Query 007071
Match_columns 619
No_of_seqs 105 out of 122
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 16:24:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007071.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007071hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lb3a_ a.25.1.1 (A:) (Apo)fer 57.2 34 0.0025 29.7 10.4 102 491-592 49-153 (179)
2 d1rcda_ a.25.1.1 (A:) (Apo)fer 46.7 45 0.0033 28.5 9.3 103 491-593 49-154 (171)
3 d2efka1 a.238.1.4 (A:10-288) C 42.1 1E+02 0.0076 26.6 12.7 34 481-514 12-45 (279)
4 d1vh6a_ a.24.19.1 (A:) Flagell 35.6 81 0.0059 24.8 8.5 75 507-590 12-95 (102)
5 d2elba1 a.238.1.1 (A:6-273) DC 32.7 1.3E+02 0.0094 26.5 10.5 47 525-573 69-115 (268)
6 d1ab4a_ e.11.1.1 (A:) DNA Gyra 29.5 2.5E+02 0.018 27.8 13.0 42 452-494 319-360 (493)
7 d1s3qa1 a.25.1.1 (A:3-164) Non 25.3 1.7E+02 0.013 24.1 10.2 101 491-592 42-144 (162)
8 d1fxkc_ a.2.5.1 (C:) Prefoldin 24.0 1.7E+02 0.012 23.5 8.7 11 516-526 50-60 (133)
9 d2oh3a1 a.25.1.8 (A:3-154) Unc 22.6 1.7E+02 0.012 22.9 10.5 98 491-589 39-146 (152)
10 d1krqa_ a.25.1.1 (A:) Non-hem 22.2 1.8E+02 0.013 24.3 8.9 101 491-592 42-144 (165)
11 d1r03a_ a.25.1.1 (A:) (Apo)fer 21.1 2.2E+02 0.016 23.8 10.2 101 491-592 49-153 (171)
12 d3bzka3 a.294.1.1 (A:1-324) Tr 20.7 1.6E+02 0.011 27.8 8.9 27 415-441 53-79 (324)
No 1
>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.16 E-value=34 Score=29.68 Aligned_cols=102 Identities=15% Similarity=0.168 Sum_probs=74.3
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-HHHHH-H
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMN-SLTAE-L 568 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~-~lvSE-L 568 (619)
|+...+.=|.+|+.-|..-+..+.....--++...-..+..++.+++..|++.=..+...+..+...+++.. ....+ |
T Consensus 49 ~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~~~~~~~~~~~~~~~~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~~fL 128 (179)
T d1lb3a_ 49 FFRELAEEKREGAERLLEFQNDRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARADPHLCDFL 128 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCCCCCCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Confidence 445557778889999988888888765433333333344457889999999999999999999999887754 55556 5
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhh
Q 007071 569 -MSVTAKEMALLEQCKDFSSTLSAL 592 (619)
Q Consensus 569 -a~Va~qE~~lLeEC~eLL~~~a~L 592 (619)
.....++...+.++.++|..+..+
T Consensus 129 ~~~fl~eQ~e~~~~l~~~l~~l~ri 153 (179)
T d1lb3a_ 129 ESHYLDKEVKLIKKMGNHLTNLRRV 153 (179)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346666667788888888777655
No 2
>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}
Probab=46.67 E-value=45 Score=28.54 Aligned_cols=103 Identities=15% Similarity=0.196 Sum_probs=73.7
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-HHHHH-H
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMN-SLTAE-L 568 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~-~lvSE-L 568 (619)
++...+.=|.+|+.-|..-+..+-....--++..--+.+..++.+++..|++.=+.+...+..+.-.+++.. ....+ |
T Consensus 49 ~f~~~s~EE~~Ha~~l~~yi~~rgg~~~~~~i~~~~~~~~~s~~e~~~~al~~Ek~v~~~l~~l~~~a~~~~D~~~~~fl 128 (171)
T d1rcda_ 49 FFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFL 128 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCceecccCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 455557778889988888887776654322222222234457999999999999999999999988887654 45666 4
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHhhH
Q 007071 569 M-SVTAKEMALLEQCKDFSSTLSALQ 593 (619)
Q Consensus 569 a-~Va~qE~~lLeEC~eLL~~~a~Lq 593 (619)
- ....++...+.++.++|..+..+-
T Consensus 129 e~~fl~eQ~e~~~~l~~~l~~l~~~~ 154 (171)
T d1rcda_ 129 ESPYLSESVETIKKLGDHITSLKKLW 154 (171)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 366666678888888888877664
No 3
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.07 E-value=1e+02 Score=26.63 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=27.6
Q ss_pred HHhHHhhcccChhhHHhhhhhhhhhHHHHHHHHH
Q 007071 481 LTSILKGQFPYLEEWALLDKDHTNSLLGATEALK 514 (619)
Q Consensus 481 L~~IL~~Qm~~LEeW~~LE~ehsssLs~a~eaL~ 514 (619)
-..+|+.-+.||.+=+.||.+|+-.|..+..-+.
T Consensus 12 g~~~~~~~~~~~~eRa~iE~~Yak~L~kL~~~~~ 45 (279)
T d2efka1 12 GLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYL 45 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3446677778999999999999999999876643
No 4
>d1vh6a_ a.24.19.1 (A:) Flagellar export chaperone FliS {Bacillus subtilis [TaxId: 1423]}
Probab=35.58 E-value=81 Score=24.85 Aligned_cols=75 Identities=7% Similarity=0.209 Sum_probs=48.6
Q ss_pred HHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHH---------HHHHHH
Q 007071 507 LGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSV---------TAKEMA 577 (619)
Q Consensus 507 s~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~V---------a~qE~~ 577 (619)
.++++.|+.+..-+. ..|.+.-.+++..|.+++.++..++.. -.++..-+.+|=.- .....+
T Consensus 12 d~~i~~l~~a~~ai~-----~~d~~~~~~~~~ka~~Ii~~L~~sLd~----~geiA~nL~~LY~y~~~~L~~a~~~~d~~ 82 (102)
T d1vh6a_ 12 NGCLKFIRLAAQAIE-----NDDMERKNENLIKAQNIIQELNFTLNR----NIELSASMGAMYDYMYRRLVQANIKNDTG 82 (102)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHHHHHHHhcccC----ChHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 455555554443332 468899999999999999999998863 14554444444222 233445
Q ss_pred HHHHHHHHHHHHH
Q 007071 578 LLEQCKDFSSTLS 590 (619)
Q Consensus 578 lLeEC~eLL~~~a 590 (619)
.|++|.++|..+.
T Consensus 83 ~l~~v~~~l~~l~ 95 (102)
T d1vh6a_ 83 MLAEVEGYVTDFR 95 (102)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888887664
No 5
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.74 E-value=1.3e+02 Score=26.52 Aligned_cols=47 Identities=11% Similarity=0.202 Sum_probs=30.3
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHH
Q 007071 525 KAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTA 573 (619)
Q Consensus 525 GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~ 573 (619)
|+-.|-..+..+|..-.+.+.+|......++-.++. .++.-|.....
T Consensus 69 ~~~~dd~~~~~~l~~f~~~~~el~~~~~~l~~~~~~--~~~~pL~~f~~ 115 (268)
T d2elba1 69 PLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLAD--AMMFPITQFKE 115 (268)
T ss_dssp C-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTHHHHHHHTT
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 334465668899999999999999988888887763 34444444443
No 6
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=29.45 E-value=2.5e+02 Score=27.85 Aligned_cols=42 Identities=19% Similarity=0.145 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhh
Q 007071 452 WNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEE 494 (619)
Q Consensus 452 y~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEe 494 (619)
..+-..-.+.|..+-.||.+.++.+.+.+| .||+.++..++.
T Consensus 319 ~eIL~~f~~~R~e~~~kR~~y~L~kle~rl-~iL~g~~~~i~~ 360 (493)
T d1ab4a_ 319 KDIIAAFVRHRREVVTRRTIFELRKARDRA-HILEALAVALAN 360 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 334445567788888899988888888877 667777766643
No 7
>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.28 E-value=1.7e+02 Score=24.10 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=66.2
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH-HHHH-H
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNS-LTAE-L 568 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~-lvSE-L 568 (619)
|+..++.=|.+|+.-+..-+..+-.... ++-...-..+..++.+++..+++.=..+...+..+.-.+++... .... |
T Consensus 42 ~f~~~s~eE~~Ha~~l~~yl~~rgg~~~-~~~i~~p~~~~~~~~~~l~~~l~~E~~v~~~l~~l~~~a~~~~D~~t~~fl 120 (162)
T d1s3qa1 42 WMRVQWQEELMHAMKMFDFVSERGGRVK-LYAVEEPPSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFL 120 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCC-CCCBCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcc-cCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHhHHHHH
Confidence 5666777888899888888777765543 32223334566688899999988888888888777766655322 2222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 007071 569 MSVTAKEMALLEQCKDFSSTLSAL 592 (619)
Q Consensus 569 a~Va~qE~~lLeEC~eLL~~~a~L 592 (619)
-.....+...+.++.++|..+..+
T Consensus 121 ~~~l~eQ~e~~~~l~~~l~~l~~~ 144 (162)
T d1s3qa1 121 QWYVAEQVEEEASALDIVEKLRLI 144 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455666777777777766554
No 8
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.98 E-value=1.7e+02 Score=23.49 Aligned_cols=11 Identities=27% Similarity=0.262 Sum_probs=8.5
Q ss_pred cccccccCCCc
Q 007071 516 STLRLPVVGKA 526 (619)
Q Consensus 516 atlRLPv~~GA 526 (619)
....+|+++|+
T Consensus 50 ~e~lvplg~~~ 60 (133)
T d1fxkc_ 50 SETLVPVGAGS 60 (133)
T ss_dssp CEEEEEEETTE
T ss_pred CeEEEEcCCce
Confidence 35679999886
No 9
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}
Probab=22.61 E-value=1.7e+02 Score=22.95 Aligned_cols=98 Identities=11% Similarity=-0.002 Sum_probs=52.4
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhccccc-ccCC---------CcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRL-PVVG---------KAIADVQNLKDAISSALDVMQAMASSICLLSSKVEN 560 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRL-Pv~~---------GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee 560 (619)
.+..-+.-|.+|...+..+++.+.....-. +..+ .......++.++|..|++.=+.....-..+..++++
T Consensus 39 ~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~~~~d 118 (152)
T d2oh3a1 39 VFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSAD 118 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhccccchhHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 356668888889888877777765432211 1100 111222346666666655443333333333333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007071 561 MNSLTAELMSVTAKEMALLEQCKDFSSTL 589 (619)
Q Consensus 561 ~~~lvSELa~Va~qE~~lLeEC~eLL~~~ 589 (619)
..+-.-+..++..|+.-++.-+++|..+
T Consensus 119 -~~~r~~~~~l~~~E~~H~~~l~~~l~~~ 146 (152)
T d2oh3a1 119 -PEVKRLGADFAAEEAEHVVALDKWIEKT 146 (152)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1123334667778888888777777655
No 10
>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]}
Probab=22.23 E-value=1.8e+02 Score=24.25 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=68.5
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hHHHH-HH
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENM-NSLTA-EL 568 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~-~~lvS-EL 568 (619)
|+...+.=|.+|+.-|..-+..+.....--++ .....+..++.+++..|++.=..+...+..+.-.+++. +.... =|
T Consensus 42 ~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i-~~p~~~~~~~~~~l~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl 120 (165)
T d1krqa_ 42 FLFAHASEESDHAKKLITYLNETDSHVELQEV-KQPEQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFL 120 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCC-CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHT
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCCccCcc-ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 33444666778888777777666554432222 23345666899999999998888888888888777664 22222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 007071 569 MSVTAKEMALLEQCKDFSSTLSAL 592 (619)
Q Consensus 569 a~Va~qE~~lLeEC~eLL~~~a~L 592 (619)
-....++...+.++.++|..+..+
T Consensus 121 ~~fl~eQ~e~~~~~~~~l~~l~~~ 144 (165)
T d1krqa_ 121 QWYVSEQHEEEALFRGIVDKIKLI 144 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777778888888888887654
No 11
>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]}
Probab=21.13 E-value=2.2e+02 Score=23.78 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=63.4
Q ss_pred ChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCccc-chHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hHHHHHH
Q 007071 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIA-DVQNLKDAISSALDVMQAMASSICLLSSKVENM-NSLTAEL 568 (619)
Q Consensus 491 ~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAka-D~~slk~AL~sAvdvMq~i~ssi~~llpKvee~-~~lvSEL 568 (619)
|+...+.=|.+|+.-|..-+-.+..... ++-..-... +..++.+++..|++.=..+...|..+.-.+++. +....+.
T Consensus 49 ~f~~~a~EE~~Ha~~l~~yi~~rgg~~~-~~~i~~~~~~~~~s~~~~~~~~l~~E~~vt~~i~~l~~~a~~~~D~~t~~f 127 (171)
T d1r03a_ 49 YFLHQSREETEHAEKLMRLQNQRGGRIR-LQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDF 127 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCC-CCCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4455577788888877777766655543 333333233 356788899888888777777777777666543 3334443
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHhh
Q 007071 569 M--SVTAKEMALLEQCKDFSSTLSAL 592 (619)
Q Consensus 569 a--~Va~qE~~lLeEC~eLL~~~a~L 592 (619)
- ..+.++...+++..++|..+..+
T Consensus 128 le~~fl~eQ~e~~~~l~~~l~~l~~i 153 (171)
T d1r03a_ 128 LETYYLNEQVKSIKELGDHVHNLVKM 153 (171)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 24555556666677777666655
No 12
>d3bzka3 a.294.1.1 (A:1-324) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.66 E-value=1.6e+02 Score=27.79 Aligned_cols=27 Identities=30% Similarity=0.381 Sum_probs=20.9
Q ss_pred hhhhhhhhhcchhhHHHHHHhHHHHHH
Q 007071 415 DAHMLRLLHNRYLQWRFVNARADATFM 441 (619)
Q Consensus 415 d~HqLRLLhNRlLQWRFaNARAeaa~~ 441 (619)
|..+||-++.+|-.|+=++.|.+..+.
T Consensus 53 de~~lr~i~~~~~~~~~L~~rk~~il~ 79 (324)
T d3bzka3 53 DDTQLRMLEERLRYLRELEERRGAILA 79 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666788888888888888887777664
Done!