Query 007066
Match_columns 619
No_of_seqs 250 out of 826
Neff 4.9
Searched_HMMs 46136
Date Thu Mar 28 18:27:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007066.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007066hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 3E-208 7E-213 1731.0 54.1 616 1-619 165-785 (785)
2 PLN00149 potassium transporter 100.0 2E-206 5E-211 1717.9 54.6 610 1-619 165-779 (779)
3 PLN00150 potassium ion transpo 100.0 3E-205 7E-210 1705.6 53.7 597 1-619 182-779 (779)
4 PLN00151 potassium transporter 100.0 5E-205 1E-209 1704.0 53.3 604 1-619 242-852 (852)
5 TIGR00794 kup potassium uptake 100.0 3E-187 6E-192 1554.1 49.9 552 1-619 136-688 (688)
6 PRK10745 trkD potassium transp 100.0 7E-172 2E-176 1412.2 45.5 508 1-619 112-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 1E-163 3E-168 1336.4 32.6 434 1-438 101-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 4E-161 9E-166 1298.8 42.4 510 1-618 117-626 (627)
9 TIGR00911 2A0308 L-type amino 92.5 0.23 5E-06 55.5 6.3 86 34-123 166-255 (501)
10 COG0531 PotE Amino acid transp 76.9 12 0.00026 40.5 9.1 179 32-214 133-324 (466)
11 PRK10655 potE putrescine trans 71.8 39 0.00084 37.0 11.5 42 35-76 125-169 (438)
12 PRK10435 cadB lysine/cadaverin 71.3 27 0.00059 38.4 10.3 23 36-58 124-146 (435)
13 PF13520 AA_permease_2: Amino 71.2 9.9 0.00022 41.0 6.7 247 8-270 90-366 (426)
14 TIGR00909 2A0306 amino acid tr 71.2 14 0.0003 40.1 7.9 168 35-215 135-317 (429)
15 TIGR03813 put_Glu_GABA_T putat 69.8 26 0.00057 38.9 9.8 19 314-332 434-452 (474)
16 TIGR00907 2A0304 amino acid pe 68.8 17 0.00036 40.5 8.0 25 34-58 144-168 (482)
17 PRK15049 L-asparagine permease 68.7 27 0.0006 39.4 9.8 42 35-76 146-190 (499)
18 TIGR00930 2a30 K-Cl cotranspor 62.4 2.3E+02 0.005 35.3 16.5 25 33-57 203-227 (953)
19 TIGR03810 arg_ornith_anti argi 59.6 70 0.0015 35.6 10.7 44 172-215 274-317 (468)
20 PF06570 DUF1129: Protein of u 58.8 37 0.00081 34.0 7.6 21 313-333 179-199 (206)
21 PF14362 DUF4407: Domain of un 56.0 69 0.0015 33.8 9.4 85 254-338 14-111 (301)
22 COG4059 MtrE Tetrahydromethano 53.8 12 0.00026 38.7 3.2 30 310-339 258-287 (304)
23 KOG3145 Cystine transporter Cy 52.8 17 0.00037 39.2 4.2 89 37-136 213-341 (372)
24 TIGR00908 2A0305 ethanolamine 46.5 58 0.0013 35.7 7.3 25 35-59 123-147 (442)
25 PRK11021 putative transporter; 44.5 2.6E+02 0.0056 30.4 11.9 28 33-60 115-142 (410)
26 TIGR00906 2A0303 cationic amin 44.3 2.6E+02 0.0057 32.3 12.4 44 33-76 161-207 (557)
27 PRK10746 putative transport pr 43.4 1.1E+02 0.0023 34.3 8.9 25 314-338 427-451 (461)
28 KOG4742 Predicted chitinase [G 42.9 11 0.00024 40.2 1.0 33 126-167 172-210 (286)
29 PRK10249 phenylalanine transpo 42.5 1.1E+02 0.0024 34.0 8.9 102 36-139 138-247 (458)
30 PRK11357 frlA putative fructos 41.3 2.1E+02 0.0046 31.5 10.7 43 35-77 129-174 (445)
31 TIGR00905 2A0302 transporter, 41.2 86 0.0019 35.0 7.7 24 35-58 131-154 (473)
32 PRK10238 aromatic amino acid t 41.0 1.1E+02 0.0023 34.2 8.4 113 36-152 129-250 (456)
33 KOG3643 GABA receptor [Signal 40.6 23 0.00051 39.9 3.1 91 208-302 225-325 (459)
34 PRK10644 arginine:agmatin anti 38.6 2.3E+02 0.0049 31.3 10.4 23 36-58 128-150 (445)
35 PRK11387 S-methylmethionine tr 35.7 1.6E+02 0.0036 32.7 8.8 21 37-57 133-153 (471)
36 PRK10580 proY putative proline 35.7 1.6E+02 0.0035 32.6 8.7 25 312-336 423-447 (457)
37 TIGR01773 GABAperm gamma-amino 34.7 4.3E+02 0.0092 29.2 11.8 45 35-79 128-175 (452)
38 TIGR00913 2A0310 amino acid pe 31.1 1.6E+02 0.0034 32.8 7.7 21 316-336 444-464 (478)
39 TIGR00910 2A0307_GadC glutamat 29.6 3.2E+02 0.007 31.1 10.0 43 111-153 202-246 (507)
40 PRK10519 hypothetical protein; 26.9 35 0.00076 33.2 1.5 48 15-68 13-61 (151)
41 PF05545 FixQ: Cbb3-type cytoc 23.9 64 0.0014 25.2 2.2 28 323-350 20-47 (49)
42 COG2179 Predicted hydrolase of 23.2 18 0.00039 36.1 -1.2 70 540-614 44-117 (175)
43 PF06155 DUF971: Protein of un 22.7 47 0.001 28.8 1.4 15 588-602 25-39 (89)
44 TIGR03428 ureacarb_perm permea 22.3 1.1E+03 0.024 26.2 13.4 25 34-58 145-169 (475)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=3.2e-208 Score=1731.01 Aligned_cols=616 Identities=85% Similarity=1.375 Sum_probs=557.0
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|+||||+|||||||||||||||++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 165 m~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~ 244 (785)
T PLN00148 165 MVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIH 244 (785)
T ss_pred HHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 245 ~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~ 324 (785)
T PLN00148 245 WNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKN 324 (785)
T ss_pred cCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 325 p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~ 404 (785)
T PLN00148 325 IPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMIL 404 (785)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 405 ~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~i 484 (785)
T PLN00148 405 TLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVL 484 (785)
T ss_pred HHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++++|++|.||++|||++||++||||
T Consensus 485 a~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ 564 (785)
T PLN00148 485 SAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 564 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCC-CCCcccCCccc
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFS-SSESSLDGRMA 479 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~~-~~~~~~~~~~~ 479 (619)
||++|+|+||++|||+++++++++|++|||++||||||.+++++|||++|+++|++|||+|+.+.+.. .+.++.|++++
T Consensus 565 ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~ 644 (785)
T PLN00148 565 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMA 644 (785)
T ss_pred EEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccc
Confidence 99999999999999999999999999999999999999998999999999999999999998542110 00111244555
Q ss_pred eeeccccccCcccccccccccC--CCCccccccccccccccccccccCCc--cccccccccCCCCCCCChhHHHHHHHHH
Q 007066 480 VISTRNVESNTNLIISVQEEDI--GSSSSIQSSKSLTLQSLQSVFDEDNP--VRRRQVRFQLPSDPGMDPAVREELMDLI 555 (619)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 555 (619)
++++.+..+... ... ++++ .+.....++++...+..++.++.+.+ .+++++++..+++.+.+++++||+++|+
T Consensus 645 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~ 721 (785)
T PLN00148 645 VISTRDVQSSSL-LMV--SEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLI 721 (785)
T ss_pred cccccccccccc-ccc--ccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHH
Confidence 554322111000 000 0000 00000001111112222222232222 3566788877665566789999999999
Q ss_pred HHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 556 QAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 556 ~A~eaGVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
+|||+||+||+||++||||++|+|+||++||++|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 722 ~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 722 EAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=2.1e-206 Score=1717.92 Aligned_cols=610 Identities=58% Similarity=1.050 Sum_probs=549.3
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeE-ehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGEL-LILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVI 79 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~v-v~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~ 79 (619)
|+||||+|||||||||||||||+..|...++++ +||||+||++||++||+||+|||++|||||++||++||++|+|||+
T Consensus 165 m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~ 244 (779)
T PLN00149 165 MVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIF 244 (779)
T ss_pred HHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999976444455 9999999999999999999999999999999999999999999999
Q ss_pred ccCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhcc
Q 007066 80 HWNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSK 159 (619)
Q Consensus 80 ~~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~ 159 (619)
+|||+||||+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++
T Consensus 245 ~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~ 324 (779)
T PLN00149 245 HWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSK 324 (779)
T ss_pred hcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc---cccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHH
Q 007066 160 NLD---KIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWI 236 (619)
Q Consensus 160 ~p~---~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~ 236 (619)
||+ +.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+
T Consensus 325 ~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~ 404 (779)
T PLN00149 325 HHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWT 404 (779)
T ss_pred CcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHH
Confidence 996 56669999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcch
Q 007066 237 LMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWV 316 (619)
Q Consensus 237 Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~ 316 (619)
||++|+++|++||||++||||||+||++||++||||+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+
T Consensus 405 Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~ 484 (779)
T PLN00149 405 LMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWV 484 (779)
T ss_pred HHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEE
Q 007066 317 PLVLSSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVL 396 (619)
Q Consensus 317 pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~ 396 (619)
||++|++++++|++||||++++++++.++++|++++.++.++.++.||||+|+|||++.+++|++|.||++|||++||++
T Consensus 485 pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~ 564 (779)
T PLN00149 485 PIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVL 564 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceE
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred EEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcC-CCCCcccC
Q 007066 397 VFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQF-SSSESSLD 475 (619)
Q Consensus 397 vfv~i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~-~~~~~~~~ 475 (619)
||||||++|+|+||++|||+++|++++++++|||++||||||..++++|||++|+++|++|||+|+.+.+. .++.+++|
T Consensus 565 Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~ 644 (779)
T PLN00149 565 VFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGED 644 (779)
T ss_pred EEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999754221 11111124
Q ss_pred CccceeeccccccCcccccccccccCCCCccccccccccccccccccccCCccccccccccCCCCCCCChhHHHHHHHHH
Q 007066 476 GRMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLI 555 (619)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 555 (619)
++++++++.+... ++.... ++ .+. +..+.+.+.+++..+. + .+.+++++++..+++.+.+++++||+++|+
T Consensus 645 ~~~~~~~~~~~~~-~~~~~~--~~--~~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 715 (779)
T PLN00149 645 ERMTVVGTCSTHL-EGIQLR--ED--DSD-KQEPAGTSELREIRSP-P--VSRPKKRVRFVVPESPKIDRGAREELQELM 715 (779)
T ss_pred ccccccccccccc-cccccc--cc--ccc-ccccccccccccccCc-c--ccCcccceeeccccccccchhHHHHHHHHH
Confidence 5566654322111 000000 00 000 0000001111111111 1 112346778877766667789999999999
Q ss_pred HHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 556 QAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 556 ~A~eaGVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
+|||+||+||+||++|||||+|+|+||++|||+|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 716 ~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 716 EAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3.3e-205 Score=1705.63 Aligned_cols=597 Identities=53% Similarity=0.974 Sum_probs=540.9
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|+||||+|||||||||||||||+..|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 182 m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~ 261 (779)
T PLN00150 182 MVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIK 261 (779)
T ss_pred HHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
|||+||||+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 262 ~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~ 341 (779)
T PLN00150 262 WDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKH 341 (779)
T ss_pred cCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 342 p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~ 421 (779)
T PLN00150 342 MEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVL 421 (779)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 422 ~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~i 501 (779)
T PLN00150 422 CLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVI 501 (779)
T ss_pred HHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++++|++|.||++|||++||++||+|
T Consensus 502 a~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~ 581 (779)
T PLN00150 502 AAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVC 581 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 480 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~~~~~~~~~~~~~~ 480 (619)
||++|+|+||++|||+++++++++|++|||++||||||..++++|||++|+++|++|||+|+.+..... +++++
T Consensus 582 i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~------~~~~~ 655 (779)
T PLN00150 582 IKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDL------ESMAA 655 (779)
T ss_pred EEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhcccccc------ccccc
Confidence 999999999999999999999999999999999999999999999999999999999999975321110 11111
Q ss_pred eeccccccCcccccccccccCCCCccccccccc-cccccccccccCCccccccccccCCCCCCCChhHHHHHHHHHHHHH
Q 007066 481 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSL-TLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKE 559 (619)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e 559 (619)
....++.. . ++ ++.....+++.+ ..++.++.++.+.+. +++.++ ++.+++++||+++|++|||
T Consensus 656 ~~~~~~~~------~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~v~eEl~~L~~A~e 719 (779)
T PLN00150 656 SWTPEELM------G--EG--NSVGSGLFTQYDQSDINFATSQEWKRPS-SQEDSV-----SGHSSDTQDEVAFLNKCKE 719 (779)
T ss_pred cccccccc------c--cC--Cccccccccccccccccccccccccccc-cccccc-----ccccccHHHHHHHHHHHHH
Confidence 11110000 0 00 000000000000 000111111111111 122222 2235789999999999999
Q ss_pred cCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 560 AGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 560 aGVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
+||+||+||++||||++|+|+||++||++|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 720 aGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 720 AGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred cCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=5.2e-205 Score=1703.97 Aligned_cols=604 Identities=45% Similarity=0.858 Sum_probs=540.6
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|+||||+|||||||||||||||++.|++++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 242 mviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~ 321 (852)
T PLN00151 242 MVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVK 321 (852)
T ss_pred HHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
|||+|||||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++|
T Consensus 322 ~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~ 401 (852)
T PLN00151 322 YDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKN 401 (852)
T ss_pred cCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 402 p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~ 481 (852)
T PLN00151 402 PDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVM 481 (852)
T ss_pred cccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++
T Consensus 482 ~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~l 561 (852)
T PLN00151 482 CLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVF 561 (852)
T ss_pred HHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||||
T Consensus 562 a~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ 641 (852)
T PLN00151 562 ASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVC 641 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccC-CchhHHHHHHHHHHHHHhhhccCCcCCC--CCcccCC-
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQR-DDGDFENQLIQSIAEFIQMEAEEPQFSS--SESSLDG- 476 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~-~~~~f~~~lv~~L~~fi~~e~~~~~~~~--~~~~~~~- 476 (619)
||++|+|+||++|||++++++++++++|||++||||||.++ +++|||++|+++|++|||+|+.+..... +.+.+++
T Consensus 642 ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~ 721 (852)
T PLN00151 642 IKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDED 721 (852)
T ss_pred EEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccc
Confidence 99999999999999999999999999999999999999976 8899999999999999999975421101 1010011
Q ss_pred --ccceeeccccccCcccccccccccCCCCcccccccccccc-ccccccccCCccccccccccCCCCCCCChhHHHHHHH
Q 007066 477 --RMAVISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQ-SLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMD 553 (619)
Q Consensus 477 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~ 553 (619)
+++.....++.+ ....+ . ...... .+++...+ +..+. +.+.+. .+++++ ++.+++++||+++
T Consensus 722 ~~~~~~~~~~~~~~--~~~~~---~--~~~~~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~~~El~~ 786 (852)
T PLN00151 722 SVTSSRVLIAPNGS--VYSLG---V--PLLADY-RLTSKPIPEASTSE-EVSPVL-PSSSMS-----SDEDQSLEYELSF 786 (852)
T ss_pred cccccccccCCCcc--ccccc---c--cccccc-cccccccccccccc-cccccc-cccccc-----cccCccHHHHHHH
Confidence 112111110000 00000 0 000000 00000000 00000 101110 112222 2235789999999
Q ss_pred HHHHHHcCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 554 LIQAKEAGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 554 L~~A~eaGVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
|++|||+||+||+||++||||++|+|+||++||++|+|||||||+|.+.|+|||++|+||||+|||
T Consensus 787 l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 787 IREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2.8e-187 Score=1554.07 Aligned_cols=552 Identities=45% Similarity=0.867 Sum_probs=524.4
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|++|||+||||||||||||||+++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++
T Consensus 136 l~~gDgviTPAiSVLSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~ 215 (688)
T TIGR00794 136 MVMGDGVLTPAISVLSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVK 215 (688)
T ss_pred HHhcccccccchhhhhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
|||+||||+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++|
T Consensus 216 ~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~ 295 (688)
T TIGR00794 216 FNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKH 295 (688)
T ss_pred cCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 296 p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~ 375 (688)
T TIGR00794 296 PEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLG 375 (688)
T ss_pred cchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|+++|++||||++||+|||+||++||+|||+|++++|+.+|||+++++++++++|+.+|+.||+||+.|++||||+||++
T Consensus 376 ~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~i 455 (688)
T TIGR00794 376 VIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSL 455 (688)
T ss_pred HHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHh-cCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLG-LGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFV 399 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv 399 (619)
|++++++|++|+|||+++++++.++++|++++.+ +.++.+++|+||+|+|+|++++++|+++.||++|||++||++||+
T Consensus 456 a~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfl 535 (688)
T TIGR00794 456 SGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFL 535 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEE
Confidence 9999999999999999999999999999999987 444444589999999999999999999999999999999999999
Q ss_pred EEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccc
Q 007066 400 CVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMA 479 (619)
Q Consensus 400 ~i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~~~~~~~~~~~~~ 479 (619)
||+++|+|+||++|||+++++++++ |+|||++||||||+++.+++|+++++++|.+|++++..+ +..
T Consensus 536 tv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~-----~~~------- 602 (688)
T TIGR00794 536 SLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGF-----NLN------- 602 (688)
T ss_pred EEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhh-----ccc-------
Confidence 9999999999999999999999755 899999999999999999999999999999999876421 000
Q ss_pred eeeccccccCcccccccccccCCCCccccccccccccccccccccCCccccccccccCCCCCCCChhHHHHHHHHHHHHH
Q 007066 480 VISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKE 559 (619)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e 559 (619)
+. + .. .+. + .+.+.+||++++++++|
T Consensus 603 ------------------~~--~---~~--------------~~~---------~--------~~~~~eee~~~~~~~~~ 628 (688)
T TIGR00794 603 ------------------NL--E---EL--------------SDK---------R--------CRMPIEEIFENAMETKE 628 (688)
T ss_pred ------------------cc--c---cc--------------ccc---------c--------cccchHHHHHHHHHHhh
Confidence 00 0 00 000 0 01125799999999999
Q ss_pred cCcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 560 AGIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 560 aGVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
+||+|++||++++++++|+++||..||++|.|||||||++...++|||+|++||||.||+
T Consensus 629 ~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 629 HGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred cCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999999999999999999999999999999999999999999986
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=7.4e-172 Score=1412.21 Aligned_cols=508 Identities=30% Similarity=0.569 Sum_probs=481.7
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|++|||+|||||||||||||||+..|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+
T Consensus 112 l~~gDgvITPAISVLSAVEGL~v~~p~l~~-~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~ 190 (622)
T PRK10745 112 FFYGEVVITPAISVMSAIEGLEIVAPQLDT-YIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA 190 (622)
T ss_pred HHhhccccchhHHHHHHhhcccccCCCCCC-ccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999965 9999999999999999999999999999999999999999999999998
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
||+||+|+||+||++||.+||..||.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||+|++|
T Consensus 191 -~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~ 269 (622)
T PRK10745 191 -NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKN 269 (622)
T ss_pred -CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 270 p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~ 349 (622)
T PRK10745 270 PEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVA 349 (622)
T ss_pred chhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|++++++||||+|||+|||+|||+||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++
T Consensus 350 ~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~i 429 (622)
T PRK10745 350 VVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSL 429 (622)
T ss_pred HHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|++|++||+++++++++++++++++.+..++.++.||||+|+|+|+.++++|+++.||+||||++||++||+|
T Consensus 430 a~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~ 509 (622)
T PRK10745 430 GLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLT 509 (622)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEE
Confidence 99999999999999999999999999999999888877777899999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 480 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~~~~~~~~~~~~~~ 480 (619)
|+++|+|+|+++||++++++++ |+|||++||||||+|+.++.+ +.. +.+..
T Consensus 510 v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L-----~~~----~~~g~----------------- 560 (622)
T PRK10745 510 LRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVF-----HRC----GLEGL----------------- 560 (622)
T ss_pred EEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHH-----HHH----HhCCC-----------------
Confidence 9999999999999999999996 699999999999987754333 111 00000
Q ss_pred eeccccccCcccccccccccCCCCccccccccccccccccccccCCccccccccccCCCCCCCChhHHHHHHHHHHHHHc
Q 007066 481 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKEA 560 (619)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ea 560 (619)
+ ++ -.
T Consensus 561 ------------------~-----------------------------------~~----------------------~~ 565 (622)
T PRK10745 561 ------------------S-----------------------------------CR----------------------MM 565 (622)
T ss_pred ------------------C-----------------------------------CC----------------------cc
Confidence 0 00 01
Q ss_pred CcEEEeeceEEEecCCCc---hHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEEC
Q 007066 561 GIAYIMGHSYVKARRSSS---FVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 619 (619)
Q Consensus 561 GVvYIlG~~~v~ar~~S~---~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~v 619 (619)
.++|.+||+.+...++++ |-|| .|.||.||+++....+++|++|++|+|+-+|+
T Consensus 566 ~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 566 ETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred ceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 578999999999888877 5555 69999999999999999999999999999875
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.4e-163 Score=1336.38 Aligned_cols=434 Identities=43% Similarity=0.845 Sum_probs=429.9
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
|++|||+||||||||||||||++.+|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+
T Consensus 101 l~~gDgviTPAISVlSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~ 179 (534)
T PF02705_consen 101 LFYGDGVITPAISVLSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ 179 (534)
T ss_pred hhhcceeecchHHHHHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999999999999998 59999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
||+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++|
T Consensus 180 -~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~ 258 (534)
T PF02705_consen 180 -HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSH 258 (534)
T ss_pred -CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcC
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++
T Consensus 259 p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~ 338 (534)
T PF02705_consen 259 PEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIG 338 (534)
T ss_pred cchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
|++++++||||++||+|||+||++||++||+|++++++.+||||++++++++++|+.+|+.||+||+.|++||||+||++
T Consensus 339 ~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~i 418 (534)
T PF02705_consen 339 VIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLI 418 (534)
T ss_pred HHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|++|+|||+++++++++++++++++.++.++.++.|+||+|+|+|+..+++|+++.||++||+++||+++|+|
T Consensus 419 a~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~ 498 (534)
T PF02705_consen 419 AAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLT 498 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeec
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKD 438 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d 438 (619)
++++|+|+||++|||+++++++ +++|||++||||||
T Consensus 499 v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 499 VKTEPVPRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred EEEeccCCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 9999999999999999999996 28999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-161 Score=1298.76 Aligned_cols=510 Identities=32% Similarity=0.643 Sum_probs=482.9
Q ss_pred CccccccccchhHHHhhhhccccccCCCCCCeEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 007066 1 MVIGDGVLTPAISVLSSVSGLQVTENKLTDGELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIH 80 (619)
Q Consensus 1 m~~gDgviTPAiSVLSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~ 80 (619)
+|+|||+||||||||||||||++++|.+++ +|+|||++||++||++||+||++||++|||||++||+++|.+|++||.+
T Consensus 117 lf~GD~vITPAiSVlSAvEGL~iv~p~~~~-~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~ 195 (627)
T COG3158 117 LFYGDAVITPAISVLSAVEGLEIVTPALDP-YVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID 195 (627)
T ss_pred HHhcccccchhHHHHHHhccccccCccccC-ccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc
Confidence 589999999999999999999999999985 9999999999999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHHHHHhhcCcccceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccchhhhccC
Q 007066 81 WNPKVISAISPLYIIKYFRETGKTGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN 160 (619)
Q Consensus 81 ~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~ 160 (619)
||+||+|+|||||++|+.++|..||++||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++|
T Consensus 196 -~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~ 274 (627)
T COG3158 196 -DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSN 274 (627)
T ss_pred -CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCccCCceeechhhHHHHHH
Q 007066 161 LDKIPNSFYDSIPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRHIYGQIYIPEINWILMIL 240 (619)
Q Consensus 161 p~~~~npFy~~~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~~~GQIYIP~vNw~Lmi~ 240 (619)
|++..||||.++|+|++||+++|||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|+++
T Consensus 275 p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~ 354 (627)
T COG3158 275 PEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVA 354 (627)
T ss_pred cccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHH
Q 007066 241 TLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFLAIEGVYLSAAFIKVPQGGWVPLVL 320 (619)
Q Consensus 241 ~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sanl~Ki~~GGW~pl~i 320 (619)
++.++++||+|++||+|||+|||+||+|||+|++.+++..|||+++++.++..+|+++|..||+||+.|++||||+|+++
T Consensus 355 V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~plli 434 (627)
T COG3158 355 VVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLL 434 (627)
T ss_pred HhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHhhhhccCCChHHHHhcCCCCCCccccceEEEEeCCCCCchhHHHHHHhhCcccceEEEEEE
Q 007066 321 SSVFMVVMYIWHYGTRKKYNFDLHNKVSLRWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVC 400 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lhe~~vfv~ 400 (619)
|++++++|+||++|+++.+++.+++++|+|.+++..++.++.|||||+||+|+..+.+|.+++|++|||+++||++||++
T Consensus 435 a~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~lt 514 (627)
T COG3158 435 AAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLT 514 (627)
T ss_pred HHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeecccCCchhHHHHHHHHHHHHHhhhccCCcCCCCCcccCCccce
Q 007066 401 VKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDVQRDDGDFENQLIQSIAEFIQMEAEEPQFSSSESSLDGRMAV 480 (619)
Q Consensus 401 i~~~~~P~V~~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~lv~~L~~fi~~e~~~~~~~~~~~~~~~~~~~ 480 (619)
+++.|+|||+++||++++++++ +++|++++|||||+|+.++.+ +. ++.+ |
T Consensus 515 v~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l-----~~----~~~~--------------G---- 564 (627)
T COG3158 515 VRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPRAL-----RL----CRKK--------------G---- 564 (627)
T ss_pred EEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHHHH-----HH----Hhhc--------------C----
Confidence 9999999999999999999998 699999999999998865333 11 1100 0
Q ss_pred eeccccccCcccccccccccCCCCccccccccccccccccccccCCccccccccccCCCCCCCChhHHHHHHHHHHHHHc
Q 007066 481 ISTRNVESNTNLIISVQEEDIGSSSSIQSSKSLTLQSLQSVFDEDNPVRRRQVRFQLPSDPGMDPAVREELMDLIQAKEA 560 (619)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ea 560 (619)
-+|++.
T Consensus 565 ----------------------------------------------------~~f~im---------------------- 570 (627)
T COG3158 565 ----------------------------------------------------LKFDIM---------------------- 570 (627)
T ss_pred ----------------------------------------------------ceeccc----------------------
Confidence 000000
Q ss_pred CcEEEeeceEEEecCCCchHHHHHHHHHHHHHhhhcCCCCcccccCCCCEEEeeeEEE
Q 007066 561 GIAYIMGHSYVKARRSSSFVKRFMIDILYSFLRKNCRGPSVALNIPHISLIEVGMIYY 618 (619)
Q Consensus 561 GVvYIlG~~~v~ar~~S~~~Kk~~In~~Y~FLRkNcR~~~~~L~IP~~~lleVGm~y~ 618 (619)
...|.+|++.+++++.|++-+-- +-.|.+|.||.-++...++||.+|++|+|---|
T Consensus 571 ~tsFfl~re~l~~~~~~g~~~w~--~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 571 ETSFFLSRESLIASKNSGMPRWR--DRLFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred ceEEEEEeeeeecCCCCCchHHH--HHHHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 23589999999999999886532 357999999999999999999999999995443
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.49 E-value=0.23 Score=55.48 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=43.7
Q ss_pred ehhHHHHHHHHHhhhcccchhhhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccce-ee
Q 007066 34 LILACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWI-SL 109 (619)
Q Consensus 34 v~is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~i~~~Gi~ni~~~~p~Vl~AlnP~ya~~f~~~~~~~g~~-~L 109 (619)
..+++++++++..+.-+|.+..+++ +.-+.++=++.+.+.|++.+.+-+++ ..+|...+.-. .++..+|. .+
T Consensus 166 ~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a~ 241 (501)
T TIGR00911 166 RLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLAF 241 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHHH
Confidence 4577788888899999997666543 33332222233344555544321111 11222111000 01223443 46
Q ss_pred cceeeeecchhhhh
Q 007066 110 GGLLLCITGTEAMF 123 (619)
Q Consensus 110 G~V~L~iTG~EALy 123 (619)
..++.+.+|-|+.=
T Consensus 242 ~~~~~af~G~e~~~ 255 (501)
T TIGR00911 242 YSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHhHHHHh
Confidence 67788888888653
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=76.94 E-value=12 Score=40.54 Aligned_cols=179 Identities=15% Similarity=0.087 Sum_probs=99.0
Q ss_pred eEehhHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccceeecc
Q 007066 32 ELLILACVILVGLFALQHFGTHKVAVMFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGWISLGG 111 (619)
Q Consensus 32 ~vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~i~~~Gi~ni~~~~p~Vl~AlnP~ya~~f~~~~~~~g~~~LG~ 111 (619)
....++.+++++++.++-+|....+++..-..++=++.+.++++..+..++......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 456789999999999999999988887766655555555555555555533332222221111 00000012345566
Q ss_pred eeeeecchhhh--hc-cCCCCcccceeeehhhhhhhHHHhhcccchhhhccCCc-ccc-----Ccce---eecc-CcchH
Q 007066 112 LLLCITGTEAM--FA-DLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKNLD-KIP-----NSFY---DSIP-EPVFW 178 (619)
Q Consensus 112 V~L~iTG~EAL--yA-DlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~-~~~-----npFy---~~~P-~~~~~ 178 (619)
++.+.+|-|+. +| ++=+ .+|.|-.+-..-..-+.++-.+++-+....-|. +.. +|+. .... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78889998864 33 2333 445565554443333333333333333333332 111 4542 2223 35555
Q ss_pred HHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCc
Q 007066 179 PVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPR 214 (619)
Q Consensus 179 P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr 214 (619)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555555555555556666666666667777899998
No 11
>PRK10655 potE putrescine transporter; Provisional
Probab=71.76 E-value=39 Score=37.05 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHhhhcccchhhhhhh---hhHHHHHHHHHHHHHHH
Q 007066 35 ILACVILVGLFALQHFGTHKVAVMF---APIIIVWLISIFAVGLY 76 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg~~F---gPIm~vWF~~i~~~Gi~ 76 (619)
.+++++++.+..+.-+|++..+++- .-.+++-++.+.+.|+.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~ 169 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWF 169 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666778889999987766642 23333334444445544
No 12
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=71.35 E-value=27 Score=38.41 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=17.5
Q ss_pred hHHHHHHHHHhhhcccchhhhhh
Q 007066 36 LACVILVGLFALQHFGTHKVAVM 58 (619)
Q Consensus 36 is~~ILv~LF~~Q~~GT~kvg~~ 58 (619)
++++++.++..+..+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999999887765
No 13
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=71.22 E-value=9.9 Score=41.05 Aligned_cols=247 Identities=16% Similarity=0.167 Sum_probs=130.4
Q ss_pred ccchhHHHhhhhccccc-cCCCCCC--eEehhHHHHHHHHHhhhcccchhhhhh---hhhHHH-HHHHHHHHHHHHhhcc
Q 007066 8 LTPAISVLSSVSGLQVT-ENKLTDG--ELLILACVILVGLFALQHFGTHKVAVM---FAPIII-VWLISIFAVGLYNVIH 80 (619)
Q Consensus 8 iTPAiSVLSAveGl~v~-~p~l~~~--~vv~is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~-vWF~~i~~~Gi~ni~~ 80 (619)
.+.+....++.+-+... .|++.++ ....+++++++..+.+.-+|....+++ .+=+.+ +-++.+.++|++...+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~ 169 (426)
T PF13520_consen 90 LSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF 169 (426)
T ss_dssp HHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred ccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc
Confidence 34445555566666543 3444332 234577888888999999998776654 333333 3445556666665533
Q ss_pred cCcce-----eeecChHHHHHHHhhcCccc-ceeecceeeeecchhhhhccCCCCcccceeeehhhhhhhHHHhhcccch
Q 007066 81 WNPKV-----ISAISPLYIIKYFRETGKTG-WISLGGLLLCITGTEAMFADLGHFTALSIRLAFTFFVYPCLVVQYMGQA 154 (619)
Q Consensus 81 ~~p~V-----l~AlnP~ya~~f~~~~~~~g-~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQg 154 (619)
+..- ....+|. +..+ +..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-
T Consensus 170 -~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~ 239 (426)
T PF13520_consen 170 -SGFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSI 239 (426)
T ss_dssp -CHHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhh
Confidence 1111 1111221 1111 4456677888899888655444444566655443322223332222223
Q ss_pred hhhccCCcc----ccC------cceeec-cCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCceeEEecCCc
Q 007066 155 AYLSKNLDK----IPN------SFYDSI-PEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRVKVVHTSRH 223 (619)
Q Consensus 155 A~ll~~p~~----~~n------pFy~~~-P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ki~hTS~~ 223 (619)
++...-|++ .+| .+++.. .++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k- 317 (426)
T PF13520_consen 240 ALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK- 317 (426)
T ss_dssp HHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS-
T ss_pred eeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc-
Confidence 333332221 112 222222 457778777777777777666666666666777778899994 2223331
Q ss_pred cCCceeechhhHHHHHHHh-hee--EEe---cCchhhHhhhcceeehhHHHHH
Q 007066 224 IYGQIYIPEINWILMILTL-AIT--IGF---QDTTLIGNAYGLACMTVMFITT 270 (619)
Q Consensus 224 ~~GQIYIP~vNw~Lmi~~i-~vv--~~F---~~s~~l~~AYGiaV~~~M~iTT 270 (619)
+| .|..-.++...+. ++. ..| ++.+.+.+.+.+......+++.
T Consensus 318 -~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 318 -FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp -SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred -cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2655544444433 222 223 2345666766666666665553
No 14
>TIGR00909 2A0306 amino acid transporter.
Probab=71.17 E-value=14 Score=40.15 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHhhhcccchhhh---hhhhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHHHhhcCcccc-eeec
Q 007066 35 ILACVILVGLFALQHFGTHKVA---VMFAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKYFRETGKTGW-ISLG 110 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg---~~FgPIm~vWF~~i~~~Gi~ni~~~~p~Vl~AlnP~ya~~f~~~~~~~g~-~~LG 110 (619)
.++++++++...+..+|.+..+ .+++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 4567777888888988966554 5566665554444444454432 32222222221 11222 1233
Q ss_pred ceeeeecchhhhhc--cCCCCcccceeeehhhhhhhHHHhhcccchhhhccC-C-c---cccCcce----eeccCcchHH
Q 007066 111 GLLLCITGTEAMFA--DLGHFTALSIRLAFTFFVYPCLVVQYMGQAAYLSKN-L-D---KIPNSFY----DSIPEPVFWP 179 (619)
Q Consensus 111 ~V~L~iTG~EALyA--DlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~-p-~---~~~npFy----~~~P~~~~~P 179 (619)
..+.+.+|=|+.-. +-=+-.+|++..|-..-+.-+ .+.|+.-....... | + +.++|+. +...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45566677776543 333445567776654322222 22244433222221 1 1 1223432 2222333333
Q ss_pred HHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCce
Q 007066 180 VFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 215 (619)
Q Consensus 180 ~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ 215 (619)
+.+.+.++..-+..+.+.+.==+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 333344433333333333333334444578999973
No 15
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=69.81 E-value=26 Score=38.94 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=13.7
Q ss_pred cchHHHHHHHHHHHHHHHh
Q 007066 314 GWVPLVLSSVFMVVMYIWH 332 (619)
Q Consensus 314 GW~pl~ia~~~~~iM~~W~ 332 (619)
-|.+++++++++....-|.
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888776666555
No 16
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=68.77 E-value=17 Score=40.49 Aligned_cols=25 Identities=8% Similarity=-0.063 Sum_probs=18.2
Q ss_pred ehhHHHHHHHHHhhhcccchhhhhh
Q 007066 34 LILACVILVGLFALQHFGTHKVAVM 58 (619)
Q Consensus 34 v~is~~ILv~LF~~Q~~GT~kvg~~ 58 (619)
..+.+++++++..+.-+|.+..+++
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 4566777788888898987665544
No 17
>PRK15049 L-asparagine permease; Provisional
Probab=68.74 E-value=27 Score=39.43 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHhhhcccchhhhh---hhhhHHHHHHHHHHHHHHH
Q 007066 35 ILACVILVGLFALQHFGTHKVAV---MFAPIIIVWLISIFAVGLY 76 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg~---~FgPIm~vWF~~i~~~Gi~ 76 (619)
.++.++++++..+.-+|....++ .+.=+.++=++.+.++|+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~ 190 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTV 190 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777888889899776665 4443333333333344444
No 18
>TIGR00930 2a30 K-Cl cotransporter.
Probab=62.45 E-value=2.3e+02 Score=35.29 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=18.7
Q ss_pred EehhHHHHHHHHHhhhcccchhhhh
Q 007066 33 LLILACVILVGLFALQHFGTHKVAV 57 (619)
Q Consensus 33 vv~is~~ILv~LF~~Q~~GT~kvg~ 57 (619)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3457778888888888899865554
No 19
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=59.59 E-value=70 Score=35.62 Aligned_cols=44 Identities=7% Similarity=-0.160 Sum_probs=27.0
Q ss_pred ccCcchHHHHHHHHHHHHhhhhheeehhhhHHHHHHHhCCCCce
Q 007066 172 IPEPVFWPVFVVATLSAIVGSQAIITATFSIVKQCHSLGCFPRV 215 (619)
Q Consensus 172 ~P~~~~~P~~vlAtlAtIIASQA~ISg~FSl~~Qai~Lg~~Pr~ 215 (619)
..+|..+.+.+.+.+++.-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555555555555555555555666666788999965
No 20
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=58.80 E-value=37 Score=34.03 Aligned_cols=21 Identities=10% Similarity=0.385 Sum_probs=17.4
Q ss_pred CcchHHHHHHHHHHHHHHHhH
Q 007066 313 GGWVPLVLSSVFMVVMYIWHY 333 (619)
Q Consensus 313 GGW~pl~ia~~~~~iM~~W~~ 333 (619)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999988876654
No 21
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=56.03 E-value=69 Score=33.79 Aligned_cols=85 Identities=9% Similarity=0.063 Sum_probs=51.0
Q ss_pred hHhhhcceeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH----HHHHHHHHHhhccccCCcc---------hHHHH
Q 007066 254 IGNAYGLACMTVMFITTFLMALIIIFVWYKSIFLAGAFLLFFL----AIEGVYLSAAFIKVPQGGW---------VPLVL 320 (619)
Q Consensus 254 l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~----~ie~~f~sanl~Ki~~GGW---------~pl~i 320 (619)
-=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++ .+|-..+|+.-.+-..+.. +.+++
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvli 93 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLI 93 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 3456888888888888888888888888888777666655554 4565555543222211111 23444
Q ss_pred HHHHHHHHHHHhHhHHHH
Q 007066 321 SSVFMVVMYIWHYGTRKK 338 (619)
Q Consensus 321 a~~~~~iM~~W~~G~~~~ 338 (619)
|.++...+..+-+..++.
T Consensus 94 aivIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 94 AIVISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444555555555555544
No 22
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=53.83 E-value=12 Score=38.73 Aligned_cols=30 Identities=27% Similarity=0.691 Sum_probs=25.7
Q ss_pred ccCCcchHHHHHHHHHHHHHHHhHhHHHHH
Q 007066 310 VPQGGWVPLVLSSVFMVVMYIWHYGTRKKY 339 (619)
Q Consensus 310 i~~GGW~pl~ia~~~~~iM~~W~~G~~~~~ 339 (619)
=.+|||+.++.++++..+..+|+|--+.+.
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 348999999999999999999999666554
No 23
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=52.77 E-value=17 Score=39.23 Aligned_cols=89 Identities=22% Similarity=0.501 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhhcccchhhhh--hhhhHHHHHHHHHHHHHHH---------------------hhcccCcceeeecChHH
Q 007066 37 ACVILVGLFALQHFGTHKVAV--MFAPIIIVWLISIFAVGLY---------------------NVIHWNPKVISAISPLY 93 (619)
Q Consensus 37 s~~ILv~LF~~Q~~GT~kvg~--~FgPIm~vWF~~i~~~Gi~---------------------ni~~~~p~Vl~AlnP~y 93 (619)
+++.++=.|+-| +|-.++|+ +-|-+.+.|.++-...++. -++||-|+..
T Consensus 213 t~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~------- 284 (372)
T KOG3145|consen 213 TVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAY------- 284 (372)
T ss_pred HHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh-------
Confidence 344444444444 45666776 5666666665544433322 2344444322
Q ss_pred HHHHHhhcCcccceeecceeeeecchhh-----------------hhccCCCCcccceee
Q 007066 94 IIKYFRETGKTGWISLGGLLLCITGTEA-----------------MFADLGHFTALSIRL 136 (619)
Q Consensus 94 a~~f~~~~~~~g~~~LG~V~L~iTG~EA-----------------LyADlGHFg~~~Ir~ 136 (619)
.=+.|....|| +.|+|+|=+|||-| .|+|+|-||-.=+.+
T Consensus 285 --mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 285 --MNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred --hcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 11344446777 78999999999965 689999999654443
No 24
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=46.48 E-value=58 Score=35.74 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHhhhcccchhhhhhh
Q 007066 35 ILACVILVGLFALQHFGTHKVAVMF 59 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg~~F 59 (619)
.+++++++++..+.-+|.+..+++-
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i~ 147 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKLE 147 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4566667777888889988777653
No 25
>PRK11021 putative transporter; Provisional
Probab=44.46 E-value=2.6e+02 Score=30.42 Aligned_cols=28 Identities=25% Similarity=0.265 Sum_probs=21.9
Q ss_pred EehhHHHHHHHHHhhhcccchhhhhhhh
Q 007066 33 LLILACVILVGLFALQHFGTHKVAVMFA 60 (619)
Q Consensus 33 vv~is~~ILv~LF~~Q~~GT~kvg~~Fg 60 (619)
..++++++++++..+.-+|.+..+++-.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3467788888889999999888887543
No 26
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=44.30 E-value=2.6e+02 Score=32.30 Aligned_cols=44 Identities=25% Similarity=0.367 Sum_probs=26.5
Q ss_pred EehhHHHHHHHHHhhhcccchhhhhh---hhhHHHHHHHHHHHHHHH
Q 007066 33 LLILACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLY 76 (619)
Q Consensus 33 vv~is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~i~~~Gi~ 76 (619)
...+++++++++..+--+|+...+++ +.-+.++-++.+.+.|+.
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~ 207 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFT 207 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 34466777777778888997666653 444434434444455554
No 27
>PRK10746 putative transport protein YifK; Provisional
Probab=43.43 E-value=1.1e+02 Score=34.31 Aligned_cols=25 Identities=8% Similarity=0.098 Sum_probs=17.4
Q ss_pred cchHHHHHHHHHHHHHHHhHhHHHH
Q 007066 314 GWVPLVLSSVFMVVMYIWHYGTRKK 338 (619)
Q Consensus 314 GW~pl~ia~~~~~iM~~W~~G~~~~ 338 (619)
.......+.+++.++..++...+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567778888888777777665443
No 28
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=42.91 E-value=11 Score=40.17 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=25.1
Q ss_pred CCCCcccceeeehhhhhhhHHHhhcccchh-----hhccCCcccc-Cc
Q 007066 126 LGHFTALSIRLAFTFFVYPCLVVQYMGQAA-----YLSKNLDKIP-NS 167 (619)
Q Consensus 126 lGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA-----~ll~~p~~~~-np 167 (619)
=+++||.+||++|-. ..||+. =||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 369999999999988 445543 4788998765 55
No 29
>PRK10249 phenylalanine transporter; Provisional
Probab=42.51 E-value=1.1e+02 Score=33.99 Aligned_cols=102 Identities=22% Similarity=0.237 Sum_probs=53.1
Q ss_pred hHHHHHHHHHhhhcccchhhhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecChHHHHHH--HhhcCccc-ceee
Q 007066 36 LACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYNVIHWNPKVISAISPLYIIKY--FRETGKTG-WISL 109 (619)
Q Consensus 36 is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~i~~~Gi~ni~~~~p~Vl~AlnP~ya~~f--~~~~~~~g-~~~L 109 (619)
++.++++++..+.-+|....|++ +.=+.++..+.+-++|+.-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 46666777778888888766643 333444555555556665443322210 1111111000 01123333 3455
Q ss_pred cceeeeecchhhh--hccCCCCcccceeeehh
Q 007066 110 GGLLLCITGTEAM--FADLGHFTALSIRLAFT 139 (619)
Q Consensus 110 G~V~L~iTG~EAL--yADlGHFg~~~Ir~aw~ 139 (619)
..++.+.+|-|.. .|+=-+-.+|+|-.+=.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 6667788898865 55555666676655533
No 30
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=41.28 E-value=2.1e+02 Score=31.48 Aligned_cols=43 Identities=9% Similarity=0.260 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHhhhcccch---hhhhhhhhHHHHHHHHHHHHHHHh
Q 007066 35 ILACVILVGLFALQHFGTH---KVAVMFAPIIIVWLISIFAVGLYN 77 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~---kvg~~FgPIm~vWF~~i~~~Gi~n 77 (619)
.+++++++.+..+.-+|.+ |+...+.=+.++=++.+.++|+..
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~ 174 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW 174 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666777788989875 444444434444444555556654
No 31
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=41.24 E-value=86 Score=34.96 Aligned_cols=24 Identities=25% Similarity=0.195 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHhhhcccchhhhhh
Q 007066 35 ILACVILVGLFALQHFGTHKVAVM 58 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg~~ 58 (619)
.++++++++++.+.-+|+...+++
T Consensus 131 ~~~~~~~~~~~~ln~~Gi~~~~~i 154 (473)
T TIGR00905 131 LGASVLLWVFTFLVLRGVRQAAFI 154 (473)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345666667788999999776654
No 32
>PRK10238 aromatic amino acid transporter; Provisional
Probab=40.98 E-value=1.1e+02 Score=34.17 Aligned_cols=113 Identities=21% Similarity=0.259 Sum_probs=53.1
Q ss_pred hHHHHHHHHHhhhcccchhhhhh---hhhHHHHHHHHHHHHHHHhhccc--Ccc-eeeecChHHHHHHHhhcCcccc-ee
Q 007066 36 LACVILVGLFALQHFGTHKVAVM---FAPIIIVWLISIFAVGLYNVIHW--NPK-VISAISPLYIIKYFRETGKTGW-IS 108 (619)
Q Consensus 36 is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~i~~~Gi~ni~~~--~p~-Vl~AlnP~ya~~f~~~~~~~g~-~~ 108 (619)
.+++++++++.+.-+|+...|++ +.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 45556667788888898766643 33333333333333344332221 121 11111000 00011222222 23
Q ss_pred ecceeeeecchhh--hhccCCCCcccceeeehhhhhhhHHHhhccc
Q 007066 109 LGGLLLCITGTEA--MFADLGHFTALSIRLAFTFFVYPCLVVQYMG 152 (619)
Q Consensus 109 LG~V~L~iTG~EA--LyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~G 152 (619)
++.++.+.+|-|+ ..|+=-+=.+|++-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 5556778888887 3444445666777766432 33444455654
No 33
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=40.55 E-value=23 Score=39.91 Aligned_cols=91 Identities=23% Similarity=0.342 Sum_probs=59.2
Q ss_pred HhCCCCceeEEecCCccCC----ceeechhhHHHHHHHhheeEEecCchhhHhhhcceeehhHHHHHHHHHHHHH-----
Q 007066 208 SLGCFPRVKVVHTSRHIYG----QIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFITTFLMALIII----- 278 (619)
Q Consensus 208 ~Lg~~Pr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~----- 278 (619)
+-|-.||+.+...=++..| |+|+|.+= ++. +-=|-.-=|-++-.+=-.++||.+..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L---iVi-lSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL---IVI-LSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh---hhH-HhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3689999999999888888 99999852 111 1111122355566667889999999999998764221
Q ss_pred HHHhhhhhHHHHHHHHHHH-HHHHH
Q 007066 279 FVWYKSIFLAGAFLLFFLA-IEGVY 302 (619)
Q Consensus 279 ~~w~~~~~~~~~~~~~F~~-ie~~f 302 (619)
.+.-.-+++.++|+.+|++ +|-++
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA~ 325 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYAA 325 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHHH
Confidence 2233344556677777755 45443
No 34
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=38.57 E-value=2.3e+02 Score=31.29 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=16.4
Q ss_pred hHHHHHHHHHhhhcccchhhhhh
Q 007066 36 LACVILVGLFALQHFGTHKVAVM 58 (619)
Q Consensus 36 is~~ILv~LF~~Q~~GT~kvg~~ 58 (619)
+.+++++++..+.-+|++..+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45566667778888998776654
No 35
>PRK11387 S-methylmethionine transporter; Provisional
Probab=35.72 E-value=1.6e+02 Score=32.75 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhhcccchhhhh
Q 007066 37 ACVILVGLFALQHFGTHKVAV 57 (619)
Q Consensus 37 s~~ILv~LF~~Q~~GT~kvg~ 57 (619)
.+++++++..+.-+|....++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 444455667778888876664
No 36
>PRK10580 proY putative proline-specific permease; Provisional
Probab=35.69 E-value=1.6e+02 Score=32.62 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=19.2
Q ss_pred CCcchHHHHHHHHHHHHHHHhHhHH
Q 007066 312 QGGWVPLVLSSVFMVVMYIWHYGTR 336 (619)
Q Consensus 312 ~GGW~pl~ia~~~~~iM~~W~~G~~ 336 (619)
.+.++.+.++.+.+.+.+.++.-.+
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~~ 447 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFKR 447 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567788888888888888886643
No 37
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=34.72 E-value=4.3e+02 Score=29.17 Aligned_cols=45 Identities=9% Similarity=0.183 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHhhhcccchhhhhhhhh---HHHHHHHHHHHHHHHhhc
Q 007066 35 ILACVILVGLFALQHFGTHKVAVMFAP---IIIVWLISIFAVGLYNVI 79 (619)
Q Consensus 35 ~is~~ILv~LF~~Q~~GT~kvg~~FgP---Im~vWF~~i~~~Gi~ni~ 79 (619)
.+++++++++..+.-+|+...+++--. +.++-++.+-++|+..+.
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~ 175 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIF 175 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666667777888898777755433 333333344445554443
No 38
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=31.10 E-value=1.6e+02 Score=32.76 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHHhHhHH
Q 007066 316 VPLVLSSVFMVVMYIWHYGTR 336 (619)
Q Consensus 316 ~pl~ia~~~~~iM~~W~~G~~ 336 (619)
++..++..++..++.+++-.+
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~ 464 (478)
T TIGR00913 444 FEAYLSLPIFIALYIGHKVYK 464 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 456677777777777776654
No 39
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=29.58 E-value=3.2e+02 Score=31.05 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=22.4
Q ss_pred ceeeeecchhhh--hccCCCCcccceeeehhhhhhhHHHhhcccc
Q 007066 111 GLLLCITGTEAM--FADLGHFTALSIRLAFTFFVYPCLVVQYMGQ 153 (619)
Q Consensus 111 ~V~L~iTG~EAL--yADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ 153 (619)
+++.+.+|-|+. .|+==+-.+|.+-.|=...+.-+.++.++|-
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~ 246 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGG 246 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 445667888865 4444455566655554443333334434433
No 40
>PRK10519 hypothetical protein; Provisional
Probab=26.90 E-value=35 Score=33.23 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=38.1
Q ss_pred HhhhhccccccCCCCCCeEehhHHHHHHHHHhhhccc-chhhhhhhhhHHHHHHH
Q 007066 15 LSSVSGLQVTENKLTDGELLILACVILVGLFALQHFG-THKVAVMFAPIIIVWLI 68 (619)
Q Consensus 15 LSAveGl~v~~p~l~~~~vv~is~~ILv~LF~~Q~~G-T~kvg~~FgPIm~vWF~ 68 (619)
=+|-||+++.. + .++|.-+...+++-.+|+.| -+.++..|+|+| -||-
T Consensus 13 ~GakeG~~i~~---~--~iiP~li~~~v~I~iL~~sG~ld~l~~~l~Pvm-~llG 61 (151)
T PRK10519 13 DGARKGFTIAT---T--NLLPNVLMAFVIIQALNITGLLDLVGHIFGPVM-ALFG 61 (151)
T ss_pred HHHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH-HHhC
Confidence 36778888752 1 27788899999999999999 677999999999 3553
No 41
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=23.90 E-value=64 Score=25.19 Aligned_cols=28 Identities=32% Similarity=0.678 Sum_probs=13.8
Q ss_pred HHHHHHHHHhHhHHHHHhhhhccCCChH
Q 007066 323 VFMVVMYIWHYGTRKKYNFDLHNKVSLR 350 (619)
Q Consensus 323 ~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 350 (619)
+++.....|.+-++++.+++...+++++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3344444555544445555555555544
No 42
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=23.23 E-value=18 Score=36.07 Aligned_cols=70 Identities=24% Similarity=0.427 Sum_probs=50.3
Q ss_pred CCCCChhHHHHHHHHHHHHHcCcEE-EeeceEEEecCCCchHHHHHHHHHHHHH---hhhcCCCCcccccCCCCEEEee
Q 007066 540 DPGMDPAVREELMDLIQAKEAGIAY-IMGHSYVKARRSSSFVKRFMIDILYSFL---RKNCRGPSVALNIPHISLIEVG 614 (619)
Q Consensus 540 ~~~~~~~v~eEl~~L~~A~eaGVvY-IlG~~~v~ar~~S~~~Kk~~In~~Y~FL---RkNcR~~~~~L~IP~~~lleVG 614 (619)
+++.+|++++-++ +++++|+-- |..+ .+.++=..+..|+=+|++|.-. +++.|.....+++|.++.+-||
T Consensus 44 ~~~~tpe~~~W~~---e~k~~gi~v~vvSN--n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 44 NPDATPELRAWLA---ELKEAGIKVVVVSN--NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred CCCCCHHHHHHHH---HHHhcCCEEEEEeC--CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 3444566655555 466778754 4444 5566666788888899877663 5778888899999999999988
No 43
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=22.74 E-value=47 Score=28.84 Aligned_cols=15 Identities=33% Similarity=0.685 Sum_probs=11.0
Q ss_pred HHHHHhhhcCCCCcc
Q 007066 588 LYSFLRKNCRGPSVA 602 (619)
Q Consensus 588 ~Y~FLRkNcR~~~~~ 602 (619)
=|.|||+|||.+.-.
T Consensus 25 ~~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 25 PYEWLRDNCPCAECR 39 (89)
T ss_dssp EHHHHHHT-SSSSTC
T ss_pred CHHHHhccCCChhhc
Confidence 379999999987644
No 44
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=22.32 E-value=1.1e+03 Score=26.25 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=18.0
Q ss_pred ehhHHHHHHHHHhhhcccchhhhhh
Q 007066 34 LILACVILVGLFALQHFGTHKVAVM 58 (619)
Q Consensus 34 v~is~~ILv~LF~~Q~~GT~kvg~~ 58 (619)
..++.+++++...+.-+|++..+++
T Consensus 145 ~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 145 VLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4566667777888888998766654
Done!