Query 007069
Match_columns 619
No_of_seqs 453 out of 2738
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 18:29:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.5E-77 3.3E-82 631.0 39.1 399 173-614 42-452 (452)
2 PLN02533 probable purple acid 100.0 6.4E-70 1.4E-74 591.6 43.2 378 171-607 39-425 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 2.5E-47 5.4E-52 397.3 31.2 282 292-599 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 4.1E-33 8.8E-38 294.6 28.1 270 292-604 25-334 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 6.8E-31 1.5E-35 271.4 24.4 247 294-589 1-277 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 99.9 1.7E-26 3.8E-31 236.9 22.2 241 292-584 3-260 (262)
7 KOG2679 Purple (tartrate-resis 99.9 1.5E-25 3.4E-30 219.6 18.7 259 290-600 40-330 (336)
8 cd07402 MPP_GpdQ Enterobacter 99.9 1.4E-22 3.1E-27 204.7 21.1 229 295-576 1-238 (240)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 9.1E-22 2E-26 202.6 20.7 207 294-546 1-246 (267)
10 PF09423 PhoD: PhoD-like phosp 99.9 2.7E-20 5.8E-25 205.7 26.4 312 244-583 60-453 (453)
11 PRK11148 cyclic 3',5'-adenosin 99.8 1.3E-19 2.7E-24 187.5 24.2 239 292-585 13-260 (275)
12 cd07401 MPP_TMEM62_N Homo sapi 99.8 1.7E-19 3.7E-24 184.5 18.6 195 296-516 2-216 (256)
13 COG3540 PhoD Phosphodiesterase 99.8 2.7E-19 5.9E-24 188.4 16.0 247 244-512 97-420 (522)
14 cd07399 MPP_YvnB Bacillus subt 99.8 6.8E-19 1.5E-23 175.4 15.9 160 294-514 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.7 2.3E-16 5E-21 164.8 17.0 181 322-514 57-265 (296)
16 cd07383 MPP_Dcr2 Saccharomyces 99.7 2.6E-15 5.6E-20 147.9 17.0 166 293-514 2-180 (199)
17 PF00149 Metallophos: Calcineu 99.7 1.2E-16 2.5E-21 148.9 6.6 198 294-510 1-200 (200)
18 cd08163 MPP_Cdc1 Saccharomyces 99.6 1.8E-15 3.8E-20 154.6 15.1 162 332-513 44-231 (257)
19 cd07393 MPP_DR1119 Deinococcus 99.6 4.9E-15 1.1E-19 149.5 14.6 202 296-544 1-226 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 1.5E-13 3.2E-18 148.4 23.2 99 412-514 290-396 (496)
21 PF14008 Metallophos_C: Iron/z 99.5 1.6E-14 3.4E-19 115.0 6.8 62 534-595 1-62 (62)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.5 4.6E-13 9.9E-18 129.6 16.8 168 296-511 1-174 (188)
23 TIGR03729 acc_ester putative p 99.4 2.9E-12 6.4E-17 129.8 16.9 185 295-511 1-222 (239)
24 cd07385 MPP_YkuE_C Bacillus su 99.4 1.4E-12 3.1E-17 130.1 13.4 198 294-546 2-206 (223)
25 cd07400 MPP_YydB Bacillus subt 99.4 2.1E-12 4.5E-17 120.2 13.2 125 296-513 1-128 (144)
26 COG1409 Icc Predicted phosphoh 99.4 4.7E-12 1E-16 131.1 17.3 184 294-510 1-193 (301)
27 TIGR03768 RPA4764 metallophosp 99.4 1.2E-11 2.6E-16 132.4 19.1 97 412-510 291-411 (492)
28 cd07388 MPP_Tt1561 Thermus the 99.3 4.5E-11 9.8E-16 119.5 18.4 174 293-508 4-189 (224)
29 cd07404 MPP_MS158 Microscilla 99.3 1.2E-11 2.7E-16 118.0 11.2 150 296-511 1-150 (166)
30 PRK11340 phosphodiesterase Yae 99.3 4.2E-11 9E-16 123.7 15.8 170 292-518 48-222 (271)
31 cd00840 MPP_Mre11_N Mre11 nucl 99.3 2.3E-11 5E-16 121.1 12.7 198 295-513 1-204 (223)
32 KOG1432 Predicted DNA repair e 99.2 1.9E-09 4.2E-14 110.4 20.0 88 291-379 51-147 (379)
33 PF12850 Metallophos_2: Calcin 99.1 9.7E-10 2.1E-14 103.0 13.8 153 294-573 1-153 (156)
34 cd00838 MPP_superfamily metall 99.1 1.8E-09 4E-14 96.6 12.7 96 331-514 24-119 (131)
35 COG1408 Predicted phosphohydro 99.0 2.1E-09 4.5E-14 111.3 12.9 78 291-380 42-119 (284)
36 cd00841 MPP_YfcE Escherichia c 98.9 2.2E-08 4.7E-13 94.3 15.4 59 295-379 1-59 (155)
37 cd07379 MPP_239FB Homo sapiens 98.9 2.2E-08 4.7E-13 92.4 11.8 117 295-511 1-117 (135)
38 cd07397 MPP_DevT Myxococcus xa 98.9 6.5E-08 1.4E-12 97.2 15.7 64 294-380 1-64 (238)
39 cd08166 MPP_Cdc1_like_1 unchar 98.8 1.6E-08 3.4E-13 98.6 9.4 48 332-379 41-93 (195)
40 cd07394 MPP_Vps29 Homo sapiens 98.8 1E-06 2.2E-11 85.4 20.5 170 295-590 1-170 (178)
41 TIGR00040 yfcE phosphoesterase 98.8 2.8E-07 6.1E-12 87.3 15.8 63 294-378 1-63 (158)
42 PRK05340 UDP-2,3-diacylglucosa 98.7 3.7E-08 8.1E-13 100.0 10.0 182 294-512 1-201 (241)
43 COG2129 Predicted phosphoester 98.7 1.5E-06 3.2E-11 85.4 18.8 176 293-512 3-189 (226)
44 cd08165 MPP_MPPE1 human MPPE1 98.7 1.9E-07 4.1E-12 88.5 12.3 56 323-379 29-89 (156)
45 PF14582 Metallophos_3: Metall 98.6 1.4E-07 3E-12 92.3 10.0 181 294-514 6-222 (255)
46 cd07403 MPP_TTHA0053 Thermus t 98.6 1.5E-07 3.3E-12 86.2 9.8 50 459-514 58-107 (129)
47 KOG3770 Acid sphingomyelinase 98.6 4.3E-07 9.4E-12 99.9 13.2 176 322-512 199-406 (577)
48 cd07384 MPP_Cdc1_like Saccharo 98.6 1.7E-07 3.8E-12 90.1 8.0 57 322-379 35-100 (171)
49 TIGR00583 mre11 DNA repair pro 98.5 1.8E-06 4E-11 93.7 16.4 84 293-379 3-123 (405)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 1.2E-06 2.6E-11 88.4 13.6 74 297-379 2-81 (231)
51 COG1768 Predicted phosphohydro 98.5 1.3E-06 2.8E-11 82.2 12.2 148 332-514 42-203 (230)
52 PRK09453 phosphodiesterase; Pr 98.5 9.7E-06 2.1E-10 78.7 18.3 71 294-379 1-76 (182)
53 cd00845 MPP_UshA_N_like Escher 98.4 4.4E-06 9.5E-11 85.2 14.3 188 294-512 1-208 (252)
54 cd08164 MPP_Ted1 Saccharomyces 98.4 1.8E-06 3.8E-11 84.2 10.0 49 331-380 42-112 (193)
55 cd07410 MPP_CpdB_N Escherichia 98.4 1.7E-05 3.6E-10 82.3 17.4 198 294-511 1-231 (277)
56 cd07389 MPP_PhoD Bacillus subt 98.3 2.5E-06 5.4E-11 85.6 9.2 138 332-513 28-207 (228)
57 cd07406 MPP_CG11883_N Drosophi 98.3 1.2E-05 2.7E-10 82.4 13.4 186 294-511 1-208 (257)
58 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.2 2.4E-05 5.2E-10 80.4 15.1 191 296-516 1-235 (262)
59 cd07382 MPP_DR1281 Deinococcus 98.2 6.3E-05 1.4E-09 76.9 17.8 196 295-547 1-201 (255)
60 cd07398 MPP_YbbF-LpxH Escheric 98.2 5.3E-06 1.1E-10 82.4 9.2 74 297-379 1-82 (217)
61 TIGR00282 metallophosphoestera 98.1 0.00022 4.7E-09 73.3 17.6 197 294-547 1-204 (266)
62 cd07411 MPP_SoxB_N Thermus the 98.0 0.00022 4.7E-09 73.5 17.5 190 294-511 1-220 (264)
63 cd07412 MPP_YhcR_N Bacillus su 98.0 0.00054 1.2E-08 71.5 18.8 85 294-380 1-89 (288)
64 cd07425 MPP_Shelphs Shewanella 97.9 2.3E-05 5E-10 77.9 7.5 65 297-379 1-80 (208)
65 TIGR00619 sbcd exonuclease Sbc 97.9 2.7E-05 5.8E-10 79.8 7.8 83 294-379 1-88 (253)
66 COG0622 Predicted phosphoester 97.9 0.00092 2E-08 64.3 17.6 64 294-379 2-65 (172)
67 cd07407 MPP_YHR202W_N Saccharo 97.8 0.00046 1E-08 71.8 15.6 198 293-510 5-231 (282)
68 COG0420 SbcD DNA repair exonuc 97.8 3.4E-05 7.3E-10 84.0 7.5 83 294-379 1-88 (390)
69 PRK10966 exonuclease subunit S 97.8 6.8E-05 1.5E-09 81.9 8.3 83 294-379 1-87 (407)
70 cd07405 MPP_UshA_N Escherichia 97.7 0.00046 9.9E-09 72.0 14.0 51 454-511 172-222 (285)
71 PHA02546 47 endonuclease subun 97.7 7E-05 1.5E-09 80.1 8.0 83 294-379 1-89 (340)
72 cd07408 MPP_SA0022_N Staphyloc 97.7 0.00044 9.4E-09 71.0 13.4 80 294-380 1-83 (257)
73 KOG3662 Cell division control 97.7 0.00015 3.2E-09 77.8 9.7 126 291-433 46-183 (410)
74 cd07380 MPP_CWF19_N Schizosacc 97.7 0.00017 3.7E-09 67.8 8.3 115 321-518 14-130 (150)
75 cd07409 MPP_CD73_N CD73 ecto-5 97.6 0.00077 1.7E-08 70.1 13.1 79 414-511 131-219 (281)
76 COG2908 Uncharacterized protei 97.6 0.00013 2.7E-09 72.7 6.5 72 298-379 2-80 (237)
77 PRK09558 ushA bifunctional UDP 97.5 0.0013 2.9E-08 74.9 14.6 200 291-511 32-258 (551)
78 PRK09419 bifunctional 2',3'-cy 97.5 0.0012 2.7E-08 81.4 14.8 196 290-511 657-883 (1163)
79 COG0737 UshA 5'-nucleotidase/2 97.4 0.00056 1.2E-08 77.3 10.0 205 288-510 21-247 (517)
80 cd07391 MPP_PF1019 Pyrococcus 97.1 0.00083 1.8E-08 64.5 6.4 54 324-379 33-88 (172)
81 PRK00166 apaH diadenosine tetr 97.1 0.0011 2.4E-08 68.6 7.3 65 295-379 2-69 (275)
82 cd07423 MPP_PrpE Bacillus subt 97.1 0.0011 2.5E-08 66.9 7.1 66 295-378 2-79 (234)
83 cd07386 MPP_DNA_pol_II_small_a 97.0 0.0013 2.8E-08 66.9 6.9 76 297-379 2-94 (243)
84 TIGR01530 nadN NAD pyrophospha 97.0 0.0095 2.1E-07 67.9 14.4 79 413-511 129-219 (550)
85 TIGR00024 SbcD_rel_arch putati 97.0 0.0012 2.6E-08 66.4 6.1 84 294-379 15-102 (225)
86 cd07390 MPP_AQ1575 Aquifex aeo 97.0 0.0013 2.9E-08 62.9 6.1 77 297-379 2-82 (168)
87 PHA02239 putative protein phos 97.0 0.0016 3.5E-08 65.9 6.8 67 295-379 2-73 (235)
88 PRK13625 bis(5'-nucleosyl)-tet 97.0 0.0019 4.1E-08 65.8 7.3 66 295-378 2-78 (245)
89 cd07424 MPP_PrpA_PrpB PrpA and 96.9 0.0025 5.3E-08 63.2 7.2 63 295-379 2-67 (207)
90 COG4186 Predicted phosphoester 96.8 0.017 3.7E-07 53.7 11.6 80 295-379 5-86 (186)
91 cd07413 MPP_PA3087 Pseudomonas 96.8 0.0029 6.3E-08 63.5 7.2 66 296-379 1-76 (222)
92 PRK04036 DNA polymerase II sma 96.8 0.0036 7.7E-08 70.5 8.6 82 291-379 241-343 (504)
93 cd08162 MPP_PhoA_N Synechococc 96.8 0.01 2.2E-07 62.8 11.0 39 454-511 206-245 (313)
94 PRK11439 pphA serine/threonine 96.7 0.004 8.7E-08 62.3 6.8 63 295-379 18-83 (218)
95 PRK11907 bifunctional 2',3'-cy 96.6 0.023 4.9E-07 67.1 13.8 96 284-381 106-215 (814)
96 COG1692 Calcineurin-like phosp 96.6 0.26 5.6E-06 49.5 19.0 198 294-546 1-202 (266)
97 PRK09968 serine/threonine-spec 96.5 0.0067 1.4E-07 60.7 7.1 62 295-378 16-80 (218)
98 PRK09419 bifunctional 2',3'-cy 96.4 0.022 4.7E-07 70.7 12.5 48 454-511 233-281 (1163)
99 cd07422 MPP_ApaH Escherichia c 96.4 0.007 1.5E-07 62.1 6.9 63 297-379 2-67 (257)
100 cd07387 MPP_PolD2_C PolD2 (DNA 96.3 0.12 2.6E-06 53.0 14.9 136 296-450 2-176 (257)
101 KOG2310 DNA repair exonuclease 96.3 0.017 3.7E-07 63.3 9.1 54 292-348 12-67 (646)
102 PRK09418 bifunctional 2',3'-cy 96.3 0.086 1.9E-06 62.2 15.5 53 293-346 39-96 (780)
103 cd07421 MPP_Rhilphs Rhilph pho 96.2 0.013 2.9E-07 60.7 7.8 67 295-379 3-80 (304)
104 PF13277 YmdB: YmdB-like prote 96.1 0.084 1.8E-06 53.4 12.6 171 332-547 26-199 (253)
105 PF00041 fn3: Fibronectin type 96.1 0.018 3.9E-07 47.4 6.7 74 175-269 2-77 (85)
106 COG5555 Cytolysin, a secreted 96.1 0.008 1.7E-07 60.9 5.2 174 335-512 128-336 (392)
107 cd00144 MPP_PPP_family phospho 96.1 0.014 2.9E-07 58.2 6.9 65 297-379 1-68 (225)
108 TIGR01390 CycNucDiestase 2',3' 95.6 0.14 3.1E-06 59.2 13.7 86 293-380 2-100 (626)
109 PRK09420 cpdB bifunctional 2', 95.6 0.17 3.6E-06 58.9 14.1 87 292-380 24-123 (649)
110 TIGR00668 apaH bis(5'-nucleosy 95.5 0.032 6.9E-07 57.7 6.7 64 295-378 2-68 (279)
111 cd07381 MPP_CapA CapA and rela 95.3 0.16 3.5E-06 51.3 11.2 61 442-513 162-222 (239)
112 KOG2863 RNA lariat debranching 95.2 0.087 1.9E-06 55.3 9.0 184 294-509 1-229 (456)
113 cd07420 MPP_RdgC Drosophila me 95.1 0.052 1.1E-06 57.4 7.1 67 295-379 52-123 (321)
114 KOG4221 Receptor mediating net 95.1 0.53 1.2E-05 56.6 15.8 136 132-286 570-712 (1381)
115 smart00854 PGA_cap Bacterial c 94.7 0.47 1E-05 48.0 12.8 59 444-513 162-220 (239)
116 COG1407 Predicted ICC-like pho 94.7 0.095 2.1E-06 52.6 7.3 84 294-379 20-110 (235)
117 KOG0196 Tyrosine kinase, EPH ( 94.3 0.57 1.2E-05 54.2 12.9 41 247-287 497-537 (996)
118 cd07416 MPP_PP2B PP2B, metallo 94.2 0.13 2.8E-06 54.2 7.3 67 295-379 44-114 (305)
119 cd07418 MPP_PP7 PP7, metalloph 93.4 0.18 3.9E-06 54.4 6.9 67 295-379 67-138 (377)
120 cd00063 FN3 Fibronectin type 3 93.1 0.79 1.7E-05 36.8 9.0 38 246-283 55-92 (93)
121 smart00156 PP2Ac Protein phosp 92.9 0.34 7.4E-06 50.2 7.8 67 295-379 29-99 (271)
122 cd07415 MPP_PP2A_PP4_PP6 PP2A, 92.8 0.27 5.9E-06 51.3 6.9 67 295-379 43-113 (285)
123 cd07419 MPP_Bsu1_C Arabidopsis 92.5 0.35 7.6E-06 51.1 7.4 23 485-507 240-262 (311)
124 KOG3325 Membrane coat complex 92.4 1.2 2.5E-05 41.4 9.5 86 487-599 96-182 (183)
125 cd07414 MPP_PP1_PPKL PP1, PPKL 92.3 0.34 7.3E-06 50.8 6.9 24 486-509 221-244 (293)
126 PTZ00239 serine/threonine prot 91.6 0.49 1.1E-05 49.8 7.2 25 485-509 213-237 (303)
127 cd07417 MPP_PP5_C PP5, C-termi 91.6 0.48 1E-05 50.1 7.1 25 485-509 231-255 (316)
128 KOG3513 Neural cell adhesion m 91.5 10 0.00023 45.8 18.5 191 57-287 719-916 (1051)
129 COG1311 HYS2 Archaeal DNA poly 91.2 0.7 1.5E-05 50.8 8.0 78 292-379 224-321 (481)
130 PTZ00480 serine/threonine-prot 90.9 0.59 1.3E-05 49.5 6.9 25 485-509 229-253 (320)
131 PTZ00244 serine/threonine-prot 90.7 0.54 1.2E-05 49.3 6.4 24 486-509 223-246 (294)
132 KOG4419 5' nucleotidase [Nucle 88.3 3.6 7.8E-05 46.4 10.8 55 439-510 212-269 (602)
133 PF07888 CALCOCO1: Calcium bin 87.5 4.2 9.1E-05 45.8 10.8 93 71-185 22-124 (546)
134 smart00060 FN3 Fibronectin typ 85.9 5.5 0.00012 30.6 8.2 22 247-268 56-77 (83)
135 KOG4221 Receptor mediating net 82.7 28 0.00061 42.7 14.9 126 131-286 479-612 (1381)
136 PF09587 PGA_cap: Bacterial ca 82.2 3.9 8.4E-05 41.6 7.1 64 440-514 169-232 (250)
137 PF04042 DNA_pol_E_B: DNA poly 81.4 2.8 6.1E-05 41.2 5.6 74 296-379 1-91 (209)
138 KOG3947 Phosphoesterases [Gene 80.8 3.6 7.9E-05 42.1 6.0 65 292-380 60-127 (305)
139 PF10179 DUF2369: Uncharacteri 76.9 48 0.001 34.8 13.1 90 172-268 171-280 (300)
140 PTZ00235 DNA polymerase epsilo 69.6 20 0.00044 37.3 8.2 76 292-378 26-121 (291)
141 KOG2476 Uncharacterized conser 55.6 22 0.00047 39.1 5.6 70 294-376 6-75 (528)
142 KOG0372 Serine/threonine speci 49.4 44 0.00095 34.0 6.2 67 296-379 45-114 (303)
143 KOG0374 Serine/threonine speci 48.1 25 0.00055 37.5 4.7 23 486-508 232-254 (331)
144 TIGR02855 spore_yabG sporulati 40.9 44 0.00096 34.4 4.9 51 441-509 114-165 (283)
145 PF09294 Interfer-bind: Interf 37.9 41 0.00089 28.8 3.7 36 248-283 67-104 (106)
146 PF05582 Peptidase_U57: YabG p 35.9 62 0.0013 33.6 5.1 51 441-509 115-166 (287)
147 PF10179 DUF2369: Uncharacteri 31.7 1.4E+02 0.0031 31.3 7.1 21 248-268 15-35 (300)
148 cd02856 Glycogen_debranching_e 29.1 74 0.0016 27.4 3.9 24 244-267 43-66 (103)
149 KOG0371 Serine/threonine prote 28.5 1.3E+02 0.0029 30.9 5.9 66 296-379 62-131 (319)
150 KOG3513 Neural cell adhesion m 27.8 6.8E+02 0.015 31.0 12.5 131 134-287 577-714 (1051)
151 KOG0373 Serine/threonine speci 27.3 59 0.0013 32.5 3.1 66 296-379 48-117 (306)
152 TIGR02039 CysD sulfate adenyly 26.9 2.1E+02 0.0045 30.1 7.3 81 423-509 50-130 (294)
153 cd01987 USP_OKCHK USP domain i 26.7 3.2E+02 0.007 23.6 7.7 23 487-509 74-96 (124)
154 PF07353 Uroplakin_II: Uroplak 25.7 1E+02 0.0022 29.2 4.1 18 251-268 105-122 (184)
155 cd02853 MTHase_N_term Maltooli 25.0 96 0.0021 25.7 3.7 21 245-266 39-59 (85)
156 cd02860 Pullulanase_N_term Pul 24.7 95 0.0021 26.5 3.7 24 244-267 45-68 (100)
157 cd02852 Isoamylase_N_term Isoa 24.6 91 0.002 27.6 3.7 22 245-266 48-69 (119)
158 PF00879 Defensin_propep: Defe 23.1 1.7E+02 0.0036 22.5 4.1 16 64-79 35-50 (52)
159 PF06874 FBPase_2: Firmicute f 20.8 63 0.0014 37.2 2.2 50 324-380 176-225 (640)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-77 Score=630.99 Aligned_cols=399 Identities=41% Similarity=0.719 Sum_probs=332.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccc-cCcceEEecCCcCCCCCccccccCCCeEEEEE
Q 007069 173 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHS-PAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 251 (619)
Q Consensus 173 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~-~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 251 (619)
.++|+|+||++++..++|+|+|.|.+. ....|+||...+..... +.+.. ..+|+.... +|+..|++|+|+
T Consensus 42 ~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDAV 112 (452)
T ss_pred CCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeeee
Confidence 368999999999998899999999864 34899999765442211 11111 122333222 567899999999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc
Q 007069 252 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL 331 (619)
Q Consensus 252 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~ 331 (619)
|++|+|+|+||||||++ ..||++++|+|+| +++.+.+|+++||||...... ++.....+.
T Consensus 113 ~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~ 172 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEEN 172 (452)
T ss_pred ecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcc
Confidence 99999999999999985 3499999999998 455689999999999875421 233344443
Q ss_pred CCCCEEEEcCcccccCCch-hHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC-
Q 007069 332 KNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE- 409 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~- 409 (619)
.++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 173 ~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~ 241 (452)
T KOG1378|consen 173 LKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNS 241 (452)
T ss_pred cCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCc
Confidence 5799999999999999998 6999999999999999999999999999876543 55788999999954
Q ss_pred --CCCceEEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCcc-ccCCCCCCch
Q 007069 410 --NRAKFWYSTDYGMFRFCVADTEHDW--REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-YAVDGSFAEP 484 (619)
Q Consensus 410 --~~~~~~Ysfd~G~v~fi~Ldt~~~~--~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~-~~~~~~~~~~ 484 (619)
+..++|||||+|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |++... +..+|.. +.
T Consensus 242 s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~ 319 (452)
T KOG1378|consen 242 SESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ES 319 (452)
T ss_pred CCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hh
Confidence 3356999999999999999999985 356899999999999999887999999999999 766542 3445543 24
Q ss_pred hhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCC--CCCCCCCCCCcceee
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLYR 562 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~~ 562 (619)
+ |..||+||.+|+||++|+||+|.|||+||++|.+|.......+..++.|||||++|.||+. +..+..++|+||+||
T Consensus 320 ~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R 398 (452)
T KOG1378|consen 320 M-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFR 398 (452)
T ss_pred h-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCcccccc
Confidence 4 7899999999999999999999999999999999987666555568999999999999954 566666899999999
Q ss_pred eCcccEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEeCCCCccccccCCCCC
Q 007069 563 DYDYGFVKLTAFDHSNLLFEYKKS--SDGKVYDSFRISRDYRDILACTVGSCPS 614 (619)
Q Consensus 563 ~~~~Gy~~l~v~n~~~l~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 614 (619)
+.+|||++|+++|+|++.++++++ ..|+++|+|+|.|++.+...|....|.+
T Consensus 399 ~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 399 EGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred cccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 999999999999999999999985 3478999999999999999999988863
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=6.4e-70 Score=591.56 Aligned_cols=378 Identities=25% Similarity=0.444 Sum_probs=309.9
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCCccccccCCCeEEE
Q 007069 171 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRDPGYIHT 249 (619)
Q Consensus 171 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 249 (619)
+++..|+|+||++++ +++|+|+|.|... ..+.|+||++++....++.++ .+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 578899999999997 8999999999864 458999999877655544433 445421 123 4799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007069 250 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 329 (619)
Q Consensus 250 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~ 329 (619)
|+|+||+|+|+|+||||.. .+|+.++|+|+|.. .++||+++||+|.... ...+++++.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 35889999998852 4699999999986421 1245666654
Q ss_pred hcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC
Q 007069 330 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 409 (619)
Q Consensus 330 ~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 409 (619)
.+||||||+||++|++++..+|++|++.++++.+.+|+|+++||||.+... ....+...+|..+|.||.+
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999998899999999999999999999999999986321 0112233567789999953
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhh
Q 007069 410 ---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 486 (619)
Q Consensus 410 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~ 486 (619)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+||++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2457899999999999999999988888999999999999998888999999999999 87754322111 11233
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCC---CCCCCCCCCcceeee
Q 007069 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL---AEFTPLQTTWSLYRD 563 (619)
Q Consensus 487 r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 563 (619)
|+.|++||++|+||++|+||+|.|||++|+|++++ .++||+||++|+||+.. ..+..++|+|++||.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 34799999999999874 345667899999999
Q ss_pred CcccEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCCCCcccc
Q 007069 564 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDYRDILAC 607 (619)
Q Consensus 564 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~~~~~~~ 607 (619)
.+|||.+|++.|.++|++||+++.||+ +.|+|||+|-... -+|
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~ 425 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGC 425 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-Ccc
Confidence 999999999999999999999977774 8999999997544 344
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.5e-47 Score=397.29 Aligned_cols=282 Identities=39% Similarity=0.683 Sum_probs=223.7
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch--hHHHHHHHhhhhhhcCCCe
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~ 369 (619)
.++||+++||+|.... .+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~~-----------~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNTN-----------NSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCCC-----------CcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 4699999999997521 23567888877556899999999999988765 8999999999999999999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeecc---CCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP---AENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKF 443 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~W 443 (619)
++++||||........+... ...++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999875432211100 00012222 223467899999999999999999765 567899999
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceecc
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN 523 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~ 523 (619)
|+++|+++++.+.||+||++|+|+ |++....... ..... .++.|++||++|+|+++|+||+|.|+|++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~-~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEK-MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHH-HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999987667799999999999 7765432211 01122 3889999999999999999999999999999999886
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCC--CCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007069 524 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 599 (619)
Q Consensus 524 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k 599 (619)
.......+++|++||++|+||+.++..... .++|++++..++||++|++.++++|+++++.+.+|+|+|+|+|.|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222367899999999999988654332 358999999999999999988889999999999999999999987
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=4.1e-33 Score=294.65 Aligned_cols=270 Identities=18% Similarity=0.256 Sum_probs=190.4
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCc----hhHHHHHH-Hhhhhhh--
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFT-AQIEPIA-- 364 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~-~~i~~l~-- 364 (619)
..++|+++||+|.+.. -|......+.++.++ .++|||+.+||+. .+|. ..+|++-+ +.+.+..
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996421 133333445555544 6899999999998 5553 45666533 3343333
Q ss_pred cCCCeEEccCCCccCCCCCCC--CCCCC----CCCC--cc--ccccceeeeccCCCCCceEEEE----Ee----------
Q 007069 365 STVPYMIASGNHERDWPGTGS--FYGNK----DSGG--EC--GVLAETMFYVPAENRAKFWYST----DY---------- 420 (619)
Q Consensus 365 ~~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 420 (619)
.++||++++||||+..+.... .|... +.-. +- ......||.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999986432211 01100 0000 00 001136899983 57754 21
Q ss_pred ---CCEEEEEEeCCCC-----CC-CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHH
Q 007069 421 ---GMFRFCVADTEHD-----WR-EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 491 (619)
Q Consensus 421 ---G~v~fi~Ldt~~~-----~~-~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 491 (619)
..+.||+|||... +. ....|++||+++|+.+ ++.++|+||++|||+ ||++.+.+ . ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~hg~-~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSSKG-D----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCCCC-C----HHH-HHHHH
Confidence 1289999999632 11 2468999999999754 356789999999999 99875421 1 234 78999
Q ss_pred HHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEE
Q 007069 492 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKL 571 (619)
Q Consensus 492 ~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 571 (619)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999974 2478999999988765332 2346788888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEeCCCCc
Q 007069 572 TAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDI 604 (619)
Q Consensus 572 ~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~~ 604 (619)
++ +++.|+++|+.+.+|++++++++.|+.|..
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~ 334 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKL 334 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhh
Confidence 98 889999999966899999999998876643
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.98 E-value=6.8e-31 Score=271.44 Aligned_cols=247 Identities=24% Similarity=0.384 Sum_probs=175.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch----hHHH-HHHHhhhhhhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~----~~wd-~f~~~i~~l~~~vP 368 (619)
++|+++||+|..... .+......+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 489999999975211 122333445555554 6899999999999988742 3443 45555555556899
Q ss_pred eEEccCCCccCCCCCCC-CCCCCCCCCccccccceeeeccCCCCCceEEEEEeC------CEEEEEEeCCCCC-------
Q 007069 369 YMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG------MFRFCVADTEHDW------- 434 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 434 (619)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012334444 468999998 7999999998532
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecC
Q 007069 435 --------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 506 (619)
Q Consensus 435 --------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH 506 (619)
..+.+|++||+++|+++ ..+|+||++|+|+ |+..... . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~~---~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEHG---P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCCC---C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3389999999999 7654321 1 1223 88999999999999999999
Q ss_pred cccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC---CCCCcceeeeCcccEEEEEEecCCeEEEEE
Q 007069 507 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYRDYDYGFVKLTAFDHSNLLFEY 583 (619)
Q Consensus 507 ~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~ 583 (619)
+|.+++..+ ...++.||++|+||........ ..++|..++...+||+++++ ++++|+++|
T Consensus 210 ~H~~~~~~~----------------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKD----------------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeec----------------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 999998753 1258899999998876533321 23468888899999999999 678999999
Q ss_pred EECCCC
Q 007069 584 KKSSDG 589 (619)
Q Consensus 584 ~~~~dG 589 (619)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=1.7e-26 Score=236.87 Aligned_cols=241 Identities=17% Similarity=0.156 Sum_probs=162.3
Q ss_pred CceEEEEEeecCCCCCCCCCcc--cccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCch----hHHHHHHHhhh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEY--NDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 361 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~--~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~----~~wd~f~~~i~ 361 (619)
.+++|++++|+|.+..+..... ..| ......++++++. .++||||+++||+++..... .+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 3599999999999854322111 112 1122334444433 24899999999999765432 45667777777
Q ss_pred hhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC------C
Q 007069 362 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW------R 435 (619)
Q Consensus 362 ~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 435 (619)
.+...+|+++++||||........ ...+|. ...+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~--------------~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEE--------------SIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChh--------------HHHHHH---HHhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 666689999999999985321100 001111 01124578999999999999997542 1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCC-chhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 436 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA-EPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 436 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~-~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
...+|++||+++|+++.+.+.+|+||++|+|+ +...... .+..+. ....++.|.++|++++|+++|+||+|.+++..
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~-~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPDE-EDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCCC-CcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE
Confidence 24789999999999875446678999999999 6443211 111111 11237899999999999999999999987642
Q ss_pred ccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEE
Q 007069 515 PIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 584 (619)
Q Consensus 515 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 584 (619)
.+++.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 223 ------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 223 ------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred ------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 14677888887776431 13479999999 6778899987
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.5e-25 Score=219.61 Aligned_cols=259 Identities=21% Similarity=0.317 Sum_probs=165.8
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHH-HHHHhhhhhhc---
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 365 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~--- 365 (619)
++..++|+++||+|.... |+ |......+..|.+ ..++||||.+||++|++|...+.| +|.+.++.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige-~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGE-KLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHH-hccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995532 22 1222233444444 368999999999999999766665 45555555433
Q ss_pred -CCCeEEccCCCccCCCCCCC---CCCCCCCCCccccccceeeeccCCCCCceEEE------EEeCCEEEEEEeCCC---
Q 007069 366 -TVPYMIASGNHERDWPGTGS---FYGNKDSGGECGVLAETMFYVPAENRAKFWYS------TDYGMFRFCVADTEH--- 432 (619)
Q Consensus 366 -~vP~~~v~GNHD~~~~~~~~---~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ys------fd~G~v~fi~Ldt~~--- 432 (619)
+.|||.+.||||+..+-... .|... ..||..|.. ||. +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~~----------d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRKI----------DKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHhh----------ccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 67999999999997532211 11111 234433310 110 001122333333221
Q ss_pred ----CCCC-------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007069 433 ----DWRE-------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 501 (619)
Q Consensus 433 ----~~~~-------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 501 (619)
+|+. ...|+.||+..|++ +.++|+||++|||+ .+.+. |+ .. .. .+++|.|+|+.++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~-HG---~T-~e-L~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGH-HG---PT-KE-LEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhc-cC---Ch-HH-HHHHHHHHHHhcCCcE
Confidence 1211 25788999999998 68899999999998 66543 23 22 23 3899999999999999
Q ss_pred EEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcc----eeeeCcccEEEEEEecCC
Q 007069 502 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWS----LYRDYDYGFVKLTAFDHS 577 (619)
Q Consensus 502 vl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws----~~~~~~~Gy~~l~v~n~~ 577 (619)
+++||+|+.|..-- ..+++-|+++| ||++...-...+|.|. .|.-..-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis~----------------~e~~iqf~tSG-agSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHISS----------------PESGIQFVTSG-AGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhccC----------------CCCCeeEEeeC-CcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 99999999998631 12344555555 4554322222333443 44445559999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEeC
Q 007069 578 NLLFEYKKSSDGKVYDSFRISRD 600 (619)
Q Consensus 578 ~l~~~~~~~~dG~v~D~f~i~k~ 600 (619)
.+++.|+ +..|+++.+....|.
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 799999998776554
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.90 E-value=1.4e-22 Score=204.73 Aligned_cols=229 Identities=15% Similarity=0.206 Sum_probs=151.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998753210000 01112334444432 2489999999999964 4456677777777765 79999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEH 446 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 446 (619)
.++||||.... ...++. ... ......+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-MRAVFP-------------ELP----PAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-HHHhhc-------------ccc----ccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 001110 000 01234578999999999999997532 235789999999
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceeccCC
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKE 525 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~ 525 (619)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999863 345888999998 5543211111 1111 277999999999 99999999999976543
Q ss_pred CccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecC
Q 007069 526 KNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDH 576 (619)
Q Consensus 526 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~ 576 (619)
.+|+.++++|+.|.... ..++...+....+||..+.++++
T Consensus 199 -------~~g~~~~~~gs~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFA----PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred -------ECCEEEEEcCcceeeec----CCCCcccccccCCCCcEEEEecC
Confidence 25788889998877542 22333444466789998887543
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.89 E-value=9.1e-22 Score=202.62 Aligned_cols=207 Identities=21% Similarity=0.266 Sum_probs=135.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~vP~ 369 (619)
|||++++|+|....+.... .+...+...++++++++ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6999999999654321100 11122334455555442 469999999999954432 14555555555544 5899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC----------------
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD---------------- 433 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 433 (619)
++++||||....... .+ . + +.....+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~-~~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSRE-YL-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHh-hh-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 999999998632210 00 0 0 1111234568999999999999999631
Q ss_pred ------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHH
Q 007069 434 ------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 495 (619)
Q Consensus 434 ------------------~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~ 495 (619)
...+.+|++||+++|++... +..++||++|+|+ +.... ..... .. .++.+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~--~~-~~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGL--LW-NHEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Ccccc--cc-CHHHHHHHHH
Confidence 12357999999999998643 2345899999998 65432 11111 11 2678999999
Q ss_pred hc-CCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCC
Q 007069 496 KY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 546 (619)
Q Consensus 496 k~-~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 546 (619)
++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 213 ~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 213 AYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred hCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 95 89999999999987442 25788888886543
No 10
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.87 E-value=2.7e-20 Score=205.69 Aligned_cols=312 Identities=17% Similarity=0.253 Sum_probs=148.7
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHH
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 323 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 323 (619)
..+.+++.++||+|+|+|+||+.... ....|..++|+|+|... ...+||++++|.+... +..+.
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~---~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDG---GGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEec---CCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 46899999999999999999999841 23347889999997533 3459999999997532 11456
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCc-----------------------hhH----HHHHH--HhhhhhhcCCCeEEccC
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQFT--AQIEPIASTVPYMIASG 374 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~-----------------------~~~----wd~f~--~~i~~l~~~vP~~~v~G 374 (619)
++++++. .+|||+||+||.+|+++. ... |..+. ..++.+.+++|++.++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999999852 111 22221 23456677999999999
Q ss_pred CCccCCCCCCCCCCCCC-CCCcc----ccccceee-eccC------CCCCceEEEEEeCC-EEEEEEeCCCCCC------
Q 007069 375 NHERDWPGTGSFYGNKD-SGGEC----GVLAETMF-YVPA------ENRAKFWYSTDYGM-FRFCVADTEHDWR------ 435 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~d-sgge~----g~~~~~~f-~~P~------~~~~~~~Ysfd~G~-v~fi~Ldt~~~~~------ 435 (619)
+||+..+..+.--...+ ..+.. ...+...+ .+|. ......|++|.+|+ +.|++||+.....
T Consensus 203 DHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~ 282 (453)
T PF09423_consen 203 DHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDG 282 (453)
T ss_dssp STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCS
T ss_pred CceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccc
Confidence 99995322100000000 00000 00011111 1232 12356789999999 9999999985321
Q ss_pred ---------------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccc-------cCCCCCCchhhHHHHHHH
Q 007069 436 ---------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFY-------AVDGSFAEPMGRESLQKL 493 (619)
Q Consensus 436 ---------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~-------~~~~~~~~~~~r~~l~~l 493 (619)
.|.+|.+||++.|++ +.++|+|++.-.|+ ....... ..+.--.-+..|++|..+
T Consensus 283 ~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~ 358 (453)
T PF09423_consen 283 PGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLLDF 358 (453)
T ss_dssp SEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHHHH
T ss_pred cccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHHHH
Confidence 268999999999998 56899999988876 3221110 011000011238899999
Q ss_pred HHhcCCe--EEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCC---CC------CCCCCcceee
Q 007069 494 WQKYKVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAE---FT------PLQTTWSLYR 562 (619)
Q Consensus 494 l~k~~Vd--lvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~---~~------~~~~~ws~~~ 562 (619)
|.+.++. ++|+|.+|...-...-.+..-... ......+-+++++=.+.... .. ....++-.|.
T Consensus 359 l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~------~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~ 432 (453)
T PF09423_consen 359 LRESGIRNVVFLSGDVHASAASRIPPDDADPPD------GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFA 432 (453)
T ss_dssp HHHTT---EEEEE-SSSSEEEEEEESSTT---T------TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEE
T ss_pred HHhhCCCCEEEEecCcchheeeecccccccccC------CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEe
Confidence 9988875 889999999766542221100000 00012233444431111000 00 0112344454
Q ss_pred e-CcccEEEEEEecCCeEEEEE
Q 007069 563 D-YDYGFVKLTAFDHSNLLFEY 583 (619)
Q Consensus 563 ~-~~~Gy~~l~v~n~~~l~~~~ 583 (619)
+ ..+||+.|++ +...++.+|
T Consensus 433 ~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 433 DLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp E-B-EEEEEEEE-ETTEEEEEE
T ss_pred ECCCCcEEEEEE-ccceEEEEC
Confidence 4 6899999999 788988875
No 11
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.85 E-value=1.3e-19 Score=187.52 Aligned_cols=239 Identities=15% Similarity=0.183 Sum_probs=142.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----hcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCC
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 367 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~----~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v 367 (619)
..+||+.++|+|....... .... ......++++++ ...+|||||++||++. ++...+|+.+.+.++.+ .+
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~-~~~~--~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~~~l~~l--~~ 86 (275)
T PRK11148 13 ARVRILQITDTHLFADEHE-TLLG--VNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFAEGIAPL--RK 86 (275)
T ss_pred CCEEEEEEcCcccCCCCCC-ceec--cCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHHHHHhhc--CC
Confidence 4599999999997432111 1100 111233444443 2347999999999995 45566777777777665 68
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHH
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKF 443 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~W 443 (619)
|+++++||||..... ..++ +.......++.+..++++||+|||.... ..+.+|++|
T Consensus 87 Pv~~v~GNHD~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 87 PCVWLPGNHDFQPAM-YSAL-------------------QDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred cEEEeCCCCCChHHH-HHHH-------------------hhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 999999999974210 0000 0000111123344556999999997532 235899999
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeeeccccceec
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICT 522 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~p~~~~~~~ 522 (619)
|+++|++. .+.+-+|+++|+|+ .....+... ... . ..++|.+++++| +|+++|+||+|.....
T Consensus 147 L~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~-~~l--~-n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--------- 210 (275)
T PRK11148 147 LERKLADA--PERHTLVLLHHHPL-PAGCAWLDQ-HSL--R-NAHELAEVLAKFPNVKAILCGHIHQELDL--------- 210 (275)
T ss_pred HHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhc-cCC--C-CHHHHHHHHhcCCCceEEEecccChHHhc---------
Confidence 99999986 23332444445565 322222111 111 1 267899999998 8999999999985432
Q ss_pred cCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEE
Q 007069 523 NKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 585 (619)
Q Consensus 523 ~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 585 (619)
..+|+.++++++.+..... ..... .+....+||..+++.+++.+..+.++
T Consensus 211 ---------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 211 ---------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred ---------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 1257777777766654211 11111 11234468888888555566666554
No 12
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.83 E-value=1.7e-19 Score=184.51 Aligned_cols=195 Identities=16% Similarity=0.187 Sum_probs=122.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCC--------chhHHHHHHHhhhhhhc--
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 365 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g--------~~~~wd~f~~~i~~l~~-- 365 (619)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122233333 57999999999995431 24678888887765433
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC----------CC
Q 007069 366 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WR 435 (619)
Q Consensus 366 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 435 (619)
..|++.++||||....... +. .. ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998421110 00 00 011111111111111222333459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeec
Q 007069 436 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCP 515 (619)
Q Consensus 436 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p 515 (619)
...+|++||+++|++. .+.+++||++|+|+ +..... . ....+ .+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~----~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP----S---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC----C---cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34568999999998 543211 1 11113 399999999999999999999999666
Q ss_pred c
Q 007069 516 I 516 (619)
Q Consensus 516 ~ 516 (619)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
No 13
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.81 E-value=2.7e-19 Score=188.41 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=165.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccchHHH
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 323 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 323 (619)
..+.+++.++||+|++.|+||+... ..-|...+|+|+|.++. .++|+.+||..+.. |+.+-..+
T Consensus 97 ~dhtv~v~~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~--~i~~~~fa~ascQ~---------~~~gy~~a 160 (522)
T COG3540 97 LDHTVHVDLRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGR--AIRFVWFADASCQG---------WEIGYMTA 160 (522)
T ss_pred cCceEEEeccCCCCCceEEEEEeeC-----CccccccccccCCCCCC--cchhhhhhhccccc---------cccchhHH
Confidence 4688999999999999999999875 23478999999998765 47888888876543 33444567
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCchh-----------------------------HHHHHH--HhhhhhhcCCCeEEc
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGYIS-----------------------------QWDQFT--AQIEPIASTVPYMIA 372 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~~~-----------------------------~wd~f~--~~i~~l~~~vP~~~v 372 (619)
.+.|.+ .+|||+||.||.+|+.|-.. +|..++ +.++...+..|+++.
T Consensus 161 Y~~ma~--~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~ 238 (522)
T COG3540 161 YKTMAK--EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQ 238 (522)
T ss_pred HHHHHh--cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEE
Confidence 777776 67999999999999976321 121111 123445568999999
Q ss_pred cCCCccCCCCCCCCCCCCCC-CCccc------cccceee-eccCC-----CCCceEEEEEeCC-EEEEEEeCCCCCC---
Q 007069 373 SGNHERDWPGTGSFYGNKDS-GGECG------VLAETMF-YVPAE-----NRAKFWYSTDYGM-FRFCVADTEHDWR--- 435 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~ds-gge~g------~~~~~~f-~~P~~-----~~~~~~Ysfd~G~-v~fi~Ldt~~~~~--- 435 (619)
+..||...+-...- ...|+ -.|.. .+++.++ .||-. .....|-+|.||+ ..|.+||+..+..
T Consensus 239 WDDHEv~NN~~~~~-~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp 317 (522)
T COG3540 239 WDDHEVANNWSNSI-DENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQP 317 (522)
T ss_pred eccccccccccccc-cccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccc
Confidence 99999864211000 00011 11110 0111111 35521 1357899999999 6799999986431
Q ss_pred -------------------CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCC-Cc-------cccCCCCCCchhhHH
Q 007069 436 -------------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSS-GI-------FYAVDGSFAEPMGRE 488 (619)
Q Consensus 436 -------------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss-~~-------~~~~~~~~~~~~~r~ 488 (619)
.|.+|.+||++.|.+ +++.|+|+..-.||.--. +. -...++.-.-+.+|+
T Consensus 318 ~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~Re 394 (522)
T COG3540 318 CGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRE 394 (522)
T ss_pred cCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHH
Confidence 268999999999998 789999998888772100 00 000111112345699
Q ss_pred HHHHHHHhcCCe--EEEecCccccee
Q 007069 489 SLQKLWQKYKVD--IAIYGHVHNYER 512 (619)
Q Consensus 489 ~l~~ll~k~~Vd--lvl~GH~H~YeR 512 (619)
.|...+.+.++. ++|+|.+|...-
T Consensus 395 rLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 395 RLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred HHHHHHHhcCCCCcEEEechhHHHHH
Confidence 999999998876 899999997543
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.80 E-value=6.8e-19 Score=175.40 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=112.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh-cCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~-~~vP~~ 370 (619)
|||++++|+|..... ........++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999975421 0111123445555543 579999999999965544678999998888876 679999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCC-CCCchhhHHHHHHHHHhc-CCeEEEecCcccceeee
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~ 514 (619)
. +..++|+++|+|+ +....+..... ......+++.|+++++++ +|+++|+||+|.+.+..
T Consensus 104 ~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 104 H---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 4 2345999999998 65543211110 000112366799999998 79999999999998875
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.70 E-value=2.3e-16 Score=164.80 Aligned_cols=181 Identities=14% Similarity=0.152 Sum_probs=116.5
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCchh--------HHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSG 393 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~--------~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsg 393 (619)
++++.+.+...+|||||++||+++...... .+..+++.++.....+|+++++||||....+.... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 455555554468999999999996653221 24556666777778999999999999864321110 0000
Q ss_pred Cccccccceeee--ccCC----CCCceEEEEE-eCCEEEEEEeCCCCCC-----------CCHHHHHHHHHHHhhccCCC
Q 007069 394 GECGVLAETMFY--VPAE----NRAKFWYSTD-YGMFRFCVADTEHDWR-----------EGTEQYKFIEHCLASVDRQK 455 (619)
Q Consensus 394 ge~g~~~~~~f~--~P~~----~~~~~~Ysfd-~G~v~fi~Ldt~~~~~-----------~~~~Q~~WL~~~L~~~~r~~ 455 (619)
..........|. +|.+ -....||+++ .++++||+|||..... ...+|++||+++|+++.+.+
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 000000011111 2211 1245688888 8999999999975321 24789999999999875333
Q ss_pred CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccceeee
Q 007069 456 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYERTC 514 (619)
Q Consensus 456 ~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--Vdlvl~GH~H~YeRt~ 514 (619)
..++|++|+|+ +..... . . ...++.|.+++++|+ |.++|+||+|..+...
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 34788999998 443211 0 0 122789999999997 7889999999977653
No 16
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.66 E-value=2.6e-15 Score=147.85 Aligned_cols=166 Identities=14% Similarity=0.197 Sum_probs=102.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchh-HHHHHHHhhhhhh-cCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 370 (619)
.+||++++|+|....................+.++++. .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100001111223445555554 68999999999997655432 2344444445443 379999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 450 (619)
+++||||.. .....+|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCeEEEEeeccccCCCCc-cc------cC--CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 451 VD--RQKQPWLIFLAHRVLGYSSGI-FY------AV--DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 451 ~~--r~~~pw~Iv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
.. +....+.+++.|+|+ ..... +. +. +.........+.+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 223456899999997 43321 11 00 1000011113344445566799999999999987654
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.65 E-value=1.2e-16 Score=148.89 Aligned_cols=198 Identities=19% Similarity=0.192 Sum_probs=100.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHH-HhhhhhhcCCCeEEc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 372 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~-~~i~~l~~~vP~~~v 372 (619)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 699999999986421 000 1122223322 378999999999997766554444322 223344568999999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccC-CCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
+||||+......... .............. ....+...........+..............+..|+...+...
T Consensus 72 ~GNHD~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (200)
T PF00149_consen 72 LGNHDYYSGNSFYGF-------YDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLL 144 (200)
T ss_dssp E-TTSSHHHHHHHHH-------HHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHH
T ss_pred ccccccceecccccc-------ccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccccc
Confidence 999998531100000 00000000000000 0000000112222222222222211112223333333322222
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 510 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Y 510 (619)
.+...+++||++|+|+ ++........ ......++.+..++++++|+++|+||+|.|
T Consensus 145 ~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 145 EAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2245678999999999 6554321100 001223789999999999999999999987
No 18
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.65 E-value=1.8e-15 Score=154.63 Aligned_cols=162 Identities=19% Similarity=0.183 Sum_probs=103.3
Q ss_pred CCCCEEEEcCcccccCC--chhHHH----HHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeee
Q 007069 332 KNIDIVFHIGDICYANG--YISQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFY 405 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g--~~~~wd----~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 405 (619)
.+||+|+++||+++.+. ...+|. +|.+.+.++...+|++.++||||+.+.+... . ..-..|...|.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~Fg 115 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYFG 115 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHhC
Confidence 57999999999996432 124454 3444444433358999999999985422100 0 00011222331
Q ss_pred ccCCCCCceEEEEEeCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCC
Q 007069 406 VPAENRAKFWYSTDYGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 480 (619)
Q Consensus 406 ~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~ 480 (619)
...|+|++|+++||+|||.... ....+|.+||++.|+... ...| +|++.|+|+ |....- .+|.
T Consensus 116 -------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~~--~cg~ 183 (257)
T cd08163 116 -------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPNT--SCGP 183 (257)
T ss_pred -------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCCC--CCCC
Confidence 2347899999999999997421 234679999999998642 2344 899999999 654321 1111
Q ss_pred CC--------------c-hhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 481 FA--------------E-PMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 481 ~~--------------~-~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
.. + .+..+.-..||++.++.+||+||+|.|=..
T Consensus 184 ~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 184 LRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 00 0 112355568888889999999999998654
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.62 E-value=4.9e-15 Score=149.53 Aligned_cols=202 Identities=19% Similarity=0.248 Sum_probs=119.2
Q ss_pred EEEEeecCCCCC--CCCCcccccccchHHHHHHHHH---h-cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 296 VVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 296 f~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~i~~---~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
+.+++|+|.... .+.+. +.....+.++++.+ . .++||+|+++||+++. +...+....++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~---~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDV---FGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCcc---cCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 368899997742 11112 22222334444433 2 2489999999999943 3333333444444433 3578
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCC----CC----------C
Q 007069 370 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH----DW----------R 435 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~----~~----------~ 435 (619)
++++||||+.......+.. . .. ...+.+. .-.++.++++.|++++... .+ .
T Consensus 75 ~~V~GNHD~~~~~~~~~~~-------~-l~-~~~~~~~------~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~ 139 (232)
T cd07393 75 VLLKGNHDYWWGSASKLRK-------A-LE-ESRLALL------FNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEE 139 (232)
T ss_pred EEEeCCccccCCCHHHHHH-------H-HH-hcCeEEe------ccCcEEECCEEEEEEEeeCCCCCccccccccccchh
Confidence 9999999973211000000 0 00 0000000 0134567889999876311 11 0
Q ss_pred ---CCHHHHHHHHHHHhhccCCC-CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 436 ---EGTEQYKFIEHCLASVDRQK-QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 436 ---~~~~Q~~WL~~~L~~~~r~~-~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
...+|++||++.|+++.... ..++|++.|+|+ +.... ..+.+..++++++|+++|+||+|.++
T Consensus 140 ~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~~ 206 (232)
T cd07393 140 DEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGVG 206 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCCc
Confidence 02568999999999864222 246999999998 54421 13467889999999999999999999
Q ss_pred eeeccccceeccCCCccccCCCCceEEEEeCCC
Q 007069 512 RTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGG 544 (619)
Q Consensus 512 Rt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 544 (619)
+..|+... .+|+.|+++.++
T Consensus 207 ~~~~~~~~-------------~~gi~~~~~~~~ 226 (232)
T cd07393 207 RDRAINGE-------------RGGIRYQLVSAD 226 (232)
T ss_pred ccccccce-------------ECCEEEEEEcch
Confidence 98876432 256777776653
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.59 E-value=1.5e-13 Score=148.37 Aligned_cols=99 Identities=20% Similarity=0.182 Sum_probs=72.4
Q ss_pred CceEEEEE-eCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCC-CCch
Q 007069 412 AKFWYSTD-YGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS-FAEP 484 (619)
Q Consensus 412 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~-~~~~ 484 (619)
+..||+|+ .+++|||+|||.... ....+|++||+++|++. +.+++||++|||+ ++........-. -...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 899999999997531 23589999999999973 4467999999998 665321110000 0001
Q ss_pred hhHHHHHHHHHhc-CCeEEEecCcccceeee
Q 007069 485 MGRESLQKLWQKY-KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 485 ~~r~~l~~ll~k~-~Vdlvl~GH~H~YeRt~ 514 (619)
...++|.++|++| +|.++|+||.|....+.
T Consensus 366 ~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~ 396 (496)
T TIGR03767 366 HLGTELVSLLLEHPNVLAWVNGHTHSNKITA 396 (496)
T ss_pred cCHHHHHHHHhcCCCceEEEECCcCCCcccc
Confidence 1257899999998 89999999999876553
No 21
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.53 E-value=1.6e-14 Score=115.00 Aligned_cols=62 Identities=37% Similarity=0.777 Sum_probs=42.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007069 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSF 595 (619)
Q Consensus 534 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f 595 (619)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.51 E-value=4.6e-13 Score=129.62 Aligned_cols=168 Identities=15% Similarity=0.185 Sum_probs=101.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCC
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 375 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 375 (619)
++++||+|.+.. .... ..++ ..++|+|+++||+++.. .......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999996521 1111 2222 26899999999999543 33333333 33333 26899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHHh
Q 007069 376 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------WREGTEQYKFIEHCLA 449 (619)
Q Consensus 376 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~~~~Q~~WL~~~L~ 449 (619)
||...... .. . . ..+.+ .+ ..+.+++++|+++++... .....+|++|+ +.|+
T Consensus 62 HD~~~~~~--~~---~---~------~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEILG--LL---T---S------AGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHHHH--hh---h---c------CcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 99642100 00 0 0 00111 11 235678899999987432 12346889998 4444
Q ss_pred hccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 450 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 450 ~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
. .+.+.+|++.|+|+ +.... ..... ....+.+.+..++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~~~--d~~~~-~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGTAV--DRVSG-GFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCCcc--cccCC-CCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 23345899999998 65311 11000 011246789999999999999999999854
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.44 E-value=2.9e-12 Score=129.82 Aligned_cols=185 Identities=20% Similarity=0.237 Sum_probs=103.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
||++++|+|.... .+ .+ ...++++++.. .++|+|+++||++... .+..++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~---~~--~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF---DT--EEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC---CH--HHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 11 12233333321 5799999999999532 2223455544442 46899999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC-------------------
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------------------- 433 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 433 (619)
+||||+........+ ...+. + ....+.++.+..++++|++++.-.+
T Consensus 68 ~GNHD~~~~~~~~~~-------------~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLTYEEI-------------ESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCCHHHH-------------Hhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 999997421110000 00000 0 0001122223335677777762111
Q ss_pred -------CC-----CCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCC-CC---CchhhHHHHHHHHHhc
Q 007069 434 -------WR-----EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SF---AEPMGRESLQKLWQKY 497 (619)
Q Consensus 434 -------~~-----~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~ll~k~ 497 (619)
.. ...+|++||++.|++.. ..+ +|++.|+|+ .......+.+. .+ ....+.+.|+++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 10 12678999999998752 334 888889987 33110000000 00 0112357899999999
Q ss_pred CCeEEEecCcccce
Q 007069 498 KVDIAIYGHVHNYE 511 (619)
Q Consensus 498 ~Vdlvl~GH~H~Ye 511 (619)
+|+++|+||.|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999864
No 24
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.42 E-value=1.4e-12 Score=130.12 Aligned_cols=198 Identities=17% Similarity=0.170 Sum_probs=110.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 01123333332 257999999999996544322 345556666666799999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
++||||+......... + ......+.+ ..+.+..++.++..+.++--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~----L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITV----LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEE----eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 000001111 01223445556544443321111 12335666777664
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccce--eccC---CC
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI--CTNK---EK 526 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~--~~~~---~~ 526 (619)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|..... |... ..
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~ 187 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDY 187 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEeccccccccchhhcCcccc
Confidence 34456899999985 1 111 156799999999999999887765432 1111 11
Q ss_pred ccccCCCCceEEEEeCCCCC
Q 007069 527 NYYKGTLNGTIHVVAGGGGA 546 (619)
Q Consensus 527 ~~y~~~~~g~vyiv~G~gG~ 546 (619)
..|. ..+..+||..|.|..
T Consensus 188 G~~~-~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 188 GLYR-KGGSQLYVSRGLGTW 206 (223)
T ss_pred eEEE-ECCEEEEEcCCccCC
Confidence 1121 234567777776543
No 25
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.42 E-value=2.1e-12 Score=120.19 Aligned_cols=125 Identities=18% Similarity=0.289 Sum_probs=84.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcC-CCeEEc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 372 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~-vP~~~v 372 (619)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999875421110 0011112223322 2579999999999964 4456777777777766543 699999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 452 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 452 (619)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 453 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 453 r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
|+++|+|+ +..... .... . ..++.+.+++++++++++++||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~---~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L---LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C---CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899998 544221 1111 1 13678999999999999999999997644
No 26
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.42 E-value=4.7e-12 Score=131.06 Aligned_cols=184 Identities=19% Similarity=0.265 Sum_probs=116.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+||+.++|.|..... ......+.+++++. .+||+|+++||+++. |...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999987310 01223444444443 578999999999965 777777777777775555789999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEe-CCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHDW----REGTEQYKFIEH 446 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 446 (619)
+|||||....+...+ ...+.. ....+-.... ++++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEAF--------------SDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHHh--------------hhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 999999864322110 000100 0011111122 67899999998653 346899999999
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccc
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNY 510 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--Vdlvl~GH~H~Y 510 (619)
.|++........+|+++|+|+ .......... .......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~----~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRV----ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCcccee----eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221124677777776 4332221111 1111456777888887 999999999986
No 27
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.40 E-value=1.2e-11 Score=132.35 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=66.8
Q ss_pred CceEEEEE-eCCE--EEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCc----
Q 007069 412 AKFWYSTD-YGMF--RFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI---- 473 (619)
Q Consensus 412 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~---- 473 (619)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.|++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5845 99999987521 135899999999999874 36688898899887 54221
Q ss_pred -ccc-C-C--CCCCchhhHHHHHHHHHhc-CCeEEEecCcccc
Q 007069 474 -FYA-V-D--GSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNY 510 (619)
Q Consensus 474 -~~~-~-~--~~~~~~~~r~~l~~ll~k~-~Vdlvl~GH~H~Y 510 (619)
|.. . . ....+...-.+|..+|++| +|.++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 110 0 0 0011111124899999998 7999999999964
No 28
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.35 E-value=4.5e-11 Score=119.45 Aligned_cols=174 Identities=14% Similarity=0.189 Sum_probs=103.1
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......++..+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999954 23344444432 57999999999996542344444555554433 57999
Q ss_pred EccCCCccCCCCC-CCCCCCCCCCCccccccceeeeccC-CCCCceEEEEEe-CCEEEEEEeCCCCC--CCCHHHH----
Q 007069 371 IASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDY-GMFRFCVADTEHDW--REGTEQY---- 441 (619)
Q Consensus 371 ~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~~~~Q~---- 441 (619)
+++||||..-... ...|.. .-..|. -.....+ ..+ |+++|+.++..... ...++|.
T Consensus 67 ~V~GNhD~~v~~~l~~~~~~-------------~~~~p~~~~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 67 YVPGPQDAPLWEYLREAYNA-------------ELVHPEIRNVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred EEcCCCChHHHHHHHHHhcc-------------cccCccceecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 9999999630000 000000 000010 0011112 344 66999999866432 2234442
Q ss_pred HHHHH-HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007069 442 KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 508 (619)
Q Consensus 442 ~WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H 508 (619)
.||.+ .|+...+...+..|++.|+|+ |..+. ...+.+.+..++++++..++++||.|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 222221123345899999999 76631 12346799999999999999999999
No 29
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.31 E-value=1.2e-11 Score=117.96 Aligned_cols=150 Identities=17% Similarity=0.189 Sum_probs=85.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCC
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 375 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 375 (619)
|++++|+|.+.... ...+.+.+ ...++|+|+++||+++... ..++.. ..+......|++.++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~-~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFP-IAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccC-CCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 00111111 1268999999999996432 222222 22233457899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007069 376 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 455 (619)
Q Consensus 376 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~ 455 (619)
||+.. +|. ....||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~-----G~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII-----GTTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE-----eeecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 00123332211 1245555555544
Q ss_pred CCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 456 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 456 ~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
+.+|+++|+|+ +.................++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23899999998 6543211111111111225668888889999999999999864
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.30 E-value=4.2e-11 Score=123.73 Aligned_cols=170 Identities=16% Similarity=0.185 Sum_probs=95.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
.++|+++++|+|.+... + ...++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 1 1223333322 26899999999999622 223445666777777667899
Q ss_pred EEccCCCccCCCCCC-CCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHH
Q 007069 370 MIASGNHERDWPGTG-SFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGM--FRFCVADTEHDWREGTEQYKFIEH 446 (619)
Q Consensus 370 ~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q~~WL~~ 446 (619)
++++||||+...... ..+. ..-.+.| +.+ ..+....+..++ +.++.++... . +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~--~~l~~~g------i~l----L~n~~~~i~~~~~~i~i~G~~d~~--~-~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIG--ETLKSAG------ITV----LFNQATVIATPNRQFELVGTGDLW--A-GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHH--HHHHhcC------cEE----eeCCeEEEeeCCcEEEEEEecchh--c-cCCC---hhH
Confidence 999999997421100 0000 0000001 111 112334455443 5566665321 1 1111 111
Q ss_pred HHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeecccc
Q 007069 447 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 518 (619)
Q Consensus 447 ~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~ 518 (619)
.++ ++. ..|++.|.|- + . +.+.+.++||+|+||+|.-|-..|..+
T Consensus 178 ~~~----~~~-~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE----ANL-PRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC----CCC-CeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 233 4889999994 1 0 122467899999999999998877643
No 31
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.29 E-value=2.3e-11 Score=121.07 Aligned_cols=198 Identities=12% Similarity=0.097 Sum_probs=108.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHhhhhhh-cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 370 (619)
||++++|+|.+.......-.........+++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999875421110000011123455555543 258999999999996543 2334556666666654 479999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccceeeec--cCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV--PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCL 448 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L 448 (619)
+++||||....... +... ......... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSPL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998642211 1000 000000000 0000112223345556888888764321 1123444555555
Q ss_pred hhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 449 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 449 ~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
.+. .+....|++.|.|+ ...... .. .. .......+...++|++++||.|..+..
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCeee
Confidence 543 34556999999997 333211 00 00 122344556788999999999997653
No 32
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.18 E-value=1.9e-09 Score=110.43 Aligned_cols=88 Identities=14% Similarity=0.284 Sum_probs=58.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccc--------cchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQ--------YASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
+..||++.++|||.+...++.-.+.++ ....+-++++++. ++||||+++||+++.......-..+++.+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997642221111111 1123456677764 8999999999999764322111235556666
Q ss_pred -hhcCCCeEEccCCCccC
Q 007069 363 -IASTVPYMIASGNHERD 379 (619)
Q Consensus 363 -l~~~vP~~~v~GNHD~~ 379 (619)
+..++||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 45699999999999965
No 33
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.12 E-value=9.7e-10 Score=102.97 Aligned_cols=153 Identities=18% Similarity=0.310 Sum_probs=90.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+||+++||+|... ..++++++...++|+|+++||++.. .++++.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 5899999999752 2244555554679999999999852 4555555554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007069 374 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 453 (619)
Q Consensus 374 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r 453 (619)
||||... + ..... ... +.+.+. .
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~-----------------------------~~~~~~---~ 77 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY-----------------------------LLDALR---L 77 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS-----------------------------SHSEEE---E
T ss_pred CCccccc------c-------------hhhhh------ccc-----------------------------ccccee---e
Confidence 9999531 0 00000 000 000000 0
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCC
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 533 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 533 (619)
.-..+.|++.|.+. +... . ..+.+..++...+++++++||.|..+... .
T Consensus 78 ~~~~~~i~~~H~~~-~~~~-----------~-~~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------~ 126 (156)
T PF12850_consen 78 TIDGFKILLSHGHP-YDVQ-----------W-DPAELREILSRENVDLVLHGHTHRPQVFK------------------I 126 (156)
T ss_dssp EETTEEEEEESSTS-SSST-----------T-THHHHHHHHHHTTSSEEEESSSSSEEEEE------------------E
T ss_pred eecCCeEEEECCCC-cccc-----------c-ChhhhhhhhcccCCCEEEcCCcccceEEE------------------E
Confidence 11245788888776 4321 1 14467788889999999999999977653 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEE
Q 007069 534 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTA 573 (619)
Q Consensus 534 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 573 (619)
+++.++..|+-+... . ...-+|+.+++
T Consensus 127 ~~~~~~~~Gs~~~~~--~-----------~~~~~~~i~~~ 153 (156)
T PF12850_consen 127 GGIHVINPGSIGGPR--H-----------GDQSGYAILDI 153 (156)
T ss_dssp TTEEEEEE-GSSS-S--S-----------SSSEEEEEEEE
T ss_pred CCEEEEECCcCCCCC--C-----------CCCCEEEEEEE
Confidence 467778888765431 1 11457888887
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.07 E-value=1.8e-09 Score=96.59 Aligned_cols=96 Identities=29% Similarity=0.423 Sum_probs=69.5
Q ss_pred cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCC
Q 007069 331 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN 410 (619)
Q Consensus 331 ~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 410 (619)
..++|+|+++||+++.... ..+..+...........|++.++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 3789999999999975543 333333323333456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHH
Q 007069 411 RAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESL 490 (619)
Q Consensus 411 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 490 (619)
|++.|.|+ +........ . ... .++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~~-~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELSP-D--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhcc-c--chh-hHHHH
Confidence 88999998 544322111 1 011 26788
Q ss_pred HHHHHhcCCeEEEecCcccceeee
Q 007069 491 QKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 491 ~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
..++.+++++++|+||.|.+.+..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
No 35
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.03 E-value=2.1e-09 Score=111.34 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=56.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
...++++.++|+|.... .......+.++.+ ..||+|+.+||+++. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34689999999998742 1122334444444 567999999999964 22344567777788888899999
Q ss_pred EccCCCccCC
Q 007069 371 IASGNHERDW 380 (619)
Q Consensus 371 ~v~GNHD~~~ 380 (619)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
No 36
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.95 E-value=2.2e-08 Score=94.29 Aligned_cols=59 Identities=15% Similarity=0.418 Sum_probs=42.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
|++++||+|... ..++++++...++|.|+++||+++.... .. +....|++.+.|
T Consensus 1 ~i~~isD~H~~~---------------~~~~~~~~~~~~~d~ii~~GD~~~~~~~-~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGSL---------------ELLEKALELFGDVDLIIHAGDVLYPGPL-NE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCCH---------------HHHHHHHHHhcCCCEEEECCcccccccc-ch----------hhcCCcEEEEeC
Confidence 589999999541 3455666655559999999999954322 11 234679999999
Q ss_pred CCccC
Q 007069 375 NHERD 379 (619)
Q Consensus 375 NHD~~ 379 (619)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99963
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.87 E-value=2.2e-08 Score=92.35 Aligned_cols=117 Identities=20% Similarity=0.346 Sum_probs=76.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
||+++||+|.... .+ ...++|+|+++||+++. +...+++.+.+.++.+. ..+++.++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999996521 11 22679999999999953 44444555555555442 223578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007069 375 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 454 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~ 454 (619)
|||... . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--- 66 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--- 66 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C---
Confidence 999620 0 1
Q ss_pred CCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 455 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 455 ~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
+ .+.|++.|.|+ +..... ... ....+.+.+..++++++++++++||+|...
T Consensus 67 ~-~~~ilv~H~~p-~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 E-DTDILVTHGPP-YGHLDL-VSS---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred C-CCEEEEECCCC-CcCccc-ccc---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 1 23688899998 765321 100 011224577888899999999999999964
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.86 E-value=6.5e-08 Score=97.24 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+|.... . ... +.++. .+||+|+++||++... .+..+.++.+ ..|++.++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1233333332 47999999
Q ss_pred CCCccCC
Q 007069 374 GNHERDW 380 (619)
Q Consensus 374 GNHD~~~ 380 (619)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
No 39
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.81 E-value=1.6e-08 Score=98.60 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=34.7
Q ss_pred CCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh---cCCCeEEccCCCccC
Q 007069 332 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 379 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~---~~vP~~~v~GNHD~~ 379 (619)
.+||+|+++||+++.+.. ..+|.+.++.+.++. ..+|++.++||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 579999999999976543 234554444444443 368999999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.77 E-value=1e-06 Score=85.39 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=97.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccC
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 374 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 374 (619)
+++++||+|...... .....+.+++++ .++|.|+|+||+++ . +..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 478999999654211 112345555554 57999999999984 1 222333332 247899999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007069 375 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 454 (619)
Q Consensus 375 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~ 454 (619)
|||..+ .+|.. ..++.++
T Consensus 61 N~D~~~------------------------~lp~~------~~~~~~g-------------------------------- 78 (178)
T cd07394 61 DFDENL------------------------NYPET------KVITVGQ-------------------------------- 78 (178)
T ss_pred CCCccc------------------------cCCCc------EEEEECC--------------------------------
Confidence 999631 11210 1223222
Q ss_pred CCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCC
Q 007069 455 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLN 534 (619)
Q Consensus 455 ~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~ 534 (619)
++|.+.|--. +... . . .+.+..++++.++|++++||+|...... .+
T Consensus 79 ---~~i~l~HG~~-~~~~------~---~---~~~~~~~~~~~~~dvii~GHTH~p~~~~------------------~~ 124 (178)
T cd07394 79 ---FKIGLIHGHQ-VVPW------G---D---PDSLAALQRQLDVDILISGHTHKFEAFE------------------HE 124 (178)
T ss_pred ---EEEEEEECCc-CCCC------C---C---HHHHHHHHHhcCCCEEEECCCCcceEEE------------------EC
Confidence 3556666422 2110 0 0 3355566677899999999999754332 14
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCcceeeeCcccEEEEEEecCCeEEEEEEECCCCc
Q 007069 535 GTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 590 (619)
Q Consensus 535 g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 590 (619)
+..++..|+.|....+. . ......|+++++ +...+.++++.=.+++
T Consensus 125 g~~viNPGSv~~~~~~~-----~----~~~~~syail~~-~~~~~~~~~~~l~~~~ 170 (178)
T cd07394 125 GKFFINPGSATGAFSPL-----D----PNVIPSFVLMDI-QGSKVVTYVYQLIDGE 170 (178)
T ss_pred CEEEEECCCCCCCCCCC-----C----CCCCCeEEEEEe-cCCeEEEEEEEEECCc
Confidence 67778888876432110 0 011236788887 5667777777534443
No 41
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.76 E-value=2.8e-07 Score=87.26 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 47999999995421 12334455554348999999999981 1233333332 45899999
Q ss_pred CCCcc
Q 007069 374 GNHER 378 (619)
Q Consensus 374 GNHD~ 378 (619)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.75 E-value=3.7e-08 Score=99.99 Aligned_cols=182 Identities=18% Similarity=0.235 Sum_probs=96.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-hcCCCCEEEEcCcccccC-Cc---hhHHHHHHHhhhhhhcC-C
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-DLKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~~~~pDfVl~~GDi~y~~-g~---~~~wd~f~~~i~~l~~~-v 367 (619)
.|+++++|+|.+... +.....+.+.++ ...++|+|+++||+++.- |. ........+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 378999999986421 111222323222 235799999999999531 11 12223455556666544 8
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHC 447 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 447 (619)
|++.+.||||..... .+. .++|. .. +|. ...++.++.++++.-.... ......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~---~~--l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM---TL--LPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC---EE--eCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 999999999974211 110 01111 01 111 1346677777766643322 1233556666555
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCcc------------cc-CCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIF------------YA-VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~------------~~-~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
+.. ||...+.|.++ +..... .. ....+... ..+.+.+++++++++++++||+|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 23333344433 211000 00 00011111 145788899999999999999998654
No 43
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.69 E-value=1.5e-06 Score=85.37 Aligned_cols=176 Identities=19% Similarity=0.294 Sum_probs=100.4
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHh--hhhhh-cCCC
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQ--IEPIA-STVP 368 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~--i~~l~-~~vP 368 (619)
.+|++++.|.|.... +...+..+.++ .++|+++.+||++|.. +... .-.+. ++.+. ..+|
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~---~~~~~~~~e~l~~~~~~ 66 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKE---VAEELNKLEALKELGIP 66 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchH---HHHhhhHHHHHHhcCCe
Confidence 479999999986531 12223333332 4799999999999432 1111 11111 34444 4899
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCC----CCC-HHHH
Q 007069 369 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDW----REG-TEQY 441 (619)
Q Consensus 369 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~----~~~-~~Q~ 441 (619)
+++++||-|-..- .+... .+ ++. + .+ -+.+.|++.|+.+--. ..| .-. .+-+
T Consensus 67 v~avpGNcD~~~v--~~~l~--~~----~~~------v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 67 VLAVPGNCDPPEV--IDVLK--NA----GVN------V-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred EEEEcCCCChHHH--HHHHH--hc----ccc------c-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 9999999874210 00000 00 000 0 01 3466777777774221 111 112 3334
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
.-++.-+.+.+ .+-.|++.|.|+ |..... ...+ ....|.+.+..++++.++-+.++||.|-+.-
T Consensus 126 s~l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 126 SKLKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 45555555542 222399999999 876432 1111 1355688999999999999999999998543
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.69 E-value=1.9e-07 Score=88.50 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=38.7
Q ss_pred HHHHHHHhcCCCCEEEEcCcccccCC--chhHHHHHHHhhhhhhc---CCCeEEccCCCccC
Q 007069 323 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 379 (619)
Q Consensus 323 ~~~~i~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l~~---~vP~~~v~GNHD~~ 379 (619)
.++++++. .+||+|+++||++.... ...+|.++...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996532 23456565555544432 58999999999974
No 45
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.64 E-value=1.4e-07 Score=92.28 Aligned_cols=181 Identities=19% Similarity=0.264 Sum_probs=89.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHH-------------------
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 354 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd------------------- 354 (619)
=++++++|.+... ..++.+..++.+ .+||+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 4789999986431 234445555555 48999999999997666666666
Q ss_pred -------HHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCC-CCCceEEEEEeCCEEEE
Q 007069 355 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE-NRAKFWYSTDYGMFRFC 426 (619)
Q Consensus 355 -------~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~~Ysfd~G~v~fi 426 (619)
.|++.+..+ .+|.+++|||||-.- . -|+. .++....-.|.- .--.. +.+--|..-|+
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~--~-~~lr---------~a~~~e~v~p~~~~vH~s-f~~~~g~y~v~ 137 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE--R-FFLR---------EAYNAEIVTPHIHNVHES-FFFWKGEYLVA 137 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH--H-HHHH---------HHHHCCCC-TTEEE-CTC-EEEETTTEEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH--H-HHHH---------HHhccceeccceeeeeee-ecccCCcEEEE
Confidence 666666543 799999999999521 0 0000 001100001100 00001 22333456677
Q ss_pred EEeCCCC---CCC------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc
Q 007069 427 VADTEHD---WRE------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY 497 (619)
Q Consensus 427 ~Ldt~~~---~~~------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~ 497 (619)
.+-.+-. ... -....+|..+.|.++ +..-+|++.|.|+-+.. + ....|.+.+..++++|
T Consensus 138 G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~k-------g--~~h~GS~~V~dlIk~~ 205 (255)
T PF14582_consen 138 GMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHK-------G--LIHVGSAAVRDLIKTY 205 (255)
T ss_dssp EE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCT-------C--TBTTSBHHHHHHHHHH
T ss_pred ecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCC-------C--cccccHHHHHHHHHhc
Confidence 6654311 000 012345555666664 23348888999971111 1 0123467899999999
Q ss_pred CCeEEEecCcccceeee
Q 007069 498 KVDIAIYGHVHNYERTC 514 (619)
Q Consensus 498 ~Vdlvl~GH~H~YeRt~ 514 (619)
+.+++|+||.|.-.-.+
T Consensus 206 ~P~ivl~Ghihe~~~~e 222 (255)
T PF14582_consen 206 NPDIVLCGHIHESHGKE 222 (255)
T ss_dssp --SEEEE-SSS-EE--E
T ss_pred CCcEEEecccccchhhH
Confidence 99999999999754333
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.64 E-value=1.5e-07 Score=86.20 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=34.0
Q ss_pred EEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 459 LIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 459 ~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
.|++.|+|+ +.... ..+ . ...+.+.+..++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 577888887 54321 111 1 11236788889999999999999999865543
No 47
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.59 E-value=4.3e-07 Score=99.91 Aligned_cols=176 Identities=18% Similarity=0.197 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCc----h---hHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGG 394 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~----~---~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgg 394 (619)
++++.|.+...++|+|+++||++-.+.- + .......+.+......+|+|+++||||....+.-.. ...+ .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~--~~~~-~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP--GSVP-K 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC--CCCc-c
Confidence 3455555544569999999999944311 1 111233445556667999999999999864332110 0000 0
Q ss_pred cccc--cc------ceeeeccCCC----CCceEEE-EEeCCEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhc
Q 007069 395 ECGV--LA------ETMFYVPAEN----RAKFWYS-TDYGMFRFCVADTEHDWR----------EGTEQYKFIEHCLASV 451 (619)
Q Consensus 395 e~g~--~~------~~~f~~P~~~----~~~~~Ys-fd~G~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~ 451 (619)
..+. .| +..| +|.+. ..+.+|. .-+++.++|+||+..-+. ...+|++|+..+|.++
T Consensus 276 ~~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~a 354 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEA 354 (577)
T ss_pred hhhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHH
Confidence 0000 00 1111 33221 2344554 355889999999975321 2467899999999987
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc--CCeEEEecCccccee
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY--KVDIAIYGHVHNYER 512 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~--~Vdlvl~GH~H~YeR 512 (619)
+.+... +=+++|.|++ .. ...+. ....+-.++.++ -+-..|.||.|.=+-
T Consensus 355 e~~Gek-Vhil~HIPpG-~~--------~c~~~-ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 355 ESAGEK-VHILGHIPPG-DG--------VCLEG-WSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred HhcCCE-EEEEEeeCCC-Cc--------chhhh-hhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 544433 6688999982 11 11111 133555566665 255679999998653
No 48
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.56 E-value=1.7e-07 Score=90.13 Aligned_cols=57 Identities=19% Similarity=0.478 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh-------cCCCeEEccCCCccC
Q 007069 322 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA-------STVPYMIASGNHERD 379 (619)
Q Consensus 322 ~~~~~i~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~-------~~vP~~~v~GNHD~~ 379 (619)
.++.++++. .+||+|+++||+++.... ..+|.+..+.++.+. ..+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999965432 245665555554443 268999999999985
No 49
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.55 E-value=1.8e-06 Score=93.66 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=51.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCc-hhHHHHHHHhhhh-------
Q 007069 293 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 362 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~------- 362 (619)
.+||++++|+|.+...... ........+++++++. ..++|+||++||+...... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~---~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDP---VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccCCc---hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 4899999999987432110 0111234455665553 2689999999999965432 1112233333332
Q ss_pred -----h----------------------hcCCCeEEccCCCccC
Q 007069 363 -----I----------------------ASTVPYMIASGNHERD 379 (619)
Q Consensus 363 -----l----------------------~~~vP~~~v~GNHD~~ 379 (619)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1369999999999974
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.53 E-value=1.2e-06 Score=88.44 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=45.7
Q ss_pred EEEeecCCCCCCCCCcccccccchH-HHHHHHHHhcCCCCEEEEcCccccc----CCchhHHHHHHHhhhhhhc-CCCeE
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 370 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~-~~~~~i~~~~~~pDfVl~~GDi~y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 370 (619)
++++|+|.+... +... ..++.+.+...+||+|+++||+++. .......+++.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987421 1111 2233333332479999999999952 1112222344555566554 58999
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
No 51
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.52 E-value=1.3e-06 Score=82.20 Aligned_cols=148 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCC-
Q 007069 332 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN- 410 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~- 410 (619)
..=|.|+..|||+.+..-.. -..=++.+..+ ... -+.+.|||||.|+.... .+ -.+|..-
T Consensus 42 ~~eDiVllpGDiSWaM~l~e-a~~Dl~~i~~L-PG~-K~m~rGNHDYWw~s~sk-l~---------------n~lp~~l~ 102 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEE-AEEDLRFIGDL-PGT-KYMIRGNHDYWWSSISK-LN---------------NALPPILF 102 (230)
T ss_pred ChhhEEEecccchhheechh-hhhhhhhhhcC-CCc-EEEEecCCccccchHHH-HH---------------hhcCchHh
Confidence 34589999999998754321 11222333322 122 35699999998752210 00 0011000
Q ss_pred CCceEEEEEeCCEEEEEE---eCC-CCCCCCHHHH--------HHHHH-HHhhccCCCCCeEEEEeeccccCCCCccccC
Q 007069 411 RAKFWYSTDYGMFRFCVA---DTE-HDWREGTEQY--------KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAV 477 (619)
Q Consensus 411 ~~~~~Ysfd~G~v~fi~L---dt~-~~~~~~~~Q~--------~WL~~-~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~ 477 (619)
.-+ -.|.++++.++.. ++. .++.+-++|- .-|+. ..++. ++...-.||+.|.|+ ++...
T Consensus 103 ~~n--~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP-~s~~~---- 174 (230)
T COG1768 103 YLN--NGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAAL-PKGVSKFIVMTHYPP-FSDDG---- 174 (230)
T ss_pred hhc--cceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCC-CCCCC----
Confidence 000 0145555444432 222 2232233332 22333 12222 233445899999998 66531
Q ss_pred CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 478 DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 478 ~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
+ ...+.+++++++|+.++.||.|.-.|-.
T Consensus 175 --t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 175 --T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred --C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 1 1255677889999999999999987753
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.49 E-value=9.7e-06 Score=78.67 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=43.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCch-----hHHHHHHHhhhhhhcCCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~-----~~wd~f~~~i~~l~~~vP 368 (619)
.|++++||+|.+. ..++.+.+.+++ .++|.|+++||++...... ...++..+.++.+ ..|
T Consensus 1 mri~viSD~Hg~~------------~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL------------PATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH------------HHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 4899999999431 112233333332 6899999999999532210 0123334444332 358
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999963
No 53
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.41 E-value=4.4e-06 Score=85.15 Aligned_cols=188 Identities=15% Similarity=0.076 Sum_probs=86.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 370 (619)
++|++++|+|..-.+ . -+.+....+..++++. .++| +++.+||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 479999999943211 0 0111233344444432 3577 88999999954432 11111111222222222345
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCcccccc-ceee-ec---cCCCCCceEEEEEeCCEEE--EEEeCCCCCC-------C
Q 007069 371 IASGNHERDWPGTGSFYGNKDSGGECGVLA-ETMF-YV---PAENRAKFWYSTDYGMFRF--CVADTEHDWR-------E 436 (619)
Q Consensus 371 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f-~~---P~~~~~~~~Ysfd~G~v~f--i~Ldt~~~~~-------~ 436 (619)
.++||||+++... .+-.... +.+.++ .... .. ........|--++.+++++ +.+.+..... .
T Consensus 74 ~~~GNHe~d~g~~-~l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 74 VTIGNHEFDYGLD-ALAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred EeeccccccccHH-HHHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 6789999874221 0000000 000111 0000 00 0001123345567787554 4444332110 0
Q ss_pred ---CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 437 ---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 437 ---~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
-....+-+++..+.. +.+...+|++.|.+. .. ...+...+ .+||++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~-~~----------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEELL-AEGADVIILLSHLGL-DD----------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHHH-hCCCCEEEEEeccCc-cc----------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 011223343322221 246677999999886 10 11222222 6899999999998654
No 54
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.38 E-value=1.8e-06 Score=84.17 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.4
Q ss_pred cCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhh--------------------cCCCeEEccCCCccCC
Q 007069 331 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 380 (619)
Q Consensus 331 ~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~v~GNHD~~~ 380 (619)
..+||.|+++||+... +. .++|.+....+..+. ..+|++.++||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 43 344443222222211 1489999999999864
No 55
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.36 E-value=1.7e-05 Score=82.31 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=90.5
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccchHHHHHHHHHhc--CCCCEEEE-cCcccccCCchhHHH---------HHHHhh
Q 007069 294 QRVVIFGDMGKDEADG-SNEYNDFQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 360 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~-~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~-~GDi~y~~g~~~~wd---------~f~~~i 360 (619)
++|++++|+|..-... ...-..-..+....+..++++. .+++.++. +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999999542110 0000000012233444444432 45777766 999995432 12221 122333
Q ss_pred hhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecc-CCCCCceEEEEEeC-CEEE--EEEeCCCC-
Q 007069 361 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYG-MFRF--CVADTEHD- 433 (619)
Q Consensus 361 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G-~v~f--i~Ldt~~~- 433 (619)
..+ ... +.++||||+++... .+...- .+.+.++ .+..... .......|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKVI--KQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHHH--HhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 333 56789999875321 110000 0000111 0111000 00112345667888 7655 44433211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007069 434 -W-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 500 (619)
Q Consensus 434 -~-----------~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 500 (619)
+ ....+..++..+.|++ .+...+|+++|... ..... ... ..+.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~----~~~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESL----TGENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----ccc----CCccHHHHHHhcCCCCc
Confidence 1 0111234444444543 35678999999886 21100 000 002223344444 5899
Q ss_pred EEEecCcccce
Q 007069 501 IAIYGHVHNYE 511 (619)
Q Consensus 501 lvl~GH~H~Ye 511 (619)
++|.||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
No 56
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.29 E-value=2.5e-06 Score=85.61 Aligned_cols=138 Identities=20% Similarity=0.296 Sum_probs=80.7
Q ss_pred CCCCEEEEcCcccccCCc---------------------hhHHHH-HHH-----hhhhhhcCCCeEEccCCCccCCCCCC
Q 007069 332 KNIDIVFHIGDICYANGY---------------------ISQWDQ-FTA-----QIEPIASTVPYMIASGNHERDWPGTG 384 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~---------------------~~~wd~-f~~-----~i~~l~~~vP~~~v~GNHD~~~~~~~ 384 (619)
.+||++||+||.+|++.. ...+.. |.. .++.+.+++|++.++.+||+..+...
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999999852 111111 111 24556778999999999999643321
Q ss_pred CCCCCCCCC-C-----ccc-cccceeeeccCC-----CCCceEEEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007069 385 SFYGNKDSG-G-----ECG-VLAETMFYVPAE-----NRAKFWYSTDYGMF-RFCVADTEHDWREGTEQYKFIEHCLASV 451 (619)
Q Consensus 385 ~~y~~~dsg-g-----e~g-~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 451 (619)
. ....... . +.+ ..|......+.. .....|+++.+|.. .|++||+....
T Consensus 108 ~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R----------------- 169 (228)
T cd07389 108 D-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR----------------- 169 (228)
T ss_pred c-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc-----------------
Confidence 1 0000000 0 000 011111222211 23568999999996 99999998653
Q ss_pred cCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCe--EEEecCcccceee
Q 007069 452 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD--IAIYGHVHNYERT 513 (619)
Q Consensus 452 ~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd--lvl~GH~H~YeRt 513 (619)
+.|.+ + +..|+.|..++.+.++. ++|+|++|..+-.
T Consensus 170 --------------------d~W~~----~--~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------DSWDG----Y--PAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------ccccc----c--HHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 12211 1 11277777776655433 8899999986544
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.25 E-value=1.2e-05 Score=82.44 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=87.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCC-EEEEcCcccccCCchhHH---HHHHHhhhhhhcCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~v 367 (619)
++++.+.|+|.-... .... .+....+..++++. ++++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~~--~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGGP--VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCCC--cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 478899999832211 0011 11233444444432 4577 9999999995432 2111 1222222221 22
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccc-eeeeccCC-C---CCceEEEEEeCCEE--EEEEeCCCCC------
Q 007069 368 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE-TMFYVPAE-N---RAKFWYSTDYGMFR--FCVADTEHDW------ 434 (619)
Q Consensus 368 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~~Ysfd~G~v~--fi~Ldt~~~~------ 434 (619)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999864211 11000 000111110 00000100 0 12456778888855 5555544211
Q ss_pred CCC---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 435 REG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 435 ~~~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
..+ .+-.+.+++.+++..+.+..-+|++.|-+. . . . + .+...+ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-~------------d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-N------------D--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-h------------h--H-HHHHhC--CCCceEEecccceeE
Confidence 000 122233333332322246677899999875 1 0 0 1 222222 579999999999866
No 58
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.24 E-value=2.4e-05 Score=80.36 Aligned_cols=191 Identities=17% Similarity=0.224 Sum_probs=100.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCCch-----------hHHHHHHHhhhhh
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 363 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g~~-----------~~wd~f~~~i~~l 363 (619)
|++.||.|..- . .....+..+.+. ..++|++|+.||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899998531 1 111223333222 24699999999996322111 1233444444432
Q ss_pred h-cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCC---CCCC---
Q 007069 364 A-STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH---DWRE--- 436 (619)
Q Consensus 364 ~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~---~~~~--- 436 (619)
. ..+|++.+.||||-. .++.....|++.. .+.+.+-. ...+++++++|..|.... ++..
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v~---~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWVA---PNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCeec---CcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 467789999999952 1111111122210 11122211 123567899999887632 1111
Q ss_pred -----CHHHHHHHH-------HHHhhccCCCCCeEEEEeeccccCCCCccccCC-------CCC-----CchhhHHHHHH
Q 007069 437 -----GTEQYKFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-------GSF-----AEPMGRESLQK 492 (619)
Q Consensus 437 -----~~~Q~~WL~-------~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 492 (619)
...+...+. ..|... +.+--|++.|.|+ +..... +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 122332211 112221 1233689999998 654321 110 000 01335678899
Q ss_pred HHHhcCCeEEEecCccc-ceeeecc
Q 007069 493 LWQKYKVDIAIYGHVHN-YERTCPI 516 (619)
Q Consensus 493 ll~k~~Vdlvl~GH~H~-YeRt~p~ 516 (619)
++++.+.+.+|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777543
No 59
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.23 E-value=6.3e-05 Score=76.87 Aligned_cols=196 Identities=15% Similarity=0.153 Sum_probs=99.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccc-hHHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~-s~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
|++++||.=... ... ....+.++.++ .++||++..||++-.. |... ...+.+.. ..+-++ +
T Consensus 1 ~ilfigdi~g~~----------G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~~---~~~~~L~~--~G~D~i-T 63 (255)
T cd07382 1 KILFIGDIVGKP----------GRKAVKEHLPKLKKE-YKIDFVIANGENAAGGKGITP---KIAKELLS--AGVDVI-T 63 (255)
T ss_pred CEEEEEeCCCHH----------HHHHHHHHHHHHHHH-CCCCEEEECCccccCCCCCCH---HHHHHHHh--cCCCEE-E
Confidence 588999973211 000 11233444333 5699999999998443 2221 22222222 134444 5
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHHHhh
Q 007069 373 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEHCLAS 450 (619)
Q Consensus 373 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L~~ 450 (619)
.|||+++...-..+++..+ .+. ..-++|.......|.-++.+++++-+++- ......-..-++-+++.+++
T Consensus 64 lGNH~fD~gel~~~l~~~~------~~l-~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~ 136 (255)
T cd07382 64 MGNHTWDKKEILDFIDEEP------RLL-RPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEE 136 (255)
T ss_pred ecccccCcchHHHHHhcCc------Cce-EeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHH
Confidence 5999998642112221110 000 11123322234557778888866555442 22211111223445666665
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCcccc
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~ 530 (619)
.. .+...+||.+|--. .+ + ...+.. ....+||+++.||+|..---. +.
T Consensus 137 lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~-----~i--------- 184 (255)
T cd07382 137 LK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADE-----RI--------- 184 (255)
T ss_pred Hh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCcc-----EE---------
Confidence 53 25678999999642 11 1 223332 223469999999999853221 11
Q ss_pred CCCCceEEEE-eCCCCCC
Q 007069 531 GTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 531 ~~~~g~vyiv-~G~gG~~ 547 (619)
-++||.|+. .|+-|..
T Consensus 185 -l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 -LPGGTAYITDVGMTGPY 201 (255)
T ss_pred -eeCCeEEEecCccccCC
Confidence 136787776 6776653
No 60
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.21 E-value=5.3e-06 Score=82.38 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=44.6
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccC-----CchhHHHHH-HHhhhhhhcCCC
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 368 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~-----g~~~~wd~f-~~~i~~l~~~vP 368 (619)
++++|+|.+.... ........+++.. .++|.++++||+++.- ......... ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999875421 1112233333322 4899999999999531 111112222 333444456899
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
No 61
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.06 E-value=0.00022 Score=73.25 Aligned_cols=197 Identities=14% Similarity=0.073 Sum_probs=105.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCCCEEEEcCcccccC-CchhHHHHHHHhhhhhhcCCCeEE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s-~~~~~~i~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
.|++++||.=... +... ...+.++.++ .++||++..||++-.+ |... .-.+.+. ...+-++.
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~--~~GvDviT 64 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENTTHGKGLTL---KIYEFLK--QSGVNYIT 64 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCcccCCCCCCCH---HHHHHHH--hcCCCEEE
Confidence 4799999983210 1111 1233333333 4799999999999432 2221 2222222 12555655
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCCCC--CHHHHHHHHHH
Q 007069 372 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE--GTEQYKFIEHC 447 (619)
Q Consensus 372 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~--~~~Q~~WL~~~ 447 (619)
. |||+++....-.+.+ . ++. .....++|....+..|..++.++.++-+++-. ....+ ...=++-+++.
T Consensus 65 ~-GNH~~Dkge~~~~i~---~--~~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~ 136 (266)
T TIGR00282 65 M-GNHTWFQKLILDVVI---N--QKD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKEL 136 (266)
T ss_pred c-cchhccCcHHHHHHh---c--ccc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHH
Confidence 5 999998543111111 1 010 01112334333344566678888776665532 11111 11122334444
Q ss_pred HhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCc
Q 007069 448 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKN 527 (619)
Q Consensus 448 L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~ 527 (619)
+++.+ .+.+.+||.+|.-- .. .+.....+.+.+|++|+.-|+|..---..+
T Consensus 137 i~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------- 187 (266)
T TIGR00282 137 INMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI----------- 187 (266)
T ss_pred HHhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCccee-----------
Confidence 44442 24678999999542 01 234566777889999999999984322111
Q ss_pred cccCCCCceEEEE-eCCCCCC
Q 007069 528 YYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 528 ~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-++||-|++ +|+.|..
T Consensus 188 ----l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ----LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ----CCCCCEEEecCCcccCc
Confidence 146888988 7888864
No 62
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.04 E-value=0.00022 Score=73.53 Aligned_cols=190 Identities=11% Similarity=0.063 Sum_probs=88.8
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccchHHHHHHHHHhc--C-CCCEE-EEcCcccccCCchhHHHHHHHhh
Q 007069 294 QRVVIFGDMGKDEADGS---------NEYNDFQYASLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 360 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~s~~~~~~i~~~~--~-~pDfV-l~~GDi~y~~g~~~~wd~f~~~i 360 (619)
++|+.++|+|..-.... ..+... +-...+..++++. . ++|.+ +.+||+...... ..+.+.. .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~--gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMA--GGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCcccccccccccccccccccc--CcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46788888886432110 011111 2234455555542 3 78877 579999955432 2222111 12
Q ss_pred hhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecc-CCCCCceEEEEEeCCEE--EEEEeCCCCCC
Q 007069 361 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHDWR 435 (619)
Q Consensus 361 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~ 435 (619)
-..+..+++.++.||||++.... .+.... .+.+.++ .....-. ....-+.|.-++.++++ ||.+.+.....
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~--~l~~~~--~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPE--RVRELF--GRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHH--HHHHHH--hhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 22333466666669999874221 000000 0001111 0000000 00011235556888854 56665432100
Q ss_pred --C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007069 436 --E--------GTEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 503 (619)
Q Consensus 436 --~--------~~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 503 (619)
+ -....+.+++.+.+.. ..+...+|++.|-+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0123344544433321 245677999999875 10 0 1 1 2222 5799999
Q ss_pred ecCcccce
Q 007069 504 YGHVHNYE 511 (619)
Q Consensus 504 ~GH~H~Ye 511 (619)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999753
No 63
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=97.96 E-value=0.00054 Score=71.53 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=41.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe-
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY- 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~- 369 (619)
++++.++|+|..-.... ....-+.+-...+..++++. .++ .+++..||++......+.+..- +.+-.++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g-~~~~~~~n~~g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQD-EPTIEALNAMGVD 78 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccC-CcHHHHHHhhCCe
Confidence 47899999995422100 00000112234455555432 234 4899999999544332211110 111112222333
Q ss_pred EEccCCCccCC
Q 007069 370 MIASGNHERDW 380 (619)
Q Consensus 370 ~~v~GNHD~~~ 380 (619)
+.++||||+++
T Consensus 79 a~t~GNHefd~ 89 (288)
T cd07412 79 ASAVGNHEFDE 89 (288)
T ss_pred eeeeccccccc
Confidence 56789999985
No 64
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.93 E-value=2.3e-05 Score=77.87 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=42.7
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----------CCCCEEEEcCcccccCCchhHHHHHHHhhhhh---
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 363 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--- 363 (619)
+++||+|.. ...++++++.. .+.|.++++||++..+.... +.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~---~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI---EILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH---HHHHHHHHHHHH
Confidence 478999854 34566777653 25899999999995433222 233333222
Q ss_pred --hcCCCeEEccCCCccC
Q 007069 364 --ASTVPYMIASGNHERD 379 (619)
Q Consensus 364 --~~~vP~~~v~GNHD~~ 379 (619)
....+++.+.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999974
No 65
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.91 E-value=2.7e-05 Score=79.78 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=49.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCch-hHHHHHHHhhhhhhc-C-CC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~-~-vP 368 (619)
+||++++|+|.+....... .. ......++++++. ..++|+|+++||++...... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 5899999999875321110 00 0112234444332 25799999999999654322 122234444444433 3 89
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
No 66
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.89 E-value=0.00092 Score=64.27 Aligned_cols=64 Identities=14% Similarity=0.307 Sum_probs=40.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.++++++|+|...+. ......+. ...++|+|||+||.+..... . .+-.. -..+++.|.
T Consensus 2 m~ilviSDtH~~~~~------------~~~~~~~~-~~~~~d~vih~GD~~~~~~~-~---~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEKALKIF-NLEKVDAVIHAGDSTSPFTL-D---ALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhHHHHHh-hhcCCCEEEECCCcCCccch-H---Hhhcc-----cccceEEEE
Confidence 589999999976320 11122222 23689999999999954321 1 11110 146889999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
No 67
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.84 E-value=0.00046 Score=71.80 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=90.5
Q ss_pred ceEEEEEeecCCCCCCCC--Ccc-cccccchHHHHHHHHHh--cCCCC-EEEEcCcccccCCchhHHH-HHHHhhhhhhc
Q 007069 293 LQRVVIFGDMGKDEADGS--NEY-NDFQYASLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 365 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~--~~~-~~~~~~s~~~~~~i~~~--~~~pD-fVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~ 365 (619)
.++|+..+|+|..-.... ... ..+. +....++++.+. ..+++ +++..||....... ..+. .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~g-g~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~-~~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWG-DFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL-SDASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHH-HHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec-eeeecCCChHHHHHHH
Confidence 489999999996422100 000 0111 111222333221 13455 77889999954322 1111 00122333444
Q ss_pred CCCe-EEccCCCccCCCCCC-CCCCCCCCCCcccccc--ceeeeccC--C--CCCceEEEEEeC-CEE--EEEEeCCCC-
Q 007069 366 TVPY-MIASGNHERDWPGTG-SFYGNKDSGGECGVLA--ETMFYVPA--E--NRAKFWYSTDYG-MFR--FCVADTEHD- 433 (619)
Q Consensus 366 ~vP~-~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~--~~~f~~P~--~--~~~~~~Ysfd~G-~v~--fi~Ldt~~~- 433 (619)
.++| ..++||||++....+ ..+... ..+...|+ .+.+.-.. . .....|.-++.+ +++ +|.+-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5555 568999999742211 000000 00000111 11110000 0 011235556665 654 566644321
Q ss_pred ------CCCC--HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 007069 434 ------WREG--TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVD-IAI 503 (619)
Q Consensus 434 ------~~~~--~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~Vd-lvl 503 (619)
+... ..+.+|+.+.|++ .+..-+|++.|-.+ .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35667999999874 21 111 0 11222333443 567 799
Q ss_pred ecCcccc
Q 007069 504 YGHVHNY 510 (619)
Q Consensus 504 ~GH~H~Y 510 (619)
.||.|..
T Consensus 225 ~GHsH~~ 231 (282)
T cd07407 225 GGHSHVR 231 (282)
T ss_pred eCCcccc
Confidence 9999975
No 68
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.83 E-value=3.4e-05 Score=84.03 Aligned_cols=83 Identities=14% Similarity=0.237 Sum_probs=51.0
Q ss_pred eEEEEEeecCCCC-CCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCch-hHHHHHHHhhhhhh-cCCC
Q 007069 294 QRVVIFGDMGKDE-ADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIA-STVP 368 (619)
Q Consensus 294 ~rf~v~GD~g~~~-~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~-~~vP 368 (619)
+||++++|+|.+. .... .... ......+.++++. ..++||||++||+.+..... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~~--~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLNL--PSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhccC--ccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 4899999999983 2111 0011 1122344444432 16799999999999654321 11134555565543 3799
Q ss_pred eEEccCCCccC
Q 007069 369 YMIASGNHERD 379 (619)
Q Consensus 369 ~~~v~GNHD~~ 379 (619)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999974
No 69
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.75 E-value=6.8e-05 Score=81.92 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=47.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCCchhH-HHHHHHhhhhhhc-CCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~-wd~f~~~i~~l~~-~vP~ 369 (619)
+||++++|+|.+..-... ... ......++++++. ..+||+|+++||+.+....... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~~--~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSK--SRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCc--ccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 589999999987421000 000 0011223333332 2689999999999954322211 1223333333332 6899
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
No 70
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.75 E-value=0.00046 Score=71.98 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=29.1
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|-.. .... ..... ... ...+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 35667999999875 3211 00000 011 2233333333689999999999855
No 71
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.74 E-value=7e-05 Score=80.06 Aligned_cols=83 Identities=17% Similarity=0.248 Sum_probs=48.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC-chhHHHHHHHh--hhhhh-cCC
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 367 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~--i~~l~-~~v 367 (619)
+||++++|+|.+....... ........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~---~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPW---FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChh---hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 4899999999875321100 011112344554432 268999999999996532 22111123322 33332 379
Q ss_pred CeEEccCCCccC
Q 007069 368 PYMIASGNHERD 379 (619)
Q Consensus 368 P~~~v~GNHD~~ 379 (619)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
No 72
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.73 E-value=0.00044 Score=70.97 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-CCCeE
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 370 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~ 370 (619)
++++.++|+|..-..... +.+....+..++++. .+.++++.+||++.... ...+..-...++.+.. ...+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 478999999964321100 111233344444432 25789999999985422 1111111111222211 3444
Q ss_pred EccCCCccCC
Q 007069 371 IASGNHERDW 380 (619)
Q Consensus 371 ~v~GNHD~~~ 380 (619)
.++||||+++
T Consensus 74 ~~~GNHefd~ 83 (257)
T cd07408 74 VTPGNHEFDY 83 (257)
T ss_pred EccccccccC
Confidence 4689999974
No 73
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.71 E-value=0.00015 Score=77.80 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=73.7
Q ss_pred CCceEEEEEeecCCCCCCCCCccc----ccccchHHHHHHH---HHhcCCCCEEEEcCcccccCC--chhHHHHHHHhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQL---IQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIE 361 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~i---~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~ 361 (619)
+..+|+++++|.|.-+.-.+..+. .|..+ --+++. .....+||.++++||+.+.+. ..++|.+..+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHH
Confidence 456999999999986532211111 11110 011111 112368999999999995432 2567766665566
Q ss_pred hhhc---CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCCCC
Q 007069 362 PIAS---TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD 433 (619)
Q Consensus 362 ~l~~---~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~ 433 (619)
.+.. .+|.+.++||||.+.... .-.....||.- ..++..-+|+.|+.-|+++|++..
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehhh
Confidence 5543 799999999999864221 00001122210 012233568999999999998753
No 74
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.66 E-value=0.00017 Score=67.76 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=71.0
Q ss_pred HHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc
Q 007069 321 LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA 400 (619)
Q Consensus 321 ~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~ 400 (619)
...++.+.++..+.|++|.+||+.-.+....+|..|+.- .....+|.|++-||||
T Consensus 14 ~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~----------------------- 68 (150)
T cd07380 14 FEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP----------------------- 68 (150)
T ss_pred HHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC-----------------------
Confidence 344555544456799999999999554433334443332 2234788899999986
Q ss_pred ceeeeccCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCC-C
Q 007069 401 ETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-G 479 (619)
Q Consensus 401 ~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~-~ 479 (619)
+.-|++.|.|+ +......... .
T Consensus 69 --------------------------------------------------------~~DILlTh~wP-~gi~~~~~~~~~ 91 (150)
T cd07380 69 --------------------------------------------------------GVDILLTSEWP-KGISKLSKVPFE 91 (150)
T ss_pred --------------------------------------------------------CCCEEECCCCc-hhhhhhCCCccc
Confidence 23477777777 5432110000 0
Q ss_pred CCCchhhHHHHHHHHHhcCCeEEEecCcc-cceeeecccc
Q 007069 480 SFAEPMGRESLQKLWQKYKVDIAIYGHVH-NYERTCPIYQ 518 (619)
Q Consensus 480 ~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H-~YeRt~p~~~ 518 (619)
......+...+..++++.+..++|+||.| -|||- |..+
T Consensus 92 ~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~~ 130 (150)
T cd07380 92 ETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYRN 130 (150)
T ss_pred ccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-CccC
Confidence 00012346688889999999999999999 57764 5443
No 75
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.60 E-value=0.00077 Score=70.11 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=45.1
Q ss_pred eEEEEEeCCEE--EEEEeCCCC--C-C--CC---HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCc
Q 007069 414 FWYSTDYGMFR--FCVADTEHD--W-R--EG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 483 (619)
Q Consensus 414 ~~Ysfd~G~v~--fi~Ldt~~~--~-~--~~---~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~ 483 (619)
.|.-++.++++ ||.+-+... . . .+ .+-.+.+++.+++....+..-+|++.|-.. . +
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--~------------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--E------------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--h------------h
Confidence 35567888855 555544321 0 0 11 223455666665554345677889999764 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccce
Q 007069 484 PMGRESLQKLWQKYKVDIAIYGHVHNYE 511 (619)
Q Consensus 484 ~~~r~~l~~ll~k~~Vdlvl~GH~H~Ye 511 (619)
. + .|...+ .+||+++.||.|...
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 579999999999964
No 76
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.58 E-value=0.00013 Score=72.68 Aligned_cols=72 Identities=18% Similarity=0.197 Sum_probs=46.3
Q ss_pred EEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccC-CchhHHHHHHHh----hhhhhc-CCCeE
Q 007069 298 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQWDQFTAQ----IEPIAS-TVPYM 370 (619)
Q Consensus 298 v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~----i~~l~~-~vP~~ 370 (619)
+++|.|.+.. .|.....+.+.++. ..+.|.++++||++..- |. ..|.+..++ +..++. .+|++
T Consensus 2 FISDlHL~~~---------~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPK---------RPALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCC---------CcHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 6899998843 13333455556654 23569999999999531 22 245544443 333444 59999
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||+-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999963
No 77
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.52 E-value=0.0013 Score=74.86 Aligned_cols=200 Identities=17% Similarity=0.159 Sum_probs=88.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc------CC-CCEEEEcCcccccCCchhHHHHHHHhhhhh
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 363 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~------~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 363 (619)
...++|+.+.|+|..-... .+... + +..+..++++. .+ .-+++..||+.... ....+..- +.+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~~~--G-~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYGEY--G-LAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccCCc--c-HHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 11111 1 22333333321 13 35888899998532 12211110 111112
Q ss_pred hcCCCe-EEccCCCccCCCCCCCCCCCCCCCCccccccc-eeeeccC--CCCCceEEEEEeCCEE--EEEEeCCCC--C-
Q 007069 364 ASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLAE-TMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEHD--W- 434 (619)
Q Consensus 364 ~~~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 434 (619)
+..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 45679999986421 111000 01111110 0010110 0112345667888855 555544321 1
Q ss_pred CCC-------HHHHHHHHHHHhhccC-CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhc---CCeEEE
Q 007069 435 REG-------TEQYKFIEHCLASVDR-QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY---KVDIAI 503 (619)
Q Consensus 435 ~~~-------~~Q~~WL~~~L~~~~r-~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~---~Vdlvl 503 (619)
.+. .+..+-+++..++... .+..-+|++.|..+ ..... .+ +.. . .-..+.++. +||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~-~-~d~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA-P-GDVEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC-c-cHHHHHHhCCccCceEEE
Confidence 000 1112223333333321 45778999999876 22110 00 000 0 112334443 799999
Q ss_pred ecCcccce
Q 007069 504 YGHVHNYE 511 (619)
Q Consensus 504 ~GH~H~Ye 511 (619)
.||.|.+-
T Consensus 251 gGHsH~~~ 258 (551)
T PRK09558 251 GGHSQDPV 258 (551)
T ss_pred eCCCCccc
Confidence 99999853
No 78
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.48 E-value=0.0012 Score=81.43 Aligned_cols=196 Identities=16% Similarity=0.163 Sum_probs=90.0
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEE-cCcccccCCchh--HHHHHHHhhhhhhcC
Q 007069 290 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFH-IGDICYANGYIS--QWDQFTAQIEPIAST 366 (619)
Q Consensus 290 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~-~GDi~y~~g~~~--~wd~f~~~i~~l~~~ 366 (619)
+...+++++++|+|..- .+ + ......++++.+ .+++.++. +||++....... ++....+.+. .
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~g------~-~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln----~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-DG------A-AKRVTKIKEVKE--ENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMK----E 722 (1163)
T ss_pred CceEEEEEEEeecccCC-CC------H-HHHHHHHHHHHh--hCCCeEEEecCCCCCCcchhhhcCChHHHHHHh----C
Confidence 33459999999999431 10 1 111123333332 46777655 999985432111 1112222222 2
Q ss_pred CCe-EEccCCCccCCCCCC--CCCCCCC--CC----Ccccccc--ceeeeccCCC---CCceEEEEEeCCEE--EEEEeC
Q 007069 367 VPY-MIASGNHERDWPGTG--SFYGNKD--SG----GECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFR--FCVADT 430 (619)
Q Consensus 367 vP~-~~v~GNHD~~~~~~~--~~y~~~d--sg----ge~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~--fi~Ldt 430 (619)
+.+ +.++||||+++.... .+..... .. .....|+ .+.+...... ....|.-++.++++ ||.+-+
T Consensus 723 lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 333 559999999753210 0000000 00 0000111 1111111111 11345666888854 566654
Q ss_pred CCC--C-CC----C---HHHHHHHHHHHhhcc-CCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cC
Q 007069 431 EHD--W-RE----G---TEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YK 498 (619)
Q Consensus 431 ~~~--~-~~----~---~~Q~~WL~~~L~~~~-r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~ 498 (619)
..- + .+ + .+..+.+++..++.. ..+..-+|++.|... ... . ..+ ......|.++ -+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 0 01 0 122233444333332 145677999999875 211 0 001 1122334444 37
Q ss_pred CeEEEecCcccce
Q 007069 499 VDIAIYGHVHNYE 511 (619)
Q Consensus 499 Vdlvl~GH~H~Ye 511 (619)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999853
No 79
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.42 E-value=0.00056 Score=77.31 Aligned_cols=205 Identities=13% Similarity=0.125 Sum_probs=96.3
Q ss_pred CCCCCceEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh---cCCCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 288 PGQNSLQRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 288 ~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~i~~~---~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
......++|+...|+|..-... .+..... +.+..+..++++ ..+..++|..||+...+..... ..-.+.+-.
T Consensus 21 ~~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 21 AAETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred ccCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 3345569999999999764310 1110001 112222222222 2345789999999965332211 000111122
Q ss_pred hhcCCCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ceeeeccC--CCCCceEEEEEeCCEE--EEEEeCCC--C
Q 007069 363 IASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEH--D 433 (619)
Q Consensus 363 l~~~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~--~ 433 (619)
++..++| ..++||||++.... ++... -.+...|+ .+.+.-+. ....+.|.-++.++++ +|.+.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALARL--LDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHHH--HhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2333444 56999999985421 00000 00000111 01111111 1123567778888854 56665421 1
Q ss_pred CCC--------CHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEec
Q 007069 434 WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 505 (619)
Q Consensus 434 ~~~--------~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~G 505 (619)
+.. -....+++++.+.+..+....-+|++.|-++ ...... ..... .. ..... ..+|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~~--~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEVP--GD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-ccccc--cc--ccccc-----cCcceEecc
Confidence 111 1234566666666554333567899999886 222111 10000 00 11111 449999999
Q ss_pred Ccccc
Q 007069 506 HVHNY 510 (619)
Q Consensus 506 H~H~Y 510 (619)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
No 80
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.15 E-value=0.00083 Score=64.55 Aligned_cols=54 Identities=20% Similarity=0.398 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCch--hHHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
+.+++++ .+||.|+++||+++..... .++.. ..........+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEE-VAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCcccccccccCHHHHHH-HHHHHhccCCCeEEEEcccCccc
Confidence 3334433 6899999999999654321 11222 11233334578999999999974
No 81
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.11 E-value=0.0011 Score=68.63 Aligned_cols=65 Identities=17% Similarity=0.287 Sum_probs=44.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+++++||.|.. ...+++++++. ++.|.++++||+++. |..+ .+.++.+..+ ..++..
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 58999999854 34566666654 468999999999954 4332 2334444333 346889
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
No 82
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.10 E-value=0.0011 Score=66.94 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----C--------CCCEEEEcCcccccCCchhHHHHHHHhhhh
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 362 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~--------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 362 (619)
|++++||.|.. ...+++++++. . +.|.++++||+++. |..+ .+.++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 68999999865 34566666653 1 36899999999954 4322 234444444
Q ss_pred hhcCCCeEEccCCCcc
Q 007069 363 IASTVPYMIASGNHER 378 (619)
Q Consensus 363 l~~~vP~~~v~GNHD~ 378 (619)
+...-.+..+.||||.
T Consensus 64 l~~~~~~~~v~GNHE~ 79 (234)
T cd07423 64 MVAAGAALCVPGNHDN 79 (234)
T ss_pred HhhCCcEEEEECCcHH
Confidence 4333467899999996
No 83
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.04 E-value=0.0013 Score=66.87 Aligned_cols=76 Identities=14% Similarity=0.292 Sum_probs=47.3
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCCCEEEEcCcccccCC----c---------hhHHHHHHHh
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 359 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~~pDfVl~~GDi~y~~g----~---------~~~wd~f~~~ 359 (619)
++++|+|.+... + .......+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 111122333333322 25799999999996421 0 1224455566
Q ss_pred hhhhhcCCCeEEccCCCccC
Q 007069 360 IEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 360 i~~l~~~vP~~~v~GNHD~~ 379 (619)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
No 84
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.02 E-value=0.0095 Score=67.89 Aligned_cols=79 Identities=16% Similarity=0.134 Sum_probs=41.8
Q ss_pred ceEEEEEeCC--EEEEEEeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCC
Q 007069 413 KFWYSTDYGM--FRFCVADTEHD-W---REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSF 481 (619)
Q Consensus 413 ~~~Ysfd~G~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~ 481 (619)
..|.-++.++ +-||.|.+... . .++ ....+=+++..++....+..-+|++.|... ..
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~~---------- 196 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--EK---------- 196 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--HH----------
Confidence 3456678887 55777765321 1 111 011122222222222245677899999653 10
Q ss_pred CchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 482 AEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 482 ~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
. . .+.++ .+||++|.||.|.+-
T Consensus 197 --d--~----~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 197 --N--C----EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred --H--H----HHHhcCCCCCEEEeCCCCccc
Confidence 0 1 12333 379999999999964
No 85
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.00 E-value=0.0012 Score=66.44 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh--cCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 369 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 369 (619)
-+.++++|+|.+............| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3588999999874310000000011 112345555442 257999999999997654435555555555543 3599
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.++||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999953
No 86
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.99 E-value=0.0013 Score=62.93 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCC----CcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 297 VIFGDMGKDEADGS----NEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 297 ~v~GD~g~~~~~~~----~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+++|+|.+..... ..+...+......++.+.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 46889888754210 01111111111233444444567999999999996433 2222 2333332 3689999
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999964
No 87
>PHA02239 putative protein phosphatase
Probab=96.98 E-value=0.0016 Score=65.95 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCCCEEEEcCcccccCCchhHHHHHHHhhhhh-hcCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~----~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l-~~~vP~ 369 (619)
|++++||.|... ..++++++.. ...|.++++||+++ .|..+ .+..+.+..+ ....++
T Consensus 2 ~~~~IsDIHG~~---------------~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s--~~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGEY---------------QKLLTIMDKINNERKPEETIVFLGDYVD-RGKRS--KDVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCCH---------------HHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCCh--HHHHHHHHHHhhcCCCe
Confidence 689999999431 2234444432 23599999999995 44332 1223322222 234578
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.++||||..
T Consensus 64 ~~l~GNHE~~ 73 (235)
T PHA02239 64 VTLLGNHDDE 73 (235)
T ss_pred EEEECCcHHH
Confidence 9999999963
No 88
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.96 E-value=0.0019 Score=65.84 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-----------CCCCEEEEcCcccccCCchhHHHHHHHhhhhh
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI 363 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~-----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 363 (619)
|++++||.|.. ...+.+++++. +.-|.++++||+++ .|..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 68999999854 34566666652 13479999999995 44333 2333333333
Q ss_pred hcCCCeEEccCCCcc
Q 007069 364 ASTVPYMIASGNHER 378 (619)
Q Consensus 364 ~~~vP~~~v~GNHD~ 378 (619)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
No 89
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.88 E-value=0.0025 Score=63.19 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...++++++.. .++|.++++||+++.+... .+.++.+. ..+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 68999999843 23456666543 3689999999999644332 23333332 246889
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
No 90
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.84 E-value=0.017 Score=53.71 Aligned_cols=80 Identities=11% Similarity=0.159 Sum_probs=43.6
Q ss_pred EEEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007069 295 RVVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 372 (619)
Q Consensus 295 rf~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 372 (619)
.+.++||+|.+...- ...+.+...-....+....+....=|.+.|+||++...... ......++.+-..+ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 467789998875421 11222211111122333333344568999999999544322 23344455554443 789
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999964
No 91
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.81 E-value=0.0029 Score=63.51 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=43.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CCCEEEEcCcccccCCchhHHHHHHHhhhhhhc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 365 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 365 (619)
+.++||.|.. ...+++++++.. ..|.++++||+++. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 3689999865 345666666531 36899999999954 4332 234444444333
Q ss_pred CCCeEEccCCCccC
Q 007069 366 TVPYMIASGNHERD 379 (619)
Q Consensus 366 ~vP~~~v~GNHD~~ 379 (619)
.-.+..+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 34688899999963
No 92
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.81 E-value=0.0036 Score=70.47 Aligned_cols=82 Identities=13% Similarity=0.290 Sum_probs=51.2
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h-------cCCCCEEEEcCcccccCCc-------------
Q 007069 291 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 349 (619)
Q Consensus 291 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~-------~~~pDfVl~~GDi~y~~g~------------- 349 (619)
....++++++|+|.+... + ....+..+.+.+. . ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987431 1 0111222222222 1 2579999999999964221
Q ss_pred hhHHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 350 ISQWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 350 ~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
..+++.+.+.++.+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112344555666666789999999999974
No 93
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.76 E-value=0.01 Score=62.81 Aligned_cols=39 Identities=28% Similarity=0.181 Sum_probs=25.2
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|--- +. +. ..|.++ .+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH------HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999631 11 01 123444 379999999999864
No 94
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.66 E-value=0.004 Score=62.29 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=42.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...+++++++. .+.|-++++||+++. |..+ .+-++.+.. ..+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDr-Gp~s--~~vl~~l~~----~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDR-GPQS--LRCLQLLEE----HWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCC-CcCH--HHHHHHHHc----CCceE
Confidence 89999999865 34566666654 257999999999954 4322 123333322 24578
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999953
No 95
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.64 E-value=0.023 Score=67.09 Aligned_cols=96 Identities=20% Similarity=0.253 Sum_probs=46.9
Q ss_pred cCCCCCCCCceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCC-CEEEEcCcccccCCchhHHHH---
Q 007069 284 ASPYPGQNSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQ--- 355 (619)
Q Consensus 284 T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~--- 355 (619)
+.|..+..-.++|+...|+|..-... ..|.. -...-+..+..++++. +++ -+++..||++...-. ..+..
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~-dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl-~~~~a~~~ 183 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNY-DYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPL-GTYKAIVD 183 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccc-cccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-cchhhhcc
Confidence 44544445569999999999763210 00100 0011123333444432 223 488899999964321 11100
Q ss_pred --HH---HhhhhhhcCCCe-EEccCCCccCCC
Q 007069 356 --FT---AQIEPIASTVPY-MIASGNHERDWP 381 (619)
Q Consensus 356 --f~---~~i~~l~~~vP~-~~v~GNHD~~~~ 381 (619)
+. ..+-.++..+.| ..++||||+++.
T Consensus 184 ~~~~g~~~P~i~amN~LGyDA~tLGNHEFDyG 215 (814)
T PRK11907 184 PVEEGEQHPMYAALEALGFDAGTLGNHEFNYG 215 (814)
T ss_pred ccccCcchHHHHHHhccCCCEEEechhhcccC
Confidence 00 011222233333 468999999853
No 96
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.64 E-value=0.26 Score=49.47 Aligned_cols=198 Identities=20% Similarity=0.156 Sum_probs=109.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
+|++++||+=... |. ....+-+..+.++ -++||||..|-++ ++|.---|+.|.+.++. .+-+ ++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~dv-iT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GADV-ITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCCE-Eec
Confidence 4899999983221 00 0011223333332 4799999999999 67765556666666543 3333 589
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC--CCCCC-CHHHHHHHHHHHhh
Q 007069 374 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE-GTEQYKFIEHCLAS 450 (619)
Q Consensus 374 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~-~~~Q~~WL~~~L~~ 450 (619)
|||=++.+..-.+....+ . .-.-.+.|....+.-|.-|+..+..+.+++-. ..... -..=.+=+++.|.+
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999986433211111000 0 01112344444566677788877666655532 22111 12223445566665
Q ss_pred ccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCcccc
Q 007069 451 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 530 (619)
Q Consensus 451 ~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~ 530 (619)
.+ .+++-+||-+|.-- +| |. .-.-++-+-+|.+|+.=|+|.-.--+.+
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------EK----~a~g~yldGrvsavvGTHTHV~TaD~rI-------------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------EK----NAFGWYLDGRVSAVVGTHTHVPTADERI-------------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------hh----hhhheEEcCeEEEEEeccCcccccccee--------------
Confidence 43 45677888899642 11 11 1112233567999999999984433222
Q ss_pred CCCCceEEEE-eCCCCC
Q 007069 531 GTLNGTIHVV-AGGGGA 546 (619)
Q Consensus 531 ~~~~g~vyiv-~G~gG~ 546 (619)
-++|+-|+. .|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 246888887 777775
No 97
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.49 E-value=0.0067 Score=60.72 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
|++++||.|.. ...+++++++. .+.|.++++||+++.+.... +.++.++ .-.++.
T Consensus 16 ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~~ 73 (218)
T PRK09968 16 HIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFIS 73 (218)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcEE
Confidence 89999999854 23456666554 36899999999995433222 2223222 224678
Q ss_pred ccCCCcc
Q 007069 372 ASGNHER 378 (619)
Q Consensus 372 v~GNHD~ 378 (619)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
No 98
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.42 E-value=0.022 Score=70.68 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007069 454 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 511 (619)
Q Consensus 454 ~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl~GH~H~Ye 511 (619)
.+..-+|++.|..+ ..... ..+ . ......|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~--~~~~~--~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEYQ--SSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCCC--CCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46777999999875 21110 011 0 2233445544 489999999999964
No 99
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.42 E-value=0.007 Score=62.06 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=42.1
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.++||.|.. ...+++++++. ++.|.++++||++. .|..+ .+.++.+..+. ..+..+.
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 589999854 34566666653 35799999999995 44433 23444444332 3678999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
No 100
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.29 E-value=0.12 Score=53.03 Aligned_cols=136 Identities=11% Similarity=0.138 Sum_probs=75.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h---------cCCCCEEEEcCcccccCCc----------------
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 349 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~-~---------~~~pDfVl~~GDi~y~~g~---------------- 349 (619)
+++++|++.+... + ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987531 1 1112233333332 1 1345679999999964331
Q ss_pred ---hhHHHHHHHhhhhhhcCCCeEEccCCCccCCCC--CCCCCCCCCCCCccccccc---eeeeccCCCCCceEEEEEeC
Q 007069 350 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPG--TGSFYGNKDSGGECGVLAE---TMFYVPAENRAKFWYSTDYG 421 (619)
Q Consensus 350 ---~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~--~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G 421 (619)
..+.+++-+.+..+.+.+|+.+.|||||-.... +..+- .|-.+-. ..+.. -.|. |.|+.+
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh-------~~lfp~s~~~~~~~~----vtNP-~~~~i~ 142 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLH-------RCLFPKSSNYSTLNL----VTNP-YEFSID 142 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCC-------HHHhhcccccCCcEE----eCCC-eEEEEC
Confidence 223444555666777899999999999964211 00110 0000000 01111 1222 569999
Q ss_pred CEEEEEEeCCCC-----CCCCHHHHHHHHHHHhh
Q 007069 422 MFRFCVADTEHD-----WREGTEQYKFIEHCLAS 450 (619)
Q Consensus 422 ~v~fi~Ldt~~~-----~~~~~~Q~~WL~~~L~~ 450 (619)
+++|++.+...- +.+.+.-.+.|++.|+-
T Consensus 143 g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 143 GVRVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred CEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 999998876531 33344456777777763
No 101
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.28 E-value=0.017 Score=63.32 Aligned_cols=54 Identities=15% Similarity=0.165 Sum_probs=37.5
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCCCEEEEcCcccccCC
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG 348 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~--~~~pDfVl~~GDi~y~~g 348 (619)
..+||++..|.|.+...... .-...+..++.+|+.- .++.|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35999999999986432111 1123456777776653 368999999999997763
No 102
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.25 E-value=0.086 Score=62.16 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=28.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCC-CEEEEcCccccc
Q 007069 293 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYA 346 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~p-DfVl~~GDi~y~ 346 (619)
.++|+...|+|..-... ..|.. -...-+..+..++++. +++ -++|..||++..
T Consensus 39 ~L~IL~TnDiHg~l~~~-dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMNY-DYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcCc-CccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 58999999999764211 00100 0011233344444432 223 488899999954
No 103
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.24 E-value=0.013 Score=60.70 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=39.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--------CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 365 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 365 (619)
+++++||.|... ..++++++.. ...+.++++||+++.+.... +.++.+..+..
T Consensus 3 ~iyaIGDIHG~~---------------d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~---eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGYI---------------SKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR---KVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCCH---------------HHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH---HHHHHHHHhhhc
Confidence 589999998652 2344443321 13568999999995443322 23333322222
Q ss_pred --CCCeEEccCCCccC
Q 007069 366 --TVPYMIASGNHERD 379 (619)
Q Consensus 366 --~vP~~~v~GNHD~~ 379 (619)
...++.+.||||..
T Consensus 65 ~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 65 HPKQRHVFLCGNHDFA 80 (304)
T ss_pred ccccceEEEecCChHH
Confidence 22478899999953
No 104
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.13 E-value=0.084 Score=53.45 Aligned_cols=171 Identities=15% Similarity=0.088 Sum_probs=83.9
Q ss_pred CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCC
Q 007069 332 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 411 (619)
Q Consensus 332 ~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 411 (619)
-++||||..|.++ ++|.---...+.+.++ ..+-+ .+.|||=++..+-..+.+.. . ..-.-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE---P----RILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH----S----SEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC---C----CcEECCCCCCCCC
Confidence 4799999999999 5554221122222221 23444 58899998743321111100 0 0011123455556
Q ss_pred CceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHH
Q 007069 412 AKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRES 489 (619)
Q Consensus 412 ~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 489 (619)
+.-|..++.++.++.++|-. ....+...=+.-+++.|++. +.+.+.+||=+|.=- + . -+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa---T----------S----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA---T----------S----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S----H----------H----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc---H----------H----HHH
Confidence 78899999999877777643 22322223345555666554 357788888899532 0 0 123
Q ss_pred HHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEE-eCCCCCC
Q 007069 490 LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVV-AGGGGAG 547 (619)
Q Consensus 490 l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 547 (619)
-.-.+-+-+|.+|+-=|+|.---- .++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVqTaD-----erI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQTAD-----ERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS-BS-------EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCccCch-----hhc----------cCCCCEEEecCccccCc
Confidence 344556789999999999983221 121 246888887 7777764
No 105
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.13 E-value=0.018 Score=47.36 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=43.2
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEe
Q 007069 175 APVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 252 (619)
Q Consensus 175 ~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 252 (619)
+|..+++... ..+++.|+|..... .....-.|+|....+... ....+. ++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD---WQEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE---EEEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee---eeeeee-----------------eeeeeeeee
Confidence 4555555443 47899999999741 111234556654433220 000111 112337788
Q ss_pred cCCCCCCEEEEEEeeec
Q 007069 253 KELWPNAMYTYKVGHRL 269 (619)
Q Consensus 253 tgL~P~t~Y~Yrvg~~~ 269 (619)
+||+|+++|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998754
No 106
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.12 E-value=0.008 Score=60.89 Aligned_cols=174 Identities=23% Similarity=0.304 Sum_probs=95.3
Q ss_pred CEEEEcCcccccCCch-------hHHHHHHHh----hhhhhcCCCeEEccCCCccCCCC---CCCCCCCC--CC---CCc
Q 007069 335 DIVFHIGDICYANGYI-------SQWDQFTAQ----IEPIASTVPYMIASGNHERDWPG---TGSFYGNK--DS---GGE 395 (619)
Q Consensus 335 DfVl~~GDi~y~~g~~-------~~wd~f~~~----i~~l~~~vP~~~v~GNHD~~~~~---~~~~y~~~--ds---gge 395 (619)
==++..||++.+.|-+ .++.+|-.. ..++...+|+|+-.||||.+-.. +-.+|+.. +. ...
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 3466778999765421 122222211 23344579999999999986321 11222110 00 000
Q ss_pred cccccceeeeccCC--CCCceEEEEEeCCEEEEEEeCCCCCC-CC-HHHHHHHHHHHhhccCCCCCeEEEEeeccc-cCC
Q 007069 396 CGVLAETMFYVPAE--NRAKFWYSTDYGMFRFCVADTEHDWR-EG-TEQYKFIEHCLASVDRQKQPWLIFLAHRVL-GYS 470 (619)
Q Consensus 396 ~g~~~~~~f~~P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~~~-~~-~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~-~ys 470 (619)
.++-++. ++|.. +....-||+|+|++|.+-+-+...-. ++ .--+-||+.+|.......+| ++++.|.-. .++
T Consensus 208 ~~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 208 SDVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 0000100 11211 22344589999999988775542111 11 12357999999876545667 888888632 234
Q ss_pred CCccccC------CCC-----CCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007069 471 SGIFYAV------DGS-----FAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 512 (619)
Q Consensus 471 s~~~~~~------~~~-----~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeR 512 (619)
+..|... .|. ...+. |..|...++-|+|-..+.||.|.+.-
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccce
Confidence 3333211 111 11223 77899999999999999999998743
No 107
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.09 E-value=0.014 Score=58.23 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=40.9
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhc-CCCeEEcc
Q 007069 297 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 373 (619)
Q Consensus 297 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~~v~ 373 (619)
.++||+|.. ...+.+++++. ...|.++++||+++. |... .+.++.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 23455666543 368999999999954 3322 222333322211 45789999
Q ss_pred CCCccC
Q 007069 374 GNHERD 379 (619)
Q Consensus 374 GNHD~~ 379 (619)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
No 108
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=95.65 E-value=0.14 Score=59.25 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=42.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--C-CCCEEEEcCcccccCCchhHHHHHH-------Hhh
Q 007069 293 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQFT-------AQI 360 (619)
Q Consensus 293 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~-~pDfVl~~GDi~y~~g~~~~wd~f~-------~~i 360 (619)
.++++...|+|..-... ..|.. -...-+..+..++++. + .--+++..||++..... ..|.... ..+
T Consensus 2 ~l~Il~TnDlH~~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~ 79 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDY-DYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPV 79 (626)
T ss_pred eEEEEEEcCCccCccCC-cccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChH
Confidence 37899999999763210 00000 0011123334444332 1 23588899999964322 2121110 011
Q ss_pred hhhhcCCCe-EEccCCCccCC
Q 007069 361 EPIASTVPY-MIASGNHERDW 380 (619)
Q Consensus 361 ~~l~~~vP~-~~v~GNHD~~~ 380 (619)
-.++..+.| ..++||||+++
T Consensus 80 ~~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 80 YKAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHHhhcCccEEecccccccc
Confidence 112233333 46899999975
No 109
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.62 E-value=0.17 Score=58.90 Aligned_cols=87 Identities=20% Similarity=0.254 Sum_probs=42.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CC-CCEEEEcCcccccCCchhHHHHHHH-------h
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTA-------Q 359 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~i~~~~--~~-pDfVl~~GDi~y~~g~~~~wd~f~~-------~ 359 (619)
..++|+...|+|..-... ..|.+ -...-+..+..++++. +. --+++..||++.... ...|..+.. .
T Consensus 24 ~~L~IL~TnDlHg~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp-~~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDF-DYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSP-LGDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCC-ccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCch-hhhhhhhccccCCCcch
Confidence 459999999999753211 00000 0011123334444432 22 348888999995432 222211110 1
Q ss_pred hhhhhcCCCe-EEccCCCccCC
Q 007069 360 IEPIASTVPY-MIASGNHERDW 380 (619)
Q Consensus 360 i~~l~~~vP~-~~v~GNHD~~~ 380 (619)
+-..+..+.| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 46899999975
No 110
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.47 E-value=0.032 Score=57.66 Aligned_cols=64 Identities=14% Similarity=0.253 Sum_probs=41.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 371 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 371 (619)
+..++||.|.. ...++++++++ +..|-++++||++..+.... +.++.+..+. -.+..
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 46899999865 34566666654 35799999999995443322 2333333321 13568
Q ss_pred ccCCCcc
Q 007069 372 ASGNHER 378 (619)
Q Consensus 372 v~GNHD~ 378 (619)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
No 111
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=95.29 E-value=0.16 Score=51.30 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=38.1
Q ss_pred HHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 442 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 442 ~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
+-+++.+++++ ++...+|++.|-...|.. ..... ...+...+.+.++|+++.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YPTPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CCCHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 34555555553 347889999996541211 00111 345555666679999999999987643
No 112
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.25 E-value=0.087 Score=55.26 Aligned_cols=184 Identities=21% Similarity=0.302 Sum_probs=96.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCCCEEEEcCcccccCC-c-------hhHH---HHHHHhhh
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANG-Y-------ISQW---DQFTAQIE 361 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~-~~~pDfVl~~GDi~y~~g-~-------~~~w---d~f~~~i~ 361 (619)
+|++|-|++|..- .....++..+-+. ..++|++|..||+---+. . ...+ ..|++...
T Consensus 1 MrIaVqGCcHG~L-----------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-----------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhH-----------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 4789999997431 0112333333322 147999999999863221 1 1222 23444442
Q ss_pred -hhhcCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccceeeeccCCCCCceEEEEEeCCEEEEEEeCC---CCCCCC
Q 007069 362 -PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE---HDWREG 437 (619)
Q Consensus 362 -~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~---~~~~~~ 437 (619)
.+.+.+|.+++=||||... +......||=. ..+.|.|- +--...+|+||+-.|+.- ++|..|
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGwV---ApNIyYlG------~agVv~~~gvRIggiSGI~k~~dy~kg 135 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGWV---APNIYYLG------YAGVVNFGGVRIGGISGIYKEHDYRKG 135 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCcee---ccceEEee------ecceEEECCEEEeeccchhhhhhcccC
Confidence 3456789999999999641 11111111110 01112121 001367899999888753 333321
Q ss_pred -----------------HHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCC------CC-C-----CchhhHH
Q 007069 438 -----------------TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD------GS-F-----AEPMGRE 488 (619)
Q Consensus 438 -----------------~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~------~~-~-----~~~~~r~ 488 (619)
-.+++ ...|.+ -+.|--|++.|-=+ -+.. .|++. .. + ...+|..
T Consensus 136 h~E~ppyn~stiRsiYHvR~~d--V~~Lkq---lk~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie~~~LGSp 208 (456)
T KOG2863|consen 136 HFEWPPYNNSTIRSIYHVRISD--VAKLKQ---LKHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIEEGKLGSP 208 (456)
T ss_pred CCCCCCccchhhhhhhhhhhhh--hHHHHh---hcCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHhcCCcCCh
Confidence 11111 122333 24565688888633 1111 11110 00 0 0123456
Q ss_pred HHHHHHHhcCCeEEEecCccc
Q 007069 489 SLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 489 ~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+++||++-+...+|+.|.|.
T Consensus 209 ~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 209 ALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHHhCcchhhhhhHhh
Confidence 889999999999999999997
No 113
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=95.10 E-value=0.052 Score=57.39 Aligned_cols=67 Identities=19% Similarity=0.153 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---CCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~ 369 (619)
+++++||+|.. ...+.++++...- -+..+++||+++. |..+ -+-+..+-.+. ..--+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVDR-G~~s--~Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVDR-GKRS--IEILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccCC-CCCc--HHHHHHHHHHhhcCCCcE
Confidence 58999999854 3456666665322 3679999999954 4332 12222222211 12247
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
No 114
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=95.09 E-value=0.53 Score=56.57 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=77.3
Q ss_pred cceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccc----cCCCCCcc-eeeecCCCCCcEEEEEEeCCCCCCCc
Q 007069 132 GKGSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAF----TNPNAPVY-PRLAQGKTWNEMTVTWTSGYGINEAE 204 (619)
Q Consensus 132 g~~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~----~~~~~P~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 204 (619)
-......+|-+++. +|+|++-.-+..-+-. .|..|++ .-|.+|-| +.|.... .++++|.|..........
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~--sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGV--SSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCCCC--CCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccc
Confidence 45566777778886 7888776632211100 1222221 24556666 8775554 799999999876543333
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007069 205 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 284 (619)
Q Consensus 205 ~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 284 (619)
...-|...............++. .|....-.+.+|+|+|.|.+||.....+|.+..|++..|.|
T Consensus 647 ~itgYkIRy~~~~~~~~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT 710 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSREDEVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAET 710 (1381)
T ss_pred eEEEEEEEecccCcccccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccC
Confidence 44444332111100011111111 11112223578999999999998877778777889999988
Q ss_pred CC
Q 007069 285 SP 286 (619)
Q Consensus 285 ~p 286 (619)
+-
T Consensus 711 ~~ 712 (1381)
T KOG4221|consen 711 PE 712 (1381)
T ss_pred cc
Confidence 63
No 115
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=94.73 E-value=0.47 Score=48.03 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007069 444 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 513 (619)
Q Consensus 444 L~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt 513 (619)
+++.+++++ .+...+|++.|--..|... .... ...+...+.+.+||+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~---------p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE---------PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC---------CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444555543 3578899999976422110 0111 334555555578999999999988754
No 116
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.69 E-value=0.095 Score=52.63 Aligned_cols=84 Identities=15% Similarity=0.241 Sum_probs=49.7
Q ss_pred eEEEEEeecCCCCCCCC----Ccccccccc-hHHHHHHHHHhcCCCCEEEEcCcccccCCc--hhHHHHHHHhhhhhhcC
Q 007069 294 QRVVIFGDMGKDEADGS----NEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAST 366 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~----~~~~~~~~~-s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~ 366 (619)
-+.++++|.|.+-...- ...-.+|.. ....++++++. .+|+-++++||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 36899999998743100 000112221 12344445554 689999999999977554 34554333333332222
Q ss_pred CCeEEccCCCccC
Q 007069 367 VPYMIASGNHERD 379 (619)
Q Consensus 367 vP~~~v~GNHD~~ 379 (619)
-+..+.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999965
No 117
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=94.25 E-value=0.57 Score=54.19 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=34.7
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 247 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
..+|+|+||+|||.|.+||......|-+.+|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 35788999999999999999876556667899999999875
No 118
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=94.16 E-value=0.13 Score=54.24 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCC--CeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~ 370 (619)
+++++||+|.. ...+.++++... ..+-++++||+++ .|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999854 234555555433 3488999999995 44322 12222222222222 478
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
No 119
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=93.45 E-value=0.18 Score=54.43 Aligned_cols=67 Identities=21% Similarity=0.223 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CC-CEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCe
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 369 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~--~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~ 369 (619)
++.++||+|.. ...+.++++... .. +.++++||+++ .|... -+.+..+..+. ..--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEeccccC-CCCCh--HHHHHHHHHHhhccCCeE
Confidence 58999999854 345666666432 22 45999999994 45332 12222222221 12347
Q ss_pred EEccCCCccC
Q 007069 370 MIASGNHERD 379 (619)
Q Consensus 370 ~~v~GNHD~~ 379 (619)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
No 120
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=93.08 E-value=0.79 Score=36.84 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=25.5
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007069 246 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFK 283 (619)
Q Consensus 246 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~ 283 (619)
-...+.+.+|.|+++|.++|.....++...|+....|+
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~~ 92 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCccccccc
Confidence 34677789999999999999765333333444434443
No 121
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=92.88 E-value=0.34 Score=50.16 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 370 (619)
+++++||+|.. ...+.++++.. ...+-++++||+++ .|... -+.+..+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s--~e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFS--IEVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccC-CCCCh--HHHHHHHHHHHhcCCCCEE
Confidence 58999999854 23455555542 34678999999995 44332 1222222221 1223578
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999975
No 122
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=92.76 E-value=0.27 Score=51.27 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCCCEEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007069 295 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 370 (619)
Q Consensus 295 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 370 (619)
.+.++||+|.. ...+.++++.. +..+-++++||+++ .|.... +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYVD-RGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEECC-CCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38999999854 23455555542 34567899999995 454321 2222222221 233588
Q ss_pred EccCCCccC
Q 007069 371 IASGNHERD 379 (619)
Q Consensus 371 ~v~GNHD~~ 379 (619)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
No 123
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=92.46 E-value=0.35 Score=51.13 Aligned_cols=23 Identities=13% Similarity=0.436 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHhcCCeEEEecCc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHV 507 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~ 507 (619)
.+.+.++..++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999998
No 124
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.38 E-value=1.2 Score=41.44 Aligned_cols=86 Identities=26% Similarity=0.304 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeeeccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCcc
Q 007069 487 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 566 (619)
Q Consensus 487 r~~l~~ll~k~~Vdlvl~GH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~ 566 (619)
.+.|.-|-++.+||+.++||+|.++... -+|-.||--|++-.... . +.......
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~P 149 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVP 149 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCC
Confidence 3477777788999999999999988763 24667777777632211 1 11111456
Q ss_pred cEEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007069 567 GFVKLTAFDHSNLLFEYKKSSDGKV-YDSFRISR 599 (619)
Q Consensus 567 Gy~~l~v~n~~~l~~~~~~~~dG~v-~D~f~i~k 599 (619)
.|+.+++ .++.+..-.++--||+| +|.....|
T Consensus 150 SFvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 150 SFVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ceEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 7999998 55555444444567775 45555444
No 125
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=92.25 E-value=0.34 Score=50.79 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
+.+.++..+++++.++++=||.-.
T Consensus 221 g~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 221 GKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred CHHHHHHHHHHcCCeEEEECCccc
Confidence 578999999999999999999854
No 126
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.61 E-value=0.49 Score=49.77 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.++..+++++.++++=||.-.
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhh
Confidence 3578999999999999999999844
No 127
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=91.56 E-value=0.48 Score=50.14 Aligned_cols=25 Identities=12% Similarity=0.321 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.+...+++++.++++=||.-.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999843
No 128
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=91.46 E-value=10 Score=45.78 Aligned_cols=191 Identities=15% Similarity=0.087 Sum_probs=105.0
Q ss_pred ccceecccCccccEEEEEEeCC-----CCCCCCEEEEEeCCCCCCCCCCCCCCCCCCCCccCCCceeEEeccCCCCcccc
Q 007069 57 SPAVVGLKGQNSEWVTVEYSSP-----NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 131 (619)
Q Consensus 57 ~p~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 131 (619)
.|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-..|
T Consensus 719 ~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~--- 788 (1051)
T KOG3513|consen 719 NPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF--- 788 (1051)
T ss_pred CCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc---
Confidence 4444444455668899999984 344556777788875541 1110001001113566776543233
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEE
Q 007069 132 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQW 209 (619)
Q Consensus 132 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~y 209 (619)
=.-.++++.+|.+-+= ...++.+.-|+.= .-+.+|..+.+ ..-+.++|.|.|....- .....-.|+|
T Consensus 789 tpyevKVqa~N~~GeG--------p~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y 857 (1051)
T KOG3513|consen 789 TPYEVKVQAINDQGEG--------PESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVKY 857 (1051)
T ss_pred ceeEEEEEEecCCCCC--------CCCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEEE
Confidence 3457888899887532 2233444555432 12455655554 44457999999954322 1234467888
Q ss_pred eecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007069 210 GRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 287 (619)
Q Consensus 210 g~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 287 (619)
....+... ...... -.+-.-.++|+||+|+|.|++.|..-..-|.+.-|...+-+|.+.
T Consensus 858 ~~~~~~~~--~~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~ 916 (1051)
T KOG3513|consen 858 WKINEKEG--SLSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKA 916 (1051)
T ss_pred EEcCCCcc--ccccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCC
Confidence 86544321 011111 123456778999999999999998654334333344444445443
No 129
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.22 E-value=0.7 Score=50.80 Aligned_cols=78 Identities=18% Similarity=0.384 Sum_probs=51.2
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-------CCCCEEEEcCcccccCC-c------------hh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-------KNIDIVFHIGDICYANG-Y------------IS 351 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~-------~~pDfVl~~GDi~y~~g-~------------~~ 351 (619)
..+++++++|.|.+.. +|. ...+...++-+ .+...++.+||+++.-| + ..
T Consensus 224 e~v~v~~isDih~GSk----~F~------~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFL------EDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYE 293 (481)
T ss_pred cceEEEEEeeeecccH----HHH------HHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchH
Confidence 4588999999998642 321 11222222222 33579999999996432 1 23
Q ss_pred HHHHHHHhhhhhhcCCCeEEccCCCccC
Q 007069 352 QWDQFTAQIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 352 ~wd~f~~~i~~l~~~vP~~~v~GNHD~~ 379 (619)
|++++-+.+..+-..+-+++.|||||..
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 5666666666666788899999999975
No 130
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=90.85 E-value=0.59 Score=49.49 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007069 485 MGRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 485 ~~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
No 131
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=90.68 E-value=0.54 Score=49.28 Aligned_cols=24 Identities=13% Similarity=0.300 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
+.+.++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 578999999999999999999843
No 132
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=88.35 E-value=3.6 Score=46.41 Aligned_cols=55 Identities=24% Similarity=0.255 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHh-c-CCeE-EEecCcccc
Q 007069 439 EQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-Y-KVDI-AIYGHVHNY 510 (619)
Q Consensus 439 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~-~Vdl-vl~GH~H~Y 510 (619)
.|.+|-.+.++. .+..-+|+++|.|. ..+ . + ++.+...+++ + ++++ ||-||.|..
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~--~~~----~-----e---~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPV--RDD----D-----E---WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred hccchHHHHhhc---cCccEEEEeccccc--ccc----h-----h---hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 467787777765 56677899999996 221 0 1 2233334444 3 6788 999999983
No 133
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=87.53 E-value=4.2 Score=45.81 Aligned_cols=93 Identities=19% Similarity=0.338 Sum_probs=61.7
Q ss_pred EEEEEeC---CCCCCCCEEEEEeCCCCCCCCCCCCCCCCCCCCccCCCceeEEeccCCCCcccccc---eEEEEE---Ee
Q 007069 71 VTVEYSS---PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGK---GSLKLM---LI 141 (619)
Q Consensus 71 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 141 (619)
|+..|+- ..|+..||||||=-.-++. .-...|.|+... .+| ..|+ ..+.|+ |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543322 345788888642 244 4443 478886 44
Q ss_pred ec-ccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCC
Q 007069 142 NQ-RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGK 185 (619)
Q Consensus 142 n~-r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~ 185 (619)
+. =..|.|++... .-.++++|.|..|..|+ |.-.-+++.+
T Consensus 84 k~~~e~YqfcYv~~---~g~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQ---KGEVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECC---CccEEEecCCcccCCCC-ccccceeecc
Confidence 43 23588888763 23578899999998775 6555566654
No 134
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=85.90 E-value=5.5 Score=30.62 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.2
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007069 247 IHTSFLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 247 ~h~a~ltgL~P~t~Y~Yrvg~~ 268 (619)
.+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
No 135
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=82.66 E-value=28 Score=42.69 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=74.6
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeCCC------CCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC
Q 007069 131 TGKGSLKLMLINQRS--DFSVALFSGGL------LKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 202 (619)
Q Consensus 131 ~g~~~~~~~l~n~r~--~~~f~~f~~~~------~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~ 202 (619)
++.| +.+.+.|.-- -|.|+.-.-+. +.|..| + +.|..|.+ .=+..-.+.++.|+|..+.- .
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV--~-----t~pEgp~~-~~a~ats~~ti~v~WepP~~--~ 547 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKV--T-----TQPEGPVQ-LQAYATSPTTILVTWEPPPF--G 547 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCcccCCccCCceEE--e-----cCCCCCcc-ccccccCcceEEEEecCCCC--C
Confidence 4556 7777777554 57777655321 223222 2 23346666 33344568999999998752 2
Q ss_pred CccEEEEeecCCCCccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007069 203 AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 282 (619)
Q Consensus 203 ~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 282 (619)
..+...|..--... ...+...++ .--++.+|+||+|.|+|.|||......|.+.-|...+|
T Consensus 548 n~~I~~yk~~ys~~--~~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V 608 (1381)
T KOG4221|consen 548 NGPITGYKLFYSED--DTGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITV 608 (1381)
T ss_pred CCCceEEEEEEEcC--CCCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEE
Confidence 33555554210000 001111111 12467788999999999999998876777666788888
Q ss_pred EcCC
Q 007069 283 KASP 286 (619)
Q Consensus 283 ~T~p 286 (619)
+|..
T Consensus 609 ~Tls 612 (1381)
T KOG4221|consen 609 RTLS 612 (1381)
T ss_pred Eecc
Confidence 8863
No 136
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=82.23 E-value=3.9 Score=41.65 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeee
Q 007069 440 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 514 (619)
Q Consensus 440 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlvl~GH~H~YeRt~ 514 (619)
+.+.+++++++++ ++..++||+.|--..|.. ...+. .+.+...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888875 568899999996431211 11222 4456666667899999999999987654
No 137
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=81.35 E-value=2.8 Score=41.20 Aligned_cols=74 Identities=16% Similarity=0.269 Sum_probs=42.3
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCCCEEEEcCcccccCCch---------hHH-HHHH----H
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYI---------SQW-DQFT----A 358 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~---~~pDfVl~~GDi~y~~g~~---------~~w-d~f~----~ 358 (619)
|++++|.+.+.. ....+.++++++.. .+|+.+|++|+++...... ... ..+. +
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888887632 12245566666532 4699999999999753211 111 1222 2
Q ss_pred hhhhhhcCCCeEEccCCCccC
Q 007069 359 QIEPIASTVPYMIASGNHERD 379 (619)
Q Consensus 359 ~i~~l~~~vP~~~v~GNHD~~ 379 (619)
.++.+...+++..+||+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 334555688999999999975
No 138
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=80.82 E-value=3.6 Score=42.14 Aligned_cols=65 Identities=25% Similarity=0.454 Sum_probs=43.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCe--
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY-- 369 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~-- 369 (619)
.-.||+.++|.|.-..+ + ++.+.-|+.+|+||.. ..|...+-..|-+.+ .+.|+
T Consensus 60 ~~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT-~~g~~~ev~~fn~~~----gslph~y 115 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFT-NLGLPEEVIKFNEWL----GSLPHEY 115 (305)
T ss_pred CceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCc-cccCHHHHHhhhHHh----ccCccee
Confidence 34799999999864321 1 1347789999999999 445444334444433 34454
Q ss_pred -EEccCCCccCC
Q 007069 370 -MIASGNHERDW 380 (619)
Q Consensus 370 -~~v~GNHD~~~ 380 (619)
+++.||||...
T Consensus 116 KIVIaGNHELtF 127 (305)
T KOG3947|consen 116 KIVIAGNHELTF 127 (305)
T ss_pred eEEEeeccceee
Confidence 67999999864
No 139
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=76.90 E-value=48 Score=34.82 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=46.3
Q ss_pred CCCCCcceeeecCC---CCCcEEEEEEeCCCCCCCc-cEEEEeec-CCCCccccCcceEEecCCcCCCCCcc--c---c-
Q 007069 172 NPNAPVYPRLAQGK---TWNEMTVTWTSGYGINEAE-AFVQWGRK-GGDRTHSPAGTLTFDRGSMCGAPART--V---G- 240 (619)
Q Consensus 172 ~~~~P~~~~La~~~---~~~~m~V~W~t~~~~~~~~-~~V~yg~~-~~~~~~~~~~~~t~~~~~mc~~pa~~--~---g- 240 (619)
=|.-|.-..+-..+ .=++++|.|....+ .. ...-|... .+... ........++|..|-+. . .
T Consensus 171 ~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d---~~~kYCvy~~~~~~~~~----~~~~~~~~n~C~~~~sr~k~e~v~C 243 (300)
T PF10179_consen 171 YPQLPDDTSIKEFNKLRTCNSVTIAWLGSPD---RSIKYCVYRREEHSNYQ----ERSVSRMPNQCLGPESRKKSEKVLC 243 (300)
T ss_pred CCCCCCCCceeEEcCCcccceEEEEEecCCC---CCceEEEEEEEecCchh----hhhhcccCccCCCCCccccceEEEE
Confidence 34556665554333 23899999986432 22 33344322 11110 00112234567754321 1 1
Q ss_pred --ccCCC-------eEEEEEecCCCCCCEEEEEEeee
Q 007069 241 --WRDPG-------YIHTSFLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 241 --~~~~g-------~~h~a~ltgL~P~t~Y~Yrvg~~ 268 (619)
++.+. -+-..+|.||+||+.|-..|...
T Consensus 244 k~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 244 KYFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred EEEcCCccccccccccceeecccCCCCcEEEEEEEEe
Confidence 12211 12234799999999999998875
No 140
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=69.65 E-value=20 Score=37.30 Aligned_cols=76 Identities=9% Similarity=0.071 Sum_probs=48.5
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC-------CCCEEEEcCcccccC-----CchhHHHHHHHh
Q 007069 292 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK-------NIDIVFHIGDICYAN-----GYISQWDQFTAQ 359 (619)
Q Consensus 292 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~-------~pDfVl~~GDi~y~~-----g~~~~wd~f~~~ 359 (619)
...+|+++||.+.+. +..++.++.+.+..+ -|-.+|+.|+.+... .....+.+.++.
T Consensus 26 ~~~~~VilSDV~LD~-----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~ 94 (291)
T PTZ00235 26 KRHNWIIMHDVYLDS-----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEK 94 (291)
T ss_pred CceEEEEEEeeccCC-----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHH
Confidence 347899999999874 334555555555432 288999999988542 112223333333
Q ss_pred hh--------hhhcCCCeEEccCCCcc
Q 007069 360 IE--------PIASTVPYMIASGNHER 378 (619)
Q Consensus 360 i~--------~l~~~vP~~~v~GNHD~ 378 (619)
+. .+..+.-++.+||-.|-
T Consensus 95 La~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 95 LSVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHHHHHhChHHHhcCeEEEECCCCCC
Confidence 32 24556778999999996
No 141
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.60 E-value=22 Score=39.12 Aligned_cols=70 Identities=9% Similarity=0.247 Sum_probs=47.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEcc
Q 007069 294 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 373 (619)
Q Consensus 294 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 373 (619)
.|+++.||..... ...++.++.+-++....|+++.+|++.-.+....+|..+.+-...+ .+|.|+.-
T Consensus 6 ~kILv~Gd~~Gr~-----------~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY~~g 72 (528)
T KOG2476|consen 6 AKILVCGDVEGRF-----------DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTYFLG 72 (528)
T ss_pred ceEEEEcCccccH-----------HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEEEec
Confidence 5899999984321 1234455555555566999999999996555566666666554433 67888776
Q ss_pred CCC
Q 007069 374 GNH 376 (619)
Q Consensus 374 GNH 376 (619)
+|-
T Consensus 73 ~~~ 75 (528)
T KOG2476|consen 73 DNA 75 (528)
T ss_pred CCC
Confidence 665
No 142
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=49.43 E-value=44 Score=33.98 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=37.7
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC--CCEEEEcCcccccCCchhHHHHHHHhhh-hhhcCCCeEEc
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIE-PIASTVPYMIA 372 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~--pDfVl~~GDi~y~~g~~~~wd~f~~~i~-~l~~~vP~~~v 372 (619)
+.+.||+|.. ..-+..+.+--.. -.=-+++||.+ +.|+.+. +.|+=.+. ++.-.--+..+
T Consensus 45 vtvcGDIHGQ---------------f~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQ---------------FYDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccch---------------HHHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHHHHHhhcCcceeEEe
Confidence 6789999853 1224444442111 22467899999 5565442 34433221 12223456789
Q ss_pred cCCCccC
Q 007069 373 SGNHERD 379 (619)
Q Consensus 373 ~GNHD~~ 379 (619)
.||||-+
T Consensus 108 RGNHEsR 114 (303)
T KOG0372|consen 108 RGNHESR 114 (303)
T ss_pred eccchhh
Confidence 9999975
No 143
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=48.05 E-value=25 Score=37.50 Aligned_cols=23 Identities=17% Similarity=0.403 Sum_probs=20.0
Q ss_pred hHHHHHHHHHhcCCeEEEecCcc
Q 007069 486 GRESLQKLWQKYKVDIAIYGHVH 508 (619)
Q Consensus 486 ~r~~l~~ll~k~~Vdlvl~GH~H 508 (619)
+.+.+++++++.++|+++-||.=
T Consensus 232 g~~~v~~f~~~~~ldlivRaHqv 254 (331)
T KOG0374|consen 232 GPAVVEDFCKKLDLDLIVRAHQV 254 (331)
T ss_pred cHHHHHHHHHHhCcceEEEcCcc
Confidence 46788999999999999999963
No 144
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=40.90 E-value=44 Score=34.44 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=34.6
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCe-EEEecCccc
Q 007069 441 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD-IAIYGHVHN 509 (619)
Q Consensus 441 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd-lvl~GH~H~ 509 (619)
-++|+.+|+...+-..| ++-.|.| + ..+ .+.+.+|+++++.| ||++||+-.
T Consensus 114 ~~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 114 PEYLRKCLKLYKKIGVP--VVGIHCK-----------E----KEM-PEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHHhCCc--eEEEEec-----------c----hhc-hHHHHHHHHHhCCCEEEEeCchhh
Confidence 35799999876544444 3333332 1 122 56889999999999 689999954
No 145
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=37.95 E-value=41 Score=28.82 Aligned_cols=36 Identities=19% Similarity=0.061 Sum_probs=21.4
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEE
Q 007069 248 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFK 283 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~ 283 (619)
-.++|.+|+|++.|.-+|.... .+....||+..-.+
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~~~~~~~~~s~~S~~~C~~ 104 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQAFSPSQNKNSQPSEPQCIT 104 (106)
T ss_dssp EEEEEES--TTSEEEEEEEEEECSSTEEEEEBSEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEEEeccCCCcCCCCCCEeEe
Confidence 3467999999999999998621 12223455554433
No 146
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=35.93 E-value=62 Score=33.60 Aligned_cols=51 Identities=22% Similarity=0.411 Sum_probs=34.5
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCe-EEEecCccc
Q 007069 441 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD-IAIYGHVHN 509 (619)
Q Consensus 441 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd-lvl~GH~H~ 509 (619)
-+.|+.+|+...+-..| +.-.|.| + ..+ -+.+..|+++++.| |||+||+-.
T Consensus 115 ~~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 115 EEYLNKCLKVYKQLGIP--AVGIHVP-----------E----KEQ-PEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHHcCCc--eEEEEec-----------h----HHh-hHHHHHHHHHcCCCEEEEeCchhh
Confidence 35799999876444444 2233332 1 122 56889999999999 689999874
No 147
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=31.69 E-value=1.4e+02 Score=31.34 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=16.9
Q ss_pred EEEEecCCCCCCEEEEEEeee
Q 007069 248 HTSFLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 248 h~a~ltgL~P~t~Y~Yrvg~~ 268 (619)
-.-+|.+|+|+|+||+.|..-
T Consensus 15 t~~t~~~L~p~t~YyfdVF~v 35 (300)
T PF10179_consen 15 TNQTLSGLKPDTTYYFDVFVV 35 (300)
T ss_pred ceEEeccCCCCCeEEEEEEEE
Confidence 445678999999999998743
No 148
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.11 E-value=74 Score=27.45 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=20.3
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGH 267 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~ 267 (619)
.+-+.++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 356788899999999999999953
No 149
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=28.54 E-value=1.3e+02 Score=30.85 Aligned_cols=66 Identities=23% Similarity=0.263 Sum_probs=36.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-CCCC-EEEEcCcccccCCchhHHHHHHHhhhhhh--cCCCeEE
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-KNID-IVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYMI 371 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~-~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~~ 371 (619)
+.+.||.|..- .-+.++.+.- ..|| -.++.||.+ +.|+.+ ++-...+-.+. -.--+-.
T Consensus 62 vtvcGDvHGqf---------------~dl~ELfkiGG~~pdtnylfmGDyv-drGy~S--vetVS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQF---------------HDLIELFKIGGLAPDTNYLFMGDYV-DRGYYS--VETVSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchhH---------------HHHHHHHHccCCCCCcceeeeeeec-ccccch--HHHHHHHHHhhccccceeEE
Confidence 67899998541 2234444421 2244 367789999 556544 22222222211 1234567
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
++||||..
T Consensus 124 lrGNHEsr 131 (319)
T KOG0371|consen 124 LRGNHESR 131 (319)
T ss_pred ecCchHHH
Confidence 99999964
No 150
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=27.78 E-value=6.8e+02 Score=31.01 Aligned_cols=131 Identities=11% Similarity=0.122 Sum_probs=72.3
Q ss_pred eEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007069 134 GSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 211 (619)
Q Consensus 134 ~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 211 (619)
|-|+++=+.++. .|.++.-+..-+. . +..+.+--.-|.+|..+++.- -..+.++|+|.-+.+ +..|...|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~~Ds~-s--~~A~l~V~gpPgpP~~v~~~~-i~~t~~~lsW~~g~d--n~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTALDSA-S--ARADLLVRGPPGPPPDVHVDD-ISDTTARLSWSPGSD--NNSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEeecch-h--cccceEEecCCCCCCceeEee-eccceEEEEeecCCC--CCCCceEEeE
Confidence 446666666665 5766665521111 0 111111123456788777632 236899999998865 2356888875
Q ss_pred cCCC----CccccCcceEEecCCcCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007069 212 KGGD----RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASP 286 (619)
Q Consensus 212 ~~~~----~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p 286 (619)
.... .|..++ +. |. .+.|- +.++..+|.|-..|.+||..-..-|.+.=|. .-..+|.+
T Consensus 651 q~rt~~~~~W~~v~-~v----------p~-----~~~~~-~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~e 713 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-TV----------PG-----NITGD-ESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPE 713 (1051)
T ss_pred EecCCCCCcceEee-EC----------CC-----cccCc-cceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCC
Confidence 4322 222211 11 11 12344 6799999999999999998653222221122 23456665
Q ss_pred C
Q 007069 287 Y 287 (619)
Q Consensus 287 ~ 287 (619)
+
T Consensus 714 a 714 (1051)
T KOG3513|consen 714 A 714 (1051)
T ss_pred C
Confidence 4
No 151
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=27.27 E-value=59 Score=32.47 Aligned_cols=66 Identities=26% Similarity=0.431 Sum_probs=36.1
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC-CC-EEEEcCcccccCCchhHHHHHHHhhhhhhcCCC--eEE
Q 007069 296 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN-ID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YMI 371 (619)
Q Consensus 296 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~i~~~~~~-pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP--~~~ 371 (619)
+-+-||+|.. .--+.++.+.-.. || --|+.||.+ +.|+.+ .+.|. .+--+..+.| +-.
T Consensus 48 VTvCGDIHGQ---------------FyDL~eLFrtgG~vP~tnYiFmGDfV-DRGyyS-LEtfT-~l~~LkaryP~~ITL 109 (306)
T KOG0373|consen 48 VTVCGDIHGQ---------------FYDLLELFRTGGQVPDTNYIFMGDFV-DRGYYS-LETFT-LLLLLKARYPAKITL 109 (306)
T ss_pred eeEeeccchh---------------HHHHHHHHHhcCCCCCcceEEecccc-cccccc-HHHHH-HHHHHhhcCCceeEE
Confidence 5688999743 1224444443111 33 246789999 556543 12333 2222333333 556
Q ss_pred ccCCCccC
Q 007069 372 ASGNHERD 379 (619)
Q Consensus 372 v~GNHD~~ 379 (619)
+.||||-+
T Consensus 110 lRGNHEsR 117 (306)
T KOG0373|consen 110 LRGNHESR 117 (306)
T ss_pred eeccchhh
Confidence 89999965
No 152
>TIGR02039 CysD sulfate adenylyltransferase, small subunit. In Escherichia coli, ATP sulfurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulfur-containing amino acids. Homologous to this E.coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulfurase and APS kinase activity, yet are involved in Nod factor sulfation, and sulfation of other macromolecules.
Probab=26.86 E-value=2.1e+02 Score=30.07 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=43.0
Q ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeeccccCCCCccccCCCCCCchhhHHHHHHHHHhcCCeEE
Q 007069 423 FRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIA 502 (619)
Q Consensus 423 v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlv 502 (619)
+.++.+||...| .+-+++.++.-+.. +.+.+|+.....+.+....+..........+-++.|...+.++++|++
T Consensus 50 ~~vl~IDTG~~F---~Et~efrd~~a~~~---gl~l~v~~~~~~~~~g~~~~~~~~~~~c~vlK~~pL~~al~e~g~da~ 123 (294)
T TIGR02039 50 FPLLHVDTGWKF---REMIAFRDHMVAKY---GLRLIVHSNEEGIADGINPFTEGSALHTDIMKTEALRQALDKNQFDAA 123 (294)
T ss_pred eEEEEEecCCCC---HHHHHHHHHHHHHh---CCCEEEEechhhhhcCccccccChHHHhhHHHHHHHHHHHHHcCCCEE
Confidence 567888998765 36777776655543 344333211111111111110000001112224678888899999999
Q ss_pred EecCccc
Q 007069 503 IYGHVHN 509 (619)
Q Consensus 503 l~GH~H~ 509 (619)
|.||.=.
T Consensus 124 itG~RRD 130 (294)
T TIGR02039 124 FGGARRD 130 (294)
T ss_pred EecCChh
Confidence 9999644
No 153
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=26.70 E-value=3.2e+02 Score=23.56 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCCeEEEecCccc
Q 007069 487 RESLQKLWQKYKVDIAIYGHVHN 509 (619)
Q Consensus 487 r~~l~~ll~k~~Vdlvl~GH~H~ 509 (619)
.+.+....+++++|+++-|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46778888999999998888754
No 154
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=25.66 E-value=1e+02 Score=29.23 Aligned_cols=18 Identities=17% Similarity=0.119 Sum_probs=14.8
Q ss_pred EecCCCCCCEEEEEEeee
Q 007069 251 FLKELWPNAMYTYKVGHR 268 (619)
Q Consensus 251 ~ltgL~P~t~Y~Yrvg~~ 268 (619)
.+++|.|||+|+.+.-..
T Consensus 105 qVtNL~pGTkY~isY~Vt 122 (184)
T PF07353_consen 105 QVTNLQPGTKYYISYLVT 122 (184)
T ss_pred EeeccCCCcEEEEEEEEe
Confidence 479999999998777654
No 155
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=25.02 E-value=96 Score=25.68 Aligned_cols=21 Identities=10% Similarity=0.162 Sum_probs=18.1
Q ss_pred CeEEEEEecCCCCCCEEEEEEe
Q 007069 245 GYIHTSFLKELWPNAMYTYKVG 266 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg 266 (619)
+-++++++.++ +|..|.|++.
T Consensus 39 ~G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 39 DGWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred CcEEEEEeCCC-CCCeEEEEEC
Confidence 34678899999 9999999996
No 156
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.66 E-value=95 Score=26.52 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=20.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007069 244 PGYIHTSFLKELWPNAMYTYKVGH 267 (619)
Q Consensus 244 ~g~~h~a~ltgL~P~t~Y~Yrvg~ 267 (619)
.+-++++.+.++.+|..|.|++..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 355788899999999999999964
No 157
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.61 E-value=91 Score=27.62 Aligned_cols=22 Identities=32% Similarity=0.694 Sum_probs=19.7
Q ss_pred CeEEEEEecCCCCCCEEEEEEe
Q 007069 245 GYIHTSFLKELWPNAMYTYKVG 266 (619)
Q Consensus 245 g~~h~a~ltgL~P~t~Y~Yrvg 266 (619)
+-++++.+.++.+|+.|-|+|.
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~ 69 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVD 69 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEEC
Confidence 4578899999999999999996
No 158
>PF00879 Defensin_propep: Defensin propeptide The pattern for this Prosite entry doesn't match the propeptide.; InterPro: IPR002366 Defensins are 2-6 kDa, cationic, microbicidal peptides active against many Gram-negative and Gram-positive bacteria, fungi, and enveloped viruses [], containing three pairs of intramolecular disulphide bonds []. On the basis of their size and pattern of disulphide bonding, mammalian defensins are classified into alpha, beta and theta categories. Alpha-defensins, which have been identified in humans, monkeys and several rodent species, are particularly abundant in neutrophils, certain macrophage populations and Paneth cells of the small intestine. Every mammalian species explored thus far has beta-defensins. In cows, as many as 13 beta-defensins exist in neutrophils. However, in other species, beta-defensins are more often produced by epithelial cells lining various organs (e.g. the epidermis, bronchial tree and genitourinary tract). Theta-defensins are cyclic and have so far only been identified in primate phagocytes. Defensins are produced constitutively and/or in response to microbial products or proinflammatory cytokines. Some defensins are also called corticostatins (CS) because they inhibit corticotropin-stimulated corticosteroid production. The mechanism(s) by which microorganisms are killed and/or inactivated by defensins is not understood completely. However, it is generally believed that killing is a consequence of disruption of the microbial membrane. The polar topology of defensins, with spatially separated charged and hydrophobic regions, allows them to insert themselves into the phospholipid membranes so that their hydrophobic regions are buried within the lipid membrane interior and their charged (mostly cationic) regions interact with anionic phospholipid head groups and water. Subsequently, some defensins can aggregate to form `channel-like' pores; others might bind to and cover the microbial membrane in a `carpet-like' manner. The net outcome is the disruption of membrane integrity and function, which ultimately leads to the lysis of microorganisms. Some defensins are synthesized as propeptides which may be relevant to this process - in neutrophils only the mature peptides have been identified but in Paneth cells, the propeptide is stored in vesicles [] and appears to be cleaved by trypsin on activation. ; GO: 0006952 defense response
Probab=23.06 E-value=1.7e+02 Score=22.48 Aligned_cols=16 Identities=13% Similarity=0.391 Sum_probs=11.2
Q ss_pred cCccccEEEEEEeCCC
Q 007069 64 KGQNSEWVTVEYSSPN 79 (619)
Q Consensus 64 ~~~~~~~v~~~~~~~~ 79 (619)
-|.+.+-|.|++.|..
T Consensus 35 pg~edQdv~ISf~~~e 50 (52)
T PF00879_consen 35 PGAEDQDVSISFAGDE 50 (52)
T ss_pred cCccCCcEEEEecCCC
Confidence 3555577999998853
No 159
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=20.75 E-value=63 Score=37.19 Aligned_cols=50 Identities=28% Similarity=0.423 Sum_probs=30.3
Q ss_pred HHHHHHhcCCCCEEEEcCcccccCCchhHHHHHHHhhhhhhcCCCeEEccCCCccCC
Q 007069 324 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDW 380 (619)
Q Consensus 324 ~~~i~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHD~~~ 380 (619)
+..+++. --+|-+-++|||. ++|... |.-++.+ ...--+=+-+||||.-|
T Consensus 176 l~~lIqr-L~VDhLHIvGDIy-DRGp~p--d~ImD~L---m~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQR-LAVDHLHIVGDIY-DRGPRP--DKIMDRL---MNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHH-Hhhhheeeccccc-CCCCCh--hHHHHHH---hcCCCccccccchHHHH
Confidence 3344443 3588899999999 455433 3444433 33333446899999765
Done!