNYLIPTLEYFSQGGIEDREYVSEQNSTTLYGIVVYHA 70
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L I GG G A I EGL+ L F +
Sbjct: 71 ADCLPAPCTETFGPYANPHKLLLILDKIEMVGGKGECFANIGEGLATGLQCFEDL--QLR 128
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ + Q+HCIL+ S P Y+ +Q + N E +A + +
Sbjct: 129 REPSTASQKHCILICNS-------PPYQTVIQESYKFSGN---------TIEQLAVLYQE 172
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR------ 232
+++LS++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 173 RNINLSILSPRKIPALFKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPTI 231
Query: 233 --AALSRPGVA----------NLAPNQNPVKMDIAPVTSVTGP-----APTSIPSVN 272
A + PG A N +PN N V +I+ GP P SI SV+
Sbjct: 232 GGAVHTTPGTAAQIPLSPLQSNDSPNTNQVPQNISQSNQSQGPTFRNQTPQSITSVH 288
>gi|195036414|ref|XP_001989665.1| GH18669 [Drosophila grimshawi]
gi|193893861|gb|EDV92727.1| GH18669 [Drosophila grimshawi]
Length = 858
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFC---VNELAGQKTSASNVELSLVTFNTHGS 62
++ +E +A G Y + ++Y+ + F ++E + +VT+ T +
Sbjct: 11 VVFVIENSAINGAYLNELKTNYILPTLEHFTQGSIDEREFLIAERYSTLYGIVTYRTASN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFN-DAAIAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A ++EG + A F +
Sbjct: 71 LLEPVCSTYGPFVQPQKVIETIERLPLVGGGMESHAHMSEGFAAAHGCFDEMNKQRYMLE 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+ QRHCIL+ S P+ + NE+ + + +S E +A F + +
Sbjct: 131 QSNLQRHCILICNSPPY------------QMSVNESWKYKGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L +Y A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLYMKAD-----GDQPITTKNYAKNIRHLVLLKGYSLKERA 224
>gi|322790270|gb|EFZ15269.1| hypothetical protein SINV_11494 [Solenopsis invicta]
Length = 1213
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 46/294 (15%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSYC- 64
+I +EGTA G Y + ++Y+ + F + ++ + N H + C
Sbjct: 14 VIFVIEGTAVNGAYLNDLKTNYVIPTLEYFSQGGIEDREYVSENSTTLYGIVVYHAADCL 73
Query: 65 -ACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQNQQN 122
+ + G + L L + GG G + A I EGL+ L F + + N
Sbjct: 74 PSPCTETLGPYSNPHKLLMVLEKLEMVGGKGESFANIGEGLATGLQCFEDL--QLRREPN 131
Query: 123 VDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVS 182
Q+HCIL+ S P+ Q + Q A E +A + + +++
Sbjct: 132 TASQKHCILICNSPPY-----------QTMIQETYKFAG-----HTIEQLAAIYQERNIN 175
Query: 183 LSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR----- 237
+S++ P+++P L ++ A + +++ + +K+P LVL+ ++ R +
Sbjct: 176 ISILSPRKIPALYKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPQMGGNV 234
Query: 238 -------------PGVANLAPNQNPVKMDIAPVTSVTGP------APTSIPSVN 272
P +N +PN N V+ IAP GP P +IPSV+
Sbjct: 235 HNTATTAAQIPLSPLQSNDSPNTNQVQQSIAPPNQQQGPPFRNQAPPQNIPSVH 288
>gi|195108487|ref|XP_001998824.1| GI24180 [Drosophila mojavensis]
gi|193915418|gb|EDW14285.1| GI24180 [Drosophila mojavensis]
Length = 854
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFC---VNELAGQKTSASNVELSLVTFNTHGS 62
++ +E +A G Y + ++Y+ + F ++E +VT+ T +
Sbjct: 11 VVFVIENSAINGAYLNELKTNYILPTLEHFTQGSIDEREFLIAERYATLYGIVTYRTASN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFN-DAAIAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F +
Sbjct: 71 LLEPVCTTYGPFVQPQKVIETIERLPLVGGGMESHAHMAEGFAAAHGCFDDISEQRHIME 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+ QRHCIL+ S P+ + NE+ + + +S E +A F + +
Sbjct: 131 QGNIQRHCILICNSPPY------------QMSVNESWKYKGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFIKAD-----GDQPITTKNYAKNIRHLVLLKGYSLKERA 224
>gi|281207772|gb|EFA81952.1| putative mediator complex subunit 25 [Polysphondylium pallidum
PN500]
Length = 1994
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 4 KQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGSY 63
KQ+I ++ TA M ++ ++ S YL+ + + + + ++ N++ L+ F + Y
Sbjct: 630 KQVIFIMDTTAMMSHFFPTLKSTYLDPL-------KASLESSTDMNIDYGLIFFRDYPPY 682
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGF-NDAAIAEGLSEALMMFSVAPNGSQNQQN 122
+V S T ++ + + F GGGF N A+AEGL AL + S +++
Sbjct: 683 ADYIVNPSELTNNLTKLFNCMVNTKFVGGGFTNGNAVAEGLCSALRISS--------RKS 734
Query: 123 VDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVS 182
D ++ IL++ S P P + L D +Q +
Sbjct: 735 AD-EKSFILISNSQPRISPCKL-------------------CNLGDCYRHIDECIQQKIM 774
Query: 183 LSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVL 223
LS ICP+ K N ++RN + S NP+F+ L
Sbjct: 775 LSFICPQ---KNQFTKNISERNGYEFEDLTIES-NPNFVRL 811
>gi|195394489|ref|XP_002055875.1| GJ10527 [Drosophila virilis]
gi|194142584|gb|EDW58987.1| GJ10527 [Drosophila virilis]
Length = 860
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFC---VNELAGQKTSASNVELSLVTFNTHGS 62
++ +E +A G Y + ++Y+ + F ++E +VT+ T +
Sbjct: 11 VVFVIENSAINGAYLNELKTNYVLPTLEHFTQGSIDEREFLIAERYATLYGIVTYRTASN 70
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFN-DAAIAEGLSEALMMFSVAPNGSQNQQ 121
+ G + + +P GGG A +AEG + A F +
Sbjct: 71 LLEPVCTTYGPFVQPQKVIETIERLPLVGGGMESHAHMAEGFAAAHGCFDEINEQRHILE 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181
+ QRHCIL+ S P+ + NE+ + + +S E +A F + +
Sbjct: 131 QANLQRHCILICNSPPYQMSV------------NESWKYKGKS----CEQLAALFNERKI 174
Query: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPV---DNSKNPHFLVLISENFMEARA 233
+LS+I P+++P L ++ A D P+ + +KN LVL+ ++ RA
Sbjct: 175 NLSIIAPRKMPVLFKLFMKAD-----GDQPITTKNYAKNIRHLVLLKGYSLKERA 224
>gi|345490521|ref|XP_001605748.2| PREDICTED: hypothetical protein LOC100122146 [Nasonia vitripennis]
Length = 953
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSL---VTFNTHGS 62
++ +E TA G Y ++YL + F + + AS L+L V ++
Sbjct: 14 VVFVIESTATNGAYLNDFKTNYLVPTLEYFSQGGIE-DREFASETSLTLYGIVVYHAADC 72
Query: 63 YCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQNQQ 121
A Q G + L L + GG G + A I EGL+ AL F + +
Sbjct: 73 LPAPFTQAYGPFSNPHKLLLTLEKLEMIGGKGESHANIGEGLATALHCFEDL--QGRREP 130
Query: 122 NVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLS--DAETVAKSFVQC 179
NV Q+HC+LV S P+ + Q S+ S E +A F +
Sbjct: 131 NVATQKHCVLVCNSPPYQI------------------GVQESSKYSGFSVEQLAALFPEN 172
Query: 180 SVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISE-NFMEARAALSRP 238
+VSLS++ P+++ L ++ A + +++ + +K+P LVL+ N E+ +
Sbjct: 173 NVSLSILSPRKISALFKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKESPVTAAVS 231
Query: 239 GVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSV 271
G + A ++ ++P+ S P P P +
Sbjct: 232 GTPSAA------QIALSPLQSNDSPNPNQTPQI 258
>gi|198436495|ref|XP_002123618.1| PREDICTED: similar to mediator of RNA polymerase II transcription,
subunit 25 [Ciona intestinalis]
Length = 839
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 153/371 (41%), Gaps = 61/371 (16%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNT 59
++++ VE T+ M +W + Y+ + F +EL TSA+ LV F+
Sbjct: 12 EVVIVVEATSNMVSHWDLLKKQYILPAVNHFHQQTNTSDELF---TSANGNRYGLVLFHA 68
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFND-AAIAEGLSEALMMFSVAPNGSQ 118
L Q T++V F+ L I F GGG + I EGL+ +L +F+ +G+Q
Sbjct: 69 ADVVPQSLSQCFPPTRNVHTFIKTLDAIKFGGGGGEQYSHINEGLATSLQLFNEF-SGTQ 127
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ V + C +V+ + P+ LP V + L N+ + +
Sbjct: 128 SDPQVT--KLCFIVSNTPPYQLPC-VESFEYAGLTLNQ---------------ITDKLSE 169
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDN-SKNPHFLVLISENFMEARAALSR 237
VS+SVI P+ + +L ++ N P + N +++ LVLIS
Sbjct: 170 NGVSISVISPRNIVELQQVFLRGNSN----QPSLMNYAQDRRHLVLIS--------GFRL 217
Query: 238 PGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG-----INRPPISV---GNVPTATV 289
P P V +I V S P V+G IN+P V ++PT +
Sbjct: 218 PTERERVPVTEIVPENIVSVKKEDTMMEVSSPVVDGSSDLQINQPEAPVIPNTSLPTESS 277
Query: 290 KVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTS-SPSSTSQEMITSGDSVPEVKPLV 348
+ S++ + T +V A+Q + Q S +PSS Q M+T+ +
Sbjct: 278 QFNTSSMQPITVSDTMTKTSAV---ATQNIQPQQISQTPSSMMQPMLTTAST-------- 326
Query: 349 SGMSQPLRPMA 359
S ++ P+R +A
Sbjct: 327 SSVTNPIRNIA 337
>gi|340722707|ref|XP_003399745.1| PREDICTED: hypothetical protein LOC100648529 [Bombus terrestris]
Length = 884
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 46/297 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA G Y + ++YL + F + ++ + S +V ++
Sbjct: 11 QADVIFVIEGTAVNGAYLNDLKTNYLTPTLEYFSQGGIEDREYVSEQNSTTLYGIVVYHA 70
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L + GG G A I EGL+ L F +
Sbjct: 71 ADCLPAPCTETFGPYANPHKLLLVLEKLEMVGGKGECFANIGEGLATGLQCFEDL--QLR 128
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ N Q+HCIL+ S P+ Q + Q A E +A + +
Sbjct: 129 REPNTASQKHCILICNSPPY-----------QTVIQESYKFAG-----HTIEQLASLYQE 172
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR------ 232
+++LS++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 173 RNINLSILSPRKIPALFKLFEKAGGDLQSSQ-TKNYAKDPRHLVLLRNYNLKERPVSPTI 231
Query: 233 --AALSRPGVA----------NLAPNQNPVKMDIAPVTSVTGP-----APTSIPSVN 272
A + PG A N +PN N V+ +IA T GP P +I SV+
Sbjct: 232 GGAVHTTPGTAAQIPLSPLQSNDSPNTNQVQQNIAQPTQPQGPPFRGQTPQNIASVH 288
>gi|350424265|ref|XP_003493739.1| PREDICTED: hypothetical protein LOC100746074 [Bombus impatiens]
Length = 886
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 46/297 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA G Y + ++YL + F + ++ + S +V ++
Sbjct: 11 QADVIFVIEGTAVNGAYLNDLKTNYLTPTLEYFSQGGIEDREYVSEQNSTTLYGIVVYHA 70
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L + GG G A I EGL+ L F +
Sbjct: 71 ADCLPAPCTETFGPYANPHKLLLVLEKLEMVGGKGECFANIGEGLATGLQCFEDL--QLR 128
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ N Q+HCIL+ S P+ Q + Q A E +A + +
Sbjct: 129 REPNTASQKHCILICNSPPY-----------QTVIQESYKFAG-----HTIEQLASLYQE 172
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR------ 232
+++LS++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 173 RNINLSILSPRKIPALFKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPTI 231
Query: 233 --AALSRPGVA----------NLAPNQNPVKMDIAPVTSVTGP-----APTSIPSVN 272
A + PG A N +PN N V+ +IA T GP P +I SV+
Sbjct: 232 GGAVHTTPGTAAQIPLSPLQSNDSPNTNQVQQNIAQPTQPQGPPFRGQTPQNIASVH 288
>gi|321461458|gb|EFX72490.1| hypothetical protein DAPPUDRAFT_227538 [Daphnia pulex]
Length = 693
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 42/218 (19%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-----CVNELAGQKTSASNVELSLVTFNTH 60
++ VEGTAA G Y I +Y+ + + F + G +T A+ SLV +++
Sbjct: 13 IVFLVEGTAACGAYMNEIKMNYICQTVEYFNGGPIVEDRDCGSETFAT--LYSLVVYHSS 70
Query: 61 GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFND-AAIAEGLSEALMMFSVAPNGSQN 119
A +V G ++ FL L + F+GG A++ EGL+ L F
Sbjct: 71 DCLPADMVDVYGPFRNPHKFLQLLDKLDFSGGHAEHMASLTEGLATTLECFKDL--TLLR 128
Query: 120 QQNVDGQRHCILVAASNPHPLPT---PVYRPQMQNLDQ-----NENNEAQAESRLSDAET 171
+ Q+ CIL+ S P+ LP P +R L+Q NENN
Sbjct: 129 DPGLKAQKFCILICNSPPYNLPVMDLPSFRG--LTLEQLAVLVNENN------------- 173
Query: 172 VAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAAD 209
+ LS+I P+++P +++ A + AA+
Sbjct: 174 ---------IQLSIISPRRIPTWINLFDKAGGDSMAAN 202
>gi|307183320|gb|EFN70189.1| Mediator of RNA polymerase II transcription subunit 25 [Camponotus
floridanus]
Length = 388
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS 62
+ +I +EGTA G Y + ++YL + F + ++ + N H +
Sbjct: 11 QADVIFVIEGTAVNGAYLNDLKTNYLIPTLEYFSQGGIEDREYVSENSTTLYGIVVYHAA 70
Query: 63 YC--ACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQN 119
C + + G + L L + GG G + A I EGL+ L F +
Sbjct: 71 DCLPSPCTETFGPYSNPHKLLVVLDKLEMVGGKGESCANIGEGLATGLQCFEDL--QLRR 128
Query: 120 QQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQC 179
+ N Q+HCIL+ S P Y+ +Q E+ + + E +A + +
Sbjct: 129 EPNTASQKHCILICNS-------PPYQIMIQ-----ESYKFAGHT----IEQLAAIYQER 172
Query: 180 SVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSR-- 237
++++S++ P+++P L ++ A + +++ + +K+P LVL+ ++ R +
Sbjct: 173 NINISILSPRKIPALYKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPQMG 231
Query: 238 ---------------PGVANLAPNQNPVKMDIAPVTSVTGPA 264
P +N +PN N V+ +IAP PA
Sbjct: 232 GNVHNTSSVTQIPLSPLQSNDSPNTNQVQQNIAPPNQQQSPA 273
>gi|149056012|gb|EDM07443.1| mediator of RNA polymerase II transcription, subunit 25 homolog
(yeast) (predicted), isoform CRA_a [Rattus norvegicus]
Length = 135
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 6 LIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSAS--NVELSLVTFNTHGSY 63
++ +EGTA +GPY++ + YL I F A + SLV FNT
Sbjct: 18 VVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGDYGGTQYSLVVFNTVDCA 77
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMF 110
VQ T F+ WL I F GGG + IAEGLS AL +F
Sbjct: 78 PESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLSTALQLF 125
>gi|313239745|emb|CBY14629.1| unnamed protein product [Oikopleura dioica]
Length = 587
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 40/277 (14%)
Query: 2 SEKQLIV-AVEGTAAMGPYWQSIVSDYLEKIIRCF--CVNELAGQKTSASNVELSLVTFN 58
EK+++V V+GTA + PYW+ + +Y+ I N +GQ +S + +
Sbjct: 10 DEKKMVVFCVDGTAGLAPYWKQMKRNYIRPAIEALQDLKNIESGQYSSTCFATVVYGAGD 69
Query: 59 THGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAA-IAEGLSEALMMFSVAPNGS 117
G C+ + T I L L + GGGF + E S AL + G+
Sbjct: 70 GFGGPYNCIKEFED-TLQPKIVLQDLEELELHGGGFERRTHLVEAFSVALTIL-----GT 123
Query: 118 QNQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFV 177
N G++H +++ S+ Y ++ N+ NN+ +S E + ++ V
Sbjct: 124 SN----AGEKHIVIITNSD-------FYETKVNNI----NNDYYKKS----LEQLVQASV 164
Query: 178 QCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVL---ISENFMEARAA 234
+SVI P+ + L ++N++ P N + H ++L + EN + +
Sbjct: 165 AFQAKVSVIAPRVINSLKNLFNSSNFE---GSPSQGNKIDGHHMILTHFVMENQPDPPQS 221
Query: 235 LSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSV 271
+ A P + VK ++ T P+ ++P +
Sbjct: 222 IESQRQAAATPPKEEVKAEVK-----TEPSSEALPQI 253
>gi|170065893|ref|XP_001868060.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167862632|gb|EDS26015.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 556
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 5 QLIVAVEGTAAMGPYWQSIVSDYLEKIIRCF-------CVNELAGQKTSASNVELSLVTF 57
+++ +EGTA G Y + S+Y+ + F C + G T + + +VT+
Sbjct: 4 EILFVIEGTAINGAYINDMKSNYIIPTLEYFSQSTVGDCFD---GYATDKNGNQYGVVTY 60
Query: 58 NTHGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNG 116
T S G L + + +GG ++A +AEGL+ AL+ F
Sbjct: 61 KTAQSLPGVCCTTFGPYNSAHKVLGAIDRLELSGGKSESNANLAEGLATALVCFDDFDEM 120
Query: 117 SQNQ-QNVDGQRHCILVAASNPHPLP-TPVYRPQMQNLDQNENNEAQAESRLSDAETVAK 174
+N Q V ++CIL+AAS+P+ + T Y + +N++Q +
Sbjct: 121 RENTGQKV--HKYCILIAASSPYSMYVTECYAYENKNVEQ-----------------LVA 161
Query: 175 SFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDN-SKNPHFLVLISENFMEAR 232
F + +++LS+I P+++P L ++ K + + N K+P LVL+ ++ R
Sbjct: 162 LFQEKNINLSIISPRKIPILFKLFE--KSGGDLSSSSIKNYCKDPRHLVLLKGFSLKER 218
>gi|66559545|ref|XP_395016.2| PREDICTED: hypothetical protein LOC411545 [Apis mellifera]
Length = 915
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 46/297 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA G Y + ++YL + F + ++ + S +V ++
Sbjct: 28 QADVIFVIEGTAVNGAYLNDLKTNYLTPTLEYFSQGGIEDREYVSEQNSTTLYGIVVYHA 87
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L + GG G A I EGL+ L F +
Sbjct: 88 ADCLPAPCTETFGPYANPHKLLLVLEKLEMVGGKGECFANIGEGLATGLQCFEDL--QLR 145
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ N Q+HCIL+ S P+ Q + Q A E +A + +
Sbjct: 146 REPNTAPQKHCILICNSPPY-----------QTVIQESYKFAG-----HTIEQLATLYQE 189
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR------ 232
+++LS++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 190 RNINLSILSPRKIPALFKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPTI 248
Query: 233 --AALSRPGVA----------NLAPNQNPVKMDIAPVTSVTG-----PAPTSIPSVN 272
A + G A N +PN N V+ IA T G P P +I SV+
Sbjct: 249 GGAVHNTSGTAAQIPLSPLQSNDSPNTNQVQQSIAQPTQSQGPPFRNPTPQNISSVH 305
>gi|444705733|gb|ELW47124.1| Mediator of RNA polymerase II transcription subunit 25 [Tupaia
chinensis]
Length = 645
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 89 FAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRH--CILVAASNPHPLPTPVYR 146
GGG + + IAEGLS AL +F + + + GQ H C+L+ S P+ LP
Sbjct: 4 MGGGGESCSLIAEGLSTALQLF----DDFKKMREQIGQTHRVCLLICNSPPYLLPA---- 55
Query: 147 PQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPR 206
E+ S + E++ + + + S++ P++LP L ++ A P
Sbjct: 56 -----------VESTTYSGCT-TESLVQKIGERGIHFSIVSPRKLPALRLLFEKAA--PP 101
Query: 207 A----ADPPVDNSKNPHFLVLISENFMEARAALSRPGVANLAPNQNPVKMDIAPVTSVT 261
A PP D S++P +VL+ + S PG L P Q PV + AP + T
Sbjct: 102 AMLEPLQPPADVSQDPRHMVLVRGLVLPVGGG-SAPG--PLQPKQ-PVSLPSAPTSGAT 156
>gi|307207972|gb|EFN85531.1| Mediator of RNA polymerase II transcription subunit 25
[Harpegnathos saltator]
Length = 879
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA Y + + Y+ + F + ++ + S +V ++
Sbjct: 11 QADVIFVIEGTAVNSAYLNDLKASYIIPTLEYFNQGGIEDREYISEQNSTTLYGIVVYHA 70
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L + GG G + A I EGL+ L F +
Sbjct: 71 ADCLPAPSTETFGPYTNPHKVLVILDKLEMVGGKGESYANIGEGLATGLQCFEDL--QLK 128
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ N Q+HCIL+ S P Y+ +Q + + E +A + +
Sbjct: 129 REPNTASQKHCILICNS-------PPYQIMIQECYKFAGH---------TIEQLATIYQE 172
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAA---- 234
++++S++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 173 RNINISILSPRKIPALFKLFEKAGGDLQSSQKK-NYAKDPRHLVLLRNYNLKERPVSPAT 231
Query: 235 ---------------LSRPGVANLAPNQNPVKMDIAP 256
LS P +N +PN N V+ +IAP
Sbjct: 232 GGNVHNTTATAAQIPLS-PLQSNDSPNTNQVQQNIAP 267
>gi|357488419|ref|XP_003614497.1| PHYTOCHROME AND FLOWERING TIME [Medicago truncatula]
gi|355515832|gb|AES97455.1| PHYTOCHROME AND FLOWERING TIME [Medicago truncatula]
Length = 358
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 563 SSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
S+QS Y+ VWEGSL G R GQP FI+KLE
Sbjct: 165 SAQSNYISVWEGSLLGLRHGQPKFISKLE 193
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%), Gaps = 3/33 (9%)
Query: 562 HSSQSKYVK---VWEGSLSGQRQGQPVFITKLE 591
H +Q+ + + +WEGSL G++QG+P+FITKLE
Sbjct: 16 HETQNGWHRSSPIWEGSLYGRKQGEPIFITKLE 48
>gi|388520047|gb|AFK48085.1| unknown [Medicago truncatula]
Length = 357
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 563 SSQSKYVKVWEGSLSGQRQGQPVFITKLE 591
S+QS Y+ VWEGSL G R GQP FI+KLE
Sbjct: 164 SAQSNYISVWEGSLLGLRHGQPKFISKLE 192
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%), Gaps = 3/33 (9%)
Query: 562 HSSQSKYVK---VWEGSLSGQRQGQPVFITKLE 591
H +Q+ + + +WEGSL G++QG+P+FITKLE
Sbjct: 15 HETQNGWHRSSPIWEGSLYGRKQGEPIFITKLE 47
>gi|380025264|ref|XP_003696397.1| PREDICTED: uncharacterized protein LOC100868137 [Apis florea]
Length = 896
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 46/297 (15%)
Query: 3 EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSA---SNVELSLVTFNT 59
+ +I +EGTA G Y + ++YL + F + ++ + S +V ++
Sbjct: 11 QADVIFVIEGTAVNGAYLNDLKTNYLTPTLEYFSQGGIEDREYVSEQNSTTLYGIVVYHA 70
Query: 60 HGSYCACLVQRSGWTKDVDIFLHWLSTIPFAGG-GFNDAAIAEGLSEALMMFSVAPNGSQ 118
A + G + L L + GG G A I EGL+ L F +
Sbjct: 71 ADCLPAPCTETFGPYANPHKLLLVLEKLEMVGGKGECFANIGEGLATGLQCFEDL--QLR 128
Query: 119 NQQNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQ 178
+ N Q+HCIL+ S P+ Q + Q A E +A + +
Sbjct: 129 REPNTAPQKHCILICNSPPY-----------QTVIQESYKFAG-----HTIEQLATLYQE 172
Query: 179 CSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEAR------ 232
+++LS++ P+++P L ++ A + +++ + +K+P LVL+ ++ R
Sbjct: 173 RNINLSILSPRKIPALFKLFEKAGGDLQSSQTK-NYAKDPRHLVLLRNYNLKERPVSPTI 231
Query: 233 --AALSRPGVA----------NLAPNQNPVKMDIAPVTSVTG-----PAPTSIPSVN 272
A + G A N +PN N V+ I T G P P +I SV+
Sbjct: 232 GGAVHNTSGTAAQIPLSPLQSNDSPNTNQVQQSITQPTQSQGPPFRNPTPQNISSVH 288
>gi|47940179|gb|AAH71206.1| Med25 protein [Mus musculus]
Length = 618
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 26/141 (18%)
Query: 89 FAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRH--CILVAASNPHPLPTPVYR 146
GGG + + IAEGLS AL +F + + + GQ H C+L+ S P+ LP
Sbjct: 1 MGGGGESCSLIAEGLSTALQLF----DDFKKMREQIGQTHRVCLLICNSPPYLLPA---- 52
Query: 147 PQMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPR 206
E+ S + E++ + + + S++ P++LP L ++ A P
Sbjct: 53 -----------VESTTYSGCT-TESLVQKIGERGIHFSIVSPRKLPALRLLFEKAA-PPA 99
Query: 207 AADP---PVDNSKNPHFLVLI 224
+P P D S++P +VL+
Sbjct: 100 LLEPLQQPADVSQDPRHMVLV 120
>gi|403299508|ref|XP_003940526.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Saimiri boliviensis boliviensis]
Length = 650
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 90 AGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQNVDGQRH--CILVAASNPHPLPTPVYRP 147
GGG + + IAEGLS AL +F + + + GQ H C+L+ S P+ LP
Sbjct: 31 GGGGESCSLIAEGLSTALQLF----DDFKKMREQIGQTHRVCLLICNSPPYLLPA----- 81
Query: 148 QMQNLDQNENNEAQAESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRA 207
E+ S + E + + + + S++ P++LP L ++ A P A
Sbjct: 82 ----------VESTTYSGCT-TENLVQQIGERGIHFSIVSPRKLPALRLLFEKAA--PPA 128
Query: 208 ----ADPPVDNSKNPHFLVLI 224
PP D S++P +VL+
Sbjct: 129 LLEPLQPPTDVSQDPRHMVLV 149
>gi|74208047|dbj|BAE29135.1| unnamed protein product [Mus musculus]
Length = 599
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 49/186 (26%)
Query: 64 CACLVQRSGWTKDVDIFLHWLSTIP----FAGGGFNDAA----------------IAEGL 103
C CL++ SG ++ W + P G + D+ IAEGL
Sbjct: 139 CRCLLRTSGRNPHLEF---WEAPRPSLLHIRDGAYEDSTTFGQMFMGGGGESCSLIAEGL 195
Query: 104 SEALMMFSVAPNGSQNQQNVDGQRH--CILVAASNPHPLPTPVYRPQMQNLDQNENNEAQ 161
S AL +F + + + GQ H C+L+ S P+ LP E+
Sbjct: 196 STALQLF----DDFKKMREQIGQTHRVCLLICNSPPYLLPA---------------VEST 236
Query: 162 AESRLSDAETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADP---PVDNSKNP 218
S + E++ + + + S++ P++LP L ++ A P +P P D S++P
Sbjct: 237 TYSGCT-TESLVQKIGERGIHFSIVSPRKLPALRLLFEKAA-PPALLEPLQQPADVSQDP 294
Query: 219 HFLVLI 224
+VL+
Sbjct: 295 RHMVLV 300
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.125 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,670,871,565
Number of Sequences: 23463169
Number of extensions: 412571790
Number of successful extensions: 1428023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 12146
Number of HSP's that attempted gapping in prelim test: 1358212
Number of HSP's gapped (non-prelim): 51288
length of query: 619
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 470
effective length of database: 8,863,183,186
effective search space: 4165696097420
effective search space used: 4165696097420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 80 (35.4 bits)